HEADER HYDROLASE 16-MAR-09 3A0F TITLE THE CRYSTAL STRUCTURE OF GEOTRICHUM SP. M128 XYLOGLUCANASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: XYLOGLUCANASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES IN UNP 21-776; COMPND 5 SYNONYM: XYLOGLUCAN-SPECIFIC ENDO-BETA-1,4-GLUCANASE; COMPND 6 EC: 3.2.1.151; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GEOTRICHUM SP. M128; SOURCE 3 ORGANISM_TAXID: 203496; SOURCE 4 GENE: XEG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS (DE3) RP; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET14-B KEYWDS BETA-PROPELLER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.YAOI,H.KONDO,A.HIYOSHI,N.NORO,H.SUGIMOTO,S.TSUDA,K.MIYAZAKI REVDAT 2 01-NOV-23 3A0F 1 SEQADV REVDAT 1 08-SEP-09 3A0F 0 JRNL AUTH K.YAOI,H.KONDO,A.HIYOSHI,N.NORO,H.SUGIMOTO,S.TSUDA, JRNL AUTH 2 K.MIYAZAKI JRNL TITL THE CRYSTAL STRUCTURE OF A XYLOGLUCAN-SPECIFIC JRNL TITL 2 ENDO-BETA-1,4-GLUCANASE FROM GEOTRICHUM SP. M128 JRNL TITL 3 XYLOGLUCANASE REVEALS A KEY AMINO ACID RESIDUE FOR SUBSTRATE JRNL TITL 4 SPECIFICITY JRNL REF FEBS J. V. 276 5094 2009 JRNL REFN ISSN 1742-464X JRNL PMID 19682300 JRNL DOI 10.1111/J.1742-4658.2009.07205.X REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 41246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2139 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2738 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 144 REMARK 3 BIN FREE R VALUE : 0.2960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5676 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 107 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.19000 REMARK 3 B22 (A**2) : 0.19000 REMARK 3 B33 (A**2) : -0.29000 REMARK 3 B12 (A**2) : 0.10000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.341 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.264 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.190 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.154 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.882 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.847 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5845 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7993 ; 1.642 ; 1.929 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 752 ; 7.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 247 ;34.386 ;24.008 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 820 ;19.098 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;23.064 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 844 ; 0.130 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4596 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2667 ; 0.222 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3889 ; 0.312 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 314 ; 0.152 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.183 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.238 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3796 ; 0.673 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5930 ; 1.121 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2475 ; 1.680 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2063 ; 2.423 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3A0F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-MAR-09. REMARK 100 THE DEPOSITION ID IS D_1000028654. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43425 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.19900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1SQJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES, 6% PEG 8000, PH 5.8, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.93000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.96500 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.96500 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 79.93000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 VAL A 1 REMARK 465 THR A 2 REMARK 465 THR A 756 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 609 OG SER A 613 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 32 NE - CZ - NH1 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG A 32 NE - CZ - NH2 ANGL. DEV. = 4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 11 98.05 83.87 REMARK 500 ASN A 79 87.91 -150.88 REMARK 500 ASP A 104 42.55 -146.20 REMARK 500 GLU A 129 100.17 71.45 REMARK 500 TRP A 137 95.48 -169.00 REMARK 500 GLN A 148 33.55 -144.16 REMARK 500 ASN A 277 9.40 -150.12 REMARK 500 ASN A 308 -77.56 -128.76 REMARK 500 ASN A 326 110.68 -31.22 REMARK 500 PHE A 376 -120.58 57.02 REMARK 500 ASN A 378 42.24 -109.24 REMARK 500 ALA A 408 -35.38 -139.80 REMARK 500 GLU A 432 124.44 -38.39 REMARK 500 ASP A 458 -22.80 55.06 REMARK 500 ASP A 547 -38.52 -38.02 REMARK 500 VAL A 591 -54.22 -121.60 REMARK 500 LYS A 617 -139.59 -132.40 REMARK 500 CYS A 624 -60.15 -128.65 REMARK 500 SER A 668 -89.12 -139.29 REMARK 500 ALA A 685 -178.80 -66.95 REMARK 500 ASN A 717 -158.55 -98.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 127 GLY A 128 -118.80 REMARK 500 ALA A 290 ASN A 291 146.05 REMARK 500 PRO A 622 CYS A 623 -148.32 REMARK 500 REMARK 500 REMARK: NULL DBREF 3A0F A 1 756 UNP Q764N8 Q764N8_9ASCO 21 776 SEQADV 3A0F MET A -6 UNP Q764N8 EXPRESSION TAG SEQADV 3A0F HIS A -5 UNP Q764N8 EXPRESSION TAG SEQADV 3A0F HIS A -4 UNP Q764N8 EXPRESSION TAG SEQADV 3A0F HIS A -3 UNP Q764N8 EXPRESSION TAG SEQADV 3A0F HIS A -2 UNP Q764N8 EXPRESSION TAG SEQADV 3A0F HIS A -1 UNP Q764N8 EXPRESSION TAG SEQADV 3A0F HIS A 0 UNP Q764N8 EXPRESSION TAG SEQRES 1 A 763 MET HIS HIS HIS HIS HIS HIS VAL THR ALA GLU LEU LYS SEQRES 2 A 763 PRO VAL THR ILE SER GLY GLY GLY PHE ILE SER GLY LEU SEQRES 3 A 763 VAL ALA HIS PRO THR GLU LYS ASP LEU ILE TYR ALA ARG SEQRES 4 A 763 THR ASP ILE GLY GLY THR TYR ARG TRP ASN ALA ALA LYS SEQRES 5 A 763 TRP GLU TRP GLU PRO ILE THR ASP PHE ILE ILE ASN ASN SEQRES 6 A 763 ALA LEU ALA GLY ASN GLY ALA ASN LEU LEU GLY THR GLU SEQRES 7 A 763 SER ILE ALA LEU ASP PRO HIS ASN PRO ASP ARG LEU TYR SEQRES 8 A 763 LEU ALA GLN GLY ASP TYR VAL GLN TRP ASP PRO TRP ALA SEQRES 9 A 763 ALA PHE LEU VAL SER ASP ASP ARG GLY LYS THR PHE LYS SEQRES 10 A 763 GLN TYR ARG SER PRO VAL PRO MET GLY ALA ASN ASP MET SEQRES 11 A 763 GLY ARG ASN GLY GLY GLU ARG LEU ALA VAL ASN PRO HIS SEQRES 12 A 763 TRP THR ASP GLU LEU TRP PHE GLY SER ARG THR GLN GLY SEQRES 13 A 763 LEU TRP ARG SER THR ASP ARG ALA GLN THR TRP SER ARG SEQRES 14 A 763 MET ASN GLN LEU PRO ASP SER SER THR TYR GLY ILE GLY SEQRES 15 A 763 ILE ILE SER VAL ILE PHE ASP PRO LYS ASN VAL GLY THR SEQRES 16 A 763 ALA TYR VAL ALA SER HIS ALA VAL GLY GLY LEU TRP VAL SEQRES 17 A 763 THR TRP ASP GLY GLY ALA ASN TRP SER GLN VAL GLY GLY SEQRES 18 A 763 GLN PRO THR GLN TRP SER ASP TRP THR LYS SER ILE VAL SEQRES 19 A 763 ALA ALA SER GLY THR ALA ILE GLN SER SER GLY PRO LEU SEQRES 20 A 763 PRO ILE LYS ILE ALA LEU GLY LYS ASN GLY ARG LEU TYR SEQRES 21 A 763 ILE THR TYR SER ASP ALA PRO GLY PRO TRP GLY VAL LEU SEQRES 22 A 763 TYR GLY GLU VAL TRP SER TYR ASP PRO THR ASN GLY ASN SEQRES 23 A 763 TRP LYS HIS ILE THR PRO SER ARG GLU GLY ALA ASN THR SEQRES 24 A 763 TYR PRO ALA PRO THR GLY ASN LYS LYS VAL VAL PRO GLY SEQRES 25 A 763 GLY TRP ASN GLY ILE SER VAL GLY ASN GLY ASP THR VAL SEQRES 26 A 763 VAL VAL SER THR LEU ASP ALA ASN GLY GLU ASP SER VAL SEQRES 27 A 763 TYR LEU SER ARG ASP ALA GLY ASN SER TRP LYS ASP LEU SEQRES 28 A 763 GLY LYS LEU THR THR PRO ALA GLY ALA GLY GLY ASN SER SEQRES 29 A 763 GLN LYS GLU SER ASP ALA LYS LEU ARG ASN GLY THR PRO SEQRES 30 A 763 LEU PRO TRP LEU SER PHE GLN ASN ARG GLY SER GLY ILE SEQRES 31 A 763 VAL GLY PHE GLY TRP TRP LEU ALA ALA ILE LEU LEU ASP SEQRES 32 A 763 PRO PHE SER ASP ARG LEU LEU TYR GLY THR GLY ALA VAL SEQRES 33 A 763 ILE TRP ALA THR ASP ALA VAL SER ARG ALA ASP SER ASN SEQRES 34 A 763 GLN ALA PRO SER TRP TYR ILE ASN THR GLU GLY ILE GLU SEQRES 35 A 763 GLU THR ALA ILE LEU VAL LEU LYS SER PRO PRO ALA GLY SEQRES 36 A 763 PRO ALA HIS LEU PHE SER GLY MET TYR ASP LEU GLY GLY SEQRES 37 A 763 MET ARG HIS ASP ASP PHE SER VAL PRO GLN PRO MET TYR SEQRES 38 A 763 SER LYS PRO THR PHE SER SER THR ASP GLY LEU ASP PHE SEQRES 39 A 763 ALA GLY ARG ALA ALA ASN VAL LEU ALA ARG VAL GLY ARG SEQRES 40 A 763 ASN ASP HIS PRO ASP ALA GLY VAL ALA GLY CYS THR GLN SEQRES 41 A 763 GLY ALA TYR THR THR ASN SER GLY ASP SER TRP THR LEU SEQRES 42 A 763 PHE GLN THR CYS VAL PRO SER LEU GLU VAL GLY ASN GLY SEQRES 43 A 763 GLY THR ILE ALA VAL GLY ALA ASP GLY LYS THR PHE VAL SEQRES 44 A 763 TRP SER PRO SER LYS ALA ASP GLY LYS GLY PRO TYR THR SEQRES 45 A 763 SER SER ASP TYR GLY LYS THR TRP THR ALA PRO SER GLY SEQRES 46 A 763 LEU SER LYS GLN THR THR GLY ILE ALA ALA ASP ARG VAL SEQRES 47 A 763 GLN ALA ASN THR PHE TYR VAL TYR VAL GLU GLY ASP PHE SEQRES 48 A 763 PHE VAL SER THR ASP GLY GLY LYS SER TYR THR LYS LYS SEQRES 49 A 763 GLY ASN GLY LEU PRO CYS CYS TRP THR TYR THR GLY THR SEQRES 50 A 763 PRO VAL THR SER ASN LEU ARG ALA GLY GLU LEU TRP VAL SEQRES 51 A 763 SER VAL LYS GLY VAL GLY ILE TYR HIS SER THR ASP PHE SEQRES 52 A 763 GLY ASN THR PHE THR ALA LEU ALA GLY SER GLY SER SER SEQRES 53 A 763 LEU ASN PRO ALA VAL PHE SER ILE GLY ALA PRO GLN THR SEQRES 54 A 763 PRO ASN ALA THR GLU THR LEU PHE LEU TRP GLY ILE PRO SEQRES 55 A 763 SER ALA SER GLN PRO GLU GLY LEU TYR MET SER THR ASP SEQRES 56 A 763 ASN GLY GLY LEU TRP THR ARG LEU ASN ASP ASP ALA HIS SEQRES 57 A 763 ASN TYR GLY GLY ALA THR VAL ILE SER GLY ASP PRO ARG SEQRES 58 A 763 ILE TYR GLY ARG VAL TYR ILE GLY MET ASN GLY ARG GLY SEQRES 59 A 763 ILE ILE CYS ALA GLN ALA LEU GLY THR FORMUL 2 HOH *107(H2 O) HELIX 1 1 SER A 220 GLY A 231 1 12 HELIX 2 2 LEU A 344 THR A 349 1 6 HELIX 3 3 SER A 361 ALA A 363 5 3 HELIX 4 4 LEU A 371 PHE A 376 5 6 HELIX 5 5 ALA A 415 ASN A 422 5 8 SHEET 1 A 4 GLU A 4 PRO A 7 0 SHEET 2 A 4 ILE A 748 GLN A 752 -1 O CYS A 750 N LYS A 6 SHEET 3 A 4 ARG A 738 GLY A 742 -1 N VAL A 739 O ALA A 751 SHEET 4 A 4 VAL A 728 GLY A 731 -1 N SER A 730 O TYR A 740 SHEET 1 B 4 ILE A 16 ALA A 21 0 SHEET 2 B 4 ILE A 29 THR A 33 -1 O TYR A 30 N VAL A 20 SHEET 3 B 4 THR A 38 ASN A 42 -1 O TRP A 41 N ILE A 29 SHEET 4 B 4 GLU A 47 PRO A 50 -1 O GLU A 49 N ARG A 40 SHEET 1 C 4 THR A 70 ALA A 74 0 SHEET 2 C 4 LEU A 83 GLN A 87 -1 O ALA A 86 N SER A 72 SHEET 3 C 4 ALA A 98 SER A 102 -1 O ALA A 98 N GLN A 87 SHEET 4 C 4 LYS A 110 ARG A 113 -1 O TYR A 112 N PHE A 99 SHEET 1 D 4 LEU A 131 VAL A 133 0 SHEET 2 D 4 LEU A 141 GLY A 144 -1 O TRP A 142 N ALA A 132 SHEET 3 D 4 LEU A 150 SER A 153 -1 O SER A 153 N LEU A 141 SHEET 4 D 4 SER A 161 ARG A 162 -1 O SER A 161 N ARG A 152 SHEET 1 E 4 ILE A 176 PHE A 181 0 SHEET 2 E 4 ALA A 189 SER A 193 -1 O ALA A 192 N SER A 178 SHEET 3 E 4 LEU A 199 THR A 202 -1 O TRP A 200 N VAL A 191 SHEET 4 E 4 SER A 210 GLN A 211 -1 O SER A 210 N VAL A 201 SHEET 1 F 4 LEU A 240 LEU A 246 0 SHEET 2 F 4 LEU A 252 SER A 257 -1 O TYR A 253 N ALA A 245 SHEET 3 F 4 GLY A 268 TYR A 273 -1 O GLU A 269 N TYR A 256 SHEET 4 F 4 TRP A 280 HIS A 282 -1 O LYS A 281 N SER A 272 SHEET 1 G 5 THR A 292 TYR A 293 0 SHEET 2 G 5 TRP A 341 ASP A 343 1 O ASP A 343 N TYR A 293 SHEET 3 G 5 VAL A 331 SER A 334 -1 N LEU A 333 O LYS A 342 SHEET 4 G 5 VAL A 318 LEU A 323 -1 N VAL A 320 O TYR A 332 SHEET 5 G 5 GLY A 306 VAL A 312 -1 N SER A 311 O VAL A 319 SHEET 1 H 2 SER A 357 LYS A 359 0 SHEET 2 H 2 ILE A 383 GLY A 385 -1 O VAL A 384 N GLN A 358 SHEET 1 I 4 ILE A 393 LEU A 395 0 SHEET 2 I 4 LEU A 402 GLY A 405 -1 O LEU A 403 N LEU A 394 SHEET 3 I 4 ILE A 410 THR A 413 -1 O TRP A 411 N TYR A 404 SHEET 4 I 4 TRP A 427 ILE A 429 -1 O TYR A 428 N ALA A 412 SHEET 1 J 2 ILE A 439 LYS A 443 0 SHEET 2 J 2 PHE A 453 MET A 456 -1 O GLY A 455 N LEU A 440 SHEET 1 K 4 SER A 481 ALA A 488 0 SHEET 2 K 4 ALA A 491 ARG A 500 -1 O VAL A 498 N GLY A 484 SHEET 3 K 4 GLY A 514 THR A 517 -1 O ALA A 515 N ARG A 497 SHEET 4 K 4 THR A 525 LEU A 526 -1 O THR A 525 N TYR A 516 SHEET 1 L 3 THR A 541 VAL A 544 0 SHEET 2 L 3 PHE A 551 SER A 554 -1 O SER A 554 N THR A 541 SHEET 3 L 3 TYR A 564 SER A 566 -1 O TYR A 564 N TRP A 553 SHEET 1 M 4 ILE A 586 ALA A 588 0 SHEET 2 M 4 PHE A 596 VAL A 600 -1 O TYR A 597 N ALA A 587 SHEET 3 M 4 ASP A 603 SER A 607 -1 O PHE A 605 N VAL A 598 SHEET 4 M 4 THR A 615 LYS A 617 -1 O LYS A 617 N PHE A 604 SHEET 1 N 4 GLY A 629 THR A 633 0 SHEET 2 N 4 LEU A 641 VAL A 645 -1 O TRP A 642 N VAL A 632 SHEET 3 N 4 GLY A 649 SER A 653 -1 O GLY A 649 N VAL A 645 SHEET 4 N 4 THR A 661 ALA A 662 -1 O THR A 661 N HIS A 652 SHEET 1 O 4 ASN A 671 GLY A 678 0 SHEET 2 O 4 THR A 688 ILE A 694 -1 O ILE A 694 N ASN A 671 SHEET 3 O 4 GLY A 702 SER A 706 -1 O TYR A 704 N LEU A 691 SHEET 4 O 4 THR A 714 ARG A 715 -1 O THR A 714 N MET A 705 SSBOND 1 CYS A 511 CYS A 530 1555 1555 2.07 CISPEP 1 GLY A 261 PRO A 262 0 0.90 CISPEP 2 TYR A 293 PRO A 294 0 -9.46 CISPEP 3 LYS A 476 PRO A 477 0 3.67 CRYST1 135.192 135.192 119.895 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007397 0.004271 0.000000 0.00000 SCALE2 0.000000 0.008541 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008341 0.00000