HEADER TRANSFERASE 05-OCT-09 3A7U TITLE CRYSTAL STRUCTURE OF THE BOVINE LIPOYLTRANSFERASE IN ITS UNLIGANDED TITLE 2 FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIPOYLTRANSFERASE 1, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 27-373; COMPND 5 SYNONYM: LIPOATE-PROTEIN LIGASE, LIPOATE BIOSYNTHESIS PROTEIN, LIPOYL COMPND 6 LIGASE; COMPND 7 EC: 2.3.1.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 GENE: LIPT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-3A KEYWDS LIPOIC ACID, ACYLTRANSFERASE, MITOCHONDRION, TRANSFERASE, TRANSIT KEYWDS 2 PEPTIDE EXPDTA X-RAY DIFFRACTION AUTHOR K.FUJIWARA,H.HOSAKA,A.NAKAGAWA REVDAT 4 01-NOV-23 3A7U 1 REMARK REVDAT 3 13-JUL-11 3A7U 1 VERSN REVDAT 2 07-APR-10 3A7U 1 JRNL REVDAT 1 19-JAN-10 3A7U 0 JRNL AUTH K.FUJIWARA,N.MAITA,H.HOSAKA,K.OKAMURA-IKEDA,A.NAKAGAWA, JRNL AUTH 2 H.TANIGUCHI JRNL TITL GLOBAL CONFORMATIONAL CHANGE ASSOCIATED WITH THE TWO-STEP JRNL TITL 2 REACTION CATALYZED BY ESCHERICHIA COLI LIPOATE-PROTEIN JRNL TITL 3 LIGASE A. JRNL REF J.BIOL.CHEM. V. 285 9971 2010 JRNL REFN ISSN 0021-9258 JRNL PMID 20089862 JRNL DOI 10.1074/JBC.M109.078717 REMARK 2 REMARK 2 RESOLUTION. 3.44 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.44 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 7452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : 605 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.44 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 480 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 44 REMARK 3 BIN FREE R VALUE : 0.3530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2600 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 73.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.31000 REMARK 3 B33 (A**2) : -0.47000 REMARK 3 B12 (A**2) : 0.16000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.666 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.544 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 75.132 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.923 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.866 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2659 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3608 ; 0.863 ; 1.942 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 323 ; 5.039 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;34.843 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 472 ;16.643 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;12.799 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 412 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1977 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1617 ; 0.385 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2633 ; 0.704 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1042 ; 0.489 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 975 ; 0.891 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 347 REMARK 3 ORIGIN FOR THE GROUP (A): -12.8283 34.1965 -16.3986 REMARK 3 T TENSOR REMARK 3 T11: 0.1550 T22: 0.0725 REMARK 3 T33: 0.1082 T12: -0.0565 REMARK 3 T13: 0.0934 T23: -0.0578 REMARK 3 L TENSOR REMARK 3 L11: 2.7450 L22: 0.2587 REMARK 3 L33: 2.8956 L12: -0.8017 REMARK 3 L13: -2.2025 L23: 0.7587 REMARK 3 S TENSOR REMARK 3 S11: 0.1580 S12: 0.2146 S13: 0.0813 REMARK 3 S21: -0.0032 S22: -0.0520 S23: -0.0243 REMARK 3 S31: -0.0363 S32: -0.2421 S33: -0.1059 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3A7U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-OCT-09. REMARK 100 THE DEPOSITION ID IS D_1000028920. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER DIP-6040 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8169 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.440 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.50 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 44.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.00 REMARK 200 R MERGE FOR SHELL (I) : 0.45100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2E5A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.40133 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 154.80267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 116.10200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 193.50333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.70067 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 77.40133 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 154.80267 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 193.50333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 116.10200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 38.70067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 VAL A 2 REMARK 465 LYS A 3 REMARK 465 SER A 4 REMARK 465 SER A 169 REMARK 465 PRO A 170 REMARK 465 TYR A 171 REMARK 465 GLN A 172 REMARK 465 GLY A 173 REMARK 465 ILE A 174 REMARK 465 ARG A 175 REMARK 465 SER A 176 REMARK 465 ASN A 177 REMARK 465 ALA A 178 REMARK 465 THR A 179 REMARK 465 ALA A 180 REMARK 465 SER A 181 REMARK 465 THR A 182 REMARK 465 PRO A 183 REMARK 465 ALA A 184 REMARK 465 LEU A 185 REMARK 465 VAL A 186 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 216 N HIS A 218 1.97 REMARK 500 OD2 ASP A 14 ND1 HIS A 17 2.03 REMARK 500 O CYS A 298 ND2 ASN A 302 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 24 -70.49 -23.02 REMARK 500 HIS A 28 -114.41 -125.24 REMARK 500 MET A 29 130.31 -32.84 REMARK 500 LYS A 34 59.05 -150.63 REMARK 500 TRP A 40 123.98 -172.63 REMARK 500 SER A 43 171.70 -51.34 REMARK 500 HIS A 51 44.52 -109.32 REMARK 500 GLU A 65 0.40 -61.03 REMARK 500 LYS A 97 78.24 -111.68 REMARK 500 ALA A 113 1.75 -61.52 REMARK 500 HIS A 117 73.22 41.04 REMARK 500 ARG A 125 30.96 -83.07 REMARK 500 GLN A 133 -93.15 -101.09 REMARK 500 CYS A 152 145.02 -177.74 REMARK 500 SER A 164 -42.36 -27.16 REMARK 500 LEU A 166 65.83 -111.60 REMARK 500 GLU A 191 15.97 -60.66 REMARK 500 ASP A 193 91.04 -162.83 REMARK 500 THR A 195 20.32 -74.90 REMARK 500 GLN A 214 86.50 64.10 REMARK 500 ASP A 216 97.98 -15.49 REMARK 500 ASN A 217 38.52 -44.55 REMARK 500 ASP A 226 94.98 -60.67 REMARK 500 PRO A 231 107.89 -31.70 REMARK 500 LEU A 240 2.51 -53.35 REMARK 500 PRO A 251 155.34 -49.67 REMARK 500 THR A 257 -163.78 -125.84 REMARK 500 HIS A 263 111.59 155.38 REMARK 500 GLU A 264 81.23 -161.26 REMARK 500 GLN A 265 51.13 -98.51 REMARK 500 SER A 266 -152.35 -76.22 REMARK 500 LEU A 293 114.25 -164.05 REMARK 500 PRO A 294 132.29 -35.17 REMARK 500 LEU A 301 -77.75 -66.14 REMARK 500 ASN A 302 -40.67 -28.77 REMARK 500 SER A 304 13.48 -69.84 REMARK 500 PRO A 312 152.61 -39.54 REMARK 500 GLU A 314 109.87 -46.57 REMARK 500 LEU A 318 -79.29 -44.69 REMARK 500 ILE A 321 -55.91 -22.88 REMARK 500 PRO A 327 -120.19 -20.57 REMARK 500 GLU A 341 -83.39 -33.67 REMARK 500 ILE A 346 32.65 -155.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR DETERMINED REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2E5A RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH LIPOYL-AMP DBREF 3A7U A 1 347 UNP O46419 LIPT_BOVIN 27 373 SEQRES 1 A 347 THR VAL LYS SER GLY LEU ILE LEU GLN SER ILE SER ASN SEQRES 2 A 347 ASP VAL TYR HIS ASN LEU ALA VAL GLU ASP TRP ILE HIS SEQRES 3 A 347 ASP HIS MET ASN LEU GLU GLY LYS PRO VAL LEU PHE LEU SEQRES 4 A 347 TRP ARG ASN SER PRO THR VAL VAL ILE GLY ARG HIS GLN SEQRES 5 A 347 ASN PRO TRP GLN GLU CYS ASN LEU ASN LEU MET ARG GLU SEQRES 6 A 347 GLU GLY VAL LYS LEU ALA ARG ARG ARG SER GLY GLY GLY SEQRES 7 A 347 THR VAL TYR HIS ASP MET GLY ASN ILE ASN LEU THR PHE SEQRES 8 A 347 PHE THR THR LYS LYS LYS TYR ASP ARG MET GLU ASN LEU SEQRES 9 A 347 LYS LEU VAL VAL ARG ALA LEU LYS ALA VAL HIS PRO HIS SEQRES 10 A 347 LEU ASP VAL GLN ALA THR LYS ARG PHE ASP LEU LEU LEU SEQRES 11 A 347 ASP GLY GLN PHE LYS ILE SER GLY THR ALA SER LYS ILE SEQRES 12 A 347 GLY ARG ASN ALA ALA TYR HIS HIS CYS THR LEU LEU CYS SEQRES 13 A 347 GLY THR ASP GLY THR PHE LEU SER SER LEU LEU LYS SER SEQRES 14 A 347 PRO TYR GLN GLY ILE ARG SER ASN ALA THR ALA SER THR SEQRES 15 A 347 PRO ALA LEU VAL LYS ASN LEU MET GLU LYS ASP PRO THR SEQRES 16 A 347 LEU THR CYS GLU VAL VAL ILE ASN ALA VAL ALA THR GLU SEQRES 17 A 347 TYR ALA THR SER HIS GLN ILE ASP ASN HIS ILE HIS LEU SEQRES 18 A 347 ILE ASN PRO THR ASP GLU THR VAL PHE PRO GLY ILE ASN SEQRES 19 A 347 SER LYS ALA ILE GLU LEU GLN THR TRP GLU TRP ILE TYR SEQRES 20 A 347 GLY LYS THR PRO LYS PHE SER VAL ASP THR SER PHE THR SEQRES 21 A 347 VAL LEU HIS GLU GLN SER HIS VAL GLU ILE LYS VAL PHE SEQRES 22 A 347 ILE ASP VAL LYS ASN GLY ARG ILE GLU VAL CYS ASN ILE SEQRES 23 A 347 GLU ALA PRO ASP HIS TRP LEU PRO LEU GLU ILE CYS ASP SEQRES 24 A 347 GLN LEU ASN SER SER LEU ILE GLY SER LYS PHE SER PRO SEQRES 25 A 347 ILE GLU THR THR VAL LEU THR SER ILE LEU HIS ARG THR SEQRES 26 A 347 TYR PRO GLY ASP ASP GLU LEU HIS SER LYS TRP ASN ILE SEQRES 27 A 347 LEU CYS GLU LYS ILE LYS GLY ILE MET HELIX 1 1 ASP A 14 HIS A 28 1 15 HELIX 2 2 ASN A 53 CYS A 58 1 6 HELIX 3 3 LEU A 60 GLU A 65 1 6 HELIX 4 4 ASP A 99 ALA A 113 1 15 HELIX 5 5 ASP A 159 SER A 165 1 7 HELIX 6 6 THR A 197 GLN A 214 1 18 HELIX 7 7 ILE A 233 LEU A 240 1 8 HELIX 8 8 THR A 242 TYR A 247 1 6 HELIX 9 9 PRO A 294 ILE A 306 1 13 HELIX 10 10 GLU A 314 ARG A 324 1 11 HELIX 11 11 ASP A 329 GLY A 345 1 17 SHEET 1 A 6 SER A 137 ILE A 143 0 SHEET 2 A 6 ALA A 147 LEU A 155 -1 O TYR A 149 N LYS A 142 SHEET 3 A 6 ASN A 86 THR A 94 -1 N ILE A 87 O LEU A 154 SHEET 4 A 6 VAL A 36 TRP A 40 -1 N VAL A 36 O PHE A 92 SHEET 5 A 6 ILE A 7 SER A 10 1 N LEU A 8 O LEU A 37 SHEET 6 A 6 HIS A 220 ILE A 222 1 O HIS A 220 N ILE A 7 SHEET 1 B 3 LYS A 69 ARG A 72 0 SHEET 2 B 3 THR A 45 ILE A 48 1 N VAL A 46 O LYS A 69 SHEET 3 B 3 VAL A 80 HIS A 82 -1 O HIS A 82 N THR A 45 SHEET 1 C 2 VAL A 120 GLN A 121 0 SHEET 2 C 2 LEU A 129 LEU A 130 -1 O LEU A 129 N GLN A 121 SHEET 1 D 3 PHE A 253 LEU A 262 0 SHEET 2 D 3 HIS A 267 LYS A 277 -1 O VAL A 268 N VAL A 261 SHEET 3 D 3 ARG A 280 GLU A 287 -1 O GLU A 282 N ASP A 275 CISPEP 1 HIS A 263 GLU A 264 0 -3.54 CISPEP 2 GLU A 264 GLN A 265 0 0.16 CRYST1 91.175 91.175 232.204 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010968 0.006332 0.000000 0.00000 SCALE2 0.000000 0.012665 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004307 0.00000