HEADER    LYASE                                   08-NOV-09   3A9X              
TITLE     CRYSTAL STRUCTURE OF RAT SELENOCYSTEINE LYASE                         
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: SELENOCYSTEINE LYASE;                                      
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 EC: 4.4.1.16;                                                        
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;                              
SOURCE   3 ORGANISM_COMMON: BROWN RAT,RAT,RATS;                                 
SOURCE   4 ORGANISM_TAXID: 10116;                                               
SOURCE   5 GENE: SCLY;                                                          
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3);                              
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PET21A(+)                                 
KEYWDS    SELENOCYSTEINE, LYASE, PYRIDOXAL PHOSPHATE, TRANSFERASE               
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.OMI,K.HIROTSU                                                       
REVDAT   2   30-OCT-13 3A9X    1       JRNL   VERSN                             
REVDAT   1   16-MAR-10 3A9X    0                                                
JRNL        AUTH   R.OMI,S.KUROKAWA,H.MIHARA,H.HAYASHI,M.GOTO,I.MIYAHARA,       
JRNL        AUTH 2 T.KURIHARA,K.HIROTSU,N.ESAKI                                 
JRNL        TITL   REACTION MECHANISM AND MOLECULAR BASIS FOR SELENIUM/SULFUR   
JRNL        TITL 2 DISCRIMINATION OF SELENOCYSTEINE LYASE.                      
JRNL        REF    J.BIOL.CHEM.                  V. 285 12133 2010              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   20164179                                                     
JRNL        DOI    10.1074/JBC.M109.084475                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.1                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 20.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : NULL                           
REMARK   3   NUMBER OF REFLECTIONS             : 69695                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                            
REMARK   3   R VALUE            (WORKING SET) : 0.197                           
REMARK   3   FREE R VALUE                     : 0.236                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 6021                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 45                                      
REMARK   3   SOLVENT ATOMS            : 397                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.23                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.17                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 5.00                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : 0.28                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : 0.22                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.022                           
REMARK   3   BOND ANGLES            (DEGREES) : 2.10                            
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 23.40                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 1.43                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : NULL  ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 3A9X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-NOV-09.                  
REMARK 100 THE RCSB ID CODE IS RCSB028995.                                      
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 08-MAR-06                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 4.7                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : PHOTON FACTORY                     
REMARK 200  BEAMLINE                       : BL-5A                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.0                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 69817                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 91.8                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.07                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 85.0                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.29900                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 57.92                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5M AMMONIUM DIHYDROGEN PHOSPHATE, PH   
REMARK 280  4.7, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K                
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       27.22250            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       98.87650            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       51.38550            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       98.87650            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       27.22250            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       51.38550            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 5760 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 29700 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     ASP A     2                                                      
REMARK 465     VAL A     3                                                      
REMARK 465     ALA A     4                                                      
REMARK 465     ARG A     5                                                      
REMARK 465     ASN A     6                                                      
REMARK 465     GLY A     7                                                      
REMARK 465     ALA A     8                                                      
REMARK 465     ARG A     9                                                      
REMARK 465     GLY A    10                                                      
REMARK 465     SER A    11                                                      
REMARK 465     VAL A    12                                                      
REMARK 465     GLU A    13                                                      
REMARK 465     SER A    14                                                      
REMARK 465     PRO A    15                                                      
REMARK 465     PRO A    16                                                      
REMARK 465     ARG A   111                                                      
REMARK 465     THR A   112                                                      
REMARK 465     VAL A   113                                                      
REMARK 465     ASP A   114                                                      
REMARK 465     GLN A   115                                                      
REMARK 465     ILE A   116                                                      
REMARK 465     SER A   117                                                      
REMARK 465     PRO A   118                                                      
REMARK 465     GLU A   119                                                      
REMARK 465     SER A   374                                                      
REMARK 465     CYS A   375                                                      
REMARK 465     HIS A   376                                                      
REMARK 465     SER A   377                                                      
REMARK 465     ASP A   378                                                      
REMARK 465     HIS A   379                                                      
REMARK 465     GLU A   380                                                      
REMARK 465     ASP A   381                                                      
REMARK 465     ARG A   382                                                      
REMARK 465     PRO A   383                                                      
REMARK 465     SER A   384                                                      
REMARK 465     PRO A   385                                                      
REMARK 465     VAL A   386                                                      
REMARK 465     LEU A   387                                                      
REMARK 465     LEU A   388                                                      
REMARK 465     SER A   389                                                      
REMARK 465     CYS A   390                                                      
REMARK 465     GLY A   391                                                      
REMARK 465     ILE A   392                                                      
REMARK 465     MET B     1                                                      
REMARK 465     ASP B     2                                                      
REMARK 465     VAL B     3                                                      
REMARK 465     ALA B     4                                                      
REMARK 465     ARG B     5                                                      
REMARK 465     ASN B     6                                                      
REMARK 465     GLY B     7                                                      
REMARK 465     ALA B     8                                                      
REMARK 465     ARG B     9                                                      
REMARK 465     GLY B    10                                                      
REMARK 465     SER B    11                                                      
REMARK 465     VAL B    12                                                      
REMARK 465     GLU B    13                                                      
REMARK 465     SER B    14                                                      
REMARK 465     PRO B    15                                                      
REMARK 465     PRO B    16                                                      
REMARK 465     ASN B    17                                                      
REMARK 465     GLY B   110                                                      
REMARK 465     ARG B   111                                                      
REMARK 465     THR B   112                                                      
REMARK 465     VAL B   113                                                      
REMARK 465     ASP B   114                                                      
REMARK 465     GLN B   115                                                      
REMARK 465     ILE B   116                                                      
REMARK 465     SER B   117                                                      
REMARK 465     PRO B   118                                                      
REMARK 465     GLU B   119                                                      
REMARK 465     GLU B   120                                                      
REMARK 465     GLY B   121                                                      
REMARK 465     GLY B   430                                                      
REMARK 465     PRO B   431                                                      
REMARK 465     VAL B   432                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A  57    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLN A 109    CG   CD   OE1  NE2                                  
REMARK 470     LYS A 158    CG   CD   CE   NZ                                   
REMARK 470     LYS A 263    CG   CD   CE   NZ                                   
REMARK 470     VAL A 394    CG1  CG2                                            
REMARK 470     ASP A 395    CG   OD1  OD2                                       
REMARK 470     ARG B  18    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS B 158    CG   CD   CE   NZ                                   
REMARK 470     GLU B 380    CG   CD   OE1  OE2                                  
REMARK 470     ASP B 381    CG   OD1  OD2                                       
REMARK 470     ARG B 382    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     VAL B 394    CG1  CG2                                            
REMARK 470     GLN B 427    CG   CD   OE1  NE2                                  
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   NE2  HIS B   103     O    HOH B   616              2.15            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500    GLU B  33   CG    GLU B  33   CD      0.094                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ASP A 235   CB  -  CG  -  OD1 ANGL. DEV. =  -6.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A  51      159.74    -47.65                                   
REMARK 500    LYS A 158       -9.20    -40.43                                   
REMARK 500    VAL A 159      -89.52   -100.44                                   
REMARK 500    ARG A 252       40.24    -73.95                                   
REMARK 500    LYS A 263      -68.51   -132.70                                   
REMARK 500    ARG A 281       78.82   -156.10                                   
REMARK 500    LEU A 355       42.53   -108.99                                   
REMARK 500    ARG B 252       39.09    -73.01                                   
REMARK 500    LYS B 263      -51.52   -127.93                                   
REMARK 500    ARG B 281       84.56   -155.04                                   
REMARK 500    HIS B 379       55.17   -118.78                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500    TYR A 268         0.07    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP B 501                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 502                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 503                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 504                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3A9Y   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 3A9Z   RELATED DB: PDB                                   
DBREF  3A9X A    1   432  UNP    Q68FT9   SCLY_RAT         1    432             
DBREF  3A9X B    1   432  UNP    Q68FT9   SCLY_RAT         1    432             
SEQRES   1 A  432  MET ASP VAL ALA ARG ASN GLY ALA ARG GLY SER VAL GLU          
SEQRES   2 A  432  SER PRO PRO ASN ARG LYS VAL TYR MET ASP TYR ASN ALA          
SEQRES   3 A  432  THR THR PRO LEU GLU PRO GLU VAL ILE GLN ALA VAL THR          
SEQRES   4 A  432  GLU ALA MET LYS GLU ALA TRP GLY ASN PRO SER SER SER          
SEQRES   5 A  432  TYR VAL ALA GLY ARG LYS ALA LYS ASP ILE ILE ASN THR          
SEQRES   6 A  432  ALA ARG ALA SER LEU ALA LYS MET ILE GLY GLY LYS PRO          
SEQRES   7 A  432  GLN ASP ILE ILE PHE THR SER GLY GLY THR GLU SER ASN          
SEQRES   8 A  432  ASN LEU VAL ILE HIS SER THR VAL ARG CYS PHE HIS GLU          
SEQRES   9 A  432  GLN GLN THR LEU GLN GLY ARG THR VAL ASP GLN ILE SER          
SEQRES  10 A  432  PRO GLU GLU GLY THR ARG PRO HIS PHE ILE THR CYS THR          
SEQRES  11 A  432  VAL GLU HIS ASP SER ILE ARG LEU PRO LEU GLU HIS LEU          
SEQRES  12 A  432  VAL GLU ASP GLN VAL ALA GLU VAL THR PHE VAL PRO VAL          
SEQRES  13 A  432  SER LYS VAL ASN GLY GLN VAL GLU VAL GLU ASP ILE LEU          
SEQRES  14 A  432  ALA ALA VAL ARG PRO THR THR CYS LEU VAL THR ILE MET          
SEQRES  15 A  432  LEU ALA ASN ASN GLU THR GLY VAL ILE MET PRO ILE SER          
SEQRES  16 A  432  GLU ILE SER ARG ARG ILE LYS ALA LEU ASN GLN ILE ARG          
SEQRES  17 A  432  ALA ALA SER GLY LEU PRO ARG VAL LEU VAL HIS THR ASP          
SEQRES  18 A  432  ALA ALA GLN ALA LEU GLY LYS ARG ARG VAL ASP VAL GLU          
SEQRES  19 A  432  ASP LEU GLY VAL ASP PHE LEU THR ILE VAL GLY HIS LYS          
SEQRES  20 A  432  PHE TYR GLY PRO ARG ILE GLY ALA LEU TYR VAL ARG GLY          
SEQRES  21 A  432  VAL GLY LYS LEU THR PRO LEU TYR PRO MET LEU PHE GLY          
SEQRES  22 A  432  GLY GLY GLN GLU ARG ASN PHE ARG PRO GLY THR GLU ASN          
SEQRES  23 A  432  THR PRO MET ILE ALA GLY LEU GLY LYS ALA ALA ASP LEU          
SEQRES  24 A  432  VAL SER GLU ASN CYS GLU THR TYR GLU ALA HIS MET ARG          
SEQRES  25 A  432  ASP ILE ARG ASP TYR LEU GLU GLU ARG LEU GLU ALA GLU          
SEQRES  26 A  432  PHE GLY LYS ARG ILE HIS LEU ASN SER ARG PHE PRO GLY          
SEQRES  27 A  432  VAL GLU ARG LEU PRO ASN THR CYS ASN PHE SER ILE GLN          
SEQRES  28 A  432  GLY SER GLN LEU ARG GLY TYR MET VAL LEU ALA GLN CYS          
SEQRES  29 A  432  GLN THR LEU LEU ALA SER VAL GLY ALA SER CYS HIS SER          
SEQRES  30 A  432  ASP HIS GLU ASP ARG PRO SER PRO VAL LEU LEU SER CYS          
SEQRES  31 A  432  GLY ILE PRO VAL ASP VAL ALA ARG ASN ALA VAL ARG LEU          
SEQRES  32 A  432  SER VAL GLY ARG SER THR THR ARG ALA GLU VAL ASP LEU          
SEQRES  33 A  432  ILE VAL GLN ASP LEU LYS GLN ALA VAL ASN GLN LEU GLU          
SEQRES  34 A  432  GLY PRO VAL                                                  
SEQRES   1 B  432  MET ASP VAL ALA ARG ASN GLY ALA ARG GLY SER VAL GLU          
SEQRES   2 B  432  SER PRO PRO ASN ARG LYS VAL TYR MET ASP TYR ASN ALA          
SEQRES   3 B  432  THR THR PRO LEU GLU PRO GLU VAL ILE GLN ALA VAL THR          
SEQRES   4 B  432  GLU ALA MET LYS GLU ALA TRP GLY ASN PRO SER SER SER          
SEQRES   5 B  432  TYR VAL ALA GLY ARG LYS ALA LYS ASP ILE ILE ASN THR          
SEQRES   6 B  432  ALA ARG ALA SER LEU ALA LYS MET ILE GLY GLY LYS PRO          
SEQRES   7 B  432  GLN ASP ILE ILE PHE THR SER GLY GLY THR GLU SER ASN          
SEQRES   8 B  432  ASN LEU VAL ILE HIS SER THR VAL ARG CYS PHE HIS GLU          
SEQRES   9 B  432  GLN GLN THR LEU GLN GLY ARG THR VAL ASP GLN ILE SER          
SEQRES  10 B  432  PRO GLU GLU GLY THR ARG PRO HIS PHE ILE THR CYS THR          
SEQRES  11 B  432  VAL GLU HIS ASP SER ILE ARG LEU PRO LEU GLU HIS LEU          
SEQRES  12 B  432  VAL GLU ASP GLN VAL ALA GLU VAL THR PHE VAL PRO VAL          
SEQRES  13 B  432  SER LYS VAL ASN GLY GLN VAL GLU VAL GLU ASP ILE LEU          
SEQRES  14 B  432  ALA ALA VAL ARG PRO THR THR CYS LEU VAL THR ILE MET          
SEQRES  15 B  432  LEU ALA ASN ASN GLU THR GLY VAL ILE MET PRO ILE SER          
SEQRES  16 B  432  GLU ILE SER ARG ARG ILE LYS ALA LEU ASN GLN ILE ARG          
SEQRES  17 B  432  ALA ALA SER GLY LEU PRO ARG VAL LEU VAL HIS THR ASP          
SEQRES  18 B  432  ALA ALA GLN ALA LEU GLY LYS ARG ARG VAL ASP VAL GLU          
SEQRES  19 B  432  ASP LEU GLY VAL ASP PHE LEU THR ILE VAL GLY HIS LYS          
SEQRES  20 B  432  PHE TYR GLY PRO ARG ILE GLY ALA LEU TYR VAL ARG GLY          
SEQRES  21 B  432  VAL GLY LYS LEU THR PRO LEU TYR PRO MET LEU PHE GLY          
SEQRES  22 B  432  GLY GLY GLN GLU ARG ASN PHE ARG PRO GLY THR GLU ASN          
SEQRES  23 B  432  THR PRO MET ILE ALA GLY LEU GLY LYS ALA ALA ASP LEU          
SEQRES  24 B  432  VAL SER GLU ASN CYS GLU THR TYR GLU ALA HIS MET ARG          
SEQRES  25 B  432  ASP ILE ARG ASP TYR LEU GLU GLU ARG LEU GLU ALA GLU          
SEQRES  26 B  432  PHE GLY LYS ARG ILE HIS LEU ASN SER ARG PHE PRO GLY          
SEQRES  27 B  432  VAL GLU ARG LEU PRO ASN THR CYS ASN PHE SER ILE GLN          
SEQRES  28 B  432  GLY SER GLN LEU ARG GLY TYR MET VAL LEU ALA GLN CYS          
SEQRES  29 B  432  GLN THR LEU LEU ALA SER VAL GLY ALA SER CYS HIS SER          
SEQRES  30 B  432  ASP HIS GLU ASP ARG PRO SER PRO VAL LEU LEU SER CYS          
SEQRES  31 B  432  GLY ILE PRO VAL ASP VAL ALA ARG ASN ALA VAL ARG LEU          
SEQRES  32 B  432  SER VAL GLY ARG SER THR THR ARG ALA GLU VAL ASP LEU          
SEQRES  33 B  432  ILE VAL GLN ASP LEU LYS GLN ALA VAL ASN GLN LEU GLU          
SEQRES  34 B  432  GLY PRO VAL                                                  
HET    PLP  A 501      15                                                       
HET    PLP  B 501      15                                                       
HET    PO4  B 502       5                                                       
HET    PO4  B 503       5                                                       
HET    PO4  B 504       5                                                       
HETNAM     PLP PYRIDOXAL-5'-PHOSPHATE                                           
HETNAM     PO4 PHOSPHATE ION                                                    
HETSYN     PLP VITAMIN B6 PHOSPHATE                                             
FORMUL   3  PLP    2(C8 H10 N O6 P)                                             
FORMUL   5  PO4    3(O4 P 3-)                                                   
FORMUL   8  HOH   *397(H2 O)                                                    
HELIX    1   1 GLU A   31  ALA A   45  1                                  15    
HELIX    2   2 TYR A   53  GLY A   75  1                                  23    
HELIX    3   3 LYS A   77  GLN A   79  5                                   3    
HELIX    4   4 GLY A   86  GLY A  110  1                                  25    
HELIX    5   5 HIS A  133  ASP A  146  1                                  14    
HELIX    6   6 GLU A  164  VAL A  172  1                                   9    
HELIX    7   7 PRO A  193  SER A  211  1                                  19    
HELIX    8   8 ASP A  232  GLY A  237  1                                   6    
HELIX    9   9 HIS A  246  PHE A  248  5                                   3    
HELIX   10  10 GLN A  276  PHE A  280  5                                   5    
HELIX   11  11 ASN A  286  GLY A  327  1                                  42    
HELIX   12  12 ARG A  356  CYS A  364  1                                   9    
HELIX   13  13 PRO A  393  ARG A  398  1                                   6    
HELIX   14  14 THR A  410  GLU A  429  1                                  20    
HELIX   15  15 GLU B   31  ALA B   45  1                                  15    
HELIX   16  16 TYR B   53  GLY B   75  1                                  23    
HELIX   17  17 LYS B   77  GLN B   79  5                                   3    
HELIX   18  18 GLY B   86  LEU B  108  1                                  23    
HELIX   19  19 HIS B  133  ASP B  146  1                                  14    
HELIX   20  20 GLU B  164  ALA B  171  1                                   8    
HELIX   21  21 PRO B  193  GLY B  212  1                                  20    
HELIX   22  22 ASP B  232  GLY B  237  1                                   6    
HELIX   23  23 HIS B  246  PHE B  248  5                                   3    
HELIX   24  24 GLY B  275  PHE B  280  5                                   6    
HELIX   25  25 ASN B  286  GLY B  327  1                                  42    
HELIX   26  26 ARG B  356  CYS B  364  1                                   9    
HELIX   27  27 ALA B  373  GLU B  380  5                                   8    
HELIX   28  28 SER B  384  GLY B  391  1                                   8    
HELIX   29  29 PRO B  393  ASN B  399  1                                   7    
HELIX   30  30 THR B  410  GLU B  429  1                                  20    
SHEET    1   A 2 VAL A  20  TYR A  21  0                                        
SHEET    2   A 2 LEU A 367  LEU A 368  1  O  LEU A 368   N  VAL A  20           
SHEET    1   B 7 ILE A  81  THR A  84  0                                        
SHEET    2   B 7 GLY A 254  VAL A 258 -1  O  GLY A 254   N  THR A  84           
SHEET    3   B 7 PHE A 240  VAL A 244 -1  N  LEU A 241   O  TYR A 257           
SHEET    4   B 7 LEU A 217  ASP A 221  1  N  THR A 220   O  THR A 242           
SHEET    5   B 7 THR A 176  THR A 180  1  N  VAL A 179   O  HIS A 219           
SHEET    6   B 7 HIS A 125  CYS A 129  1  N  HIS A 125   O  CYS A 177           
SHEET    7   B 7 GLU A 150  VAL A 154  1  O  VAL A 154   N  THR A 128           
SHEET    1   C 4 ILE A 330  LEU A 332  0                                        
SHEET    2   C 4 THR A 345  ILE A 350 -1  O  SER A 349   N  HIS A 331           
SHEET    3   C 4 ALA A 400  SER A 404 -1  O  LEU A 403   N  CYS A 346           
SHEET    4   C 4 SER A 370  VAL A 371 -1  N  SER A 370   O  ARG A 402           
SHEET    1   D 2 VAL B  20  TYR B  21  0                                        
SHEET    2   D 2 LEU B 367  LEU B 368  1  O  LEU B 368   N  VAL B  20           
SHEET    1   E 7 ILE B  81  THR B  84  0                                        
SHEET    2   E 7 GLY B 254  VAL B 258 -1  O  LEU B 256   N  ILE B  82           
SHEET    3   E 7 PHE B 240  VAL B 244 -1  N  LEU B 241   O  TYR B 257           
SHEET    4   E 7 LEU B 217  ASP B 221  1  N  THR B 220   O  THR B 242           
SHEET    5   E 7 THR B 176  THR B 180  1  N  VAL B 179   O  HIS B 219           
SHEET    6   E 7 HIS B 125  CYS B 129  1  N  ILE B 127   O  THR B 180           
SHEET    7   E 7 GLU B 150  VAL B 154  1  O  VAL B 154   N  THR B 128           
SHEET    1   F 3 ILE B 330  LEU B 332  0                                        
SHEET    2   F 3 THR B 345  ILE B 350 -1  O  SER B 349   N  HIS B 331           
SHEET    3   F 3 ALA B 400  SER B 404 -1  O  LEU B 403   N  CYS B 346           
LINK         NZ  LYS A 247                 C4A PLP A 501     1555   1555  1.42  
LINK         NZ  LYS B 247                 C4A PLP B 501     1555   1555  1.43  
SITE     1 AC1 15 GLY A  87  THR A  88  ASN A  91  HIS A 133                    
SITE     2 AC1 15 ASN A 186  ASP A 221  ALA A 223  GLN A 224                    
SITE     3 AC1 15 HIS A 246  LYS A 247  HOH A 444  HOH A 445                    
SITE     4 AC1 15 GLY B 283  THR B 284  HOH B 514                               
SITE     1 AC2 15 GLY A 283  THR A 284  GLY B  87  THR B  88                    
SITE     2 AC2 15 HIS B 133  ASP B 221  ALA B 223  GLN B 224                    
SITE     3 AC2 15 HIS B 246  LYS B 247  HOH B 439  PO4 B 502                    
SITE     4 AC2 15 PO4 B 503  HOH B 535  HOH B 617                               
SITE     1 AC3 10 ASN A  48  THR A 284  ALA B  26  HIS B 133                    
SITE     2 AC3 10 LYS B 247  SER B 374  CYS B 375  PLP B 501                    
SITE     3 AC3 10 PO4 B 503  HOH B 617                                          
SITE     1 AC4 10 ASN B  25  ALA B  26  ASN B 186  GLN B 224                    
SITE     2 AC4 10 LYS B 247  ALA B 373  SER B 374  ARG B 402                    
SITE     3 AC4 10 PLP B 501  PO4 B 502                                          
SITE     1 AC5  7 ARG B 315  ASP B 316  ARG B 341  GLY B 352                    
SITE     2 AC5  7 SER B 353  GLU B 429  HOH B 497                               
CRYST1   54.445  102.771  197.753  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.018367  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.009730  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.005057        0.00000