HEADER CELL CYCLE/REPLICATION 07-DEC-09 3ABD
TITLE STRUCTURE OF HUMAN REV7 IN COMPLEX WITH A HUMAN REV3 FRAGMENT IN A
TITLE 2 MONOCLINIC CRYSTAL
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2B;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: REV7, MAD2-LIKE 2, HREV7;
COMPND 5 ENGINEERED: YES;
COMPND 6 MUTATION: YES;
COMPND 7 MOL_ID: 2;
COMPND 8 MOLECULE: DNA POLYMERASE ZETA CATALYTIC SUBUNIT;
COMPND 9 CHAIN: X, Y;
COMPND 10 FRAGMENT: RESIDUES 1847-1898;
COMPND 11 SYNONYM: REV3, HREV3;
COMPND 12 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: REV7;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETDUET;
SOURCE 11 MOL_ID: 2;
SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 13 ORGANISM_COMMON: HUMAN;
SOURCE 14 ORGANISM_TAXID: 9606;
SOURCE 15 GENE: REV3;
SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);
SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PETDUET
KEYWDS DNA POLYMERASE, HORMA, DNA REPLICATION, TRANSLESION DNA SYNTHESIS,
KEYWDS 2 CELL CYCLE, CELL DIVISION, MITOSIS, DNA DAMAGE, DNA REPAIR, DNA-
KEYWDS 3 BINDING, DNA-DIRECTED DNA POLYMERASE, CELL CYCLE-REPLICATION COMPLEX
EXPDTA X-RAY DIFFRACTION
AUTHOR K.HARA,H.HASHIMOTO,Y.MURAKUMO,S.KOBAYASHI,T.KOGAME,S.UNZAI,S.AKASHI,
AUTHOR 2 S.TAKEDA,T.SHIMIZU,M.SATO
REVDAT 6 29-MAY-24 3ABD 1 REMARK
REVDAT 5 10-NOV-21 3ABD 1 REMARK SEQADV
REVDAT 4 11-OCT-17 3ABD 1 REMARK
REVDAT 3 13-JUL-11 3ABD 1 VERSN
REVDAT 2 21-APR-10 3ABD 1 JRNL
REVDAT 1 16-FEB-10 3ABD 0
JRNL AUTH K.HARA,H.HASHIMOTO,Y.MURAKUMO,S.KOBAYASHI,T.KOGAME,S.UNZAI,
JRNL AUTH 2 S.AKASHI,S.TAKEDA,T.SHIMIZU,M.SATO
JRNL TITL CRYSTAL STRUCTURE OF HUMAN REV7 IN COMPLEX WITH A HUMAN REV3
JRNL TITL 2 FRAGMENT AND STRUCTURAL IMPLICATION OF THE INTERACTION
JRNL TITL 3 BETWEEN DNA POLYMERASE {ZETA} AND REV1
JRNL REF J.BIOL.CHEM. V. 285 12299 2010
JRNL REFN ISSN 0021-9258
JRNL PMID 20164194
JRNL DOI 10.1074/JBC.M109.092403
REMARK 2
REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.5.0066
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.96
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0
REMARK 3 NUMBER OF REFLECTIONS : 33833
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.189
REMARK 3 R VALUE (WORKING SET) : 0.187
REMARK 3 FREE R VALUE : 0.241
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 1780
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95
REMARK 3 REFLECTION IN BIN (WORKING SET) : 2050
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0
REMARK 3 BIN R VALUE (WORKING SET) : 0.2170
REMARK 3 BIN FREE R VALUE SET COUNT : 88
REMARK 3 BIN FREE R VALUE : 0.2600
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3360
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 0
REMARK 3 SOLVENT ATOMS : 257
REMARK 3
REMARK 3 B VALUES.
REMARK 3 B VALUE TYPE : LIKELY RESIDUAL
REMARK 3 FROM WILSON PLOT (A**2) : 25.40
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.77
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -0.13000
REMARK 3 B22 (A**2) : -0.03000
REMARK 3 B33 (A**2) : 0.17000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.153
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.099
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.618
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3361 ; 0.020 ; 0.022
REMARK 3 BOND LENGTHS OTHERS (A): 3165 ; 0.000 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4577 ; 1.689 ; 1.979
REMARK 3 BOND ANGLES OTHERS (DEGREES): 7361 ; 1.115 ; 3.000
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 411 ; 5.976 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 136 ;29.522 ;24.779
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 583 ;15.204 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;27.738 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 551 ; 0.098 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3608 ; 0.008 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): 594 ; 0.008 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2104 ; 0.927 ; 1.500
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 822 ; 0.250 ; 1.500
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3453 ; 1.716 ; 2.000
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1257 ; 2.742 ; 3.000
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1124 ; 4.445 ; 4.500
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 12 A 211
REMARK 3 ORIGIN FOR THE GROUP (A): 12.3730 0.1100 10.4440
REMARK 3 T TENSOR
REMARK 3 T11: 0.0542 T22: 0.0701
REMARK 3 T33: 0.0105 T12: -0.0001
REMARK 3 T13: -0.0045 T23: -0.0214
REMARK 3 L TENSOR
REMARK 3 L11: 1.2894 L22: 2.0152
REMARK 3 L33: 1.6599 L12: -0.0947
REMARK 3 L13: 0.5621 L23: 0.3264
REMARK 3 S TENSOR
REMARK 3 S11: -0.0021 S12: -0.1184 S13: 0.0032
REMARK 3 S21: 0.1358 S22: 0.0176 S23: 0.0158
REMARK 3 S31: 0.0018 S32: -0.1246 S33: -0.0155
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 10 B 211
REMARK 3 ORIGIN FOR THE GROUP (A): 27.0050 22.7090 41.3890
REMARK 3 T TENSOR
REMARK 3 T11: 0.0861 T22: 0.0581
REMARK 3 T33: 0.0152 T12: 0.0184
REMARK 3 T13: 0.0080 T23: -0.0244
REMARK 3 L TENSOR
REMARK 3 L11: 0.9878 L22: 2.1264
REMARK 3 L33: 1.7329 L12: -0.0363
REMARK 3 L13: -0.0117 L23: 0.5576
REMARK 3 S TENSOR
REMARK 3 S11: 0.0755 S12: 0.0512 S13: -0.0225
REMARK 3 S21: -0.2108 S22: -0.0372 S23: -0.0120
REMARK 3 S31: -0.0057 S32: -0.0142 S33: -0.0383
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : BABINET MODEL WITH MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.40
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS
REMARK 4
REMARK 4 3ABD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-DEC-09.
REMARK 100 THE DEPOSITION ID IS D_1000029044.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 07-OCT-07
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : PHOTON FACTORY
REMARK 200 BEAMLINE : BL-5A
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35667
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3
REMARK 200 DATA REDUNDANCY : 3.600
REMARK 200 R MERGE (I) : 0.05500
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.1000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97
REMARK 200 COMPLETENESS FOR SHELL (%) : 83.1
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.26800
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR
REMARK 200 SOFTWARE USED: SOLVE
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 33.18
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 2000 MME, 0.8M SODIUM FORMATE,
REMARK 280 0.1M TRIS-HCL PH 7.5,, VAPOR DIFFUSION, HANGING DROP,
REMARK 280 TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.00450
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 10210 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, X
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 2160 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 11100 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Y
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A -15
REMARK 465 GLY A -14
REMARK 465 SER A -13
REMARK 465 SER A -12
REMARK 465 HIS A -11
REMARK 465 HIS A -10
REMARK 465 HIS A -9
REMARK 465 HIS A -8
REMARK 465 HIS A -7
REMARK 465 HIS A -6
REMARK 465 SER A -5
REMARK 465 GLN A -4
REMARK 465 ASP A -3
REMARK 465 PRO A -2
REMARK 465 ASN A -1
REMARK 465 SER A 0
REMARK 465 MET A 1
REMARK 465 THR A 2
REMARK 465 THR A 3
REMARK 465 LEU A 4
REMARK 465 THR A 5
REMARK 465 ARG A 6
REMARK 465 GLN A 7
REMARK 465 ASP A 8
REMARK 465 LEU A 9
REMARK 465 ASN A 10
REMARK 465 PHE A 11
REMARK 465 LEU A 107
REMARK 465 LEU A 108
REMARK 465 SER A 109
REMARK 465 ILE A 110
REMARK 465 SER A 111
REMARK 465 SER A 112
REMARK 465 GLU A 154
REMARK 465 ALA A 155
REMARK 465 ALA A 156
REMARK 465 THR A 157
REMARK 465 ARG A 158
REMARK 465 ASN A 159
REMARK 465 MET A 160
REMARK 465 GLU A 161
REMARK 465 LYS A 162
REMARK 465 ILE A 163
REMARK 465 GLN A 164
REMARK 465 VAL A 165
REMARK 465 ILE A 166
REMARK 465 LYS A 167
REMARK 465 MET X 1847
REMARK 465 LEU X 1848
REMARK 465 THR X 1849
REMARK 465 PRO X 1850
REMARK 465 THR X 1851
REMARK 465 PRO X 1852
REMARK 465 ASP X 1853
REMARK 465 SER X 1854
REMARK 465 SER X 1855
REMARK 465 PRO X 1856
REMARK 465 ARG X 1857
REMARK 465 SER X 1858
REMARK 465 THR X 1859
REMARK 465 SER X 1860
REMARK 465 SER X 1861
REMARK 465 PRO X 1862
REMARK 465 SER X 1863
REMARK 465 GLN X 1864
REMARK 465 SER X 1865
REMARK 465 LYS X 1866
REMARK 465 ASN X 1867
REMARK 465 GLY X 1868
REMARK 465 SER X 1869
REMARK 465 PHE X 1870
REMARK 465 THR X 1871
REMARK 465 PRO X 1872
REMARK 465 ARG X 1873
REMARK 465 LEU X 1895
REMARK 465 ASP X 1896
REMARK 465 HIS X 1897
REMARK 465 ASP X 1898
REMARK 465 MET B -15
REMARK 465 GLY B -14
REMARK 465 SER B -13
REMARK 465 SER B -12
REMARK 465 HIS B -11
REMARK 465 HIS B -10
REMARK 465 HIS B -9
REMARK 465 HIS B -8
REMARK 465 HIS B -7
REMARK 465 HIS B -6
REMARK 465 SER B -5
REMARK 465 GLN B -4
REMARK 465 ASP B -3
REMARK 465 PRO B -2
REMARK 465 ASN B -1
REMARK 465 SER B 0
REMARK 465 MET B 1
REMARK 465 THR B 2
REMARK 465 THR B 3
REMARK 465 LEU B 4
REMARK 465 THR B 5
REMARK 465 ARG B 6
REMARK 465 GLN B 7
REMARK 465 ASP B 8
REMARK 465 LEU B 9
REMARK 465 GLU B 154
REMARK 465 ALA B 155
REMARK 465 ALA B 156
REMARK 465 THR B 157
REMARK 465 ARG B 158
REMARK 465 ASN B 159
REMARK 465 MET B 160
REMARK 465 MET Y 1847
REMARK 465 LEU Y 1848
REMARK 465 THR Y 1849
REMARK 465 PRO Y 1850
REMARK 465 THR Y 1851
REMARK 465 PRO Y 1852
REMARK 465 ASP Y 1853
REMARK 465 SER Y 1854
REMARK 465 SER Y 1855
REMARK 465 PRO Y 1856
REMARK 465 ARG Y 1857
REMARK 465 SER Y 1858
REMARK 465 THR Y 1859
REMARK 465 SER Y 1860
REMARK 465 SER Y 1861
REMARK 465 PRO Y 1862
REMARK 465 SER Y 1863
REMARK 465 GLN Y 1864
REMARK 465 SER Y 1865
REMARK 465 LYS Y 1866
REMARK 465 ASN Y 1867
REMARK 465 GLY Y 1868
REMARK 465 SER Y 1869
REMARK 465 PHE Y 1870
REMARK 465 THR Y 1871
REMARK 465 PRO Y 1872
REMARK 465 ARG Y 1873
REMARK 465 ASP Y 1896
REMARK 465 HIS Y 1897
REMARK 465 ASP Y 1898
REMARK 480
REMARK 480 ZERO OCCUPANCY ATOM
REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO
REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS
REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME;
REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 480 M RES C SSEQI ATOMS
REMARK 480 GLN A 13 CG CD OE1 NE2
REMARK 480 LYS A 44 CD CE NZ
REMARK 480 ARG A 45 NE CZ NH1 NH2
REMARK 480 GLU A 76 CD OE1 OE2
REMARK 480 LYS A 77 CD CE NZ
REMARK 480 LYS A 90 CD CE NZ
REMARK 480 ASP A 113 CG OD1 OD2
REMARK 480 LEU A 115 CG CD1 CD2
REMARK 480 LYS B 44 CE NZ
REMARK 480 ARG B 45 CZ NH1 NH2
REMARK 480 LYS B 46 CD CE NZ
REMARK 480 LYS B 90 CD CE NZ
REMARK 480 LEU B 108 CG CD1 CD2
REMARK 480 GLU B 161 CG CD OE1 OE2
REMARK 480 LYS B 162 CD CE NZ
REMARK 480 GLN B 164 CG CD OE1 NE2
REMARK 480 LYS B 167 CB CG CD CE NZ
REMARK 480 ASP B 168 CB CG OD1 OD2
REMARK 480 GLN B 177 CG CD OE1 NE2
REMARK 480 THR Y 1874 CB OG1 CG2
REMARK 480 GLU Y 1889 CG CD OE1 OE2
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3ABE RELATED DB: PDB
REMARK 900 THE SAME PROTEIN IN A TETRAGONAL CRYSTAL
DBREF 3ABD A 1 211 UNP Q9UI95 MD2L2_HUMAN 1 211
DBREF 3ABD X 1847 1898 UNP O60673 DPOLZ_HUMAN 1847 1898
DBREF 3ABD B 1 211 UNP Q9UI95 MD2L2_HUMAN 1 211
DBREF 3ABD Y 1847 1898 UNP O60673 DPOLZ_HUMAN 1847 1898
SEQADV 3ABD MET A -15 UNP Q9UI95 INITIATING METHIONINE
SEQADV 3ABD GLY A -14 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER A -13 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER A -12 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS A -11 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS A -10 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS A -9 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS A -8 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS A -7 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS A -6 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER A -5 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD GLN A -4 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD ASP A -3 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD PRO A -2 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD ASN A -1 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER A 0 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD ALA A 124 UNP Q9UI95 ARG 124 ENGINEERED MUTATION
SEQADV 3ABD MET B -15 UNP Q9UI95 INITIATING METHIONINE
SEQADV 3ABD GLY B -14 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER B -13 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER B -12 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS B -11 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS B -10 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS B -9 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS B -8 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS B -7 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD HIS B -6 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER B -5 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD GLN B -4 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD ASP B -3 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD PRO B -2 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD ASN B -1 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD SER B 0 UNP Q9UI95 EXPRESSION TAG
SEQADV 3ABD ALA B 124 UNP Q9UI95 ARG 124 ENGINEERED MUTATION
SEQRES 1 A 227 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP
SEQRES 2 A 227 PRO ASN SER MET THR THR LEU THR ARG GLN ASP LEU ASN
SEQRES 3 A 227 PHE GLY GLN VAL VAL ALA ASP VAL LEU CYS GLU PHE LEU
SEQRES 4 A 227 GLU VAL ALA VAL HIS LEU ILE LEU TYR VAL ARG GLU VAL
SEQRES 5 A 227 TYR PRO VAL GLY ILE PHE GLN LYS ARG LYS LYS TYR ASN
SEQRES 6 A 227 VAL PRO VAL GLN MET SER CYS HIS PRO GLU LEU ASN GLN
SEQRES 7 A 227 TYR ILE GLN ASP THR LEU HIS CYS VAL LYS PRO LEU LEU
SEQRES 8 A 227 GLU LYS ASN ASP VAL GLU LYS VAL VAL VAL VAL ILE LEU
SEQRES 9 A 227 ASP LYS GLU HIS ARG PRO VAL GLU LYS PHE VAL PHE GLU
SEQRES 10 A 227 ILE THR GLN PRO PRO LEU LEU SER ILE SER SER ASP SER
SEQRES 11 A 227 LEU LEU SER HIS VAL GLU GLN LEU LEU ALA ALA PHE ILE
SEQRES 12 A 227 LEU LYS ILE SER VAL CYS ASP ALA VAL LEU ASP HIS ASN
SEQRES 13 A 227 PRO PRO GLY CYS THR PHE THR VAL LEU VAL HIS THR ARG
SEQRES 14 A 227 GLU ALA ALA THR ARG ASN MET GLU LYS ILE GLN VAL ILE
SEQRES 15 A 227 LYS ASP PHE PRO TRP ILE LEU ALA ASP GLU GLN ASP VAL
SEQRES 16 A 227 HIS MET HIS ASP PRO ARG LEU ILE PRO LEU LYS THR MET
SEQRES 17 A 227 THR SER ASP ILE LEU LYS MET GLN LEU TYR VAL GLU GLU
SEQRES 18 A 227 ARG ALA HIS LYS GLY SER
SEQRES 1 X 52 MET LEU THR PRO THR PRO ASP SER SER PRO ARG SER THR
SEQRES 2 X 52 SER SER PRO SER GLN SER LYS ASN GLY SER PHE THR PRO
SEQRES 3 X 52 ARG THR ALA ASN ILE LEU LYS PRO LEU MET SER PRO PRO
SEQRES 4 X 52 SER ARG GLU GLU ILE MET ALA THR LEU LEU ASP HIS ASP
SEQRES 1 B 227 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP
SEQRES 2 B 227 PRO ASN SER MET THR THR LEU THR ARG GLN ASP LEU ASN
SEQRES 3 B 227 PHE GLY GLN VAL VAL ALA ASP VAL LEU CYS GLU PHE LEU
SEQRES 4 B 227 GLU VAL ALA VAL HIS LEU ILE LEU TYR VAL ARG GLU VAL
SEQRES 5 B 227 TYR PRO VAL GLY ILE PHE GLN LYS ARG LYS LYS TYR ASN
SEQRES 6 B 227 VAL PRO VAL GLN MET SER CYS HIS PRO GLU LEU ASN GLN
SEQRES 7 B 227 TYR ILE GLN ASP THR LEU HIS CYS VAL LYS PRO LEU LEU
SEQRES 8 B 227 GLU LYS ASN ASP VAL GLU LYS VAL VAL VAL VAL ILE LEU
SEQRES 9 B 227 ASP LYS GLU HIS ARG PRO VAL GLU LYS PHE VAL PHE GLU
SEQRES 10 B 227 ILE THR GLN PRO PRO LEU LEU SER ILE SER SER ASP SER
SEQRES 11 B 227 LEU LEU SER HIS VAL GLU GLN LEU LEU ALA ALA PHE ILE
SEQRES 12 B 227 LEU LYS ILE SER VAL CYS ASP ALA VAL LEU ASP HIS ASN
SEQRES 13 B 227 PRO PRO GLY CYS THR PHE THR VAL LEU VAL HIS THR ARG
SEQRES 14 B 227 GLU ALA ALA THR ARG ASN MET GLU LYS ILE GLN VAL ILE
SEQRES 15 B 227 LYS ASP PHE PRO TRP ILE LEU ALA ASP GLU GLN ASP VAL
SEQRES 16 B 227 HIS MET HIS ASP PRO ARG LEU ILE PRO LEU LYS THR MET
SEQRES 17 B 227 THR SER ASP ILE LEU LYS MET GLN LEU TYR VAL GLU GLU
SEQRES 18 B 227 ARG ALA HIS LYS GLY SER
SEQRES 1 Y 52 MET LEU THR PRO THR PRO ASP SER SER PRO ARG SER THR
SEQRES 2 Y 52 SER SER PRO SER GLN SER LYS ASN GLY SER PHE THR PRO
SEQRES 3 Y 52 ARG THR ALA ASN ILE LEU LYS PRO LEU MET SER PRO PRO
SEQRES 4 Y 52 SER ARG GLU GLU ILE MET ALA THR LEU LEU ASP HIS ASP
FORMUL 5 HOH *257(H2 O)
HELIX 1 1 GLY A 12 ARG A 34 1 23
HELIX 2 2 PRO A 38 GLY A 40 5 3
HELIX 3 3 HIS A 57 LYS A 77 1 21
HELIX 4 4 SER A 114 VAL A 132 1 19
HELIX 5 5 CYS A 133 VAL A 136 5 4
HELIX 6 6 ASP A 175 HIS A 180 1 6
HELIX 7 7 SER X 1886 LEU X 1894 1 9
HELIX 8 8 PHE B 11 ARG B 34 1 24
HELIX 9 9 PRO B 38 GLY B 40 5 3
HELIX 10 10 HIS B 57 LYS B 77 1 21
HELIX 11 11 SER B 114 VAL B 132 1 19
HELIX 12 12 CYS B 133 VAL B 136 5 4
HELIX 13 13 ASP B 175 HIS B 180 1 6
HELIX 14 14 SER Y 1886 LEU Y 1894 1 9
SHEET 1 A 2 PHE A 42 LYS A 47 0
SHEET 2 A 2 VAL A 50 SER A 55 -1 O VAL A 50 N LYS A 47
SHEET 1 B 7 TRP A 171 LEU A 173 0
SHEET 2 B 7 ILE X1877 PRO X1880 -1 O LYS X1879 N ILE A 172
SHEET 3 B 7 THR A 145 THR A 152 -1 N VAL A 150 O LEU X1878
SHEET 4 B 7 VAL A 80 LEU A 88 -1 N VAL A 84 O LEU A 149
SHEET 5 B 7 PRO A 94 THR A 103 -1 O VAL A 95 N ILE A 87
SHEET 6 B 7 LYS A 198 ARG A 206 -1 O LYS A 198 N THR A 103
SHEET 7 B 7 PRO A 184 THR A 193 -1 N LYS A 190 O LEU A 201
SHEET 1 C 2 PHE B 42 LYS B 47 0
SHEET 2 C 2 VAL B 50 SER B 55 -1 O VAL B 52 N ARG B 45
SHEET 1 D 7 TRP B 171 LEU B 173 0
SHEET 2 D 7 ILE Y1877 PRO Y1880 -1 O LYS Y1879 N ILE B 172
SHEET 3 D 7 THR B 145 THR B 152 -1 N VAL B 150 O LEU Y1878
SHEET 4 D 7 VAL B 80 LEU B 88 -1 N VAL B 84 O LEU B 149
SHEET 5 D 7 PRO B 94 THR B 103 -1 O VAL B 95 N ILE B 87
SHEET 6 D 7 LYS B 198 ARG B 206 -1 O TYR B 202 N VAL B 99
SHEET 7 D 7 PRO B 184 MET B 192 -1 N LYS B 190 O LEU B 201
CRYST1 43.870 50.009 107.275 90.00 96.90 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.022795 0.000000 0.002759 0.00000
SCALE2 0.000000 0.019996 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009390 0.00000