HEADER LYASE 10-FEB-10 3AEJ TITLE REACTION INTERMEDIATE STRUCTURE OF ENTAMOEBA HISTOLYTICA METHIONINE TITLE 2 GAMMA-LYASE 1 TETRAMER CONTAINING MICHAELIS COMPLEX AND METHIONINE- TITLE 3 PYRIDOXAL-5'-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METHIONINE GAMMA-LYASE; COMPND 3 CHAIN: A, B, D; COMPND 4 EC: 4.4.1.11; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: METHIONINE GAMMA-LYASE; COMPND 8 CHAIN: C; COMPND 9 EC: 4.4.1.11; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 GENE: METG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PGEX6P1; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 12 ORGANISM_TAXID: 5759; SOURCE 13 GENE: METG; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 18 EXPRESSION_SYSTEM_VECTOR: PGEX6P1 KEYWDS GAMMA-LYASE, L-METHIONINE, ENTAMOEBA HISTOLYTICA, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR T.KARAKI,D.SATO,A.SHIMIZU,T.NOZAKI,S.HARADA REVDAT 4 15-NOV-23 3AEJ 1 REMARK REVDAT 3 01-NOV-23 3AEJ 1 REMARK LINK REVDAT 2 11-OCT-17 3AEJ 1 REMARK REVDAT 1 09-FEB-11 3AEJ 0 JRNL AUTH T.KARAKI,D.SATO,A.SHIMIZU,T.NOZAKI,S.HARADA JRNL TITL CRYSTAL STRUCTURE OF ENTAMOEBA HISTOLYTICA METHIONINE JRNL TITL 2 GAMMA-LYASE 1 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.59 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.59 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 57685 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2924 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.59 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3751 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2730 REMARK 3 BIN FREE R VALUE SET COUNT : 197 REMARK 3 BIN FREE R VALUE : 0.3380 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11767 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 113 REMARK 3 SOLVENT ATOMS : 419 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : -0.27000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.823 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.320 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.229 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.616 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.918 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.877 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12134 ; 0.006 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16414 ; 0.938 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1546 ; 4.462 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 465 ;33.128 ;24.624 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2102 ;14.394 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ; 9.381 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1867 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8924 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7686 ; 0.088 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 12373 ; 0.167 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4448 ; 0.243 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4038 ; 0.432 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 55 REMARK 3 ORIGIN FOR THE GROUP (A): 1.0070 -15.0310 34.0820 REMARK 3 T TENSOR REMARK 3 T11: 0.2965 T22: 0.4528 REMARK 3 T33: 0.3347 T12: -0.1727 REMARK 3 T13: 0.0645 T23: -0.0518 REMARK 3 L TENSOR REMARK 3 L11: 0.9176 L22: 1.0915 REMARK 3 L33: 2.4737 L12: -0.2365 REMARK 3 L13: 0.9509 L23: 0.7915 REMARK 3 S TENSOR REMARK 3 S11: 0.2428 S12: -0.0940 S13: -0.3532 REMARK 3 S21: 0.0559 S22: -0.1592 S23: 0.1633 REMARK 3 S31: 0.6278 S32: -0.6379 S33: -0.0836 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 56 A 306 REMARK 3 ORIGIN FOR THE GROUP (A): -9.1860 5.0880 48.9700 REMARK 3 T TENSOR REMARK 3 T11: 0.1242 T22: 0.1758 REMARK 3 T33: 0.2240 T12: 0.0084 REMARK 3 T13: 0.0175 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.3771 L22: 0.7227 REMARK 3 L33: 0.2329 L12: 0.2293 REMARK 3 L13: 0.2194 L23: 0.2088 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: 0.0308 S13: 0.0895 REMARK 3 S21: 0.0667 S22: -0.0138 S23: 0.1016 REMARK 3 S31: -0.0119 S32: -0.0737 S33: 0.0335 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 307 A 389 REMARK 3 ORIGIN FOR THE GROUP (A): 2.9510 22.9720 53.1800 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1943 REMARK 3 T33: 0.2351 T12: 0.0120 REMARK 3 T13: -0.0224 T23: 0.0145 REMARK 3 L TENSOR REMARK 3 L11: 1.5140 L22: 4.1944 REMARK 3 L33: 1.2906 L12: -0.5047 REMARK 3 L13: -0.8462 L23: 0.8968 REMARK 3 S TENSOR REMARK 3 S11: 0.0811 S12: 0.1670 S13: 0.2902 REMARK 3 S21: -0.2573 S22: -0.0588 S23: 0.2296 REMARK 3 S31: -0.1269 S32: -0.1245 S33: -0.0223 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 53 B 551 REMARK 3 ORIGIN FOR THE GROUP (A): 16.1680 -19.0390 27.6830 REMARK 3 T TENSOR REMARK 3 T11: 0.2879 T22: 0.3625 REMARK 3 T33: 0.3318 T12: -0.0265 REMARK 3 T13: 0.0341 T23: -0.1549 REMARK 3 L TENSOR REMARK 3 L11: 0.8926 L22: 1.5847 REMARK 3 L33: 5.6825 L12: -0.8923 REMARK 3 L13: 1.3487 L23: -2.8852 REMARK 3 S TENSOR REMARK 3 S11: 0.0443 S12: 0.2944 S13: -0.2895 REMARK 3 S21: -0.3811 S22: -0.1101 S23: 0.0086 REMARK 3 S31: 0.9188 S32: 0.1727 S33: 0.0658 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 552 B 752 REMARK 3 ORIGIN FOR THE GROUP (A): 36.5540 -8.1660 18.0800 REMARK 3 T TENSOR REMARK 3 T11: 0.2132 T22: 0.3447 REMARK 3 T33: 0.1884 T12: 0.0150 REMARK 3 T13: 0.0460 T23: -0.0582 REMARK 3 L TENSOR REMARK 3 L11: 2.2290 L22: 0.5165 REMARK 3 L33: 1.2606 L12: 0.0792 REMARK 3 L13: 0.1856 L23: -0.0378 REMARK 3 S TENSOR REMARK 3 S11: 0.0092 S12: 0.3965 S13: -0.0837 REMARK 3 S21: -0.1875 S22: 0.0037 S23: -0.1320 REMARK 3 S31: 0.1069 S32: 0.1413 S33: -0.0130 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 753 B 888 REMARK 3 ORIGIN FOR THE GROUP (A): 31.0460 11.6290 5.6400 REMARK 3 T TENSOR REMARK 3 T11: 0.2467 T22: 0.5326 REMARK 3 T33: 0.0940 T12: 0.0034 REMARK 3 T13: 0.0548 T23: 0.1268 REMARK 3 L TENSOR REMARK 3 L11: 2.6111 L22: 2.7596 REMARK 3 L33: 2.3583 L12: 0.8929 REMARK 3 L13: -0.4773 L23: 0.2345 REMARK 3 S TENSOR REMARK 3 S11: 0.0847 S12: 0.4600 S13: 0.2653 REMARK 3 S21: -0.3202 S22: -0.0171 S23: -0.1999 REMARK 3 S31: -0.1945 S32: 0.2256 S33: -0.0677 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1003 C 1055 REMARK 3 ORIGIN FOR THE GROUP (A): 24.8140 15.0750 34.0140 REMARK 3 T TENSOR REMARK 3 T11: 0.2364 T22: 0.4517 REMARK 3 T33: 0.3276 T12: -0.1333 REMARK 3 T13: -0.0449 T23: 0.0666 REMARK 3 L TENSOR REMARK 3 L11: 1.5510 L22: 0.7031 REMARK 3 L33: 3.1906 L12: -0.2707 REMARK 3 L13: -2.0037 L23: -0.1248 REMARK 3 S TENSOR REMARK 3 S11: 0.2900 S12: -0.1588 S13: 0.2907 REMARK 3 S21: 0.0435 S22: -0.1554 S23: -0.1839 REMARK 3 S31: -0.5694 S32: 0.6177 S33: -0.1347 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1056 C 1266 REMARK 3 ORIGIN FOR THE GROUP (A): 36.4540 -3.1680 45.7170 REMARK 3 T TENSOR REMARK 3 T11: 0.1143 T22: 0.1564 REMARK 3 T33: 0.2057 T12: -0.0088 REMARK 3 T13: 0.0095 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.8871 L22: 0.6899 REMARK 3 L33: 0.5192 L12: -0.0071 REMARK 3 L13: 0.1777 L23: -0.1820 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: 0.0722 S13: -0.0860 REMARK 3 S21: -0.0287 S22: -0.0275 S23: -0.1091 REMARK 3 S31: 0.0322 S32: 0.0310 S33: -0.0040 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1267 C 1389 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5960 -20.1850 56.9420 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.2021 REMARK 3 T33: 0.1974 T12: 0.0072 REMARK 3 T13: 0.0263 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.3550 L22: 3.3678 REMARK 3 L33: 1.1957 L12: -0.2182 REMARK 3 L13: 0.3202 L23: -0.4733 REMARK 3 S TENSOR REMARK 3 S11: 0.0455 S12: 0.0395 S13: -0.2114 REMARK 3 S21: -0.0367 S22: -0.0131 S23: -0.1577 REMARK 3 S31: -0.0005 S32: 0.1409 S33: -0.0324 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1505 D 1671 REMARK 3 ORIGIN FOR THE GROUP (A): -7.9040 10.9480 21.0790 REMARK 3 T TENSOR REMARK 3 T11: 0.2138 T22: 0.3820 REMARK 3 T33: 0.2538 T12: 0.0217 REMARK 3 T13: -0.0443 T23: 0.0744 REMARK 3 L TENSOR REMARK 3 L11: 1.3968 L22: 0.4293 REMARK 3 L33: 0.8229 L12: 0.0333 REMARK 3 L13: 0.1027 L23: -0.1330 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: 0.4343 S13: 0.1540 REMARK 3 S21: -0.1744 S22: 0.0442 S23: 0.1032 REMARK 3 S31: -0.1318 S32: -0.1202 S33: 0.0234 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1672 D 1754 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1820 8.8230 18.3920 REMARK 3 T TENSOR REMARK 3 T11: 0.2063 T22: 0.3720 REMARK 3 T33: 0.2180 T12: -0.0344 REMARK 3 T13: -0.0359 T23: 0.0599 REMARK 3 L TENSOR REMARK 3 L11: 2.4266 L22: 0.4812 REMARK 3 L33: 1.7064 L12: -0.7167 REMARK 3 L13: -0.7511 L23: 0.2685 REMARK 3 S TENSOR REMARK 3 S11: 0.0446 S12: 0.3243 S13: 0.1000 REMARK 3 S21: -0.2175 S22: 0.0614 S23: 0.0854 REMARK 3 S31: -0.1107 S32: -0.1691 S33: -0.1061 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1755 D 1888 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5380 -11.8800 5.7330 REMARK 3 T TENSOR REMARK 3 T11: 0.2441 T22: 0.5724 REMARK 3 T33: 0.0711 T12: -0.0841 REMARK 3 T13: -0.0436 T23: -0.0977 REMARK 3 L TENSOR REMARK 3 L11: 3.6517 L22: 2.3777 REMARK 3 L33: 1.9652 L12: 0.3307 REMARK 3 L13: 0.8333 L23: 0.1103 REMARK 3 S TENSOR REMARK 3 S11: -0.0742 S12: 0.6377 S13: -0.3041 REMARK 3 S21: -0.2281 S22: 0.1146 S23: 0.1055 REMARK 3 S31: 0.2445 S32: -0.3471 S33: -0.0403 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3AEJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 03-MAR-10. REMARK 100 THE DEPOSITION ID IS D_1000029153. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : AR-NW12A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57709 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.590 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4480 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.59 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.39300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3ACZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M (NH4)2SO4, 0.1M CACODYLATE REMARK 280 BUFFER, 0.1M LI3(C3H5O(COO)3), 0.1MM PYRIDOZXAL 5'-PHOSPHATE, PH REMARK 280 6.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.67950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -135.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 MET B 501 REMARK 465 THR B 502 REMARK 465 TRP B 889 REMARK 465 MET C 1001 REMARK 465 THR C 1002 REMARK 465 MET D 1501 REMARK 465 THR D 1502 REMARK 465 ALA D 1503 REMARK 465 GLN D 1504 REMARK 465 TRP D 1889 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 52 -61.06 -130.55 REMARK 500 SER A 185 155.13 80.36 REMARK 500 LYS A 205 -113.89 -95.00 REMARK 500 SER A 332 174.46 76.29 REMARK 500 MET A 346 -94.40 -118.92 REMARK 500 SER B 685 157.67 72.67 REMARK 500 LYS B 705 -114.63 -91.70 REMARK 500 SER B 832 172.40 79.85 REMARK 500 MET B 846 -95.68 -128.89 REMARK 500 GLU B 887 31.46 -98.29 REMARK 500 SER C1185 153.08 79.16 REMARK 500 LLP C1205 -114.14 -98.38 REMARK 500 SER C1332 177.43 74.95 REMARK 500 MET C1346 -86.10 -122.17 REMARK 500 SER D1685 156.64 73.61 REMARK 500 LYS D1705 -112.67 -94.64 REMARK 500 ASN D1783 76.12 -103.09 REMARK 500 SER D1832 171.26 76.95 REMARK 500 MET D1846 -98.45 -127.57 REMARK 500 PRO D1863 -6.49 -59.71 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AA5 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AA5 B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MET C 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AA5 D 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 2009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 2010 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3ACZ RELATED DB: PDB REMARK 900 THE SAME PROTEIN COMPLEXED WITH SUBSTRATE REMARK 900 RELATED ID: 3AEL RELATED DB: PDB REMARK 900 RELATED ID: 3AEM RELATED DB: PDB REMARK 900 RELATED ID: 3AEN RELATED DB: PDB REMARK 900 RELATED ID: 3AEO RELATED DB: PDB REMARK 900 RELATED ID: 3AEP RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 1. ACCORDING TO AUTHOR, THE SUBSTITUTION OF LEU TO SER AT A308, REMARK 999 B808, C1308, D1808 ARE ALLELIC VARIATION. 2. SINCE THE GENE HAD REMARK 999 INTERNAL METHIONINE AND UPSTREAM OF THIS MET IS SIMILAR TO SHINE- REMARK 999 DALGARNO SEQUENCE, SEVERAL NUCLEOTIDES WERE REPLACED NOT TO CHANGE REMARK 999 THE AMINO ACID RESIDUES, BUT AVOID RIBOSOME BINDING IN E. COLI REMARK 999 EXPRESSION SYSTEM. DBREF 3AEJ A 1 389 UNP Q86D28 Q86D28_ENTHI 1 389 DBREF 3AEJ B 501 889 UNP Q86D28 Q86D28_ENTHI 1 389 DBREF 3AEJ C 1001 1389 UNP Q86D28 Q86D28_ENTHI 1 389 DBREF 3AEJ D 1501 1889 UNP Q86D28 Q86D28_ENTHI 1 389 SEQADV 3AEJ LEU A 308 UNP Q86D28 SER 308 SEE REMARK 999 SEQADV 3AEJ LEU B 808 UNP Q86D28 SER 308 SEE REMARK 999 SEQADV 3AEJ LEU C 1308 UNP Q86D28 SER 308 SEE REMARK 999 SEQADV 3AEJ LEU D 1808 UNP Q86D28 SER 308 SEE REMARK 999 SEQRES 1 A 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 A 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 A 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 A 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 A 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 A 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 A 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 A 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 A 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 A 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 A 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 A 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 A 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 A 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 A 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 A 389 ALA ASP ILE ALA LEU HIS SER VAL SER LYS TYR ILE ASN SEQRES 17 A 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 A 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 A 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 A 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 A 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 A 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 A 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 A 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 A 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 A 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 A 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 A 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 A 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 A 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP SEQRES 1 B 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 B 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 B 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 B 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 B 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 B 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 B 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 B 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 B 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 B 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 B 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 B 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 B 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 B 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 B 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 B 389 ALA ASP ILE ALA LEU HIS SER VAL SER LYS TYR ILE ASN SEQRES 17 B 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 B 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 B 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 B 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 B 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 B 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 B 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 B 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 B 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 B 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 B 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 B 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 B 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 B 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP SEQRES 1 C 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 C 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 C 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 C 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 C 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 C 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 C 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 C 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 C 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 C 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 C 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 C 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 C 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 C 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 C 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 C 389 ALA ASP ILE ALA LEU HIS SER VAL SER LLP TYR ILE ASN SEQRES 17 C 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 C 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 C 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 C 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 C 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 C 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 C 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 C 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 C 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 C 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 C 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 C 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 C 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 C 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP SEQRES 1 D 389 MET THR ALA GLN ASP ILE THR THR THR LEU LEU HIS PRO SEQRES 2 D 389 LYS GLY ASP HIS VAL LEU HIS SER HIS ALA TYR PRO ILE SEQRES 3 D 389 PHE GLN THR SER THR PHE CYS PHE ASP SER THR GLN GLN SEQRES 4 D 389 GLY ALA ASP LEU PHE MET GLY LYS GLY GLU GLY HIS ILE SEQRES 5 D 389 TYR SER ARG LEU GLY ASN PRO THR VAL GLU GLN PHE GLU SEQRES 6 D 389 GLU MET VAL CYS SER ILE GLU GLY ALA ALA GLY SER ALA SEQRES 7 D 389 ALA PHE GLY SER GLY MET GLY ALA ILE SER SER SER THR SEQRES 8 D 389 LEU ALA PHE LEU GLN LYS GLY ASP HIS LEU ILE ALA GLY SEQRES 9 D 389 ASP THR LEU TYR GLY CYS THR VAL SER LEU PHE THR HIS SEQRES 10 D 389 TRP LEU PRO ARG PHE GLY ILE GLU VAL ASP LEU ILE ASP SEQRES 11 D 389 THR SER ASP VAL GLU LYS VAL LYS ALA ALA TRP LYS PRO SEQRES 12 D 389 ASN THR LYS MET VAL TYR LEU GLU SER PRO ALA ASN PRO SEQRES 13 D 389 THR CYS LYS VAL SER ASP ILE LYS GLY ILE ALA VAL VAL SEQRES 14 D 389 CYS HIS GLU ARG GLY ALA ARG LEU VAL VAL ASP ALA THR SEQRES 15 D 389 PHE THR SER PRO CYS PHE LEU LYS PRO LEU GLU LEU GLY SEQRES 16 D 389 ALA ASP ILE ALA LEU HIS SER VAL SER LYS TYR ILE ASN SEQRES 17 D 389 GLY HIS GLY ASP VAL ILE GLY GLY VAL SER SER ALA LYS SEQRES 18 D 389 THR ALA GLU ASP ILE ALA THR ILE LYS PHE TYR ARG LYS SEQRES 19 D 389 ASP ALA GLY SER LEU MET ALA PRO MET ASP ALA PHE LEU SEQRES 20 D 389 CYS ALA ARG GLY MET LYS THR LEU PRO ILE ARG MET GLN SEQRES 21 D 389 ILE HIS MET GLU ASN GLY LEU LYS VAL ALA LYS PHE LEU SEQRES 22 D 389 GLU GLN HIS GLU LYS ILE VAL LYS VAL ASN HIS PRO GLY SEQRES 23 D 389 LEU GLU SER PHE PRO GLY HIS ASP ILE ALA LYS LYS GLN SEQRES 24 D 389 MET THR GLY TYR GLY SER THR PHE LEU PHE GLU MET LYS SEQRES 25 D 389 SER PHE GLU ALA ALA LYS LYS LEU MET GLU HIS LEU LYS SEQRES 26 D 389 VAL CYS THR LEU ALA VAL SER LEU GLY CYS VAL ASP THR SEQRES 27 D 389 LEU ILE GLU HIS PRO ALA SER MET THR HIS ALA ALA VAL SEQRES 28 D 389 PRO GLU ASN ILE MET ARG LYS GLN GLY ILE THR PRO GLU SEQRES 29 D 389 LEU VAL ARG ILE SER VAL GLY ILE GLU ASN VAL ASP ASP SEQRES 30 D 389 ILE ILE ALA ASP LEU LYS GLN ALA LEU GLU LEU TRP MODRES 3AEJ LLP C 1205 LYS HET LLP C1205 24 HET AA5 A2001 24 HET SO4 A2005 5 HET GOL A2009 6 HET AA5 B2002 24 HET SO4 B2006 5 HET MET C2003 9 HET SO4 C2007 5 HET GOL C2010 6 HET AA5 D2004 24 HET SO4 D2008 5 HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM AA5 N-[(3-HYDROXY-2-METHYL-5-{[(TRIHYDROXYPHOSPHORANYL) HETNAM 2 AA5 OXY]METHYL}PYRIDIN-4-YL)METHYLENE]METHIONINE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM MET METHIONINE HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 LLP C14 H22 N3 O7 P FORMUL 5 AA5 3(C13 H19 N2 O7 P S) FORMUL 6 SO4 4(O4 S 2-) FORMUL 7 GOL 2(C3 H8 O3) FORMUL 10 MET C5 H11 N O2 S FORMUL 15 HOH *419(H2 O) HELIX 1 1 ASP A 5 HIS A 12 1 8 HELIX 2 2 SER A 36 GLY A 46 1 11 HELIX 3 3 ASN A 58 GLY A 73 1 16 HELIX 4 4 SER A 82 LEU A 92 1 11 HELIX 5 5 TYR A 108 HIS A 117 1 10 HELIX 6 6 HIS A 117 PHE A 122 1 6 HELIX 7 7 ASP A 133 ALA A 140 1 8 HELIX 8 8 ASP A 162 GLY A 174 1 13 HELIX 9 9 LYS A 190 LEU A 194 5 5 HELIX 10 10 THR A 222 GLY A 237 1 16 HELIX 11 11 ALA A 241 LYS A 253 1 13 HELIX 12 12 THR A 254 HIS A 276 1 23 HELIX 13 13 GLY A 292 MET A 300 1 9 HELIX 14 14 SER A 313 GLU A 322 1 10 HELIX 15 15 PRO A 352 GLY A 360 1 9 HELIX 16 16 ASN A 374 GLU A 387 1 14 HELIX 17 17 ASP B 505 HIS B 512 1 8 HELIX 18 18 SER B 536 PHE B 544 1 9 HELIX 19 19 ASN B 558 GLY B 573 1 16 HELIX 20 20 SER B 582 LEU B 592 1 11 HELIX 21 21 TYR B 608 HIS B 617 1 10 HELIX 22 22 HIS B 617 PHE B 622 1 6 HELIX 23 23 ASP B 633 ALA B 640 1 8 HELIX 24 24 ASP B 662 GLY B 674 1 13 HELIX 25 25 THR B 684 LEU B 689 1 6 HELIX 26 26 LYS B 690 LEU B 694 5 5 HELIX 27 27 THR B 722 GLY B 737 1 16 HELIX 28 28 ALA B 741 LYS B 753 1 13 HELIX 29 29 THR B 754 HIS B 776 1 23 HELIX 30 30 GLY B 792 MET B 800 1 9 HELIX 31 31 SER B 813 HIS B 823 1 11 HELIX 32 32 HIS B 842 MET B 846 5 5 HELIX 33 33 PRO B 852 GLY B 860 1 9 HELIX 34 34 ASN B 874 GLU B 887 1 14 HELIX 35 35 ASP C 1005 HIS C 1012 1 8 HELIX 36 36 SER C 1036 GLY C 1046 1 11 HELIX 37 37 ASN C 1058 GLY C 1073 1 16 HELIX 38 38 SER C 1082 LEU C 1092 1 11 HELIX 39 39 TYR C 1108 PHE C 1122 1 15 HELIX 40 40 ASP C 1133 ALA C 1140 1 8 HELIX 41 41 ASP C 1162 GLY C 1174 1 13 HELIX 42 42 LYS C 1190 LEU C 1194 5 5 HELIX 43 43 THR C 1222 GLY C 1237 1 16 HELIX 44 44 ALA C 1241 LYS C 1253 1 13 HELIX 45 45 THR C 1254 GLN C 1275 1 22 HELIX 46 46 GLY C 1292 MET C 1300 1 9 HELIX 47 47 SER C 1313 GLU C 1322 1 10 HELIX 48 48 PRO C 1352 ARG C 1357 1 6 HELIX 49 49 ASN C 1374 GLU C 1387 1 14 HELIX 50 50 ASP D 1505 HIS D 1512 1 8 HELIX 51 51 SER D 1536 MET D 1545 1 10 HELIX 52 52 ASN D 1558 GLY D 1573 1 16 HELIX 53 53 SER D 1582 LEU D 1592 1 11 HELIX 54 54 TYR D 1608 HIS D 1617 1 10 HELIX 55 55 TRP D 1618 GLY D 1623 5 6 HELIX 56 56 ASP D 1633 TRP D 1641 1 9 HELIX 57 57 ASP D 1662 GLY D 1674 1 13 HELIX 58 58 LYS D 1690 LEU D 1694 5 5 HELIX 59 59 THR D 1722 GLY D 1737 1 16 HELIX 60 60 ALA D 1741 LYS D 1753 1 13 HELIX 61 61 THR D 1754 HIS D 1776 1 23 HELIX 62 62 GLY D 1792 MET D 1800 1 9 HELIX 63 63 SER D 1813 GLU D 1822 1 10 HELIX 64 64 PRO D 1852 GLY D 1860 1 9 HELIX 65 65 ASN D 1874 LEU D 1886 1 13 SHEET 1 A 7 GLY A 76 PHE A 80 0 SHEET 2 A 7 GLY A 216 ALA A 220 -1 O GLY A 216 N PHE A 80 SHEET 3 A 7 ILE A 198 SER A 202 -1 N HIS A 201 O VAL A 217 SHEET 4 A 7 ARG A 176 ASP A 180 1 N VAL A 179 O ILE A 198 SHEET 5 A 7 THR A 145 GLU A 151 1 N LEU A 150 O ASP A 180 SHEET 6 A 7 HIS A 100 GLY A 104 1 N ILE A 102 O TYR A 149 SHEET 7 A 7 GLU A 125 ILE A 129 1 O ILE A 129 N ALA A 103 SHEET 1 B 5 ILE A 279 ASN A 283 0 SHEET 2 B 5 THR A 306 MET A 311 -1 O GLU A 310 N LYS A 281 SHEET 3 B 5 LEU A 365 SER A 369 -1 O ILE A 368 N PHE A 307 SHEET 4 B 5 LEU A 339 GLU A 341 -1 N LEU A 339 O SER A 369 SHEET 5 B 5 THR A 328 LEU A 329 1 N THR A 328 O ILE A 340 SHEET 1 C 7 GLY B 576 PHE B 580 0 SHEET 2 C 7 GLY B 716 ALA B 720 -1 O GLY B 716 N PHE B 580 SHEET 3 C 7 ILE B 698 SER B 702 -1 N ALA B 699 O SER B 719 SHEET 4 C 7 ARG B 676 ASP B 680 1 N VAL B 679 O LEU B 700 SHEET 5 C 7 THR B 645 GLU B 651 1 N LEU B 650 O ASP B 680 SHEET 6 C 7 HIS B 600 GLY B 604 1 N ILE B 602 O TYR B 649 SHEET 7 C 7 GLU B 625 ILE B 629 1 O ILE B 629 N ALA B 603 SHEET 1 D 5 ILE B 779 ASN B 783 0 SHEET 2 D 5 THR B 806 MET B 811 -1 O LEU B 808 N ASN B 783 SHEET 3 D 5 LEU B 865 SER B 869 -1 O VAL B 866 N PHE B 809 SHEET 4 D 5 LEU B 839 GLU B 841 -1 N LEU B 839 O SER B 869 SHEET 5 D 5 THR B 828 LEU B 829 1 N THR B 828 O ILE B 840 SHEET 1 E 7 GLY C1076 PHE C1080 0 SHEET 2 E 7 GLY C1216 ALA C1220 -1 O GLY C1216 N PHE C1080 SHEET 3 E 7 ILE C1198 SER C1202 -1 N ALA C1199 O SER C1219 SHEET 4 E 7 ARG C1176 ASP C1180 1 N VAL C1179 O ILE C1198 SHEET 5 E 7 THR C1145 GLU C1151 1 N LEU C1150 O ASP C1180 SHEET 6 E 7 HIS C1100 GLY C1104 1 N ILE C1102 O MET C1147 SHEET 7 E 7 GLU C1125 ILE C1129 1 O ILE C1129 N ALA C1103 SHEET 1 F 5 ILE C1279 ASN C1283 0 SHEET 2 F 5 THR C1306 MET C1311 -1 O GLU C1310 N LYS C1281 SHEET 3 F 5 LEU C1365 SER C1369 -1 O ILE C1368 N PHE C1307 SHEET 4 F 5 LEU C1339 GLU C1341 -1 N LEU C1339 O SER C1369 SHEET 5 F 5 THR C1328 LEU C1329 1 N THR C1328 O ILE C1340 SHEET 1 G 7 GLY D1576 PHE D1580 0 SHEET 2 G 7 GLY D1716 ALA D1720 -1 O GLY D1716 N PHE D1580 SHEET 3 G 7 ILE D1698 SER D1702 -1 N ALA D1699 O SER D1719 SHEET 4 G 7 ARG D1676 ASP D1680 1 N LEU D1677 O ILE D1698 SHEET 5 G 7 THR D1645 GLU D1651 1 N LEU D1650 O VAL D1678 SHEET 6 G 7 HIS D1600 GLY D1604 1 N HIS D1600 O LYS D1646 SHEET 7 G 7 GLU D1625 ILE D1629 1 O GLU D1625 N LEU D1601 SHEET 1 H 5 ILE D1779 ASN D1783 0 SHEET 2 H 5 THR D1806 MET D1811 -1 O LEU D1808 N ASN D1783 SHEET 3 H 5 LEU D1865 SER D1869 -1 O VAL D1866 N PHE D1809 SHEET 4 H 5 LEU D1839 GLU D1841 -1 N LEU D1839 O SER D1869 SHEET 5 H 5 THR D1828 LEU D1829 1 N THR D1828 O ILE D1840 LINK C SER C1204 N LLP C1205 1555 1555 1.33 LINK C LLP C1205 N TYR C1206 1555 1555 1.34 CISPEP 1 GLU A 49 GLY A 50 0 -0.47 CISPEP 2 SER A 152 PRO A 153 0 -5.95 CISPEP 3 ASN A 155 PRO A 156 0 0.47 CISPEP 4 MET B 545 GLY B 546 0 0.64 CISPEP 5 LYS B 547 GLY B 548 0 -7.68 CISPEP 6 SER B 652 PRO B 653 0 -7.38 CISPEP 7 ASN B 655 PRO B 656 0 -1.69 CISPEP 8 SER C 1152 PRO C 1153 0 -5.37 CISPEP 9 ASN C 1155 PRO C 1156 0 0.86 CISPEP 10 GLN C 1359 GLY C 1360 0 -7.96 CISPEP 11 SER D 1652 PRO D 1653 0 -6.45 CISPEP 12 ASN D 1655 PRO D 1656 0 -0.59 SITE 1 AC1 16 SER A 82 GLY A 83 MET A 84 TYR A 108 SITE 2 AC1 16 GLU A 151 ASN A 155 ASP A 180 SER A 202 SITE 3 AC1 16 SER A 204 LYS A 205 GLY A 215 SER A 332 SITE 4 AC1 16 THR A 347 ARG A 367 TYR D1553 ARG D1555 SITE 1 AC2 15 SER B 582 GLY B 583 MET B 584 TYR B 608 SITE 2 AC2 15 ASN B 655 ASP B 680 SER B 702 SER B 704 SITE 3 AC2 15 LYS B 705 GLY B 715 SER B 832 THR B 847 SITE 4 AC2 15 ARG B 867 TYR C1053 ARG C1055 SITE 1 AC3 8 PHE B 544 TYR C1108 ASN C1155 LLP C1205 SITE 2 AC3 8 SER C1332 LEU C1333 THR C1347 ARG C1367 SITE 1 AC4 18 PHE A 44 TYR A 53 ARG A 55 SER D1582 SITE 2 AC4 18 GLY D1583 MET D1584 TYR D1608 GLU D1651 SITE 3 AC4 18 ASN D1655 ASP D1680 PHE D1683 SER D1702 SITE 4 AC4 18 SER D1704 LYS D1705 GLY D1715 SER D1832 SITE 5 AC4 18 THR D1847 ARG D1867 SITE 1 AC5 2 ARG A 176 HOH A3237 SITE 1 AC6 2 ARG B 676 HOH B3226 SITE 1 AC7 2 ARG C1176 HOH C3388 SITE 1 AC8 1 ARG D1676 SITE 1 AC9 1 HOH A3121 SITE 1 BC1 3 LYS C1312 HOH C3018 HOH C3127 CRYST1 98.738 85.359 113.664 90.00 101.92 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010128 0.000000 0.002137 0.00000 SCALE2 0.000000 0.011715 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008992 0.00000