data_3AHA # _entry.id 3AHA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3AHA pdb_00003aha 10.2210/pdb3aha/pdb RCSB RCSB029252 ? ? WWPDB D_1000029252 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-05-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-11-10 4 'Structure model' 1 3 2023-11-01 5 'Structure model' 1 4 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif 4 3 'Structure model' struct_site 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' pdbx_entry_details 9 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3AHA _pdbx_database_status.recvd_initial_deposition_date 2010-04-22 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Izumi, K.' 1 'Nakamura, S.' 2 'Nakano, H.' 3 'Shimura, K.' 4 'Sakagami, Y.' 5 'Oishi, S.' 6 'Uchiyama, S.' 7 'Ohkubo, T.' 8 'Kobayashi, Y.' 9 'Fujii, N.' 10 'Matsuoka, M.' 11 'Kodama, E.N.' 12 # _citation.id primary _citation.title 'Characterization of HIV-1 resistance to a fusion inhibitor, N36, derived from the gp41 amino terminal heptad repeat.' _citation.journal_abbrev 'Antiviral Res.' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM ARSRDR _citation.country NE _citation.journal_id_ISSN 0166-3542 _citation.journal_id_CSD 1136 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20438763 _citation.pdbx_database_id_DOI 10.1016/j.antiviral.2010.04.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Izumi, K.' 1 ? primary 'Nakamura, S.' 2 ? primary 'Nakano, H.' 3 ? primary 'Shimura, K.' 4 ? primary 'Sakagami, Y.' 5 ? primary 'Oishi, S.' 6 ? primary 'Uchiyama, S.' 7 ? primary 'Ohkubo, T.' 8 ? primary 'Kobayashi, Y.' 9 ? primary 'Fujii, N.' 10 ? primary 'Matsuoka, M.' 11 ? primary 'Kodama, E.N.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transmembrane protein gp41' 4208.886 3 ? ? 'gp41 fragment N36' ? 2 polymer man 'Transmembrane protein gp41' 4289.715 3 ? 'N126K, E137Q' 'gp41 fragment C34' ? 3 non-polymer syn '(4S)-2-METHYL-2,4-PENTANEDIOL' 118.174 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 5 water nat water 18.015 146 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes '(ACE)SDIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARIL(NH2)' XSDIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILX A,C,E ? 2 'polypeptide(L)' no yes '(ACE)WMEWDREINKYTSLIHSLIEQSQNQQEKNEQELL(NH2)' XWMEWDREINKYTSLIHSLIEQSQNQQEKNEQELLX B,D,F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '(4S)-2-METHYL-2,4-PENTANEDIOL' MPD 4 'CHLORIDE ION' CL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 SER n 1 3 ASP n 1 4 ILE n 1 5 VAL n 1 6 GLN n 1 7 GLN n 1 8 GLN n 1 9 ASN n 1 10 ASN n 1 11 LEU n 1 12 LEU n 1 13 ARG n 1 14 ALA n 1 15 ILE n 1 16 GLU n 1 17 ALA n 1 18 GLN n 1 19 GLN n 1 20 HIS n 1 21 LEU n 1 22 LEU n 1 23 GLN n 1 24 LEU n 1 25 THR n 1 26 VAL n 1 27 TRP n 1 28 GLY n 1 29 ILE n 1 30 LYS n 1 31 GLN n 1 32 LEU n 1 33 GLN n 1 34 ALA n 1 35 ARG n 1 36 ILE n 1 37 LEU n 1 38 NH2 n 2 1 ACE n 2 2 TRP n 2 3 MET n 2 4 GLU n 2 5 TRP n 2 6 ASP n 2 7 ARG n 2 8 GLU n 2 9 ILE n 2 10 ASN n 2 11 LYS n 2 12 TYR n 2 13 THR n 2 14 SER n 2 15 LEU n 2 16 ILE n 2 17 HIS n 2 18 SER n 2 19 LEU n 2 20 ILE n 2 21 GLU n 2 22 GLN n 2 23 SER n 2 24 GLN n 2 25 ASN n 2 26 GLN n 2 27 GLN n 2 28 GLU n 2 29 LYS n 2 30 ASN n 2 31 GLU n 2 32 GLN n 2 33 GLU n 2 34 LEU n 2 35 LEU n 2 36 NH2 n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HIV-1 ? env ? ? ? ? ? ? 'Human immunodeficiency virus 1' 11676 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? HIV-1 ? env ? ? ? ? ? ? 'Human immunodeficiency virus 1' 11676 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MPD non-polymer . '(4S)-2-METHYL-2,4-PENTANEDIOL' ? 'C6 H14 O2' 118.174 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 34 34 ACE ACE A . n A 1 2 SER 2 35 35 SER SER A . n A 1 3 ASP 3 36 36 ASP ASP A . n A 1 4 ILE 4 37 37 ILE ILE A . n A 1 5 VAL 5 38 38 VAL VAL A . n A 1 6 GLN 6 39 39 GLN GLN A . n A 1 7 GLN 7 40 40 GLN GLN A . n A 1 8 GLN 8 41 41 GLN GLN A . n A 1 9 ASN 9 42 42 ASN ASN A . n A 1 10 ASN 10 43 43 ASN ASN A . n A 1 11 LEU 11 44 44 LEU LEU A . n A 1 12 LEU 12 45 45 LEU LEU A . n A 1 13 ARG 13 46 46 ARG ARG A . n A 1 14 ALA 14 47 47 ALA ALA A . n A 1 15 ILE 15 48 48 ILE ILE A . n A 1 16 GLU 16 49 49 GLU GLU A . n A 1 17 ALA 17 50 50 ALA ALA A . n A 1 18 GLN 18 51 51 GLN GLN A . n A 1 19 GLN 19 52 52 GLN GLN A . n A 1 20 HIS 20 53 53 HIS HIS A . n A 1 21 LEU 21 54 54 LEU LEU A . n A 1 22 LEU 22 55 55 LEU LEU A . n A 1 23 GLN 23 56 56 GLN GLN A . n A 1 24 LEU 24 57 57 LEU LEU A . n A 1 25 THR 25 58 58 THR THR A . n A 1 26 VAL 26 59 59 VAL VAL A . n A 1 27 TRP 27 60 60 TRP TRP A . n A 1 28 GLY 28 61 61 GLY GLY A . n A 1 29 ILE 29 62 62 ILE ILE A . n A 1 30 LYS 30 63 63 LYS LYS A . n A 1 31 GLN 31 64 64 GLN GLN A . n A 1 32 LEU 32 65 65 LEU LEU A . n A 1 33 GLN 33 66 66 GLN GLN A . n A 1 34 ALA 34 67 67 ALA ALA A . n A 1 35 ARG 35 68 68 ARG ARG A . n A 1 36 ILE 36 69 69 ILE ILE A . n A 1 37 LEU 37 70 70 LEU LEU A . n A 1 38 NH2 38 71 71 NH2 NH2 A . n B 2 1 ACE 1 116 116 ACE ACE B . n B 2 2 TRP 2 117 117 TRP TRP B . n B 2 3 MET 3 118 118 MET MET B . n B 2 4 GLU 4 119 119 GLU GLU B . n B 2 5 TRP 5 120 120 TRP TRP B . n B 2 6 ASP 6 121 121 ASP ASP B . n B 2 7 ARG 7 122 122 ARG ARG B . n B 2 8 GLU 8 123 123 GLU GLU B . n B 2 9 ILE 9 124 124 ILE ILE B . n B 2 10 ASN 10 125 125 ASN ASN B . n B 2 11 LYS 11 126 126 LYS LYS B . n B 2 12 TYR 12 127 127 TYR TYR B . n B 2 13 THR 13 128 128 THR THR B . n B 2 14 SER 14 129 129 SER SER B . n B 2 15 LEU 15 130 130 LEU LEU B . n B 2 16 ILE 16 131 131 ILE ILE B . n B 2 17 HIS 17 132 132 HIS HIS B . n B 2 18 SER 18 133 133 SER SER B . n B 2 19 LEU 19 134 134 LEU LEU B . n B 2 20 ILE 20 135 135 ILE ILE B . n B 2 21 GLU 21 136 136 GLU GLU B . n B 2 22 GLN 22 137 137 GLN GLN B . n B 2 23 SER 23 138 138 SER SER B . n B 2 24 GLN 24 139 139 GLN GLN B . n B 2 25 ASN 25 140 140 ASN ASN B . n B 2 26 GLN 26 141 141 GLN GLN B . n B 2 27 GLN 27 142 142 GLN GLN B . n B 2 28 GLU 28 143 143 GLU GLU B . n B 2 29 LYS 29 144 144 LYS LYS B . n B 2 30 ASN 30 145 145 ASN ASN B . n B 2 31 GLU 31 146 146 GLU GLU B . n B 2 32 GLN 32 147 147 GLN GLN B . n B 2 33 GLU 33 148 148 GLU GLU B . n B 2 34 LEU 34 149 149 LEU LEU B . n B 2 35 LEU 35 150 150 LEU LEU B . n B 2 36 NH2 36 151 151 NH2 NH2 B . n C 1 1 ACE 1 34 34 ACE ACE C . n C 1 2 SER 2 35 35 SER SER C . n C 1 3 ASP 3 36 36 ASP ASP C . n C 1 4 ILE 4 37 37 ILE ILE C . n C 1 5 VAL 5 38 38 VAL VAL C . n C 1 6 GLN 6 39 39 GLN GLN C . n C 1 7 GLN 7 40 40 GLN GLN C . n C 1 8 GLN 8 41 41 GLN GLN C . n C 1 9 ASN 9 42 42 ASN ASN C . n C 1 10 ASN 10 43 43 ASN ASN C . n C 1 11 LEU 11 44 44 LEU LEU C . n C 1 12 LEU 12 45 45 LEU LEU C . n C 1 13 ARG 13 46 46 ARG ARG C . n C 1 14 ALA 14 47 47 ALA ALA C . n C 1 15 ILE 15 48 48 ILE ILE C . n C 1 16 GLU 16 49 49 GLU GLU C . n C 1 17 ALA 17 50 50 ALA ALA C . n C 1 18 GLN 18 51 51 GLN GLN C . n C 1 19 GLN 19 52 52 GLN GLN C . n C 1 20 HIS 20 53 53 HIS HIS C . n C 1 21 LEU 21 54 54 LEU LEU C . n C 1 22 LEU 22 55 55 LEU LEU C . n C 1 23 GLN 23 56 56 GLN GLN C . n C 1 24 LEU 24 57 57 LEU LEU C . n C 1 25 THR 25 58 58 THR THR C . n C 1 26 VAL 26 59 59 VAL VAL C . n C 1 27 TRP 27 60 60 TRP TRP C . n C 1 28 GLY 28 61 61 GLY GLY C . n C 1 29 ILE 29 62 62 ILE ILE C . n C 1 30 LYS 30 63 63 LYS LYS C . n C 1 31 GLN 31 64 64 GLN GLN C . n C 1 32 LEU 32 65 65 LEU LEU C . n C 1 33 GLN 33 66 66 GLN GLN C . n C 1 34 ALA 34 67 67 ALA ALA C . n C 1 35 ARG 35 68 68 ARG ARG C . n C 1 36 ILE 36 69 69 ILE ILE C . n C 1 37 LEU 37 70 70 LEU LEU C . n C 1 38 NH2 38 71 71 NH2 NH2 C . n D 2 1 ACE 1 116 116 ACE ACE D . n D 2 2 TRP 2 117 117 TRP TRP D . n D 2 3 MET 3 118 118 MET MET D . n D 2 4 GLU 4 119 119 GLU GLU D . n D 2 5 TRP 5 120 120 TRP TRP D . n D 2 6 ASP 6 121 121 ASP ASP D . n D 2 7 ARG 7 122 122 ARG ARG D . n D 2 8 GLU 8 123 123 GLU GLU D . n D 2 9 ILE 9 124 124 ILE ILE D . n D 2 10 ASN 10 125 125 ASN ASN D . n D 2 11 LYS 11 126 126 LYS LYS D . n D 2 12 TYR 12 127 127 TYR TYR D . n D 2 13 THR 13 128 128 THR THR D . n D 2 14 SER 14 129 129 SER SER D . n D 2 15 LEU 15 130 130 LEU LEU D . n D 2 16 ILE 16 131 131 ILE ILE D . n D 2 17 HIS 17 132 132 HIS HIS D . n D 2 18 SER 18 133 133 SER SER D . n D 2 19 LEU 19 134 134 LEU LEU D . n D 2 20 ILE 20 135 135 ILE ILE D . n D 2 21 GLU 21 136 136 GLU GLU D . n D 2 22 GLN 22 137 137 GLN GLN D . n D 2 23 SER 23 138 138 SER SER D . n D 2 24 GLN 24 139 139 GLN GLN D . n D 2 25 ASN 25 140 140 ASN ASN D . n D 2 26 GLN 26 141 141 GLN GLN D . n D 2 27 GLN 27 142 142 GLN GLN D . n D 2 28 GLU 28 143 143 GLU GLU D . n D 2 29 LYS 29 144 144 LYS LYS D . n D 2 30 ASN 30 145 145 ASN ASN D . n D 2 31 GLU 31 146 146 GLU GLU D . n D 2 32 GLN 32 147 147 GLN GLN D . n D 2 33 GLU 33 148 148 GLU GLU D . n D 2 34 LEU 34 149 149 LEU LEU D . n D 2 35 LEU 35 150 150 LEU LEU D . n D 2 36 NH2 36 151 151 NH2 NH2 D . n E 1 1 ACE 1 34 34 ACE ACE E . n E 1 2 SER 2 35 35 SER SER E . n E 1 3 ASP 3 36 36 ASP ASP E . n E 1 4 ILE 4 37 37 ILE ILE E . n E 1 5 VAL 5 38 38 VAL VAL E . n E 1 6 GLN 6 39 39 GLN GLN E . n E 1 7 GLN 7 40 40 GLN GLN E . n E 1 8 GLN 8 41 41 GLN GLN E . n E 1 9 ASN 9 42 42 ASN ASN E . n E 1 10 ASN 10 43 43 ASN ASN E . n E 1 11 LEU 11 44 44 LEU LEU E . n E 1 12 LEU 12 45 45 LEU LEU E . n E 1 13 ARG 13 46 46 ARG ARG E . n E 1 14 ALA 14 47 47 ALA ALA E . n E 1 15 ILE 15 48 48 ILE ILE E . n E 1 16 GLU 16 49 49 GLU GLU E . n E 1 17 ALA 17 50 50 ALA ALA E . n E 1 18 GLN 18 51 51 GLN GLN E . n E 1 19 GLN 19 52 52 GLN GLN E . n E 1 20 HIS 20 53 53 HIS HIS E . n E 1 21 LEU 21 54 54 LEU LEU E . n E 1 22 LEU 22 55 55 LEU LEU E . n E 1 23 GLN 23 56 56 GLN GLN E . n E 1 24 LEU 24 57 57 LEU LEU E . n E 1 25 THR 25 58 58 THR THR E . n E 1 26 VAL 26 59 59 VAL VAL E . n E 1 27 TRP 27 60 60 TRP TRP E . n E 1 28 GLY 28 61 61 GLY GLY E . n E 1 29 ILE 29 62 62 ILE ILE E . n E 1 30 LYS 30 63 63 LYS LYS E . n E 1 31 GLN 31 64 64 GLN GLN E . n E 1 32 LEU 32 65 65 LEU LEU E . n E 1 33 GLN 33 66 66 GLN GLN E . n E 1 34 ALA 34 67 67 ALA ALA E . n E 1 35 ARG 35 68 68 ARG ARG E . n E 1 36 ILE 36 69 69 ILE ILE E . n E 1 37 LEU 37 70 70 LEU LEU E . n E 1 38 NH2 38 71 71 NH2 NH2 E . n F 2 1 ACE 1 116 116 ACE ACE F . n F 2 2 TRP 2 117 117 TRP TRP F . n F 2 3 MET 3 118 118 MET MET F . n F 2 4 GLU 4 119 119 GLU GLU F . n F 2 5 TRP 5 120 120 TRP TRP F . n F 2 6 ASP 6 121 121 ASP ASP F . n F 2 7 ARG 7 122 122 ARG ARG F . n F 2 8 GLU 8 123 123 GLU GLU F . n F 2 9 ILE 9 124 124 ILE ILE F . n F 2 10 ASN 10 125 125 ASN ASN F . n F 2 11 LYS 11 126 126 LYS LYS F . n F 2 12 TYR 12 127 127 TYR TYR F . n F 2 13 THR 13 128 128 THR THR F . n F 2 14 SER 14 129 129 SER SER F . n F 2 15 LEU 15 130 130 LEU LEU F . n F 2 16 ILE 16 131 131 ILE ILE F . n F 2 17 HIS 17 132 132 HIS HIS F . n F 2 18 SER 18 133 133 SER SER F . n F 2 19 LEU 19 134 134 LEU LEU F . n F 2 20 ILE 20 135 135 ILE ILE F . n F 2 21 GLU 21 136 136 GLU GLU F . n F 2 22 GLN 22 137 137 GLN GLN F . n F 2 23 SER 23 138 138 SER SER F . n F 2 24 GLN 24 139 139 GLN GLN F . n F 2 25 ASN 25 140 140 ASN ASN F . n F 2 26 GLN 26 141 141 GLN GLN F . n F 2 27 GLN 27 142 142 GLN GLN F . n F 2 28 GLU 28 143 143 GLU GLU F . n F 2 29 LYS 29 144 144 LYS LYS F . n F 2 30 ASN 30 145 145 ASN ASN F . n F 2 31 GLU 31 146 146 GLU GLU F . n F 2 32 GLN 32 147 147 GLN GLN F . n F 2 33 GLU 33 148 148 GLU GLU F . n F 2 34 LEU 34 149 149 LEU LEU F . n F 2 35 LEU 35 150 150 LEU LEU F . n F 2 36 NH2 36 151 151 NH2 NH2 F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 MPD 1 5001 5001 MPD MPD B . H 4 CL 1 2 2 CL CL C . I 4 CL 1 1 1 CL CL D . J 5 HOH 1 4 4 HOH HOH A . J 5 HOH 2 6 6 HOH HOH A . J 5 HOH 3 12 12 HOH HOH A . J 5 HOH 4 31 31 HOH HOH A . J 5 HOH 5 32 32 HOH HOH A . J 5 HOH 6 72 72 HOH HOH A . J 5 HOH 7 73 73 HOH HOH A . J 5 HOH 8 74 74 HOH HOH A . J 5 HOH 9 75 75 HOH HOH A . J 5 HOH 10 76 71 HOH HOH A . J 5 HOH 11 89 89 HOH HOH A . J 5 HOH 12 102 102 HOH HOH A . J 5 HOH 13 108 108 HOH HOH A . J 5 HOH 14 130 130 HOH HOH A . J 5 HOH 15 135 135 HOH HOH A . J 5 HOH 16 180 180 HOH HOH A . J 5 HOH 17 181 181 HOH HOH A . J 5 HOH 18 182 182 HOH HOH A . J 5 HOH 19 184 184 HOH HOH A . K 5 HOH 1 9 9 HOH HOH B . K 5 HOH 2 10 10 HOH HOH B . K 5 HOH 3 16 16 HOH HOH B . K 5 HOH 4 17 17 HOH HOH B . K 5 HOH 5 22 22 HOH HOH B . K 5 HOH 6 24 24 HOH HOH B . K 5 HOH 7 25 25 HOH HOH B . K 5 HOH 8 29 29 HOH HOH B . K 5 HOH 9 33 33 HOH HOH B . K 5 HOH 10 34 34 HOH HOH B . K 5 HOH 11 46 46 HOH HOH B . K 5 HOH 12 48 48 HOH HOH B . K 5 HOH 13 53 53 HOH HOH B . K 5 HOH 14 77 77 HOH HOH B . K 5 HOH 15 79 79 HOH HOH B . K 5 HOH 16 80 80 HOH HOH B . K 5 HOH 17 100 100 HOH HOH B . K 5 HOH 18 104 104 HOH HOH B . K 5 HOH 19 111 111 HOH HOH B . K 5 HOH 20 115 115 HOH HOH B . K 5 HOH 21 152 152 HOH HOH B . K 5 HOH 22 153 153 HOH HOH B . K 5 HOH 23 154 154 HOH HOH B . K 5 HOH 24 155 155 HOH HOH B . K 5 HOH 25 156 156 HOH HOH B . K 5 HOH 26 157 157 HOH HOH B . K 5 HOH 27 158 151 HOH HOH B . K 5 HOH 28 170 170 HOH HOH B . K 5 HOH 29 171 171 HOH HOH B . K 5 HOH 30 172 172 HOH HOH B . K 5 HOH 31 173 173 HOH HOH B . K 5 HOH 32 174 174 HOH HOH B . L 5 HOH 1 3 3 HOH HOH C . L 5 HOH 2 5 5 HOH HOH C . L 5 HOH 3 11 11 HOH HOH C . L 5 HOH 4 13 13 HOH HOH C . L 5 HOH 5 20 20 HOH HOH C . L 5 HOH 6 26 26 HOH HOH C . L 5 HOH 7 28 28 HOH HOH C . L 5 HOH 8 72 72 HOH HOH C . L 5 HOH 9 73 73 HOH HOH C . L 5 HOH 10 74 74 HOH HOH C . L 5 HOH 11 75 75 HOH HOH C . L 5 HOH 12 76 76 HOH HOH C . L 5 HOH 13 77 71 HOH HOH C . L 5 HOH 14 86 86 HOH HOH C . L 5 HOH 15 95 95 HOH HOH C . L 5 HOH 16 96 96 HOH HOH C . L 5 HOH 17 99 99 HOH HOH C . L 5 HOH 18 103 103 HOH HOH C . L 5 HOH 19 136 136 HOH HOH C . L 5 HOH 20 142 142 HOH HOH C . L 5 HOH 21 178 178 HOH HOH C . M 5 HOH 1 15 15 HOH HOH D . M 5 HOH 2 18 18 HOH HOH D . M 5 HOH 3 21 21 HOH HOH D . M 5 HOH 4 27 27 HOH HOH D . M 5 HOH 5 37 37 HOH HOH D . M 5 HOH 6 44 44 HOH HOH D . M 5 HOH 7 45 45 HOH HOH D . M 5 HOH 8 51 51 HOH HOH D . M 5 HOH 9 52 52 HOH HOH D . M 5 HOH 10 54 54 HOH HOH D . M 5 HOH 11 57 57 HOH HOH D . M 5 HOH 12 58 58 HOH HOH D . M 5 HOH 13 61 61 HOH HOH D . M 5 HOH 14 65 65 HOH HOH D . M 5 HOH 15 71 71 HOH HOH D . M 5 HOH 16 75 75 HOH HOH D . M 5 HOH 17 76 76 HOH HOH D . M 5 HOH 18 83 83 HOH HOH D . M 5 HOH 19 90 90 HOH HOH D . M 5 HOH 20 91 91 HOH HOH D . M 5 HOH 21 101 101 HOH HOH D . M 5 HOH 22 107 107 HOH HOH D . M 5 HOH 23 152 152 HOH HOH D . M 5 HOH 24 153 153 HOH HOH D . M 5 HOH 25 154 154 HOH HOH D . M 5 HOH 26 155 155 HOH HOH D . M 5 HOH 27 156 156 HOH HOH D . M 5 HOH 28 157 157 HOH HOH D . M 5 HOH 29 161 161 HOH HOH D . M 5 HOH 30 185 185 HOH HOH D . N 5 HOH 1 1 1 HOH HOH E . N 5 HOH 2 2 2 HOH HOH E . N 5 HOH 3 7 7 HOH HOH E . N 5 HOH 4 14 14 HOH HOH E . N 5 HOH 5 23 23 HOH HOH E . N 5 HOH 6 30 30 HOH HOH E . N 5 HOH 7 72 72 HOH HOH E . N 5 HOH 8 73 73 HOH HOH E . N 5 HOH 9 74 74 HOH HOH E . N 5 HOH 10 75 75 HOH HOH E . N 5 HOH 11 105 105 HOH HOH E . N 5 HOH 12 106 106 HOH HOH E . N 5 HOH 13 112 112 HOH HOH E . N 5 HOH 14 113 113 HOH HOH E . N 5 HOH 15 114 114 HOH HOH E . N 5 HOH 16 121 121 HOH HOH E . N 5 HOH 17 129 129 HOH HOH E . N 5 HOH 18 130 71 HOH HOH E . N 5 HOH 19 151 151 HOH HOH E . N 5 HOH 20 158 158 HOH HOH E . N 5 HOH 21 159 159 HOH HOH E . N 5 HOH 22 175 175 HOH HOH E . N 5 HOH 23 176 176 HOH HOH E . N 5 HOH 24 179 179 HOH HOH E . O 5 HOH 1 8 8 HOH HOH F . O 5 HOH 2 19 19 HOH HOH F . O 5 HOH 3 50 50 HOH HOH F . O 5 HOH 4 56 56 HOH HOH F . O 5 HOH 5 62 62 HOH HOH F . O 5 HOH 6 63 63 HOH HOH F . O 5 HOH 7 64 64 HOH HOH F . O 5 HOH 8 74 74 HOH HOH F . O 5 HOH 9 84 84 HOH HOH F . O 5 HOH 10 88 88 HOH HOH F . O 5 HOH 11 98 98 HOH HOH F . O 5 HOH 12 109 109 HOH HOH F . O 5 HOH 13 152 152 HOH HOH F . O 5 HOH 14 153 153 HOH HOH F . O 5 HOH 15 154 154 HOH HOH F . O 5 HOH 16 155 155 HOH HOH F . O 5 HOH 17 156 151 HOH HOH F . O 5 HOH 18 157 157 HOH HOH F . O 5 HOH 19 158 158 HOH HOH F . O 5 HOH 20 177 177 HOH HOH F . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.2.0019 ? 3 CrystalClear 'data reduction' . ? 4 CrystalClear 'data scaling' . ? 5 # _cell.entry_id 3AHA _cell.length_a 88.632 _cell.length_b 50.479 _cell.length_c 56.154 _cell.angle_alpha 90.00 _cell.angle_beta 90.88 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3AHA _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.entry_id 3AHA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.46 _exptl_crystal.density_percent_sol 50.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '80mM ammonium chloride, 16% 2-methylpentan-2,4-diol, 25% isopropanol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2005-08-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 3AHA _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 1.0 _reflns.d_resolution_low 35 _reflns.d_resolution_high 1.7 _reflns.number_obs 27434 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 20.0 _reflns.pdbx_redundancy 3.61 _reflns.pdbx_netI_over_sigmaI ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 99.95 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3AHA _refine.ls_number_reflns_obs 25818 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.88 _refine.ls_d_res_high 1.70 _refine.ls_percent_reflns_obs 99.10 _refine.ls_R_factor_obs 0.19021 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18864 _refine.ls_R_factor_R_free 0.21933 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1362 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.945 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.B_iso_mean 12.491 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.01 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1AIK' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.108 _refine.pdbx_overall_ESU_R_Free 0.105 _refine.overall_SU_ML 0.064 _refine.overall_SU_B 1.874 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1803 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 146 _refine_hist.number_atoms_total 1959 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 23.88 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.021 ? 1831 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.989 1.956 ? 2455 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.202 5.000 ? 198 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.498 26.667 ? 108 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.073 15.000 ? 351 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.647 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.071 0.200 ? 274 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1335 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.200 0.200 ? 863 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.291 0.200 ? 1271 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.122 0.200 ? 78 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.222 0.200 ? 51 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.116 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.786 1.500 ? 1104 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.194 2.000 ? 1695 'X-RAY DIFFRACTION' ? r_scbond_it 2.359 3.000 ? 838 'X-RAY DIFFRACTION' ? r_scangle_it 3.826 4.500 ? 760 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.number_reflns_R_work 1903 _refine_ls_shell.R_factor_R_work 0.241 _refine_ls_shell.percent_reflns_obs 99.95 _refine_ls_shell.R_factor_R_free 0.328 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 85 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3AHA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3AHA _struct.title 'Crystal structure of the complex between gp41 fragments N36 and C34 mutant N126K/E137Q' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3AHA _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'coiled-coil, VIRAL PROTEIN-INHIBITOR COMPLEX, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 1 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 5 ? N N N 5 ? O N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q72502_9HIV1 Q72502 1 SDIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARI 544 ? 2 UNP ENV_HV1LW Q70626 2 WMEWDREINNYTSLIHSLIEESQNQQEKNEQEL 628 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3AHA A 2 ? 36 ? Q72502 544 ? 578 ? 35 69 2 2 3AHA B 2 ? 34 ? Q70626 628 ? 660 ? 117 149 3 1 3AHA C 2 ? 36 ? Q72502 544 ? 578 ? 35 69 4 2 3AHA D 2 ? 34 ? Q70626 628 ? 660 ? 117 149 5 1 3AHA E 2 ? 36 ? Q72502 544 ? 578 ? 35 69 6 2 3AHA F 2 ? 34 ? Q70626 628 ? 660 ? 117 149 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3AHA ACE A 1 ? UNP Q72502 ? ? acetylation 34 1 1 3AHA NH2 A 38 ? UNP Q72502 ? ? amidation 71 2 2 3AHA ACE B 1 ? UNP Q70626 ? ? acetylation 116 3 2 3AHA LYS B 11 ? UNP Q70626 ASN 637 'engineered mutation' 126 4 2 3AHA GLN B 22 ? UNP Q70626 GLU 648 'engineered mutation' 137 5 2 3AHA NH2 B 36 ? UNP Q70626 ? ? amidation 151 6 3 3AHA ACE C 1 ? UNP Q72502 ? ? acetylation 34 7 3 3AHA NH2 C 38 ? UNP Q72502 ? ? amidation 71 8 4 3AHA ACE D 1 ? UNP Q70626 ? ? acetylation 116 9 4 3AHA LYS D 11 ? UNP Q70626 ASN 637 'engineered mutation' 126 10 4 3AHA GLN D 22 ? UNP Q70626 GLU 648 'engineered mutation' 137 11 4 3AHA NH2 D 36 ? UNP Q70626 ? ? amidation 151 12 5 3AHA ACE E 1 ? UNP Q72502 ? ? acetylation 34 13 5 3AHA NH2 E 38 ? UNP Q72502 ? ? amidation 71 14 6 3AHA ACE F 1 ? UNP Q70626 ? ? acetylation 116 15 6 3AHA LYS F 11 ? UNP Q70626 ASN 637 'engineered mutation' 126 16 6 3AHA GLN F 22 ? UNP Q70626 GLU 648 'engineered mutation' 137 17 6 3AHA NH2 F 36 ? UNP Q70626 ? ? amidation 151 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 13670 ? 1 MORE -101 ? 1 'SSA (A^2)' 10890 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? LEU A 37 ? SER A 35 LEU A 70 1 ? 36 HELX_P HELX_P2 2 TRP B 2 ? LEU B 35 ? TRP B 117 LEU B 150 1 ? 34 HELX_P HELX_P3 3 SER C 2 ? LEU C 37 ? SER C 35 LEU C 70 1 ? 36 HELX_P HELX_P4 4 TRP D 2 ? LEU D 34 ? TRP D 117 LEU D 149 1 ? 33 HELX_P HELX_P5 5 SER E 2 ? LEU E 37 ? SER E 35 LEU E 70 1 ? 36 HELX_P HELX_P6 6 TRP F 2 ? LEU F 34 ? TRP F 117 LEU F 149 1 ? 33 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A SER 2 N ? ? A ACE 34 A SER 35 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale2 covale both ? A LEU 37 C ? ? ? 1_555 A NH2 38 N ? ? A LEU 70 A NH2 71 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? B ACE 1 C ? ? ? 1_555 B TRP 2 N ? ? B ACE 116 B TRP 117 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale4 covale both ? B LEU 35 C ? ? ? 1_555 B NH2 36 N ? ? B LEU 150 B NH2 151 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale5 covale both ? C ACE 1 C ? ? ? 1_555 C SER 2 N ? ? C ACE 34 C SER 35 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale6 covale both ? C LEU 37 C ? ? ? 1_555 C NH2 38 N ? ? C LEU 70 C NH2 71 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale7 covale both ? D ACE 1 C ? ? ? 1_555 D TRP 2 N ? ? D ACE 116 D TRP 117 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale8 covale both ? D LEU 35 C ? ? ? 1_555 D NH2 36 N ? ? D LEU 150 D NH2 151 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale9 covale both ? E ACE 1 C ? ? ? 1_555 E SER 2 N ? ? E ACE 34 E SER 35 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale10 covale both ? E LEU 37 C ? ? ? 1_555 E NH2 38 N ? ? E LEU 70 E NH2 71 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale11 covale both ? F ACE 1 C ? ? ? 1_555 F TRP 2 N ? ? F ACE 116 F TRP 117 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale12 covale both ? F LEU 35 C ? ? ? 1_555 F NH2 36 N ? ? F LEU 150 F NH2 151 1_555 ? ? ? ? ? ? ? 1.331 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 ACE A 1 ? SER A 2 ? ACE A 34 ? 1_555 SER A 35 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 2 ACE B 1 ? TRP B 2 ? ACE B 116 ? 1_555 TRP B 117 ? 1_555 . . TRP 16 ACE None 'Terminal acetylation' 3 ACE C 1 ? SER C 2 ? ACE C 34 ? 1_555 SER C 35 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 4 ACE D 1 ? TRP D 2 ? ACE D 116 ? 1_555 TRP D 117 ? 1_555 . . TRP 16 ACE None 'Terminal acetylation' 5 ACE E 1 ? SER E 2 ? ACE E 34 ? 1_555 SER E 35 ? 1_555 . . SER 6 ACE None 'Terminal acetylation' 6 ACE F 1 ? TRP F 2 ? ACE F 116 ? 1_555 TRP F 117 ? 1_555 . . TRP 16 ACE None 'Terminal acetylation' 7 NH2 A 38 ? LEU A 37 ? NH2 A 71 ? 1_555 LEU A 70 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 8 NH2 B 36 ? LEU B 35 ? NH2 B 151 ? 1_555 LEU B 150 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 9 NH2 C 38 ? LEU C 37 ? NH2 C 71 ? 1_555 LEU C 70 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 10 NH2 D 36 ? LEU D 35 ? NH2 D 151 ? 1_555 LEU D 150 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 11 NH2 E 38 ? LEU E 37 ? NH2 E 71 ? 1_555 LEU E 70 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' 12 NH2 F 36 ? LEU F 35 ? NH2 F 151 ? 1_555 LEU F 150 ? 1_555 . . LEU 14 NH2 None 'Terminal amidation' # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B MPD 5001 ? 5 'BINDING SITE FOR RESIDUE MPD B 5001' AC2 Software C CL 2 ? 3 'BINDING SITE FOR RESIDUE CL C 2' AC3 Software D CL 1 ? 4 'BINDING SITE FOR RESIDUE CL D 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU B 28 ? GLU B 143 . ? 1_555 ? 2 AC1 5 HOH K . ? HOH B 171 . ? 1_555 ? 3 AC1 5 HIS C 20 ? HIS C 53 . ? 2_555 ? 4 AC1 5 GLN C 23 ? GLN C 56 . ? 2_555 ? 5 AC1 5 TYR D 12 ? TYR D 127 . ? 2_555 ? 6 AC2 3 GLN A 8 ? GLN A 41 . ? 1_555 ? 7 AC2 3 GLN C 8 ? GLN C 41 . ? 1_555 ? 8 AC2 3 GLN E 8 ? GLN E 41 . ? 1_555 ? 9 AC3 4 TRP D 2 ? TRP D 117 . ? 2_556 ? 10 AC3 4 TRP D 2 ? TRP D 117 . ? 1_555 ? 11 AC3 4 HOH M . ? HOH D 185 . ? 2_556 ? 12 AC3 4 HOH M . ? HOH D 185 . ? 1_555 ? # _pdbx_entry_details.entry_id 3AHA _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 O A ILE 69 ? ? C A ILE 69 ? ? N A LEU 70 ? ? 103.42 122.70 -19.28 1.60 Y 2 1 O C ILE 69 ? ? C C ILE 69 ? ? N C LEU 70 ? ? 112.88 122.70 -9.82 1.60 Y # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id ILE _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 69 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle -24.70 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 D CL 1 ? I CL . 2 1 D HOH 185 ? M HOH . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CL CL CL N N 81 GLN N N N N 82 GLN CA C N S 83 GLN C C N N 84 GLN O O N N 85 GLN CB C N N 86 GLN CG C N N 87 GLN CD C N N 88 GLN OE1 O N N 89 GLN NE2 N N N 90 GLN OXT O N N 91 GLN H H N N 92 GLN H2 H N N 93 GLN HA H N N 94 GLN HB2 H N N 95 GLN HB3 H N N 96 GLN HG2 H N N 97 GLN HG3 H N N 98 GLN HE21 H N N 99 GLN HE22 H N N 100 GLN HXT H N N 101 GLU N N N N 102 GLU CA C N S 103 GLU C C N N 104 GLU O O N N 105 GLU CB C N N 106 GLU CG C N N 107 GLU CD C N N 108 GLU OE1 O N N 109 GLU OE2 O N N 110 GLU OXT O N N 111 GLU H H N N 112 GLU H2 H N N 113 GLU HA H N N 114 GLU HB2 H N N 115 GLU HB3 H N N 116 GLU HG2 H N N 117 GLU HG3 H N N 118 GLU HE2 H N N 119 GLU HXT H N N 120 GLY N N N N 121 GLY CA C N N 122 GLY C C N N 123 GLY O O N N 124 GLY OXT O N N 125 GLY H H N N 126 GLY H2 H N N 127 GLY HA2 H N N 128 GLY HA3 H N N 129 GLY HXT H N N 130 HIS N N N N 131 HIS CA C N S 132 HIS C C N N 133 HIS O O N N 134 HIS CB C N N 135 HIS CG C Y N 136 HIS ND1 N Y N 137 HIS CD2 C Y N 138 HIS CE1 C Y N 139 HIS NE2 N Y N 140 HIS OXT O N N 141 HIS H H N N 142 HIS H2 H N N 143 HIS HA H N N 144 HIS HB2 H N N 145 HIS HB3 H N N 146 HIS HD1 H N N 147 HIS HD2 H N N 148 HIS HE1 H N N 149 HIS HE2 H N N 150 HIS HXT H N N 151 HOH O O N N 152 HOH H1 H N N 153 HOH H2 H N N 154 ILE N N N N 155 ILE CA C N S 156 ILE C C N N 157 ILE O O N N 158 ILE CB C N S 159 ILE CG1 C N N 160 ILE CG2 C N N 161 ILE CD1 C N N 162 ILE OXT O N N 163 ILE H H N N 164 ILE H2 H N N 165 ILE HA H N N 166 ILE HB H N N 167 ILE HG12 H N N 168 ILE HG13 H N N 169 ILE HG21 H N N 170 ILE HG22 H N N 171 ILE HG23 H N N 172 ILE HD11 H N N 173 ILE HD12 H N N 174 ILE HD13 H N N 175 ILE HXT H N N 176 LEU N N N N 177 LEU CA C N S 178 LEU C C N N 179 LEU O O N N 180 LEU CB C N N 181 LEU CG C N N 182 LEU CD1 C N N 183 LEU CD2 C N N 184 LEU OXT O N N 185 LEU H H N N 186 LEU H2 H N N 187 LEU HA H N N 188 LEU HB2 H N N 189 LEU HB3 H N N 190 LEU HG H N N 191 LEU HD11 H N N 192 LEU HD12 H N N 193 LEU HD13 H N N 194 LEU HD21 H N N 195 LEU HD22 H N N 196 LEU HD23 H N N 197 LEU HXT H N N 198 LYS N N N N 199 LYS CA C N S 200 LYS C C N N 201 LYS O O N N 202 LYS CB C N N 203 LYS CG C N N 204 LYS CD C N N 205 LYS CE C N N 206 LYS NZ N N N 207 LYS OXT O N N 208 LYS H H N N 209 LYS H2 H N N 210 LYS HA H N N 211 LYS HB2 H N N 212 LYS HB3 H N N 213 LYS HG2 H N N 214 LYS HG3 H N N 215 LYS HD2 H N N 216 LYS HD3 H N N 217 LYS HE2 H N N 218 LYS HE3 H N N 219 LYS HZ1 H N N 220 LYS HZ2 H N N 221 LYS HZ3 H N N 222 LYS HXT H N N 223 MET N N N N 224 MET CA C N S 225 MET C C N N 226 MET O O N N 227 MET CB C N N 228 MET CG C N N 229 MET SD S N N 230 MET CE C N N 231 MET OXT O N N 232 MET H H N N 233 MET H2 H N N 234 MET HA H N N 235 MET HB2 H N N 236 MET HB3 H N N 237 MET HG2 H N N 238 MET HG3 H N N 239 MET HE1 H N N 240 MET HE2 H N N 241 MET HE3 H N N 242 MET HXT H N N 243 MPD C1 C N N 244 MPD C2 C N N 245 MPD O2 O N N 246 MPD CM C N N 247 MPD C3 C N N 248 MPD C4 C N S 249 MPD O4 O N N 250 MPD C5 C N N 251 MPD H11 H N N 252 MPD H12 H N N 253 MPD H13 H N N 254 MPD HO2 H N N 255 MPD HM1 H N N 256 MPD HM2 H N N 257 MPD HM3 H N N 258 MPD H31 H N N 259 MPD H32 H N N 260 MPD H4 H N N 261 MPD HO4 H N N 262 MPD H51 H N N 263 MPD H52 H N N 264 MPD H53 H N N 265 NH2 N N N N 266 NH2 HN1 H N N 267 NH2 HN2 H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 TRP N N N N 300 TRP CA C N S 301 TRP C C N N 302 TRP O O N N 303 TRP CB C N N 304 TRP CG C Y N 305 TRP CD1 C Y N 306 TRP CD2 C Y N 307 TRP NE1 N Y N 308 TRP CE2 C Y N 309 TRP CE3 C Y N 310 TRP CZ2 C Y N 311 TRP CZ3 C Y N 312 TRP CH2 C Y N 313 TRP OXT O N N 314 TRP H H N N 315 TRP H2 H N N 316 TRP HA H N N 317 TRP HB2 H N N 318 TRP HB3 H N N 319 TRP HD1 H N N 320 TRP HE1 H N N 321 TRP HE3 H N N 322 TRP HZ2 H N N 323 TRP HZ3 H N N 324 TRP HH2 H N N 325 TRP HXT H N N 326 TYR N N N N 327 TYR CA C N S 328 TYR C C N N 329 TYR O O N N 330 TYR CB C N N 331 TYR CG C Y N 332 TYR CD1 C Y N 333 TYR CD2 C Y N 334 TYR CE1 C Y N 335 TYR CE2 C Y N 336 TYR CZ C Y N 337 TYR OH O N N 338 TYR OXT O N N 339 TYR H H N N 340 TYR H2 H N N 341 TYR HA H N N 342 TYR HB2 H N N 343 TYR HB3 H N N 344 TYR HD1 H N N 345 TYR HD2 H N N 346 TYR HE1 H N N 347 TYR HE2 H N N 348 TYR HH H N N 349 TYR HXT H N N 350 VAL N N N N 351 VAL CA C N S 352 VAL C C N N 353 VAL O O N N 354 VAL CB C N N 355 VAL CG1 C N N 356 VAL CG2 C N N 357 VAL OXT O N N 358 VAL H H N N 359 VAL H2 H N N 360 VAL HA H N N 361 VAL HB H N N 362 VAL HG11 H N N 363 VAL HG12 H N N 364 VAL HG13 H N N 365 VAL HG21 H N N 366 VAL HG22 H N N 367 VAL HG23 H N N 368 VAL HXT H N N 369 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 GLN N CA sing N N 76 GLN N H sing N N 77 GLN N H2 sing N N 78 GLN CA C sing N N 79 GLN CA CB sing N N 80 GLN CA HA sing N N 81 GLN C O doub N N 82 GLN C OXT sing N N 83 GLN CB CG sing N N 84 GLN CB HB2 sing N N 85 GLN CB HB3 sing N N 86 GLN CG CD sing N N 87 GLN CG HG2 sing N N 88 GLN CG HG3 sing N N 89 GLN CD OE1 doub N N 90 GLN CD NE2 sing N N 91 GLN NE2 HE21 sing N N 92 GLN NE2 HE22 sing N N 93 GLN OXT HXT sing N N 94 GLU N CA sing N N 95 GLU N H sing N N 96 GLU N H2 sing N N 97 GLU CA C sing N N 98 GLU CA CB sing N N 99 GLU CA HA sing N N 100 GLU C O doub N N 101 GLU C OXT sing N N 102 GLU CB CG sing N N 103 GLU CB HB2 sing N N 104 GLU CB HB3 sing N N 105 GLU CG CD sing N N 106 GLU CG HG2 sing N N 107 GLU CG HG3 sing N N 108 GLU CD OE1 doub N N 109 GLU CD OE2 sing N N 110 GLU OE2 HE2 sing N N 111 GLU OXT HXT sing N N 112 GLY N CA sing N N 113 GLY N H sing N N 114 GLY N H2 sing N N 115 GLY CA C sing N N 116 GLY CA HA2 sing N N 117 GLY CA HA3 sing N N 118 GLY C O doub N N 119 GLY C OXT sing N N 120 GLY OXT HXT sing N N 121 HIS N CA sing N N 122 HIS N H sing N N 123 HIS N H2 sing N N 124 HIS CA C sing N N 125 HIS CA CB sing N N 126 HIS CA HA sing N N 127 HIS C O doub N N 128 HIS C OXT sing N N 129 HIS CB CG sing N N 130 HIS CB HB2 sing N N 131 HIS CB HB3 sing N N 132 HIS CG ND1 sing Y N 133 HIS CG CD2 doub Y N 134 HIS ND1 CE1 doub Y N 135 HIS ND1 HD1 sing N N 136 HIS CD2 NE2 sing Y N 137 HIS CD2 HD2 sing N N 138 HIS CE1 NE2 sing Y N 139 HIS CE1 HE1 sing N N 140 HIS NE2 HE2 sing N N 141 HIS OXT HXT sing N N 142 HOH O H1 sing N N 143 HOH O H2 sing N N 144 ILE N CA sing N N 145 ILE N H sing N N 146 ILE N H2 sing N N 147 ILE CA C sing N N 148 ILE CA CB sing N N 149 ILE CA HA sing N N 150 ILE C O doub N N 151 ILE C OXT sing N N 152 ILE CB CG1 sing N N 153 ILE CB CG2 sing N N 154 ILE CB HB sing N N 155 ILE CG1 CD1 sing N N 156 ILE CG1 HG12 sing N N 157 ILE CG1 HG13 sing N N 158 ILE CG2 HG21 sing N N 159 ILE CG2 HG22 sing N N 160 ILE CG2 HG23 sing N N 161 ILE CD1 HD11 sing N N 162 ILE CD1 HD12 sing N N 163 ILE CD1 HD13 sing N N 164 ILE OXT HXT sing N N 165 LEU N CA sing N N 166 LEU N H sing N N 167 LEU N H2 sing N N 168 LEU CA C sing N N 169 LEU CA CB sing N N 170 LEU CA HA sing N N 171 LEU C O doub N N 172 LEU C OXT sing N N 173 LEU CB CG sing N N 174 LEU CB HB2 sing N N 175 LEU CB HB3 sing N N 176 LEU CG CD1 sing N N 177 LEU CG CD2 sing N N 178 LEU CG HG sing N N 179 LEU CD1 HD11 sing N N 180 LEU CD1 HD12 sing N N 181 LEU CD1 HD13 sing N N 182 LEU CD2 HD21 sing N N 183 LEU CD2 HD22 sing N N 184 LEU CD2 HD23 sing N N 185 LEU OXT HXT sing N N 186 LYS N CA sing N N 187 LYS N H sing N N 188 LYS N H2 sing N N 189 LYS CA C sing N N 190 LYS CA CB sing N N 191 LYS CA HA sing N N 192 LYS C O doub N N 193 LYS C OXT sing N N 194 LYS CB CG sing N N 195 LYS CB HB2 sing N N 196 LYS CB HB3 sing N N 197 LYS CG CD sing N N 198 LYS CG HG2 sing N N 199 LYS CG HG3 sing N N 200 LYS CD CE sing N N 201 LYS CD HD2 sing N N 202 LYS CD HD3 sing N N 203 LYS CE NZ sing N N 204 LYS CE HE2 sing N N 205 LYS CE HE3 sing N N 206 LYS NZ HZ1 sing N N 207 LYS NZ HZ2 sing N N 208 LYS NZ HZ3 sing N N 209 LYS OXT HXT sing N N 210 MET N CA sing N N 211 MET N H sing N N 212 MET N H2 sing N N 213 MET CA C sing N N 214 MET CA CB sing N N 215 MET CA HA sing N N 216 MET C O doub N N 217 MET C OXT sing N N 218 MET CB CG sing N N 219 MET CB HB2 sing N N 220 MET CB HB3 sing N N 221 MET CG SD sing N N 222 MET CG HG2 sing N N 223 MET CG HG3 sing N N 224 MET SD CE sing N N 225 MET CE HE1 sing N N 226 MET CE HE2 sing N N 227 MET CE HE3 sing N N 228 MET OXT HXT sing N N 229 MPD C1 C2 sing N N 230 MPD C1 H11 sing N N 231 MPD C1 H12 sing N N 232 MPD C1 H13 sing N N 233 MPD C2 O2 sing N N 234 MPD C2 CM sing N N 235 MPD C2 C3 sing N N 236 MPD O2 HO2 sing N N 237 MPD CM HM1 sing N N 238 MPD CM HM2 sing N N 239 MPD CM HM3 sing N N 240 MPD C3 C4 sing N N 241 MPD C3 H31 sing N N 242 MPD C3 H32 sing N N 243 MPD C4 O4 sing N N 244 MPD C4 C5 sing N N 245 MPD C4 H4 sing N N 246 MPD O4 HO4 sing N N 247 MPD C5 H51 sing N N 248 MPD C5 H52 sing N N 249 MPD C5 H53 sing N N 250 NH2 N HN1 sing N N 251 NH2 N HN2 sing N N 252 SER N CA sing N N 253 SER N H sing N N 254 SER N H2 sing N N 255 SER CA C sing N N 256 SER CA CB sing N N 257 SER CA HA sing N N 258 SER C O doub N N 259 SER C OXT sing N N 260 SER CB OG sing N N 261 SER CB HB2 sing N N 262 SER CB HB3 sing N N 263 SER OG HG sing N N 264 SER OXT HXT sing N N 265 THR N CA sing N N 266 THR N H sing N N 267 THR N H2 sing N N 268 THR CA C sing N N 269 THR CA CB sing N N 270 THR CA HA sing N N 271 THR C O doub N N 272 THR C OXT sing N N 273 THR CB OG1 sing N N 274 THR CB CG2 sing N N 275 THR CB HB sing N N 276 THR OG1 HG1 sing N N 277 THR CG2 HG21 sing N N 278 THR CG2 HG22 sing N N 279 THR CG2 HG23 sing N N 280 THR OXT HXT sing N N 281 TRP N CA sing N N 282 TRP N H sing N N 283 TRP N H2 sing N N 284 TRP CA C sing N N 285 TRP CA CB sing N N 286 TRP CA HA sing N N 287 TRP C O doub N N 288 TRP C OXT sing N N 289 TRP CB CG sing N N 290 TRP CB HB2 sing N N 291 TRP CB HB3 sing N N 292 TRP CG CD1 doub Y N 293 TRP CG CD2 sing Y N 294 TRP CD1 NE1 sing Y N 295 TRP CD1 HD1 sing N N 296 TRP CD2 CE2 doub Y N 297 TRP CD2 CE3 sing Y N 298 TRP NE1 CE2 sing Y N 299 TRP NE1 HE1 sing N N 300 TRP CE2 CZ2 sing Y N 301 TRP CE3 CZ3 doub Y N 302 TRP CE3 HE3 sing N N 303 TRP CZ2 CH2 doub Y N 304 TRP CZ2 HZ2 sing N N 305 TRP CZ3 CH2 sing Y N 306 TRP CZ3 HZ3 sing N N 307 TRP CH2 HH2 sing N N 308 TRP OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1AIK _pdbx_initial_refinement_model.details 'PDB ENTRY 1AIK' # _atom_sites.entry_id 3AHA _atom_sites.fract_transf_matrix[1][1] 0.011283 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000173 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019810 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017810 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_