HEADER ELECTRON TRANSPORT 26-APR-10 3AHP TITLE CRYSTAL STRUCTURE OF STABLE PROTEIN, CUTA1, FROM A PSYCHROTROPHIC TITLE 2 BACTERIUM SHEWANELLA SP. SIB1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CUTA1; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHEWANELLA; SOURCE 3 ORGANISM_TAXID: 117911; SOURCE 4 STRAIN: SIB1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-25B(+) KEYWDS CUTA1, THERMOSTABLE PROTEIN, ELECTRON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.TANAKA,C.ANGKAWIDJAJA,Y.KOGA,K.TAKANO,S.KANAYA REVDAT 2 01-NOV-23 3AHP 1 REMARK REVDAT 1 05-JAN-11 3AHP 0 JRNL AUTH A.SATO,S.YOKOTANI,T.TADOKORO,S.I.TANAKA,C.ANGKAWIDJAJA, JRNL AUTH 2 Y.KOGA,K.TAKANO,S.KANAYA JRNL TITL CRYSTAL STRUCTURE OF STABLE PROTEIN CUTA1 FROM JRNL TITL 2 PSYCHROTROPHIC BACTERIUM SHEWANELLA SP. SIB1 JRNL REF J.SYNCHROTRON RADIAT. V. 18 6 2011 JRNL REFN ISSN 0909-0495 JRNL PMID 21169681 JRNL DOI 10.1107/S0909049510028669 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 31314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1673 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2236 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 131 REMARK 3 BIN FREE R VALUE : 0.3410 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5004 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 63 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.381 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.288 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.199 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.355 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.901 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5128 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7020 ; 1.312 ; 1.960 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 634 ;13.312 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;46.635 ;26.168 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 826 ;23.413 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;26.669 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 808 ; 0.140 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3876 ; 0.014 ; 0.022 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3224 ; 1.286 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5288 ; 2.446 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1904 ; 3.727 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1732 ; 5.748 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AHP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-APR-10. REMARK 100 THE DEPOSITION ID IS D_1000029267. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : RH MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33076 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.60 REMARK 200 R MERGE (I) : 0.17500 REMARK 200 R SYM (I) : 0.14300 REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.90 REMARK 200 R MERGE FOR SHELL (I) : 0.77200 REMARK 200 R SYM FOR SHELL (I) : 0.68900 REMARK 200 FOR SHELL : 3.030 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1NAQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0M NA/K-PHOSPHATE, 100MM ACETATE, PH REMARK 280 4.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.20500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 67.33550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 67.33550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.10250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 67.33550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 67.33550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 96.30750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 67.33550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 67.33550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.10250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 67.33550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 67.33550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 96.30750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 64.20500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 2 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 465 TYR D 2 REMARK 465 MET E 1 REMARK 465 MET F 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU F 31 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE B 86 99.74 -162.87 REMARK 500 PHE B 95 109.64 -58.57 REMARK 500 ASP C 15 144.01 178.56 REMARK 500 PHE C 86 105.22 -162.13 REMARK 500 TRP D 47 -86.48 -116.99 REMARK 500 ASP D 48 9.96 -66.92 REMARK 500 SER D 106 134.58 -32.83 REMARK 500 TRP E 47 -76.35 -117.81 REMARK 500 ASP E 48 62.80 -109.89 REMARK 500 ASN E 49 28.13 41.16 REMARK 500 ASP F 15 128.94 -172.24 REMARK 500 TRP F 47 97.96 -166.29 REMARK 500 GLN F 53 83.90 -168.29 REMARK 500 VAL F 83 72.35 40.07 REMARK 500 GLU F 85 107.25 -48.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 104 ASN A 105 -145.93 REMARK 500 PRO C 14 ASP C 15 -136.62 REMARK 500 TRP C 47 ASP C 48 -43.28 REMARK 500 ASP D 48 ASN D 49 -149.99 REMARK 500 ASN D 105 SER D 106 145.71 REMARK 500 TYR F 2 LYS F 3 -67.82 REMARK 500 PRO F 14 ASP F 15 -137.65 REMARK 500 CYS F 52 GLN F 53 -141.46 REMARK 500 GLN F 73 LEU F 74 -132.04 REMARK 500 GLU F 82 VAL F 83 -140.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY REMARK 999 EXIST. THIS SEQUENCE WILL BE DEPOSITED IN THE SEQUENCE DATABASE. DBREF 3AHP A 1 108 PDB 3AHP 3AHP 1 108 DBREF 3AHP B 1 108 PDB 3AHP 3AHP 1 108 DBREF 3AHP C 1 108 PDB 3AHP 3AHP 1 108 DBREF 3AHP D 1 108 PDB 3AHP 3AHP 1 108 DBREF 3AHP E 1 108 PDB 3AHP 3AHP 1 108 DBREF 3AHP F 1 108 PDB 3AHP 3AHP 1 108 SEQRES 1 A 108 MET TYR LYS PRO GLU GLN LEU LEU ILE PHE THR THR CYS SEQRES 2 A 108 PRO ASP ALA ASP ILE ALA CYS ARG ILE ALA THR ALA LEU SEQRES 3 A 108 VAL GLU ALA LYS LEU ALA ALA CYS VAL GLN ILE GLY GLN SEQRES 4 A 108 ALA VAL GLU SER ILE TYR GLN TRP ASP ASN ASN ILE CYS SEQRES 5 A 108 GLN SER HIS GLU VAL PRO MET GLN ILE LYS CYS MET THR SEQRES 6 A 108 THR ASP TYR PRO ALA ILE GLU GLN LEU VAL ILE THR MET SEQRES 7 A 108 HIS PRO TYR GLU VAL PRO GLU PHE ILE ALA THR PRO ILE SEQRES 8 A 108 ILE GLY GLY PHE GLY PRO TYR LEU GLN TRP ILE LYS ASP SEQRES 9 A 108 ASN SER PRO SER SEQRES 1 B 108 MET TYR LYS PRO GLU GLN LEU LEU ILE PHE THR THR CYS SEQRES 2 B 108 PRO ASP ALA ASP ILE ALA CYS ARG ILE ALA THR ALA LEU SEQRES 3 B 108 VAL GLU ALA LYS LEU ALA ALA CYS VAL GLN ILE GLY GLN SEQRES 4 B 108 ALA VAL GLU SER ILE TYR GLN TRP ASP ASN ASN ILE CYS SEQRES 5 B 108 GLN SER HIS GLU VAL PRO MET GLN ILE LYS CYS MET THR SEQRES 6 B 108 THR ASP TYR PRO ALA ILE GLU GLN LEU VAL ILE THR MET SEQRES 7 B 108 HIS PRO TYR GLU VAL PRO GLU PHE ILE ALA THR PRO ILE SEQRES 8 B 108 ILE GLY GLY PHE GLY PRO TYR LEU GLN TRP ILE LYS ASP SEQRES 9 B 108 ASN SER PRO SER SEQRES 1 C 108 MET TYR LYS PRO GLU GLN LEU LEU ILE PHE THR THR CYS SEQRES 2 C 108 PRO ASP ALA ASP ILE ALA CYS ARG ILE ALA THR ALA LEU SEQRES 3 C 108 VAL GLU ALA LYS LEU ALA ALA CYS VAL GLN ILE GLY GLN SEQRES 4 C 108 ALA VAL GLU SER ILE TYR GLN TRP ASP ASN ASN ILE CYS SEQRES 5 C 108 GLN SER HIS GLU VAL PRO MET GLN ILE LYS CYS MET THR SEQRES 6 C 108 THR ASP TYR PRO ALA ILE GLU GLN LEU VAL ILE THR MET SEQRES 7 C 108 HIS PRO TYR GLU VAL PRO GLU PHE ILE ALA THR PRO ILE SEQRES 8 C 108 ILE GLY GLY PHE GLY PRO TYR LEU GLN TRP ILE LYS ASP SEQRES 9 C 108 ASN SER PRO SER SEQRES 1 D 108 MET TYR LYS PRO GLU GLN LEU LEU ILE PHE THR THR CYS SEQRES 2 D 108 PRO ASP ALA ASP ILE ALA CYS ARG ILE ALA THR ALA LEU SEQRES 3 D 108 VAL GLU ALA LYS LEU ALA ALA CYS VAL GLN ILE GLY GLN SEQRES 4 D 108 ALA VAL GLU SER ILE TYR GLN TRP ASP ASN ASN ILE CYS SEQRES 5 D 108 GLN SER HIS GLU VAL PRO MET GLN ILE LYS CYS MET THR SEQRES 6 D 108 THR ASP TYR PRO ALA ILE GLU GLN LEU VAL ILE THR MET SEQRES 7 D 108 HIS PRO TYR GLU VAL PRO GLU PHE ILE ALA THR PRO ILE SEQRES 8 D 108 ILE GLY GLY PHE GLY PRO TYR LEU GLN TRP ILE LYS ASP SEQRES 9 D 108 ASN SER PRO SER SEQRES 1 E 108 MET TYR LYS PRO GLU GLN LEU LEU ILE PHE THR THR CYS SEQRES 2 E 108 PRO ASP ALA ASP ILE ALA CYS ARG ILE ALA THR ALA LEU SEQRES 3 E 108 VAL GLU ALA LYS LEU ALA ALA CYS VAL GLN ILE GLY GLN SEQRES 4 E 108 ALA VAL GLU SER ILE TYR GLN TRP ASP ASN ASN ILE CYS SEQRES 5 E 108 GLN SER HIS GLU VAL PRO MET GLN ILE LYS CYS MET THR SEQRES 6 E 108 THR ASP TYR PRO ALA ILE GLU GLN LEU VAL ILE THR MET SEQRES 7 E 108 HIS PRO TYR GLU VAL PRO GLU PHE ILE ALA THR PRO ILE SEQRES 8 E 108 ILE GLY GLY PHE GLY PRO TYR LEU GLN TRP ILE LYS ASP SEQRES 9 E 108 ASN SER PRO SER SEQRES 1 F 108 MET TYR LYS PRO GLU GLN LEU LEU ILE PHE THR THR CYS SEQRES 2 F 108 PRO ASP ALA ASP ILE ALA CYS ARG ILE ALA THR ALA LEU SEQRES 3 F 108 VAL GLU ALA LYS LEU ALA ALA CYS VAL GLN ILE GLY GLN SEQRES 4 F 108 ALA VAL GLU SER ILE TYR GLN TRP ASP ASN ASN ILE CYS SEQRES 5 F 108 GLN SER HIS GLU VAL PRO MET GLN ILE LYS CYS MET THR SEQRES 6 F 108 THR ASP TYR PRO ALA ILE GLU GLN LEU VAL ILE THR MET SEQRES 7 F 108 HIS PRO TYR GLU VAL PRO GLU PHE ILE ALA THR PRO ILE SEQRES 8 F 108 ILE GLY GLY PHE GLY PRO TYR LEU GLN TRP ILE LYS ASP SEQRES 9 F 108 ASN SER PRO SER FORMUL 7 HOH *63(H2 O) HELIX 1 1 ASP A 15 ALA A 29 1 15 HELIX 2 2 ASP A 67 HIS A 79 1 13 HELIX 3 3 PHE A 95 ASP A 104 1 10 HELIX 4 4 ASP B 15 ALA B 29 1 15 HELIX 5 5 ASP B 67 HIS B 79 1 13 HELIX 6 6 PHE B 95 SER B 106 1 12 HELIX 7 7 ASP C 15 ALA C 29 1 15 HELIX 8 8 ASP C 67 HIS C 79 1 13 HELIX 9 9 PHE C 95 SER C 106 1 12 HELIX 10 10 ASP D 15 ALA D 29 1 15 HELIX 11 11 ASP D 67 HIS D 79 1 13 HELIX 12 12 PHE D 95 SER D 106 1 12 HELIX 13 13 ASP E 15 ALA E 29 1 15 HELIX 14 14 ASP E 67 HIS E 79 1 13 HELIX 15 15 PHE E 95 SER E 106 1 12 HELIX 16 16 ASP F 15 ALA F 29 1 15 HELIX 17 17 ASP F 67 HIS F 79 1 13 HELIX 18 18 PHE F 95 SER F 106 1 12 SHEET 1 A13 GLY A 93 GLY A 94 0 SHEET 2 A13 PHE C 86 ILE C 91 -1 O ALA C 88 N GLY A 93 SHEET 3 A13 GLN C 6 CYS C 13 -1 N LEU C 8 O THR C 89 SHEET 4 A13 ASN C 50 MET C 64 -1 O CYS C 63 N LEU C 7 SHEET 5 A13 VAL C 41 TRP C 47 -1 N TYR C 45 O CYS C 52 SHEET 6 A13 CYS A 34 ILE A 37 -1 N VAL A 35 O ILE C 44 SHEET 7 A13 ILE A 51 MET A 64 -1 O GLN A 60 N GLN A 36 SHEET 8 A13 VAL A 41 GLN A 46 -1 N TYR A 45 O CYS A 52 SHEET 9 A13 CYS B 34 GLY B 38 -1 O ILE B 37 N GLU A 42 SHEET 10 A13 ASN B 50 MET B 64 -1 O GLN B 60 N GLN B 36 SHEET 11 A13 GLN B 6 CYS B 13 -1 N CYS B 13 O VAL B 57 SHEET 12 A13 PHE B 86 ILE B 91 -1 O ILE B 87 N PHE B 10 SHEET 13 A13 GLY C 93 GLY C 94 -1 O GLY C 93 N ALA B 88 SHEET 1 B 8 CYS C 34 ILE C 37 0 SHEET 2 B 8 ASN C 50 MET C 64 -1 O GLN C 60 N GLN C 36 SHEET 3 B 8 VAL C 41 TRP C 47 -1 N TYR C 45 O CYS C 52 SHEET 4 B 8 CYS A 34 ILE A 37 -1 N VAL A 35 O ILE C 44 SHEET 5 B 8 ILE A 51 MET A 64 -1 O GLN A 60 N GLN A 36 SHEET 6 B 8 GLN A 6 CYS A 13 -1 N THR A 11 O MET A 59 SHEET 7 B 8 PHE A 86 ILE A 91 -1 O THR A 89 N LEU A 8 SHEET 8 B 8 GLY B 93 GLY B 94 -1 O GLY B 93 N ALA A 88 SHEET 1 C 9 GLY B 93 GLY B 94 0 SHEET 2 C 9 PHE A 86 ILE A 91 -1 N ALA A 88 O GLY B 93 SHEET 3 C 9 GLN A 6 CYS A 13 -1 N LEU A 8 O THR A 89 SHEET 4 C 9 ILE A 51 MET A 64 -1 O MET A 59 N THR A 11 SHEET 5 C 9 VAL A 41 GLN A 46 -1 N TYR A 45 O CYS A 52 SHEET 6 C 9 CYS B 34 GLY B 38 -1 O ILE B 37 N GLU A 42 SHEET 7 C 9 ASN B 50 MET B 64 -1 O GLN B 60 N GLN B 36 SHEET 8 C 9 VAL B 41 TRP B 47 -1 N SER B 43 O SER B 54 SHEET 9 C 9 CYS C 34 ILE C 37 -1 O VAL C 35 N ILE B 44 SHEET 1 D13 GLY D 93 GLY D 94 0 SHEET 2 D13 PHE F 86 ILE F 91 -1 O ALA F 88 N GLY D 93 SHEET 3 D13 GLN F 6 CYS F 13 -1 N LEU F 8 O THR F 89 SHEET 4 D13 ILE F 51 MET F 64 -1 O MET F 59 N THR F 11 SHEET 5 D13 VAL F 41 GLN F 46 -1 N TYR F 45 O CYS F 52 SHEET 6 D13 CYS D 34 ILE D 37 -1 N VAL D 35 O ILE F 44 SHEET 7 D13 ILE D 51 MET D 64 -1 O GLN D 60 N GLN D 36 SHEET 8 D13 VAL D 41 GLN D 46 -1 N SER D 43 O SER D 54 SHEET 9 D13 CYS E 34 ILE E 37 -1 O VAL E 35 N ILE D 44 SHEET 10 D13 ILE E 51 MET E 64 -1 O GLN E 60 N GLN E 36 SHEET 11 D13 GLN E 6 CYS E 13 -1 N LEU E 7 O CYS E 63 SHEET 12 D13 PHE E 86 ILE E 91 -1 O THR E 89 N LEU E 8 SHEET 13 D13 GLY F 93 GLY F 94 -1 O GLY F 93 N ALA E 88 SHEET 1 E 8 CYS F 34 ILE F 37 0 SHEET 2 E 8 ILE F 51 MET F 64 -1 O GLN F 60 N GLN F 36 SHEET 3 E 8 VAL F 41 GLN F 46 -1 N TYR F 45 O CYS F 52 SHEET 4 E 8 CYS D 34 ILE D 37 -1 N VAL D 35 O ILE F 44 SHEET 5 E 8 ILE D 51 MET D 64 -1 O GLN D 60 N GLN D 36 SHEET 6 E 8 GLN D 6 CYS D 13 -1 N CYS D 13 O VAL D 57 SHEET 7 E 8 PHE D 86 ILE D 91 -1 O THR D 89 N LEU D 8 SHEET 8 E 8 GLY E 93 GLY E 94 -1 O GLY E 93 N ALA D 88 SHEET 1 F 9 GLY E 93 GLY E 94 0 SHEET 2 F 9 PHE D 86 ILE D 91 -1 N ALA D 88 O GLY E 93 SHEET 3 F 9 GLN D 6 CYS D 13 -1 N LEU D 8 O THR D 89 SHEET 4 F 9 ILE D 51 MET D 64 -1 O VAL D 57 N CYS D 13 SHEET 5 F 9 VAL D 41 GLN D 46 -1 N SER D 43 O SER D 54 SHEET 6 F 9 CYS E 34 ILE E 37 -1 O VAL E 35 N ILE D 44 SHEET 7 F 9 ILE E 51 MET E 64 -1 O GLN E 60 N GLN E 36 SHEET 8 F 9 VAL E 41 GLN E 46 -1 N TYR E 45 O CYS E 52 SHEET 9 F 9 CYS F 34 ILE F 37 -1 O ILE F 37 N GLU E 42 CISPEP 1 TYR C 2 LYS C 3 0 -17.68 CISPEP 2 TRP F 47 ASP F 48 0 -3.91 CRYST1 134.671 134.671 128.410 90.00 90.00 90.00 P 41 21 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007426 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007426 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007788 0.00000