HEADER SIGNALING PROTEIN 28-JUL-10 3AL8 TITLE PLEXIN A2 / SEMAPHORIN 6A COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEMAPHORIN-6A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEMA AND PSI DOMAIN (UNP RESIDUES 19-570); COMPND 5 SYNONYM: SEMAPHORIN VIA, SEMA VIA, SEMAPHORIN-6A-1, SEMA6A-1, COMPND 6 SEMAPHORIN Q, SEMA Q; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: PLEXIN-A2; COMPND 10 CHAIN: B; COMPND 11 FRAGMENT: SEMA AND PSI DOMAIN (UNP RESIDUES 31-561); COMPND 12 SYNONYM: PLEXIN-2, PLEX 2; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SEMA6A, SEMAQ; SOURCE 6 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 8 EXPRESSION_SYSTEM_CELL: CHO LEC 3.2.8.1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PSGVH0; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: PLXNA2, KIAA0463; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL: HEK293S GNTI-; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PCDNA3.1/HIS-MYC KEYWDS BETA-PROPELLER, SIGNALING COMPLEX, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.NOGI,N.YASUI,E.MIHARA,J.TAKAGI REVDAT 5 06-NOV-24 3AL8 1 HETSYN REVDAT 4 29-JUL-20 3AL8 1 COMPND REMARK SEQADV HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 03-NOV-10 3AL8 1 JRNL REVDAT 2 27-OCT-10 3AL8 1 JRNL REVDAT 1 06-OCT-10 3AL8 0 JRNL AUTH T.NOGI,N.YASUI,E.MIHARA,Y.MATSUNAGA,M.NODA,N.YAMASHITA, JRNL AUTH 2 T.TOYOFUKU,S.UCHIYAMA,Y.GOSHIMA,A.KUMANOGOH,J.TAKAGI JRNL TITL STRUCTURAL BASIS FOR SEMAPHORIN SIGNALLING THROUGH THE JRNL TITL 2 PLEXIN RECEPTOR. JRNL REF NATURE V. 467 1123 2010 JRNL REFN ISSN 0028-0836 JRNL PMID 20881961 JRNL DOI 10.1038/NATURE09473 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.15 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 27830 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1483 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2008 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8148 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 181 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 59.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.62000 REMARK 3 B22 (A**2) : 1.62000 REMARK 3 B33 (A**2) : -2.43000 REMARK 3 B12 (A**2) : 0.81000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.577 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.422 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 28.537 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.908 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.854 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8554 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11626 ; 1.098 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1031 ; 6.012 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 379 ;37.049 ;23.615 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1381 ;18.203 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 52 ;18.948 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1308 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6438 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5158 ; 0.450 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8345 ; 0.827 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3396 ; 0.612 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3281 ; 1.130 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3AL8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-AUG-10. REMARK 100 THE DEPOSITION ID IS D_1000029388. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29317 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.600 REMARK 200 RESOLUTION RANGE LOW (A) : 49.150 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.41700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-25% (WT./VOL.) PEG 1000, 0.2-0.3M REMARK 280 MGCL2, 0.1M NA-CACODYLATE PH 5.5-6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K, PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.91500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.83000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 73.37250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 122.28750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.45750 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.91500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 97.83000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 122.28750 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 73.37250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 24.45750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 195.66000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 15 REMARK 465 SER A 16 REMARK 465 SER A 17 REMARK 465 ARG A 18 REMARK 465 SER A 30 REMARK 465 HIS A 31 REMARK 465 GLY A 32 REMARK 465 ASN A 33 REMARK 465 TYR A 34 REMARK 465 LYS A 45 REMARK 465 PRO A 46 REMARK 465 GLY A 47 REMARK 465 ARG A 48 REMARK 465 ASN A 49 REMARK 465 THR A 50 REMARK 465 THR A 51 REMARK 465 GLN A 52 REMARK 465 HIS A 569 REMARK 465 ASN A 570 REMARK 465 GLY B 31 REMARK 465 THR B 32 REMARK 465 THR B 33 REMARK 465 GLY B 34 REMARK 465 MET B 35 REMARK 465 ASP B 264 REMARK 465 GLY B 265 REMARK 465 MET B 266 REMARK 465 ALA B 267 REMARK 465 ILE B 268 REMARK 465 ASN B 269 REMARK 465 SER B 270 REMARK 465 ALA B 271 REMARK 465 GLY B 272 REMARK 465 GLN B 544 REMARK 465 ARG B 545 REMARK 465 ALA B 546 REMARK 465 TRP B 547 REMARK 465 GLU B 548 REMARK 465 ALA B 549 REMARK 465 ASN B 550 REMARK 465 ARG B 551 REMARK 465 PHE B 552 REMARK 465 ALA B 553 REMARK 465 ALA B 554 REMARK 465 SER B 555 REMARK 465 ILE B 556 REMARK 465 SER B 557 REMARK 465 GLN B 558 REMARK 465 CYS B 559 REMARK 465 MET B 560 REMARK 465 SER B 561 REMARK 465 SER B 562 REMARK 465 ARG B 563 REMARK 465 GLU B 564 REMARK 465 ASN B 565 REMARK 465 LEU B 566 REMARK 465 TYR B 567 REMARK 465 PHE B 568 REMARK 465 GLN B 569 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 35 OG1 CG2 REMARK 470 LYS A 36 CG CD CE NZ REMARK 470 GLN A 37 CG CD OE1 NE2 REMARK 470 ARG A 514 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 517 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 520 CG CD CE NZ REMARK 470 ARG A 550 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 559 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 21 129.08 -35.45 REMARK 500 GLN A 37 41.33 -141.78 REMARK 500 MET A 60 149.47 -173.98 REMARK 500 ASN A 65 -98.37 47.97 REMARK 500 ALA A 72 -153.68 -141.74 REMARK 500 ASP A 74 -1.12 59.46 REMARK 500 THR A 83 108.40 -51.45 REMARK 500 SER A 84 96.90 -30.78 REMARK 500 HIS A 85 106.80 -46.55 REMARK 500 THR A 86 -158.77 -104.25 REMARK 500 SER A 92 -87.36 -62.81 REMARK 500 ASN A 128 -156.36 -156.76 REMARK 500 ALA A 139 66.94 37.49 REMARK 500 ASN A 141 73.02 -150.98 REMARK 500 ALA A 163 16.87 56.42 REMARK 500 THR A 186 -149.83 -173.00 REMARK 500 LEU A 201 168.61 70.97 REMARK 500 ASP A 203 13.85 56.07 REMARK 500 GLN A 224 151.76 176.51 REMARK 500 TYR A 228 104.68 -168.74 REMARK 500 THR A 245 -35.06 -36.32 REMARK 500 SER A 265 -131.25 -82.29 REMARK 500 TRP A 273 137.65 -39.77 REMARK 500 SER A 275 20.44 -141.17 REMARK 500 LYS A 347 -80.84 -46.92 REMARK 500 PRO A 349 -13.40 -48.38 REMARK 500 SER A 374 -26.00 72.02 REMARK 500 VAL A 402 121.56 -35.68 REMARK 500 ASN A 407 28.98 43.98 REMARK 500 THR A 421 -90.57 -126.19 REMARK 500 ALA A 428 65.03 -151.74 REMARK 500 SER A 442 -146.03 -113.85 REMARK 500 ASN A 461 88.83 -154.85 REMARK 500 SER A 478 66.07 -109.64 REMARK 500 ASP A 480 -158.98 -87.93 REMARK 500 ASP A 563 116.75 -37.43 REMARK 500 ASN B 68 -9.10 71.59 REMARK 500 ASN B 76 34.03 -93.46 REMARK 500 GLN B 80 -84.99 -116.47 REMARK 500 SER B 104 49.41 -80.06 REMARK 500 LEU B 117 85.96 -159.21 REMARK 500 TYR B 133 49.60 36.62 REMARK 500 ASP B 144 -0.97 -145.11 REMARK 500 ILE B 147 106.35 -47.80 REMARK 500 SER B 152 177.96 -52.99 REMARK 500 SER B 160 138.10 -174.18 REMARK 500 ARG B 174 64.88 -114.56 REMARK 500 ASP B 189 58.05 32.49 REMARK 500 SER B 209 140.72 -35.68 REMARK 500 MET B 212 116.66 -26.75 REMARK 500 REMARK 500 THIS ENTRY HAS 69 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AL9 RELATED DB: PDB DBREF 3AL8 A 19 570 UNP O35464 SEM6A_MOUSE 19 570 DBREF 3AL8 B 31 561 UNP P70207 PLXA2_MOUSE 31 561 SEQADV 3AL8 GLY A 15 UNP O35464 EXPRESSION TAG SEQADV 3AL8 SER A 16 UNP O35464 EXPRESSION TAG SEQADV 3AL8 SER A 17 UNP O35464 EXPRESSION TAG SEQADV 3AL8 ARG A 18 UNP O35464 EXPRESSION TAG SEQADV 3AL8 SER B 562 UNP P70207 EXPRESSION TAG SEQADV 3AL8 ARG B 563 UNP P70207 EXPRESSION TAG SEQADV 3AL8 GLU B 564 UNP P70207 EXPRESSION TAG SEQADV 3AL8 ASN B 565 UNP P70207 EXPRESSION TAG SEQADV 3AL8 LEU B 566 UNP P70207 EXPRESSION TAG SEQADV 3AL8 TYR B 567 UNP P70207 EXPRESSION TAG SEQADV 3AL8 PHE B 568 UNP P70207 EXPRESSION TAG SEQADV 3AL8 GLN B 569 UNP P70207 EXPRESSION TAG SEQRES 1 A 556 GLY SER SER ARG GLY PHE PRO GLU ASP SER GLU PRO ILE SEQRES 2 A 556 SER ILE SER HIS GLY ASN TYR THR LYS GLN TYR PRO VAL SEQRES 3 A 556 PHE VAL GLY HIS LYS PRO GLY ARG ASN THR THR GLN ARG SEQRES 4 A 556 HIS ARG LEU ASP ILE GLN MET ILE MET ILE MET ASN ARG SEQRES 5 A 556 THR LEU TYR VAL ALA ALA ARG ASP HIS ILE TYR THR VAL SEQRES 6 A 556 ASP ILE ASP THR SER HIS THR GLU GLU ILE TYR CYS SER SEQRES 7 A 556 LYS LYS LEU THR TRP LYS SER ARG GLN ALA ASP VAL ASP SEQRES 8 A 556 THR CYS ARG MET LYS GLY LYS HIS LYS ASP GLU CYS HIS SEQRES 9 A 556 ASN PHE ILE LYS VAL LEU LEU LYS LYS ASN ASP ASP THR SEQRES 10 A 556 LEU PHE VAL CYS GLY THR ASN ALA PHE ASN PRO SER CYS SEQRES 11 A 556 ARG ASN TYR ARG VAL ASP THR LEU GLU THR PHE GLY ASP SEQRES 12 A 556 GLU PHE SER GLY MET ALA ARG CYS PRO TYR ASP ALA LYS SEQRES 13 A 556 HIS ALA ASN ILE ALA LEU PHE ALA ASP GLY LYS LEU TYR SEQRES 14 A 556 SER ALA THR VAL THR ASP PHE LEU ALA ILE ASP ALA VAL SEQRES 15 A 556 ILE TYR ARG SER LEU GLY ASP SER PRO THR LEU ARG THR SEQRES 16 A 556 VAL LYS HIS ASP SER LYS TRP LEU LYS GLU PRO TYR PHE SEQRES 17 A 556 VAL GLN ALA VAL ASP TYR GLY ASP TYR ILE TYR PHE PHE SEQRES 18 A 556 PHE ARG GLU ILE ALA VAL GLU TYR ASN THR MET GLY LYS SEQRES 19 A 556 VAL VAL PHE PRO ARG VAL ALA GLN VAL CYS LYS ASN ASP SEQRES 20 A 556 MET GLY GLY SER GLN ARG VAL LEU GLU LYS GLN TRP THR SEQRES 21 A 556 SER PHE LEU LYS ALA ARG LEU ASN CYS SER VAL PRO GLY SEQRES 22 A 556 ASP SER HIS PHE TYR PHE ASN ILE LEU GLN ALA VAL THR SEQRES 23 A 556 ASP VAL ILE ARG ILE ASN GLY ARG ASP VAL VAL LEU ALA SEQRES 24 A 556 THR PHE SER THR PRO TYR ASN SER ILE PRO GLY SER ALA SEQRES 25 A 556 VAL CYS ALA TYR ASP MET LEU ASP ILE ALA ASN VAL PHE SEQRES 26 A 556 THR GLY ARG PHE LYS GLU GLN LYS SER PRO ASP SER THR SEQRES 27 A 556 TRP THR PRO VAL PRO ASP GLU ARG VAL PRO LYS PRO ARG SEQRES 28 A 556 PRO GLY CYS CYS ALA GLY SER SER SER LEU GLU LYS TYR SEQRES 29 A 556 ALA THR SER ASN GLU PHE PRO ASP ASP THR LEU ASN PHE SEQRES 30 A 556 ILE LYS THR HIS PRO LEU MET ASP GLU ALA VAL PRO SER SEQRES 31 A 556 ILE ILE ASN ARG PRO TRP PHE LEU ARG THR MET VAL ARG SEQRES 32 A 556 TYR ARG LEU THR LYS ILE ALA VAL ASP ASN ALA ALA GLY SEQRES 33 A 556 PRO TYR GLN ASN HIS THR VAL VAL PHE LEU GLY SER GLU SEQRES 34 A 556 LYS GLY ILE ILE LEU LYS PHE LEU ALA ARG ILE GLY SER SEQRES 35 A 556 SER GLY PHE LEU ASN GLY SER LEU PHE LEU GLU GLU MET SEQRES 36 A 556 ASN VAL TYR ASN PRO GLU LYS CYS SER TYR ASP GLY VAL SEQRES 37 A 556 GLU ASP LYS ARG ILE MET GLY MET GLN LEU ASP ARG ALA SEQRES 38 A 556 SER GLY SER LEU TYR VAL ALA PHE SER THR CYS VAL ILE SEQRES 39 A 556 LYS VAL PRO LEU GLY ARG CYS GLU ARG HIS GLY LYS CYS SEQRES 40 A 556 LYS LYS THR CYS ILE ALA SER ARG ASP PRO TYR CYS GLY SEQRES 41 A 556 TRP VAL ARG GLU SER GLY SER CYS ALA HIS LEU SER PRO SEQRES 42 A 556 LEU SER ARG LEU THR PHE GLU GLN ASP ILE GLU ARG GLY SEQRES 43 A 556 ASN THR ASP GLY LEU GLY ASP CYS HIS ASN SEQRES 1 B 539 GLY THR THR GLY MET PRO GLN TYR SER THR PHE HIS SER SEQRES 2 B 539 GLU ASN ARG ASP TRP THR PHE ASN HIS LEU THR VAL HIS SEQRES 3 B 539 ARG ARG THR GLY ALA VAL TYR VAL GLY ALA ILE ASN ARG SEQRES 4 B 539 VAL TYR LYS LEU THR GLY ASN LEU THR ILE GLN VAL ALA SEQRES 5 B 539 HIS LYS THR GLY PRO GLU GLU ASP ASN LYS ALA CYS TYR SEQRES 6 B 539 PRO PRO LEU ILE VAL GLN PRO CYS SER GLU VAL LEU THR SEQRES 7 B 539 LEU THR ASN ASN VAL ASN LYS LEU LEU ILE ILE ASP TYR SEQRES 8 B 539 SER GLU ASN ARG LEU LEU ALA CYS GLY SER LEU TYR GLN SEQRES 9 B 539 GLY VAL CYS LYS LEU LEU ARG LEU ASP ASP LEU PHE ILE SEQRES 10 B 539 LEU VAL GLU PRO SER HIS LYS LYS GLU HIS TYR LEU SER SEQRES 11 B 539 SER VAL ASN LYS THR GLY THR MET TYR GLY VAL ILE VAL SEQRES 12 B 539 ARG SER GLU GLY GLU ASP GLY LYS LEU PHE ILE GLY THR SEQRES 13 B 539 ALA VAL ASP GLY LYS GLN ASP TYR PHE PRO THR LEU SER SEQRES 14 B 539 SER ARG LYS LEU PRO ARG ASP PRO GLU SER SER ALA MET SEQRES 15 B 539 LEU ASP TYR GLU LEU HIS SER ASP PHE VAL SER SER LEU SEQRES 16 B 539 ILE LYS ILE PRO SER ASP THR LEU ALA LEU VAL SER HIS SEQRES 17 B 539 PHE ASP ILE PHE TYR ILE TYR GLY PHE ALA SER GLY GLY SEQRES 18 B 539 PHE VAL TYR PHE LEU THR VAL GLN PRO GLU THR PRO ASP SEQRES 19 B 539 GLY MET ALA ILE ASN SER ALA GLY ASP LEU PHE TYR THR SEQRES 20 B 539 SER ARG ILE VAL ARG LEU CYS LYS ASP ASP PRO LYS PHE SEQRES 21 B 539 HIS SER TYR VAL SER LEU PRO PHE GLY CYS THR ARG ALA SEQRES 22 B 539 GLY VAL GLU TYR ARG LEU LEU GLN ALA ALA TYR LEU ALA SEQRES 23 B 539 LYS PRO GLY GLU ALA LEU ALA GLN ALA PHE ASN ILE SER SEQRES 24 B 539 SER ASP GLU ASP VAL LEU PHE ALA ILE PHE SER LYS GLY SEQRES 25 B 539 GLN LYS GLN TYR HIS HIS PRO PRO ASP ASP SER ALA LEU SEQRES 26 B 539 CYS ALA PHE PRO ILE ARG ALA ILE ASN LEU GLN ILE LYS SEQRES 27 B 539 GLU ARG LEU GLN SER CYS TYR HIS GLY GLU GLY ASN LEU SEQRES 28 B 539 GLU LEU ASN TRP LEU LEU GLY LYS ASP VAL GLN CYS THR SEQRES 29 B 539 LYS ALA PRO VAL PRO ILE ASP ASP ASN PHE CYS GLY LEU SEQRES 30 B 539 ASP ILE ASN GLN PRO LEU GLY GLY SER THR PRO VAL GLU SEQRES 31 B 539 GLY LEU THR LEU TYR THR THR SER ARG ASP ARG LEU THR SEQRES 32 B 539 SER VAL ALA SER TYR VAL TYR ASN GLY TYR SER VAL VAL SEQRES 33 B 539 PHE VAL GLY THR LYS SER GLY LYS LEU LYS LYS ILE ARG SEQRES 34 B 539 ALA ASP GLY PRO PRO HIS GLY GLY VAL GLN TYR GLU MET SEQRES 35 B 539 VAL SER VAL PHE LYS ASP GLY SER PRO ILE LEU ARG ASP SEQRES 36 B 539 MET ALA PHE SER ILE ASN GLN LEU TYR LEU TYR VAL MET SEQRES 37 B 539 SER GLU ARG GLN VAL THR ARG VAL PRO VAL GLU SER CYS SEQRES 38 B 539 GLU GLN TYR THR THR CYS GLY GLU CYS LEU SER SER GLY SEQRES 39 B 539 ASP PRO HIS CYS GLY TRP CYS ALA LEU HIS ASN MET CYS SEQRES 40 B 539 SER ARG ARG ASP LYS CYS GLN ARG ALA TRP GLU ALA ASN SEQRES 41 B 539 ARG PHE ALA ALA SER ILE SER GLN CYS MET SER SER ARG SEQRES 42 B 539 GLU ASN LEU TYR PHE GLN MODRES 3AL8 ASN B 163 ASN GLYCOSYLATION SITE MODRES 3AL8 ASN B 327 ASN GLYCOSYLATION SITE MODRES 3AL8 ASN B 76 ASN GLYCOSYLATION SITE MODRES 3AL8 ASN A 461 ASN GLYCOSYLATION SITE MODRES 3AL8 ASN A 434 ASN GLYCOSYLATION SITE MODRES 3AL8 ASN A 282 ASN GLYCOSYLATION SITE HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET MAN E 5 11 HET MAN E 6 11 HET MAN E 7 11 HET NAG A9401 14 HET NAG A9501 14 HET NAG B9101 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 9(C8 H15 N O6) FORMUL 5 BMA C6 H12 O6 FORMUL 5 MAN 4(C6 H12 O6) HELIX 1 1 ARG A 100 LYS A 110 1 11 HELIX 2 2 MET A 332 PHE A 339 1 8 HELIX 3 3 SER A 374 TYR A 378 5 5 HELIX 4 4 THR A 380 PHE A 384 5 5 HELIX 5 5 PRO A 385 HIS A 395 1 11 HELIX 6 6 SER A 404 ARG A 408 5 5 HELIX 7 7 ASN A 473 SER A 478 1 6 HELIX 8 8 ARG A 514 HIS A 518 5 5 HELIX 9 9 CYS A 521 SER A 528 1 8 HELIX 10 10 LEU B 132 GLY B 135 5 4 HELIX 11 11 LYS B 154 TYR B 158 5 5 HELIX 12 12 PRO B 229 VAL B 236 1 8 HELIX 13 13 GLY B 319 ASN B 327 1 9 HELIX 14 14 ILE B 360 TYR B 375 1 16 HELIX 15 15 LEU B 383 GLY B 388 1 6 HELIX 16 16 SER B 510 TYR B 514 5 5 HELIX 17 17 THR B 516 GLY B 524 1 9 SHEET 1 A 5 GLU A 88 ILE A 89 0 SHEET 2 A 5 VAL A 40 PHE A 41 1 N VAL A 40 O ILE A 89 SHEET 3 A 5 VAL A 507 PRO A 511 -1 O VAL A 507 N PHE A 41 SHEET 4 A 5 SER A 498 PHE A 503 -1 N LEU A 499 O VAL A 510 SHEET 5 A 5 ILE A 487 ASP A 493 -1 N GLN A 491 O TYR A 500 SHEET 1 B 3 MET A 60 MET A 64 0 SHEET 2 B 3 THR A 67 ALA A 71 -1 O THR A 67 N MET A 64 SHEET 3 B 3 ILE A 76 ASP A 80 -1 O TYR A 77 N VAL A 70 SHEET 1 C 4 ILE A 121 LYS A 126 0 SHEET 2 C 4 THR A 131 GLY A 136 -1 O PHE A 133 N LEU A 125 SHEET 3 C 4 SER A 143 ARG A 148 -1 O ARG A 145 N VAL A 134 SHEET 4 C 4 THR A 154 SER A 160 -1 O PHE A 159 N CYS A 144 SHEET 1 D 3 ILE A 174 ALA A 178 0 SHEET 2 D 3 LYS A 181 VAL A 187 -1 O TYR A 183 N LEU A 176 SHEET 3 D 3 ALA A 195 SER A 200 -1 O TYR A 198 N SER A 184 SHEET 1 E 5 TYR A 221 TYR A 228 0 SHEET 2 E 5 TYR A 231 ILE A 239 -1 O PHE A 235 N GLN A 224 SHEET 3 E 5 VAL A 250 CYS A 258 -1 O ARG A 253 N PHE A 236 SHEET 4 E 5 LEU A 277 LEU A 281 -1 O LEU A 277 N GLN A 256 SHEET 5 E 5 LEU A 397 VAL A 402 1 O MET A 398 N LYS A 278 SHEET 1 F 2 SER A 284 VAL A 285 0 SHEET 2 F 2 PHE A 291 TYR A 292 -1 O PHE A 291 N VAL A 285 SHEET 1 G 3 ALA A 298 VAL A 299 0 SHEET 2 G 3 ARG A 308 SER A 316 -1 O THR A 314 N ALA A 298 SHEET 3 G 3 ILE A 303 ILE A 305 -1 N ILE A 303 O VAL A 310 SHEET 1 H 4 ALA A 298 VAL A 299 0 SHEET 2 H 4 ARG A 308 SER A 316 -1 O THR A 314 N ALA A 298 SHEET 3 H 4 SER A 325 ASP A 331 -1 O CYS A 328 N ALA A 313 SHEET 4 H 4 PHE A 411 ARG A 413 -1 O ARG A 413 N SER A 325 SHEET 1 I 2 LYS A 344 GLU A 345 0 SHEET 2 I 2 THR A 354 PRO A 355 -1 O THR A 354 N GLU A 345 SHEET 1 J 4 ILE A 423 ALA A 429 0 SHEET 2 J 4 HIS A 435 GLY A 441 -1 O PHE A 439 N ALA A 424 SHEET 3 J 4 ILE A 446 ILE A 454 -1 O LEU A 448 N LEU A 440 SHEET 4 J 4 LEU A 460 ASN A 470 -1 O MET A 469 N ILE A 447 SHEET 1 K 3 SER A 541 HIS A 544 0 SHEET 2 K 3 CYS A 533 VAL A 536 -1 N GLY A 534 O ALA A 543 SHEET 3 K 3 PHE A 553 GLU A 554 -1 O GLU A 554 N TRP A 535 SHEET 1 L 4 SER B 39 HIS B 42 0 SHEET 2 L 4 GLN B 502 PRO B 507 -1 O ARG B 505 N SER B 39 SHEET 3 L 4 TYR B 494 SER B 499 -1 N VAL B 497 O THR B 504 SHEET 4 L 4 MET B 486 PHE B 488 -1 N ALA B 487 O TYR B 496 SHEET 1 M 4 THR B 54 VAL B 55 0 SHEET 2 M 4 VAL B 62 ALA B 66 -1 O TYR B 63 N THR B 54 SHEET 3 M 4 ARG B 69 LEU B 73 -1 O TYR B 71 N VAL B 64 SHEET 4 M 4 ILE B 79 VAL B 81 -1 O VAL B 81 N LYS B 72 SHEET 1 N 2 GLU B 88 ASP B 90 0 SHEET 2 N 2 THR B 108 THR B 110 -1 O THR B 108 N ASP B 90 SHEET 1 O 3 ASN B 114 ASP B 120 0 SHEET 2 O 3 ARG B 125 GLY B 130 -1 O ARG B 125 N ASP B 120 SHEET 3 O 3 CYS B 137 ARG B 141 -1 O LYS B 138 N ALA B 128 SHEET 1 P 4 MET B 168 VAL B 173 0 SHEET 2 P 4 LYS B 181 THR B 186 -1 O PHE B 183 N VAL B 171 SHEET 3 P 4 LEU B 198 LYS B 202 -1 O ARG B 201 N LEU B 182 SHEET 4 P 4 LEU B 225 ILE B 226 -1 O ILE B 226 N LEU B 198 SHEET 1 Q 5 PHE B 242 SER B 249 0 SHEET 2 Q 5 PHE B 252 PRO B 260 -1 O LEU B 256 N TYR B 245 SHEET 3 Q 5 TYR B 276 CYS B 284 -1 O LEU B 283 N VAL B 253 SHEET 4 Q 5 VAL B 294 ARG B 302 -1 O LEU B 296 N ILE B 280 SHEET 5 Q 5 VAL B 419 GLU B 420 1 O VAL B 419 N PRO B 297 SHEET 1 R 8 PHE B 242 SER B 249 0 SHEET 2 R 8 PHE B 252 PRO B 260 -1 O LEU B 256 N TYR B 245 SHEET 3 R 8 TYR B 276 CYS B 284 -1 O LEU B 283 N VAL B 253 SHEET 4 R 8 VAL B 294 ARG B 302 -1 O LEU B 296 N ILE B 280 SHEET 5 R 8 VAL B 305 ALA B 316 -1 O TYR B 307 N CYS B 300 SHEET 6 R 8 VAL B 334 LYS B 341 -1 O VAL B 334 N ALA B 316 SHEET 7 R 8 SER B 353 PRO B 359 -1 O PHE B 358 N LEU B 335 SHEET 8 R 8 LEU B 422 THR B 427 -1 O LEU B 424 N LEU B 355 SHEET 1 S 4 LEU B 432 TYR B 440 0 SHEET 2 S 4 TYR B 443 THR B 450 -1 O PHE B 447 N ALA B 436 SHEET 3 S 4 LYS B 454 GLY B 462 -1 O ILE B 458 N VAL B 446 SHEET 4 S 4 GLY B 466 SER B 474 -1 O VAL B 473 N LEU B 455 SHEET 1 T 2 CYS B 528 TRP B 530 0 SHEET 2 T 2 CYS B 537 ARG B 539 -1 O SER B 538 N GLY B 529 SSBOND 1 CYS A 107 CYS A 117 1555 1555 2.03 SSBOND 2 CYS A 135 CYS A 144 1555 1555 2.04 SSBOND 3 CYS A 258 CYS A 369 1555 1555 2.05 SSBOND 4 CYS A 283 CYS A 328 1555 1555 2.04 SSBOND 5 CYS A 477 CYS A 506 1555 1555 2.03 SSBOND 6 CYS A 515 CYS A 533 1555 1555 2.04 SSBOND 7 CYS A 521 CYS A 568 1555 1555 2.05 SSBOND 8 CYS A 525 CYS A 542 1555 1555 2.04 SSBOND 9 CYS B 94 CYS B 103 1555 1555 2.05 SSBOND 10 CYS B 129 CYS B 137 1555 1555 2.03 SSBOND 11 CYS B 284 CYS B 405 1555 1555 2.03 SSBOND 12 CYS B 300 CYS B 356 1555 1555 2.05 SSBOND 13 CYS B 374 CYS B 393 1555 1555 2.04 SSBOND 14 CYS B 511 CYS B 528 1555 1555 2.04 SSBOND 15 CYS B 520 CYS B 537 1555 1555 2.04 SSBOND 16 CYS B 531 CYS B 543 1555 1555 2.04 LINK ND2 ASN A 282 C1 NAG A9401 1555 1555 1.45 LINK ND2 ASN A 434 C1 NAG A9501 1555 1555 1.45 LINK ND2 ASN A 461 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN B 76 C1 NAG B9101 1555 1555 1.44 LINK ND2 ASN B 163 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN B 327 C1 NAG E 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O6 BMA E 3 C1 MAN E 4 1555 1555 1.43 LINK O3 BMA E 3 C1 MAN E 7 1555 1555 1.45 LINK O3 MAN E 4 C1 MAN E 5 1555 1555 1.44 LINK O6 MAN E 4 C1 MAN E 6 1555 1555 1.44 CISPEP 1 LYS A 363 PRO A 364 0 -0.62 CISPEP 2 GLY B 86 PRO B 87 0 -4.00 CISPEP 3 TYR B 95 PRO B 96 0 -3.26 CISPEP 4 GLN B 411 PRO B 412 0 -5.79 CISPEP 5 PRO B 463 PRO B 464 0 -0.10 CRYST1 240.870 240.870 146.745 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004152 0.002397 0.000000 0.00000 SCALE2 0.000000 0.004794 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006815 0.00000