HEADER TRANSPORT PROTEIN 29-OCT-10 3AQE TITLE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN RAMP2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR ACTIVITY-MODIFYING PROTEIN 2; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN, UNP RESIDUES 56-139; COMPND 5 SYNONYM: CALCITONIN-RECEPTOR-LIKE RECEPTOR ACTIVITY-MODIFYING PROTEIN COMPND 6 2, CRLR ACTIVITY-MODIFYING PROTEIN 2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAMP2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI CELL-FREE SYSTEM; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PX070809-03 KEYWDS TRANSMEMBRANE, GPCR, ADRENOMEDULLIN, TRAFFICKING, CLR, CGRP, KEYWDS 2 ENDOPLASMIC RETICULUM, DISEASE, NEOVASCULARIZATION, HELIX BUNDLE, KEYWDS 3 CALCITONIN RECEPTOR-LIKE RECEPTOR (CRLR), ENDOPLASMIC RETICULUM KEYWDS 4 (ER), CELL MEMBRANE, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.KUSANO,M.KUKIMOTO-NIINO,M.SHIROUZU,T.SHINDO,S.YOKOYAMA REVDAT 3 09-OCT-24 3AQE 1 SEQADV LINK REVDAT 2 25-JUL-12 3AQE 1 JRNL REVDAT 1 09-NOV-11 3AQE 0 JRNL AUTH S.KUSANO,M.KUKIMOTO-NIINO,N.HINO,N.OHSAWA,K.OKUDA, JRNL AUTH 2 K.SAKAMOTO,M.SHIROUZU,T.SHINDO,S.YOKOYAMA JRNL TITL STRUCTURAL BASIS FOR EXTRACELLULAR INTERACTIONS BETWEEN JRNL TITL 2 CALCITONIN RECEPTOR-LIKE RECEPTOR AND RECEPTOR JRNL TITL 3 ACTIVITY-MODIFYING PROTEIN 2 FOR ADRENOMEDULLIN-SPECIFIC JRNL TITL 4 BINDING JRNL REF PROTEIN SCI. V. 21 199 2012 JRNL REFN ISSN 0961-8368 JRNL PMID 22102369 JRNL DOI 10.1002/PRO.2003 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.2_869 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 33465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.233 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 1696 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4142 - 4.5685 0.98 2796 175 0.2240 0.2454 REMARK 3 2 4.5685 - 3.6272 0.99 2759 134 0.1861 0.2335 REMARK 3 3 3.6272 - 3.1690 0.99 2699 149 0.2102 0.2394 REMARK 3 4 3.1690 - 2.8794 1.00 2706 136 0.2345 0.2832 REMARK 3 5 2.8794 - 2.6731 1.00 2712 138 0.2335 0.2698 REMARK 3 6 2.6731 - 2.5155 1.00 2685 150 0.2342 0.3010 REMARK 3 7 2.5155 - 2.3896 1.00 2658 133 0.2303 0.2973 REMARK 3 8 2.3896 - 2.2856 0.96 2574 138 0.2552 0.3434 REMARK 3 9 2.2856 - 2.1976 0.86 2284 141 0.3522 0.3987 REMARK 3 10 2.1976 - 2.1218 0.98 2632 143 0.2658 0.3253 REMARK 3 11 2.1218 - 2.0554 1.00 2676 126 0.2530 0.3176 REMARK 3 12 2.0554 - 1.9967 0.98 2588 133 0.2344 0.2623 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.38 REMARK 3 B_SOL : 35.94 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.91880 REMARK 3 B22 (A**2) : 10.52640 REMARK 3 B33 (A**2) : -2.60760 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3959 REMARK 3 ANGLE : 0.942 5375 REMARK 3 CHIRALITY : 0.071 537 REMARK 3 PLANARITY : 0.004 705 REMARK 3 DIHEDRAL : 15.924 1397 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3AQE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-NOV-10. REMARK 100 THE DEPOSITION ID IS D_1000029565. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9788, 0.9792, 0.9640 REMARK 200 MONOCHROMATOR : SI DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU JUPITER 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33866 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.620 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08400 REMARK 200 FOR THE DATA SET : 19.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.24000 REMARK 200 FOR SHELL : 7.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM-HEPES, 25% (V/V) PEG 400, REMARK 280 0.2M CALCIUM CHLORIDE DI-HYDRATE, 0.15% AGAROSE , PH 7.2, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.78550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.99900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.86450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.99900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.78550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.86450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 49 REMARK 465 SER A 50 REMARK 465 SER A 51 REMARK 465 GLY A 52 REMARK 465 SER A 53 REMARK 465 SER A 54 REMARK 465 GLY A 55 REMARK 465 GLY A 56 REMARK 465 THR A 57 REMARK 465 VAL A 58 REMARK 465 LYS A 59 REMARK 465 PRO A 136 REMARK 465 THR A 137 REMARK 465 PHE A 138 REMARK 465 SER A 139 REMARK 465 GLY B 49 REMARK 465 SER B 50 REMARK 465 SER B 51 REMARK 465 GLY B 52 REMARK 465 SER B 53 REMARK 465 SER B 54 REMARK 465 GLY B 55 REMARK 465 GLY B 56 REMARK 465 THR B 57 REMARK 465 VAL B 58 REMARK 465 LYS B 59 REMARK 465 PRO B 136 REMARK 465 THR B 137 REMARK 465 PHE B 138 REMARK 465 SER B 139 REMARK 465 GLY C 49 REMARK 465 SER C 50 REMARK 465 SER C 51 REMARK 465 GLY C 52 REMARK 465 SER C 53 REMARK 465 SER C 54 REMARK 465 GLY C 55 REMARK 465 GLY C 56 REMARK 465 THR C 57 REMARK 465 VAL C 58 REMARK 465 LYS C 59 REMARK 465 LEU C 133 REMARK 465 VAL C 134 REMARK 465 GLN C 135 REMARK 465 PRO C 136 REMARK 465 THR C 137 REMARK 465 PHE C 138 REMARK 465 SER C 139 REMARK 465 GLY D 49 REMARK 465 SER D 50 REMARK 465 SER D 51 REMARK 465 GLY D 52 REMARK 465 SER D 53 REMARK 465 SER D 54 REMARK 465 GLY D 55 REMARK 465 GLY D 56 REMARK 465 THR D 57 REMARK 465 VAL D 58 REMARK 465 LYS D 59 REMARK 465 VAL D 134 REMARK 465 GLN D 135 REMARK 465 PRO D 136 REMARK 465 THR D 137 REMARK 465 PHE D 138 REMARK 465 SER D 139 REMARK 465 GLY E 49 REMARK 465 SER E 50 REMARK 465 SER E 51 REMARK 465 GLY E 52 REMARK 465 SER E 53 REMARK 465 SER E 54 REMARK 465 GLY E 55 REMARK 465 GLY E 56 REMARK 465 THR E 57 REMARK 465 VAL E 58 REMARK 465 LYS E 59 REMARK 465 PRO E 136 REMARK 465 THR E 137 REMARK 465 PHE E 138 REMARK 465 SER E 139 REMARK 465 GLY F 49 REMARK 465 SER F 50 REMARK 465 SER F 51 REMARK 465 GLY F 52 REMARK 465 SER F 53 REMARK 465 SER F 54 REMARK 465 GLY F 55 REMARK 465 GLY F 56 REMARK 465 THR F 57 REMARK 465 VAL F 58 REMARK 465 LYS F 59 REMARK 465 GLN F 135 REMARK 465 PRO F 136 REMARK 465 THR F 137 REMARK 465 PHE F 138 REMARK 465 SER F 139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 200 O HOH B 252 1.86 REMARK 500 O HOH F 185 O HOH F 244 1.87 REMARK 500 O HOH C 145 O HOH D 220 1.89 REMARK 500 OD1 ASP A 82 O HOH A 237 1.97 REMARK 500 O HOH D 46 O HOH D 153 1.99 REMARK 500 OE1 GLU C 101 O HOH C 233 1.99 REMARK 500 OE2 GLU F 105 O HOH F 166 2.01 REMARK 500 O HOH A 182 O HOH C 44 2.04 REMARK 500 OD1 ASP D 85 O HOH D 242 2.06 REMARK 500 OD1 ASP A 74 O HOH A 273 2.07 REMARK 500 O HOH F 151 O HOH F 230 2.08 REMARK 500 OG1 THR E 95 O HOH E 143 2.10 REMARK 500 O HOH F 1 O HOH F 166 2.14 REMARK 500 O HOH A 229 O HOH A 232 2.15 REMARK 500 OE2 GLU F 105 O HOH F 1 2.15 REMARK 500 OD1 ASP D 82 O HOH D 281 2.17 REMARK 500 OE2 GLU A 105 O HOH A 154 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 149 O HOH E 161 1455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE C 79 36.26 -98.91 REMARK 500 ILE F 79 40.03 -106.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AQF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN CRLR/RAMP2 EXTRACELLULAR COMPLEX DBREF 3AQE A 56 139 UNP O60895 RAMP2_HUMAN 56 139 DBREF 3AQE B 56 139 UNP O60895 RAMP2_HUMAN 56 139 DBREF 3AQE C 56 139 UNP O60895 RAMP2_HUMAN 56 139 DBREF 3AQE D 56 139 UNP O60895 RAMP2_HUMAN 56 139 DBREF 3AQE E 56 139 UNP O60895 RAMP2_HUMAN 56 139 DBREF 3AQE F 56 139 UNP O60895 RAMP2_HUMAN 56 139 SEQADV 3AQE GLY A 49 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER A 50 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER A 51 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY A 52 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER A 53 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER A 54 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY A 55 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY B 49 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER B 50 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER B 51 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY B 52 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER B 53 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER B 54 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY B 55 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY C 49 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER C 50 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER C 51 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY C 52 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER C 53 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER C 54 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY C 55 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY D 49 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER D 50 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER D 51 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY D 52 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER D 53 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER D 54 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY D 55 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY E 49 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER E 50 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER E 51 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY E 52 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER E 53 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER E 54 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY E 55 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY F 49 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER F 50 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER F 51 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY F 52 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER F 53 UNP O60895 EXPRESSION TAG SEQADV 3AQE SER F 54 UNP O60895 EXPRESSION TAG SEQADV 3AQE GLY F 55 UNP O60895 EXPRESSION TAG SEQRES 1 A 91 GLY SER SER GLY SER SER GLY GLY THR VAL LYS ASN TYR SEQRES 2 A 91 GLU THR ALA VAL GLN PHE CYS TRP ASN HIS TYR LYS ASP SEQRES 3 A 91 GLN MSE ASP PRO ILE GLU LYS ASP TRP CYS ASP TRP ALA SEQRES 4 A 91 MSE ILE SER ARG PRO TYR SER THR LEU ARG ASP CYS LEU SEQRES 5 A 91 GLU HIS PHE ALA GLU LEU PHE ASP LEU GLY PHE PRO ASN SEQRES 6 A 91 PRO LEU ALA GLU ARG ILE ILE PHE GLU THR HIS GLN ILE SEQRES 7 A 91 HIS PHE ALA ASN CYS SER LEU VAL GLN PRO THR PHE SER SEQRES 1 B 91 GLY SER SER GLY SER SER GLY GLY THR VAL LYS ASN TYR SEQRES 2 B 91 GLU THR ALA VAL GLN PHE CYS TRP ASN HIS TYR LYS ASP SEQRES 3 B 91 GLN MSE ASP PRO ILE GLU LYS ASP TRP CYS ASP TRP ALA SEQRES 4 B 91 MSE ILE SER ARG PRO TYR SER THR LEU ARG ASP CYS LEU SEQRES 5 B 91 GLU HIS PHE ALA GLU LEU PHE ASP LEU GLY PHE PRO ASN SEQRES 6 B 91 PRO LEU ALA GLU ARG ILE ILE PHE GLU THR HIS GLN ILE SEQRES 7 B 91 HIS PHE ALA ASN CYS SER LEU VAL GLN PRO THR PHE SER SEQRES 1 C 91 GLY SER SER GLY SER SER GLY GLY THR VAL LYS ASN TYR SEQRES 2 C 91 GLU THR ALA VAL GLN PHE CYS TRP ASN HIS TYR LYS ASP SEQRES 3 C 91 GLN MSE ASP PRO ILE GLU LYS ASP TRP CYS ASP TRP ALA SEQRES 4 C 91 MSE ILE SER ARG PRO TYR SER THR LEU ARG ASP CYS LEU SEQRES 5 C 91 GLU HIS PHE ALA GLU LEU PHE ASP LEU GLY PHE PRO ASN SEQRES 6 C 91 PRO LEU ALA GLU ARG ILE ILE PHE GLU THR HIS GLN ILE SEQRES 7 C 91 HIS PHE ALA ASN CYS SER LEU VAL GLN PRO THR PHE SER SEQRES 1 D 91 GLY SER SER GLY SER SER GLY GLY THR VAL LYS ASN TYR SEQRES 2 D 91 GLU THR ALA VAL GLN PHE CYS TRP ASN HIS TYR LYS ASP SEQRES 3 D 91 GLN MSE ASP PRO ILE GLU LYS ASP TRP CYS ASP TRP ALA SEQRES 4 D 91 MSE ILE SER ARG PRO TYR SER THR LEU ARG ASP CYS LEU SEQRES 5 D 91 GLU HIS PHE ALA GLU LEU PHE ASP LEU GLY PHE PRO ASN SEQRES 6 D 91 PRO LEU ALA GLU ARG ILE ILE PHE GLU THR HIS GLN ILE SEQRES 7 D 91 HIS PHE ALA ASN CYS SER LEU VAL GLN PRO THR PHE SER SEQRES 1 E 91 GLY SER SER GLY SER SER GLY GLY THR VAL LYS ASN TYR SEQRES 2 E 91 GLU THR ALA VAL GLN PHE CYS TRP ASN HIS TYR LYS ASP SEQRES 3 E 91 GLN MSE ASP PRO ILE GLU LYS ASP TRP CYS ASP TRP ALA SEQRES 4 E 91 MSE ILE SER ARG PRO TYR SER THR LEU ARG ASP CYS LEU SEQRES 5 E 91 GLU HIS PHE ALA GLU LEU PHE ASP LEU GLY PHE PRO ASN SEQRES 6 E 91 PRO LEU ALA GLU ARG ILE ILE PHE GLU THR HIS GLN ILE SEQRES 7 E 91 HIS PHE ALA ASN CYS SER LEU VAL GLN PRO THR PHE SER SEQRES 1 F 91 GLY SER SER GLY SER SER GLY GLY THR VAL LYS ASN TYR SEQRES 2 F 91 GLU THR ALA VAL GLN PHE CYS TRP ASN HIS TYR LYS ASP SEQRES 3 F 91 GLN MSE ASP PRO ILE GLU LYS ASP TRP CYS ASP TRP ALA SEQRES 4 F 91 MSE ILE SER ARG PRO TYR SER THR LEU ARG ASP CYS LEU SEQRES 5 F 91 GLU HIS PHE ALA GLU LEU PHE ASP LEU GLY PHE PRO ASN SEQRES 6 F 91 PRO LEU ALA GLU ARG ILE ILE PHE GLU THR HIS GLN ILE SEQRES 7 F 91 HIS PHE ALA ASN CYS SER LEU VAL GLN PRO THR PHE SER MODRES 3AQE MSE A 76 MET SELENOMETHIONINE MODRES 3AQE MSE A 88 MET SELENOMETHIONINE MODRES 3AQE MSE B 76 MET SELENOMETHIONINE MODRES 3AQE MSE B 88 MET SELENOMETHIONINE MODRES 3AQE MSE C 76 MET SELENOMETHIONINE MODRES 3AQE MSE C 88 MET SELENOMETHIONINE MODRES 3AQE MSE D 76 MET SELENOMETHIONINE MODRES 3AQE MSE D 88 MET SELENOMETHIONINE MODRES 3AQE MSE E 76 MET SELENOMETHIONINE MODRES 3AQE MSE E 88 MET SELENOMETHIONINE MODRES 3AQE MSE F 76 MET SELENOMETHIONINE MODRES 3AQE MSE F 88 MET SELENOMETHIONINE HET MSE A 76 8 HET MSE A 88 8 HET MSE B 76 8 HET MSE B 88 8 HET MSE C 76 8 HET MSE C 88 8 HET MSE D 76 8 HET MSE D 88 8 HET MSE E 76 8 HET MSE E 88 8 HET MSE F 76 8 HET MSE F 88 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 7 HOH *282(H2 O) HELIX 1 1 ASN A 60 ASP A 77 1 18 HELIX 2 2 PRO A 78 TRP A 83 5 6 HELIX 3 3 ASP A 85 PHE A 107 1 23 HELIX 4 4 ASN A 113 HIS A 127 1 15 HELIX 5 5 TYR B 61 ASP B 77 1 17 HELIX 6 6 PRO B 78 TRP B 83 5 6 HELIX 7 7 ILE B 89 PHE B 107 1 19 HELIX 8 8 ASN B 113 HIS B 127 1 15 HELIX 9 9 TYR C 61 ASP C 77 1 17 HELIX 10 10 PRO C 78 TRP C 83 5 6 HELIX 11 11 ASP C 85 PHE C 107 1 23 HELIX 12 12 ASN C 113 HIS C 127 1 15 HELIX 13 13 TYR D 61 ASP D 77 1 17 HELIX 14 14 PRO D 78 TRP D 83 5 6 HELIX 15 15 ASP D 85 PHE D 107 1 23 HELIX 16 16 ASN D 113 PHE D 128 1 16 HELIX 17 17 TYR E 61 ASP E 77 1 17 HELIX 18 18 PRO E 78 TRP E 83 5 6 HELIX 19 19 ASP E 85 PHE E 107 1 23 HELIX 20 20 ASN E 113 HIS E 127 1 15 HELIX 21 21 TYR F 61 ASP F 77 1 17 HELIX 22 22 PRO F 78 TRP F 83 5 6 HELIX 23 23 ASP F 85 PHE F 107 1 23 HELIX 24 24 ASN F 113 HIS F 127 1 15 SSBOND 1 CYS A 68 CYS A 99 1555 1555 2.03 SSBOND 2 CYS A 84 CYS A 131 1555 1555 2.03 SSBOND 3 CYS B 68 CYS B 99 1555 1555 2.03 SSBOND 4 CYS B 84 CYS B 131 1555 1555 2.03 SSBOND 5 CYS C 68 CYS C 99 1555 1555 2.03 SSBOND 6 CYS C 84 CYS C 131 1555 1555 2.03 SSBOND 7 CYS D 68 CYS D 99 1555 1555 2.03 SSBOND 8 CYS D 84 CYS D 131 1555 1555 2.03 SSBOND 9 CYS E 68 CYS E 99 1555 1555 2.03 SSBOND 10 CYS E 84 CYS E 131 1555 1555 2.03 SSBOND 11 CYS F 68 CYS F 99 1555 1555 2.03 SSBOND 12 CYS F 84 CYS F 131 1555 1555 2.03 LINK C GLN A 75 N MSE A 76 1555 1555 1.33 LINK C MSE A 76 N ASP A 77 1555 1555 1.33 LINK C ALA A 87 N MSE A 88 1555 1555 1.33 LINK C MSE A 88 N ILE A 89 1555 1555 1.33 LINK C GLN B 75 N MSE B 76 1555 1555 1.33 LINK C MSE B 76 N ASP B 77 1555 1555 1.33 LINK C ALA B 87 N MSE B 88 1555 1555 1.33 LINK C MSE B 88 N ILE B 89 1555 1555 1.33 LINK C GLN C 75 N MSE C 76 1555 1555 1.33 LINK C MSE C 76 N ASP C 77 1555 1555 1.33 LINK C ALA C 87 N MSE C 88 1555 1555 1.33 LINK C MSE C 88 N ILE C 89 1555 1555 1.33 LINK C GLN D 75 N MSE D 76 1555 1555 1.33 LINK C MSE D 76 N ASP D 77 1555 1555 1.33 LINK C ALA D 87 N MSE D 88 1555 1555 1.33 LINK C MSE D 88 N ILE D 89 1555 1555 1.33 LINK C GLN E 75 N MSE E 76 1555 1555 1.33 LINK C MSE E 76 N ASP E 77 1555 1555 1.33 LINK C ALA E 87 N MSE E 88 1555 1555 1.33 LINK C MSE E 88 N ILE E 89 1555 1555 1.33 LINK C GLN F 75 N MSE F 76 1555 1555 1.33 LINK C MSE F 76 N ASP F 77 1555 1555 1.33 LINK C ALA F 87 N MSE F 88 1555 1555 1.33 LINK C MSE F 88 N ILE F 89 1555 1555 1.33 CISPEP 1 PHE A 111 PRO A 112 0 3.24 CISPEP 2 PHE B 111 PRO B 112 0 -0.41 CISPEP 3 PHE C 111 PRO C 112 0 2.65 CISPEP 4 PHE D 111 PRO D 112 0 2.43 CISPEP 5 PHE E 111 PRO E 112 0 -1.65 CISPEP 6 PHE F 111 PRO F 112 0 2.19 CRYST1 59.571 89.729 91.998 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016787 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011145 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010870 0.00000