HEADER PROTEIN BINDING 09-DEC-10 3AS4 TITLE MAMA AMB-1 C2221 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAMA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 41-217; COMPND 5 SYNONYM: TETRATRICOPEPTIDE-REPEAT PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNETOSPIRILLUM MAGNETOTACTICUM; SOURCE 3 ORGANISM_COMMON: AQUASPIRILLUM MAGNETOTACTICUM; SOURCE 4 ORGANISM_TAXID: 342108; SOURCE 5 STRAIN: AMB-1; SOURCE 6 GENE: MAM22, MAMA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET52B KEYWDS TETRATRICOPEPTIDE REPEATS (TPR) CONTAINING PROTEIN, TPR PROTEIN, KEYWDS 2 PROTEIN-PROTEIN INTERACTIONS, MAMA, CYTOSOL, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR N.ZEYTUNI,G.DAVIDOV,R.ZARIVACH REVDAT 3 01-NOV-23 3AS4 1 REMARK SEQADV REVDAT 2 26-JUN-13 3AS4 1 JRNL REVDAT 1 20-JUL-11 3AS4 0 JRNL AUTH N.ZEYTUNI,E.OZYAMAK,K.BEN-HARUSH,G.DAVIDOV,M.LEVIN,Y.GAT, JRNL AUTH 2 T.MOYAL,A.BRIK,A.KOMEILI,R.ZARIVACH JRNL TITL SELF-RECOGNITION MECHANISM OF MAMA, A MAGNETOSOME-ASSOCIATED JRNL TITL 2 TPR-CONTAINING PROTEIN, PROMOTES COMPLEX ASSEMBLY JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 E480 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21784982 JRNL DOI 10.1073/PNAS.1103367108 REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.11 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 12779 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 639 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 814 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1339 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 68 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 58.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.64000 REMARK 3 B22 (A**2) : -5.10000 REMARK 3 B33 (A**2) : -4.54000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.224 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.187 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.571 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.951 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1387 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 919 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1880 ; 1.624 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2231 ; 0.956 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 169 ; 6.336 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 68 ;44.922 ;23.824 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 232 ;17.999 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;15.345 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 207 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1534 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 285 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 843 ; 0.752 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 345 ; 0.202 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1347 ; 1.338 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 544 ; 2.145 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 533 ; 3.325 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 43 A 53 REMARK 3 ORIGIN FOR THE GROUP (A): -11.5193 -33.2366 -0.8358 REMARK 3 T TENSOR REMARK 3 T11: 1.4040 T22: 0.5630 REMARK 3 T33: 0.6752 T12: 0.3051 REMARK 3 T13: -0.0349 T23: 0.4802 REMARK 3 L TENSOR REMARK 3 L11: 9.4342 L22: 28.8874 REMARK 3 L33: 54.2149 L12: -15.4381 REMARK 3 L13: 4.3905 L23: -20.8504 REMARK 3 S TENSOR REMARK 3 S11: -1.7782 S12: -0.5063 S13: -0.5387 REMARK 3 S21: 0.5406 S22: -0.5918 S23: 0.0505 REMARK 3 S31: 5.3244 S32: 2.9867 S33: 2.3700 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): -15.9320 -24.8444 -4.2742 REMARK 3 T TENSOR REMARK 3 T11: 0.4066 T22: 0.0683 REMARK 3 T33: 0.2433 T12: -0.0126 REMARK 3 T13: -0.0617 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 5.5049 L22: 4.9423 REMARK 3 L33: 13.5835 L12: 0.5046 REMARK 3 L13: 1.1344 L23: 2.0876 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: -0.3012 S13: -0.3359 REMARK 3 S21: 0.8143 S22: 0.0074 S23: -0.1868 REMARK 3 S31: 1.0196 S32: 0.1493 S33: -0.0701 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): -19.7348 -18.5618 -8.2588 REMARK 3 T TENSOR REMARK 3 T11: 0.2593 T22: 0.1635 REMARK 3 T33: 0.1847 T12: -0.0131 REMARK 3 T13: 0.0013 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 10.0427 L22: 5.1646 REMARK 3 L33: 7.7896 L12: -3.1954 REMARK 3 L13: 5.3968 L23: 1.3141 REMARK 3 S TENSOR REMARK 3 S11: 0.2664 S12: 0.3319 S13: 0.1395 REMARK 3 S21: 0.2482 S22: -0.2604 S23: -0.0201 REMARK 3 S31: 0.1575 S32: -0.4868 S33: -0.0060 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 105 REMARK 3 ORIGIN FOR THE GROUP (A): -21.8080 -13.5685 -1.8262 REMARK 3 T TENSOR REMARK 3 T11: 0.2116 T22: 0.2850 REMARK 3 T33: 0.1726 T12: -0.0669 REMARK 3 T13: 0.0488 T23: -0.0158 REMARK 3 L TENSOR REMARK 3 L11: 15.9437 L22: 11.5542 REMARK 3 L33: 18.3986 L12: -4.4634 REMARK 3 L13: 4.7078 L23: 5.5264 REMARK 3 S TENSOR REMARK 3 S11: 0.2243 S12: -0.3818 S13: -0.1169 REMARK 3 S21: 0.6179 S22: -0.6123 S23: 1.0063 REMARK 3 S31: 0.6473 S32: -1.2188 S33: 0.3881 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 106 A 122 REMARK 3 ORIGIN FOR THE GROUP (A): -11.0376 -9.8548 -3.4544 REMARK 3 T TENSOR REMARK 3 T11: 0.1885 T22: 0.2083 REMARK 3 T33: 0.2738 T12: -0.0002 REMARK 3 T13: 0.0115 T23: 0.0607 REMARK 3 L TENSOR REMARK 3 L11: 4.9017 L22: 1.9933 REMARK 3 L33: 13.0535 L12: 0.5689 REMARK 3 L13: 1.6326 L23: 2.1713 REMARK 3 S TENSOR REMARK 3 S11: -0.0324 S12: -0.3153 S13: 0.0785 REMARK 3 S21: 0.1014 S22: -0.0731 S23: -0.2764 REMARK 3 S31: 0.2955 S32: 0.6497 S33: 0.1055 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 123 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): -21.9429 -4.2913 -11.4639 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.2615 REMARK 3 T33: 0.2380 T12: 0.0129 REMARK 3 T13: -0.0126 T23: -0.0478 REMARK 3 L TENSOR REMARK 3 L11: 11.5452 L22: 12.8613 REMARK 3 L33: 13.1639 L12: -0.0735 REMARK 3 L13: 3.6019 L23: -4.7055 REMARK 3 S TENSOR REMARK 3 S11: 0.1671 S12: 0.3756 S13: -0.1849 REMARK 3 S21: -0.5270 S22: -0.2950 S23: 1.1910 REMARK 3 S31: 0.3853 S32: -1.1716 S33: 0.1279 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): -13.3128 0.1140 -7.4644 REMARK 3 T TENSOR REMARK 3 T11: 0.1874 T22: 0.2881 REMARK 3 T33: 0.2113 T12: 0.0243 REMARK 3 T13: -0.0239 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 5.6241 L22: 8.5803 REMARK 3 L33: 4.8247 L12: 0.0698 REMARK 3 L13: -2.7640 L23: 0.7863 REMARK 3 S TENSOR REMARK 3 S11: -0.1089 S12: -0.4384 S13: 0.3272 REMARK 3 S21: 0.0804 S22: 0.1394 S23: 0.0169 REMARK 3 S31: 0.0064 S32: 0.2318 S33: -0.0306 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 152 REMARK 3 ORIGIN FOR THE GROUP (A): -6.3044 -4.0332 -16.0569 REMARK 3 T TENSOR REMARK 3 T11: 0.2408 T22: 0.2931 REMARK 3 T33: 0.1942 T12: -0.0014 REMARK 3 T13: 0.0173 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 6.8332 L22: 4.1189 REMARK 3 L33: 2.1592 L12: -1.7706 REMARK 3 L13: -0.1161 L23: 0.7795 REMARK 3 S TENSOR REMARK 3 S11: -0.0270 S12: -0.2287 S13: -0.1383 REMARK 3 S21: 0.1828 S22: 0.1299 S23: -0.4468 REMARK 3 S31: -0.0354 S32: 0.3874 S33: -0.1029 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 153 A 179 REMARK 3 ORIGIN FOR THE GROUP (A): -11.7237 4.3950 -19.3165 REMARK 3 T TENSOR REMARK 3 T11: 0.2561 T22: 0.2018 REMARK 3 T33: 0.1371 T12: 0.0316 REMARK 3 T13: -0.0048 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 5.9262 L22: 3.3328 REMARK 3 L33: 4.8073 L12: -1.8519 REMARK 3 L13: -2.4812 L23: 1.7910 REMARK 3 S TENSOR REMARK 3 S11: 0.0940 S12: 0.0882 S13: 0.2822 REMARK 3 S21: -0.2211 S22: 0.0730 S23: -0.0249 REMARK 3 S31: -0.3764 S32: 0.0849 S33: -0.1669 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 180 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): -13.7625 3.7859 -27.8890 REMARK 3 T TENSOR REMARK 3 T11: 0.3675 T22: 0.2682 REMARK 3 T33: 0.1101 T12: 0.1035 REMARK 3 T13: -0.0324 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 4.1524 L22: 6.6970 REMARK 3 L33: 3.3065 L12: 1.7221 REMARK 3 L13: -0.0537 L23: 0.5050 REMARK 3 S TENSOR REMARK 3 S11: 0.1061 S12: 0.5294 S13: -0.3605 REMARK 3 S21: -0.1210 S22: -0.1300 S23: 0.0206 REMARK 3 S31: 0.2506 S32: 0.3632 S33: 0.0240 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 193 A 205 REMARK 3 ORIGIN FOR THE GROUP (A): -15.1737 13.2005 -29.5499 REMARK 3 T TENSOR REMARK 3 T11: 0.2911 T22: 0.2364 REMARK 3 T33: 0.1431 T12: 0.0153 REMARK 3 T13: -0.0192 T23: 0.0829 REMARK 3 L TENSOR REMARK 3 L11: 6.3225 L22: 6.6971 REMARK 3 L33: 11.7573 L12: -4.2899 REMARK 3 L13: -3.1651 L23: -0.7279 REMARK 3 S TENSOR REMARK 3 S11: -0.1041 S12: 0.0572 S13: 0.1525 REMARK 3 S21: 0.0379 S22: -0.2504 S23: 0.1896 REMARK 3 S31: 0.2451 S32: 0.5778 S33: 0.3545 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 206 A 212 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5735 2.0143 -37.4539 REMARK 3 T TENSOR REMARK 3 T11: 0.9852 T22: 0.8097 REMARK 3 T33: 0.1603 T12: 0.2496 REMARK 3 T13: 0.0725 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 32.1346 L22: 40.7406 REMARK 3 L33: 7.4034 L12: -29.9829 REMARK 3 L13: -8.5484 L23: -0.0850 REMARK 3 S TENSOR REMARK 3 S11: 0.0645 S12: 0.0510 S13: -1.6392 REMARK 3 S21: -0.4700 S22: -1.0592 S23: 0.6810 REMARK 3 S31: 0.3108 S32: 0.8225 S33: 0.9947 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3AS4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000029627. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-09 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12885 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 31.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.46700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 3AS5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, GLYCEROL, TRIS, REMARK 280 NACL, PH 8.9, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.99950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.99950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.38800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.14100 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.38800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.14100 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.99950 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.38800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 39.14100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 47.99950 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.38800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 39.14100 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 39 REMARK 465 GLY A 40 REMARK 465 ASN A 41 REMARK 465 ASP A 42 REMARK 465 GLU A 213 REMARK 465 GLY A 214 REMARK 465 ALA A 215 REMARK 465 SER A 216 REMARK 465 VAL A 217 REMARK 465 GLU A 218 REMARK 465 LEU A 219 REMARK 465 ALA A 220 REMARK 465 LEU A 221 REMARK 465 VAL A 222 REMARK 465 PRO A 223 REMARK 465 ARG A 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 101 CG GLU A 101 CD 0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 211 -70.45 -109.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 8 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AS5 RELATED DB: PDB REMARK 900 WILD TYPE, DIFFERENT CRYSTAL FORM REMARK 900 RELATED ID: 3AS8 RELATED DB: PDB REMARK 900 HOMOLOGOUS PROTEIN STRUCTURE REMARK 900 RELATED ID: 3ASF RELATED DB: PDB REMARK 900 HOMOLOGOUS PROTEIN STRUCTURE REMARK 900 RELATED ID: 3ASD RELATED DB: PDB REMARK 900 R50E MUTANT REMARK 900 RELATED ID: 3ASG RELATED DB: PDB REMARK 900 D159K MUTANT REMARK 900 RELATED ID: 3ASH RELATED DB: PDB REMARK 900 D159K MUTANT DBREF 3AS4 A 41 217 UNP Q50224 Q50224_MAGMG 41 217 SEQADV 3AS4 MET A 39 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 GLY A 40 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 GLU A 218 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 LEU A 219 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 ALA A 220 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 LEU A 221 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 VAL A 222 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 PRO A 223 UNP Q50224 EXPRESSION TAG SEQADV 3AS4 ARG A 224 UNP Q50224 EXPRESSION TAG SEQRES 1 A 186 MET GLY ASN ASP ASP ILE ARG GLN VAL TYR TYR ARG ASP SEQRES 2 A 186 LYS GLY ILE SER HIS ALA LYS ALA GLY ARG TYR SER GLN SEQRES 3 A 186 ALA VAL MET LEU LEU GLU GLN VAL TYR ASP ALA ASP ALA SEQRES 4 A 186 PHE ASP VAL ASP VAL ALA LEU HIS LEU GLY ILE ALA TYR SEQRES 5 A 186 VAL LYS THR GLY ALA VAL ASP ARG GLY THR GLU LEU LEU SEQRES 6 A 186 GLU ARG SER LEU ALA ASP ALA PRO ASP ASN VAL LYS VAL SEQRES 7 A 186 ALA THR VAL LEU GLY LEU THR TYR VAL GLN VAL GLN LYS SEQRES 8 A 186 TYR ASP LEU ALA VAL PRO LEU LEU ILE LYS VAL ALA GLU SEQRES 9 A 186 ALA ASN PRO ILE ASN PHE ASN VAL ARG PHE ARG LEU GLY SEQRES 10 A 186 VAL ALA LEU ASP ASN LEU GLY ARG PHE ASP GLU ALA ILE SEQRES 11 A 186 ASP SER PHE LYS ILE ALA LEU GLY LEU ARG PRO ASN GLU SEQRES 12 A 186 GLY LYS VAL HIS ARG ALA ILE ALA PHE SER TYR GLU GLN SEQRES 13 A 186 MET GLY ARG HIS GLU GLU ALA LEU PRO HIS PHE LYS LYS SEQRES 14 A 186 ALA ASN GLU LEU ASP GLU GLY ALA SER VAL GLU LEU ALA SEQRES 15 A 186 LEU VAL PRO ARG HET SO4 A 1 5 HET SO4 A 2 5 HET SO4 A 4 5 HET SO4 A 6 5 HET SO4 A 7 5 HET SO4 A 8 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 6(O4 S 2-) FORMUL 8 HOH *68(H2 O) HELIX 1 1 ASP A 43 GLY A 60 1 18 HELIX 2 2 ARG A 61 GLU A 70 1 10 HELIX 3 3 ASP A 79 THR A 93 1 15 HELIX 4 4 ALA A 95 ALA A 110 1 16 HELIX 5 5 ASN A 113 GLN A 128 1 16 HELIX 6 6 LYS A 129 ASN A 144 1 16 HELIX 7 7 ASN A 147 LEU A 161 1 15 HELIX 8 8 ARG A 163 ARG A 178 1 16 HELIX 9 9 GLU A 181 MET A 195 1 15 HELIX 10 10 ARG A 197 ASP A 212 1 16 SITE 1 AC1 1 ARG A 61 SITE 1 AC2 4 ALA A 95 VAL A 96 ASP A 97 ARG A 98 SITE 1 AC3 4 HOH A 10 HOH A 33 ASN A 149 ARG A 178 SITE 1 AC4 3 LYS A 92 GLY A 196 HIS A 198 SITE 1 AC5 1 ARG A 105 SITE 1 AC6 2 ARG A 153 HOH A 240 CRYST1 80.776 78.282 95.999 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012380 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012774 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010417 0.00000