HEADER PROTEIN BINDING 10-DEC-10 3ASD TITLE MAMA R50E MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAMA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 41-217; COMPND 5 SYNONYM: TETRATRICOPEPTIDE-REPEAT PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNETOSPIRILLUM MAGNETOTACTICUM; SOURCE 3 ORGANISM_COMMON: AQUASPIRILLUM MAGNETOTACTICUM; SOURCE 4 ORGANISM_TAXID: 342108; SOURCE 5 STRAIN: AMB-1; SOURCE 6 GENE: MAM22, MAMA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET52B KEYWDS TETRATRICOPEPTIDE REPEATS (TPR) CONTAINING PROTEIN, TPR PROTEIN, KEYWDS 2 PROTEIN-PROTEIN INTERACTIONS, MAMA, CYTOSOL, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR N.ZEYTUNI,G.DAVIDOV,R.ZARIVACH REVDAT 3 01-NOV-23 3ASD 1 SEQADV REVDAT 2 26-JUN-13 3ASD 1 JRNL REVDAT 1 20-JUL-11 3ASD 0 JRNL AUTH N.ZEYTUNI,E.OZYAMAK,K.BEN-HARUSH,G.DAVIDOV,M.LEVIN,Y.GAT, JRNL AUTH 2 T.MOYAL,A.BRIK,A.KOMEILI,R.ZARIVACH JRNL TITL SELF-RECOGNITION MECHANISM OF MAMA, A MAGNETOSOME-ASSOCIATED JRNL TITL 2 TPR-CONTAINING PROTEIN, PROMOTES COMPLEX ASSEMBLY JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 E480 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 21784982 JRNL DOI 10.1073/PNAS.1103367108 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.71 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 7946 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.275 REMARK 3 R VALUE (WORKING SET) : 0.272 REMARK 3 FREE R VALUE : 0.325 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.600 REMARK 3 FREE R VALUE TEST SET COUNT : 362 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 532 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.4620 REMARK 3 BIN FREE R VALUE SET COUNT : 26 REMARK 3 BIN FREE R VALUE : 0.4400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1069 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 20 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.26000 REMARK 3 B22 (A**2) : 1.26000 REMARK 3 B33 (A**2) : -2.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.310 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.491 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.890 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.886 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1106 ; 0.020 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 741 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1503 ; 1.851 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 1810 ; 1.065 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 142 ; 9.273 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 56 ;41.060 ;24.464 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 187 ;18.167 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;16.455 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 171 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1255 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 225 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 688 ; 0.680 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 281 ; 0.159 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1104 ; 1.257 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 418 ; 2.025 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 396 ; 3.236 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 78 A 82 REMARK 3 ORIGIN FOR THE GROUP (A): -16.4862 32.6615 8.8383 REMARK 3 T TENSOR REMARK 3 T11: 0.4079 T22: 0.8176 REMARK 3 T33: 0.5215 T12: -0.1109 REMARK 3 T13: -0.0477 T23: -0.2070 REMARK 3 L TENSOR REMARK 3 L11: 0.3141 L22: 1.7651 REMARK 3 L33: 9.2027 L12: 0.7413 REMARK 3 L13: 1.6979 L23: 4.0265 REMARK 3 S TENSOR REMARK 3 S11: -0.1113 S12: 0.0452 S13: -0.0053 REMARK 3 S21: -0.2544 S22: 0.1856 S23: -0.0565 REMARK 3 S31: -0.6507 S32: 0.3416 S33: -0.0743 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 96 REMARK 3 ORIGIN FOR THE GROUP (A): -17.0483 32.8798 -4.1620 REMARK 3 T TENSOR REMARK 3 T11: 0.5758 T22: 0.5837 REMARK 3 T33: 0.5957 T12: -0.0768 REMARK 3 T13: -0.0225 T23: 0.1932 REMARK 3 L TENSOR REMARK 3 L11: 9.3519 L22: 3.2245 REMARK 3 L33: 2.3856 L12: 5.4147 REMARK 3 L13: -4.4549 L23: -2.7099 REMARK 3 S TENSOR REMARK 3 S11: 0.0927 S12: -0.0074 S13: 0.4950 REMARK 3 S21: 0.0724 S22: -0.1478 S23: 0.0864 REMARK 3 S31: -0.2820 S32: 0.2657 S33: 0.0551 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 97 A 113 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2221 30.2872 3.5133 REMARK 3 T TENSOR REMARK 3 T11: 0.4022 T22: 0.6161 REMARK 3 T33: 0.6011 T12: -0.1627 REMARK 3 T13: -0.1153 T23: -0.0456 REMARK 3 L TENSOR REMARK 3 L11: 12.1301 L22: 1.5762 REMARK 3 L33: 1.6290 L12: -0.5529 REMARK 3 L13: -0.3676 L23: 1.4952 REMARK 3 S TENSOR REMARK 3 S11: 0.1232 S12: -0.3024 S13: 0.7538 REMARK 3 S21: -0.0673 S22: 0.0071 S23: -0.4066 REMARK 3 S31: -0.3032 S32: 0.1248 S33: -0.1303 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 114 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): -18.2680 19.2186 -5.2922 REMARK 3 T TENSOR REMARK 3 T11: 0.0503 T22: 0.3803 REMARK 3 T33: 0.0881 T12: 0.0174 REMARK 3 T13: -0.0051 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 4.6212 L22: 4.4266 REMARK 3 L33: 5.2725 L12: 0.2188 REMARK 3 L13: -1.2930 L23: 0.9649 REMARK 3 S TENSOR REMARK 3 S11: 0.2731 S12: -0.0057 S13: 0.1154 REMARK 3 S21: -0.0682 S22: -0.2008 S23: 0.3646 REMARK 3 S31: 0.2493 S32: -0.4562 S33: -0.0723 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): -7.4858 18.3267 -9.0531 REMARK 3 T TENSOR REMARK 3 T11: 0.0517 T22: 0.3023 REMARK 3 T33: 0.0675 T12: -0.0202 REMARK 3 T13: -0.0105 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 3.0469 L22: 4.2405 REMARK 3 L33: 5.0637 L12: -1.5912 REMARK 3 L13: -0.4954 L23: -0.0693 REMARK 3 S TENSOR REMARK 3 S11: 0.1187 S12: -0.4205 S13: 0.2171 REMARK 3 S21: -0.2827 S22: 0.0391 S23: -0.1200 REMARK 3 S31: -0.0561 S32: 0.0062 S33: -0.1578 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 173 A 193 REMARK 3 ORIGIN FOR THE GROUP (A): -4.3051 7.3319 -13.6555 REMARK 3 T TENSOR REMARK 3 T11: 0.3993 T22: 0.3077 REMARK 3 T33: 0.1354 T12: 0.0302 REMARK 3 T13: -0.0505 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 3.0921 L22: 0.5844 REMARK 3 L33: 4.0204 L12: -0.0670 REMARK 3 L13: 2.6899 L23: 0.9105 REMARK 3 S TENSOR REMARK 3 S11: 0.3229 S12: -0.0937 S13: -0.4778 REMARK 3 S21: 0.1500 S22: 0.0289 S23: 0.0586 REMARK 3 S31: 0.6838 S32: 0.0579 S33: -0.3518 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 194 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 0.7349 11.0759 -24.5666 REMARK 3 T TENSOR REMARK 3 T11: 0.3556 T22: 0.5779 REMARK 3 T33: 0.3178 T12: 0.0450 REMARK 3 T13: 0.0279 T23: -0.1125 REMARK 3 L TENSOR REMARK 3 L11: 0.6450 L22: 4.9179 REMARK 3 L33: 3.2887 L12: 0.4468 REMARK 3 L13: 1.3312 L23: -0.6394 REMARK 3 S TENSOR REMARK 3 S11: 0.0525 S12: 0.5123 S13: -0.2276 REMARK 3 S21: -0.0691 S22: 0.2712 S23: -0.6576 REMARK 3 S31: 0.0710 S32: 1.0820 S33: -0.3237 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 205 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): -3.5578 -2.0353 -18.1217 REMARK 3 T TENSOR REMARK 3 T11: 0.6695 T22: 0.6893 REMARK 3 T33: 0.7202 T12: 0.1704 REMARK 3 T13: -0.0013 T23: -0.0565 REMARK 3 L TENSOR REMARK 3 L11: 2.0525 L22: 20.5253 REMARK 3 L33: 14.0130 L12: -2.8752 REMARK 3 L13: 5.2961 L23: -9.6560 REMARK 3 S TENSOR REMARK 3 S11: 0.1409 S12: 0.0190 S13: 0.2329 REMARK 3 S21: 1.1491 S22: -0.9512 S23: -0.5123 REMARK 3 S31: 0.1869 S32: 0.1817 S33: 0.8103 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES: WITH TLS ADDED REMARK 4 REMARK 4 3ASD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-DEC-10. REMARK 100 THE DEPOSITION ID IS D_1000029636. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8008 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.60 REMARK 200 R MERGE FOR SHELL (I) : 0.28500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: COOT REMARK 200 STARTING MODEL: PDB ENTRY 3AS5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, NACL, PH 6, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.72450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 155.58675 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 51.86225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 103.72450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 51.86225 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 155.58675 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 39 REMARK 465 GLY A 40 REMARK 465 ASN A 41 REMARK 465 ASP A 42 REMARK 465 ASP A 43 REMARK 465 ILE A 44 REMARK 465 ARG A 45 REMARK 465 GLN A 46 REMARK 465 VAL A 47 REMARK 465 TYR A 48 REMARK 465 TYR A 49 REMARK 465 GLU A 50 REMARK 465 ASP A 51 REMARK 465 LYS A 52 REMARK 465 GLY A 53 REMARK 465 ILE A 54 REMARK 465 SER A 55 REMARK 465 HIS A 56 REMARK 465 ALA A 57 REMARK 465 LYS A 58 REMARK 465 ALA A 59 REMARK 465 GLY A 60 REMARK 465 ARG A 61 REMARK 465 TYR A 62 REMARK 465 SER A 63 REMARK 465 GLN A 64 REMARK 465 ALA A 65 REMARK 465 VAL A 66 REMARK 465 MET A 67 REMARK 465 LEU A 68 REMARK 465 LEU A 69 REMARK 465 GLU A 70 REMARK 465 GLN A 71 REMARK 465 VAL A 72 REMARK 465 TYR A 73 REMARK 465 ASP A 74 REMARK 465 ALA A 75 REMARK 465 ASP A 76 REMARK 465 ALA A 77 REMARK 465 ALA A 215 REMARK 465 SER A 216 REMARK 465 VAL A 217 REMARK 465 GLU A 218 REMARK 465 LEU A 219 REMARK 465 ALA A 220 REMARK 465 LEU A 221 REMARK 465 VAL A 222 REMARK 465 PRO A 223 REMARK 465 ARG A 224 REMARK 465 GLY A 225 REMARK 465 SER A 226 REMARK 465 SER A 227 REMARK 465 ALA A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 HIS A 237 REMARK 465 HIS A 238 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2 O HOH A 37 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 120 CB - CG - CD1 ANGL. DEV. = -10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 108 -153.35 -12.97 REMARK 500 ASP A 109 38.28 -87.09 REMARK 500 ASP A 109 45.42 -92.10 REMARK 500 PRO A 111 -105.53 -136.93 REMARK 500 ASP A 112 -20.43 149.31 REMARK 500 ARG A 163 69.21 -110.43 REMARK 500 ARG A 197 75.66 -114.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 108 ASP A 109 147.49 REMARK 500 ALA A 108 ASP A 109 146.96 REMARK 500 PRO A 111 ASP A 112 -128.75 REMARK 500 ASP A 112 ASN A 113 142.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AS4 RELATED DB: PDB REMARK 900 WILD TYPE REMARK 900 RELATED ID: 3AS5 RELATED DB: PDB REMARK 900 WILD TYPE REMARK 900 RELATED ID: 3AS8 RELATED DB: PDB REMARK 900 HOMOLOGOUS PROTEIN STRUCTURE REMARK 900 RELATED ID: 3ASF RELATED DB: PDB REMARK 900 HOMOLOGOUS PROTEIN STRUCTURE REMARK 900 RELATED ID: 3ASG RELATED DB: PDB REMARK 900 D159K MUTANT REMARK 900 RELATED ID: 3ASH RELATED DB: PDB REMARK 900 D159K MUTANT DBREF 3ASD A 41 217 UNP Q50224 Q50224_MAGMG 41 217 SEQADV 3ASD MET A 39 UNP Q50224 EXPRESSION TAG SEQADV 3ASD GLY A 40 UNP Q50224 EXPRESSION TAG SEQADV 3ASD GLU A 50 UNP Q50224 ARG 50 ENGINEERED MUTATION SEQADV 3ASD GLU A 218 UNP Q50224 EXPRESSION TAG SEQADV 3ASD LEU A 219 UNP Q50224 EXPRESSION TAG SEQADV 3ASD ALA A 220 UNP Q50224 EXPRESSION TAG SEQADV 3ASD LEU A 221 UNP Q50224 EXPRESSION TAG SEQADV 3ASD VAL A 222 UNP Q50224 EXPRESSION TAG SEQADV 3ASD PRO A 223 UNP Q50224 EXPRESSION TAG SEQADV 3ASD ARG A 224 UNP Q50224 EXPRESSION TAG SEQADV 3ASD GLY A 225 UNP Q50224 EXPRESSION TAG SEQADV 3ASD SER A 226 UNP Q50224 EXPRESSION TAG SEQADV 3ASD SER A 227 UNP Q50224 EXPRESSION TAG SEQADV 3ASD ALA A 228 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 229 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 230 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 231 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 232 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 233 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 234 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 235 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 236 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 237 UNP Q50224 EXPRESSION TAG SEQADV 3ASD HIS A 238 UNP Q50224 EXPRESSION TAG SEQRES 1 A 200 MET GLY ASN ASP ASP ILE ARG GLN VAL TYR TYR GLU ASP SEQRES 2 A 200 LYS GLY ILE SER HIS ALA LYS ALA GLY ARG TYR SER GLN SEQRES 3 A 200 ALA VAL MET LEU LEU GLU GLN VAL TYR ASP ALA ASP ALA SEQRES 4 A 200 PHE ASP VAL ASP VAL ALA LEU HIS LEU GLY ILE ALA TYR SEQRES 5 A 200 VAL LYS THR GLY ALA VAL ASP ARG GLY THR GLU LEU LEU SEQRES 6 A 200 GLU ARG SER LEU ALA ASP ALA PRO ASP ASN VAL LYS VAL SEQRES 7 A 200 ALA THR VAL LEU GLY LEU THR TYR VAL GLN VAL GLN LYS SEQRES 8 A 200 TYR ASP LEU ALA VAL PRO LEU LEU ILE LYS VAL ALA GLU SEQRES 9 A 200 ALA ASN PRO ILE ASN PHE ASN VAL ARG PHE ARG LEU GLY SEQRES 10 A 200 VAL ALA LEU ASP ASN LEU GLY ARG PHE ASP GLU ALA ILE SEQRES 11 A 200 ASP SER PHE LYS ILE ALA LEU GLY LEU ARG PRO ASN GLU SEQRES 12 A 200 GLY LYS VAL HIS ARG ALA ILE ALA PHE SER TYR GLU GLN SEQRES 13 A 200 MET GLY ARG HIS GLU GLU ALA LEU PRO HIS PHE LYS LYS SEQRES 14 A 200 ALA ASN GLU LEU ASP GLU GLY ALA SER VAL GLU LEU ALA SEQRES 15 A 200 LEU VAL PRO ARG GLY SER SER ALA HIS HIS HIS HIS HIS SEQRES 16 A 200 HIS HIS HIS HIS HIS FORMUL 2 HOH *20(H2 O) HELIX 1 1 ASP A 79 GLY A 94 1 16 HELIX 2 2 ALA A 95 ALA A 108 1 14 HELIX 3 3 ASP A 112 VAL A 127 1 16 HELIX 4 4 LYS A 129 ASN A 144 1 16 HELIX 5 5 ASN A 147 GLY A 162 1 16 HELIX 6 6 ARG A 163 ARG A 178 1 16 HELIX 7 7 GLU A 181 MET A 195 1 15 HELIX 8 8 ARG A 197 LEU A 211 1 15 CISPEP 1 GLU A 213 GLY A 214 0 -3.42 CRYST1 43.649 43.649 207.449 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022910 0.000000 0.000000 0.00000 SCALE2 0.000000 0.022910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004820 0.00000