HEADER TRANSFERASE/TRANSFERASE INHIBITOR 06-MAR-11 3AVQ TITLE PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN TITLE 2 COMPLEX WITH N9-PAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PANTOTHENATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MTPANK, PANTOTHENIC ACID KINASE; COMPND 5 EC: 2.7.1.33; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 STRAIN: H37RV; SOURCE 5 GENE: COAA, RV1092C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-28A(+)(NOVAGEN) KEYWDS HOMODIMER, COA BIOSYNTHESIS, NUCLEOTIDE BINDING, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR B.CHETNANI,P.KUMAR,K.V.ABHINAV,M.CHHIBBER,A.SUROLIA,M.VIJAYAN REVDAT 3 01-NOV-23 3AVQ 1 REMARK SEQADV REVDAT 2 02-NOV-11 3AVQ 1 AUTHOR JRNL REVDAT 1 17-AUG-11 3AVQ 0 JRNL AUTH B.CHETNANI,P.KUMAR,K.V.ABHINAV,M.CHHIBBER,A.SUROLIA, JRNL AUTH 2 M.VIJAYAN JRNL TITL LOCATION AND CONFORMATION OF PANTOTHENATE AND ITS JRNL TITL 2 DERIVATIVES IN MYCOBACTERIUM TUBERCULOSIS PANTOTHENATE JRNL TITL 3 KINASE: INSIGHTS INTO ENZYME ACTION JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 67 774 2011 JRNL REFN ISSN 0907-4449 JRNL PMID 21904030 JRNL DOI 10.1107/S0907444911024462 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1041551.360 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 11542 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 577 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.011 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.15 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1502 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE : 0.3820 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 68 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.046 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2471 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 91 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.32000 REMARK 3 B22 (A**2) : 4.32000 REMARK 3 B33 (A**2) : -8.65000 REMARK 3 B12 (A**2) : 9.75000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM SIGMAA (A) : 0.42 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.57 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.050 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 6.080 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 9.420 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 8.700 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 12.510; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.34 REMARK 3 BSOL : 51.35 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : DRGCNS_MV1A_CIT_GOL.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DRGCNS_MV1A_CIT_GOL.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 3AVQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-MAR-11. REMARK 100 THE DEPOSITION ID IS D_1000029754. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : OSMIC MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11555 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.12700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.54400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 2GEV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.4-1.8M TRI SODIUM CITRATE, 0.05-0.1M REMARK 280 SODIUM ACETATE, 10% GLYCEROL, PH 6.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.34367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 60.68733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 60.68733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.34367 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 155.77200 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 89.93501 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 30.34367 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -9 REMARK 465 GLY A -8 REMARK 465 SER A -7 REMARK 465 SER A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ARG A 3 REMARK 465 LEU A 4 REMARK 465 SER A 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 69 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 84 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 238 CB ARG A 238 CG -0.181 REMARK 500 ARG A 238 C ARG A 238 O -0.129 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 21 -3.67 -55.31 REMARK 500 MET A 23 -118.64 60.85 REMARK 500 VAL A 52 -50.20 -130.25 REMARK 500 ARG A 69 -4.79 -58.55 REMARK 500 PRO A 81 -175.88 -59.77 REMARK 500 GLN A 83 156.11 -38.68 REMARK 500 ARG A 87 75.18 171.43 REMARK 500 PRO A 88 -147.44 -87.80 REMARK 500 ALA A 100 -0.52 70.18 REMARK 500 LEU A 113 -70.41 -62.86 REMARK 500 ASP A 118 -164.33 42.64 REMARK 500 HIS A 119 -132.14 39.20 REMARK 500 HIS A 120 37.32 -170.56 REMARK 500 PRO A 121 137.23 -29.51 REMARK 500 SER A 167 21.70 -79.84 REMARK 500 TYR A 171 137.67 -174.81 REMARK 500 HIS A 194 71.14 25.60 REMARK 500 PRO A 195 -174.32 -66.69 REMARK 500 THR A 245 -86.73 -112.90 REMARK 500 ILE A 276 -77.51 -121.86 REMARK 500 HIS A 302 -5.69 76.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MV1 A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FLC A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 318 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 321 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 322 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 323 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3AEZ RELATED DB: PDB REMARK 900 PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN REMARK 900 COMPLEX WITH GDP AND PHOSPHOPANTOTHENATE REMARK 900 RELATED ID: 3AF0 RELATED DB: PDB REMARK 900 PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN REMARK 900 COMPLEX WITH GDP AND PANTOTHENATE REMARK 900 RELATED ID: 3AF1 RELATED DB: PDB REMARK 900 PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN REMARK 900 COMPLEX WITH GDP REMARK 900 RELATED ID: 3AF2 RELATED DB: PDB REMARK 900 PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN REMARK 900 COMPLEX WITH AMPPCP REMARK 900 RELATED ID: 3AF3 RELATED DB: PDB REMARK 900 PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN REMARK 900 COMPLEX WITH GMPPCP AND PANTOTHENATE REMARK 900 RELATED ID: 3AF4 RELATED DB: PDB REMARK 900 PANTOTHENATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS (MTPANK) IN REMARK 900 COMPLEX WITH GMPPCP REMARK 900 RELATED ID: 3AVO RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH PANTOTHENATE REMARK 900 RELATED ID: 3AVP RELATED DB: PDB REMARK 900 SAME PROTEIN IN COMPLEX WITH PANTOTHENOL DBREF 3AVQ A 1 312 UNP P63810 COAA_MYCTU 1 312 SEQADV 3AVQ MET A -9 UNP P63810 EXPRESSION TAG SEQADV 3AVQ GLY A -8 UNP P63810 EXPRESSION TAG SEQADV 3AVQ SER A -7 UNP P63810 EXPRESSION TAG SEQADV 3AVQ SER A -6 UNP P63810 EXPRESSION TAG SEQADV 3AVQ HIS A -5 UNP P63810 EXPRESSION TAG SEQADV 3AVQ HIS A -4 UNP P63810 EXPRESSION TAG SEQADV 3AVQ HIS A -3 UNP P63810 EXPRESSION TAG SEQADV 3AVQ HIS A -2 UNP P63810 EXPRESSION TAG SEQADV 3AVQ HIS A -1 UNP P63810 EXPRESSION TAG SEQADV 3AVQ HIS A 0 UNP P63810 EXPRESSION TAG SEQRES 1 A 322 MET GLY SER SER HIS HIS HIS HIS HIS HIS MET SER ARG SEQRES 2 A 322 LEU SER GLU PRO SER PRO TYR VAL GLU PHE ASP ARG ARG SEQRES 3 A 322 GLN TRP ARG ALA LEU ARG MET SER THR PRO LEU ALA LEU SEQRES 4 A 322 THR GLU GLU GLU LEU VAL GLY LEU ARG GLY LEU GLY GLU SEQRES 5 A 322 GLN ILE ASP LEU LEU GLU VAL GLU GLU VAL TYR LEU PRO SEQRES 6 A 322 LEU ALA ARG LEU ILE HIS LEU GLN VAL ALA ALA ARG GLN SEQRES 7 A 322 ARG LEU PHE ALA ALA THR ALA GLU PHE LEU GLY GLU PRO SEQRES 8 A 322 GLN GLN ASN PRO ASP ARG PRO VAL PRO PHE ILE ILE GLY SEQRES 9 A 322 VAL ALA GLY SER VAL ALA VAL GLY LYS SER THR THR ALA SEQRES 10 A 322 ARG VAL LEU GLN ALA LEU LEU ALA ARG TRP ASP HIS HIS SEQRES 11 A 322 PRO ARG VAL ASP LEU VAL THR THR ASP GLY PHE LEU TYR SEQRES 12 A 322 PRO ASN ALA GLU LEU GLN ARG ARG ASN LEU MET HIS ARG SEQRES 13 A 322 LYS GLY PHE PRO GLU SER TYR ASN ARG ARG ALA LEU MET SEQRES 14 A 322 ARG PHE VAL THR SER VAL LYS SER GLY SER ASP TYR ALA SEQRES 15 A 322 CYS ALA PRO VAL TYR SER HIS LEU HIS TYR ASP ILE ILE SEQRES 16 A 322 PRO GLY ALA GLU GLN VAL VAL ARG HIS PRO ASP ILE LEU SEQRES 17 A 322 ILE LEU GLU GLY LEU ASN VAL LEU GLN THR GLY PRO THR SEQRES 18 A 322 LEU MET VAL SER ASP LEU PHE ASP PHE SER LEU TYR VAL SEQRES 19 A 322 ASP ALA ARG ILE GLU ASP ILE GLU GLN TRP TYR VAL SER SEQRES 20 A 322 ARG PHE LEU ALA MET ARG THR THR ALA PHE ALA ASP PRO SEQRES 21 A 322 GLU SER HIS PHE HIS HIS TYR ALA ALA PHE SER ASP SER SEQRES 22 A 322 GLN ALA VAL VAL ALA ALA ARG GLU ILE TRP ARG THR ILE SEQRES 23 A 322 ASN ARG PRO ASN LEU VAL GLU ASN ILE LEU PRO THR ARG SEQRES 24 A 322 PRO ARG ALA THR LEU VAL LEU ARG LYS ASP ALA ASP HIS SEQRES 25 A 322 SER ILE ASN ARG LEU ARG LEU ARG LYS LEU HET MV1 A 313 24 HET FLC A 314 13 HET GOL A 315 6 HET GOL A 316 6 HET GOL A 317 6 HET GOL A 318 6 HET GOL A 319 6 HET GOL A 320 6 HET GOL A 321 6 HET GOL A 322 6 HET GOL A 323 6 HETNAM MV1 (2S)-2,4-DIHYDROXY-3,3-DIMETHYL-N-[3-(NONYLAMINO)-3- HETNAM 2 MV1 OXOPROPYL]BUTANAMIDE HETNAM FLC CITRATE ANION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MV1 C18 H36 N2 O4 FORMUL 3 FLC C6 H5 O7 3- FORMUL 4 GOL 9(C3 H8 O3) FORMUL 13 HOH *191(H2 O) HELIX 1 1 ASP A 14 ARG A 19 1 6 HELIX 2 2 ALA A 20 MET A 23 5 4 HELIX 3 3 THR A 30 GLY A 36 1 7 HELIX 4 4 ASP A 45 VAL A 52 1 8 HELIX 5 5 VAL A 52 LEU A 78 1 27 HELIX 6 6 GLY A 102 ARG A 116 1 15 HELIX 7 7 ASP A 129 LEU A 132 5 4 HELIX 8 8 PRO A 134 ARG A 141 1 8 HELIX 9 9 PHE A 149 TYR A 153 5 5 HELIX 10 10 ASN A 154 SER A 167 1 14 HELIX 11 11 MET A 213 PHE A 218 5 6 HELIX 12 12 ARG A 227 MET A 242 1 16 HELIX 13 13 ARG A 243 THR A 245 5 3 HELIX 14 14 PHE A 254 PHE A 260 5 7 HELIX 15 15 SER A 261 ILE A 276 1 16 HELIX 16 16 ILE A 276 ASN A 284 1 9 HELIX 17 17 ILE A 285 ALA A 292 5 8 SHEET 1 A 7 TYR A 10 PHE A 13 0 SHEET 2 A 7 ILE A 304 ARG A 310 -1 O LEU A 309 N VAL A 11 SHEET 3 A 7 LEU A 294 LYS A 298 -1 N VAL A 295 O ARG A 308 SHEET 4 A 7 PHE A 220 ASP A 225 1 N ASP A 225 O LEU A 296 SHEET 5 A 7 PHE A 91 ALA A 96 1 N GLY A 94 O LEU A 222 SHEET 6 A 7 ILE A 197 GLU A 201 1 O LEU A 200 N ILE A 93 SHEET 7 A 7 VAL A 123 THR A 127 1 N VAL A 126 O ILE A 199 SHEET 1 B 2 ALA A 172 ALA A 174 0 SHEET 2 B 2 GLN A 190 VAL A 192 -1 O VAL A 192 N ALA A 172 SHEET 1 C 2 TYR A 177 SER A 178 0 SHEET 2 C 2 ASP A 183 ILE A 184 -1 O ASP A 183 N SER A 178 SITE 1 AC1 10 VAL A 99 ASP A 129 LYS A 147 HIS A 179 SITE 2 AC1 10 TYR A 182 TYR A 235 ARG A 238 PHE A 239 SITE 3 AC1 10 ILE A 272 ASN A 277 SITE 1 AC2 11 GLU A 42 VAL A 99 ALA A 100 VAL A 101 SITE 2 AC2 11 GLY A 102 LYS A 103 SER A 104 THR A 105 SITE 3 AC2 11 ARG A 108 ARG A 238 HOH A 500 SITE 1 AC3 2 GLY A 36 ARG A 38 SITE 1 AC4 4 TYR A 177 SER A 178 HIS A 179 LEU A 180 SITE 1 AC5 2 ALA A 157 CYS A 173 SITE 1 AC6 4 THR A 127 PRO A 175 GLN A 190 GOL A 323 SITE 1 AC7 5 ASP A 225 ARG A 297 ARG A 306 HOH A 478 SITE 2 AC7 5 HOH A 511 SITE 1 AC8 5 PHE A 218 SER A 221 ARG A 291 THR A 293 SITE 2 AC8 5 HOH A 513 SITE 1 AC9 3 ALA A 188 ALA A 248 HIS A 255 SITE 1 BC1 7 ARG A 15 GLN A 43 ILE A 44 ASP A 45 SITE 2 BC1 7 GLU A 48 ASP A 301 SER A 303 SITE 1 BC2 3 GLU A 189 GLN A 190 GOL A 318 CRYST1 103.848 103.848 91.031 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009629 0.005560 0.000000 0.00000 SCALE2 0.000000 0.011119 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010985 0.00000