HEADER ISOMERASE 03-JUN-11 3B05 TITLE CRYSTAL STRUCTURE OF SULFOLOBUS SHIBATAE ISOPENTENYL DIPHOSPHATE TITLE 2 ISOMERASE IN COMPLEX WITH REDUCED FMN AND IPP AT 2.2A RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: IPP ISOMERASE, ISOPENTENYL PYROPHOSPHATE ISOMERASE; COMPND 5 EC: 5.3.3.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SHIBATAE; SOURCE 3 ORGANISM_TAXID: 2286; SOURCE 4 GENE: FNI, IDI; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-15B KEYWDS TYPE 2, IDI, FMN, ISOPENTENYL DIPHOSPHATE ISOMERASE, IPP, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.UNNO,T.NAGAI,H.HEMMI REVDAT 3 13-MAR-24 3B05 1 REMARK LINK REVDAT 2 23-MAY-12 3B05 1 JRNL REVDAT 1 02-NOV-11 3B05 0 JRNL AUTH T.NAGAI,H.UNNO,M.W.JANCZAK,T.YOSHIMURA,C.D.POULTER,H.HEMMI JRNL TITL COVALENT MODIFICATION OF REDUCED FLAVIN MONONUCLEOTIDE IN JRNL TITL 2 TYPE-2 ISOPENTENYL DIPHOSPHATE ISOMERASE BY JRNL TITL 3 ACTIVE-SITE-DIRECTED INHIBITORS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 108 20461 2011 JRNL REFN ISSN 0027-8424 JRNL PMID 22158896 JRNL DOI 10.1073/PNAS.1115749108 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 83363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4398 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6121 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2540 REMARK 3 BIN FREE R VALUE SET COUNT : 322 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11232 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 184 REMARK 3 SOLVENT ATOMS : 467 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.205 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.890 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11604 ; 0.022 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15660 ; 1.945 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1452 ; 6.039 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 464 ;37.571 ;24.569 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2128 ;19.075 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 64 ;21.436 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1760 ; 0.164 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8376 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 7200 ; 0.830 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 11584 ; 1.595 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4404 ; 2.814 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4076 ; 4.734 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 5 A 360 1 REMARK 3 1 B 5 B 360 1 REMARK 3 1 C 5 C 360 1 REMARK 3 1 D 5 D 360 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2735 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 2735 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 2735 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 2735 ; 0.07 ; 0.05 REMARK 3 TIGHT THERMAL 1 A (A**2): 2735 ; 0.23 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 2735 ; 0.23 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 2735 ; 0.24 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 2735 ; 0.22 ; 0.50 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 669 A 669 1 REMARK 3 1 B 669 B 669 1 REMARK 3 1 C 669 C 669 1 REMARK 3 1 D 669 D 669 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 31 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 31 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 31 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 D (A): 31 ; 0.06 ; 0.05 REMARK 3 TIGHT THERMAL 2 A (A**2): 31 ; 0.24 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 31 ; 0.25 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 31 ; 0.36 ; 0.50 REMARK 3 TIGHT THERMAL 2 D (A**2): 31 ; 0.30 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3B05 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000029911. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-DEC-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 88214 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 22.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.39800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 400, 0.2M SODIUM CITRATE, 0.1M REMARK 280 TRIS-HCL, PH 8.0, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 166.53900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.80850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.80850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 249.80850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.80850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.80850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 83.26950 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.80850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.80850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 249.80850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.80850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.80850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 83.26950 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 166.53900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11920 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ARG A 367 REMARK 465 GLU A 368 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 ARG B 367 REMARK 465 GLU B 368 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 ARG C 367 REMARK 465 GLU C 368 REMARK 465 MET D 1 REMARK 465 PRO D 2 REMARK 465 ARG D 367 REMARK 465 GLU D 368 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 382 O HOH D 456 1.68 REMARK 500 O HOH C 435 O HOH C 466 2.01 REMARK 500 O HOH C 441 O HOH C 466 2.05 REMARK 500 O HOH D 391 O HOH D 424 2.13 REMARK 500 CB ASP A 142 O HOH A 453 2.16 REMARK 500 O HOH D 387 O HOH D 391 2.16 REMARK 500 O LYS A 366 O HOH A 463 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 161 CD GLU B 161 OE2 -0.083 REMARK 500 LEU C 131 CG LEU C 131 CD2 -0.225 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 74 CB - CG - CD1 ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG A 76 CD - NE - CZ ANGL. DEV. = 11.0 DEGREES REMARK 500 ARG A 76 NE - CZ - NH1 ANGL. DEV. = -7.2 DEGREES REMARK 500 ARG A 76 NE - CZ - NH2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 180 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 236 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 236 NE - CZ - NH2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ARG A 262 NE - CZ - NH1 ANGL. DEV. = -5.0 DEGREES REMARK 500 ARG A 262 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 LEU B 23 CB - CG - CD2 ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG B 98 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 GLU B 161 OE1 - CD - OE2 ANGL. DEV. = -14.4 DEGREES REMARK 500 ARG B 180 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG B 180 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 MET B 201 CA - CB - CG ANGL. DEV. = 11.7 DEGREES REMARK 500 ARG B 235 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG B 236 NE - CZ - NH1 ANGL. DEV. = -8.0 DEGREES REMARK 500 ARG B 236 NE - CZ - NH2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG B 262 NE - CZ - NH1 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 365 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG B 365 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG C 98 CD - NE - CZ ANGL. DEV. = 9.1 DEGREES REMARK 500 ARG C 98 NE - CZ - NH1 ANGL. DEV. = -7.8 DEGREES REMARK 500 ARG C 98 NE - CZ - NH2 ANGL. DEV. = 8.4 DEGREES REMARK 500 LEU C 131 CD1 - CG - CD2 ANGL. DEV. = -19.7 DEGREES REMARK 500 ARG C 180 NE - CZ - NH1 ANGL. DEV. = -6.3 DEGREES REMARK 500 ARG C 180 NE - CZ - NH2 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG C 236 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG C 236 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG C 262 NE - CZ - NH1 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG C 262 NE - CZ - NH2 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG D 180 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG D 236 CG - CD - NE ANGL. DEV. = -12.7 DEGREES REMARK 500 ARG D 236 NE - CZ - NH1 ANGL. DEV. = -7.1 DEGREES REMARK 500 ARG D 236 NE - CZ - NH2 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG D 262 NE - CZ - NH1 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG D 262 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG D 365 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 28 -2.13 71.41 REMARK 500 PHE A 54 -118.49 56.02 REMARK 500 MET A 67 -60.33 -135.62 REMARK 500 GLU A 148 54.70 35.88 REMARK 500 ASN A 157 44.58 -152.78 REMARK 500 SER A 195 53.63 -149.64 REMARK 500 SER A 218 63.22 39.85 REMARK 500 ALA A 296 -71.91 -129.50 REMARK 500 PHE B 54 -115.17 51.71 REMARK 500 MET B 67 -63.46 -141.83 REMARK 500 LYS B 133 35.39 -98.55 REMARK 500 GLU B 148 58.43 38.21 REMARK 500 SER B 195 58.56 -149.23 REMARK 500 SER B 218 61.73 30.63 REMARK 500 ALA B 296 -68.78 -128.54 REMARK 500 PHE C 54 -115.70 51.27 REMARK 500 MET C 67 -64.06 -141.05 REMARK 500 ASN C 157 43.15 -145.13 REMARK 500 SER C 195 54.94 -152.67 REMARK 500 SER C 218 60.19 32.36 REMARK 500 ALA C 296 -74.74 -133.23 REMARK 500 SER D 24 19.29 56.67 REMARK 500 PHE D 28 15.15 58.79 REMARK 500 PHE D 54 -119.84 51.51 REMARK 500 MET D 67 -59.84 -135.77 REMARK 500 SER D 195 54.58 -151.45 REMARK 500 SER D 218 63.56 39.12 REMARK 500 ALA D 296 -70.60 -131.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP D 3 ILE D 4 145.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 161 OE1 REMARK 620 2 HOH A 371 O 89.6 REMARK 620 3 HOH A 437 O 91.0 178.5 REMARK 620 4 IPE A 701 O1A 100.4 85.2 96.0 REMARK 620 5 IPE A 701 O2B 170.3 99.9 79.5 78.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 161 OE1 REMARK 620 2 GLU B 161 OE2 40.6 REMARK 620 3 IPE B 701 O1A 110.2 70.4 REMARK 620 4 IPE B 701 O2B 142.4 138.5 79.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 161 OE1 REMARK 620 2 HOH C 458 O 90.6 REMARK 620 3 HOH C 482 O 81.9 77.8 REMARK 620 4 IPE C 701 O1A 107.8 101.2 170.3 REMARK 620 5 IPE C 701 O2B 169.0 82.4 88.3 82.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 161 OE1 REMARK 620 2 HOH D 475 O 86.7 REMARK 620 3 HOH D 476 O 78.3 78.0 REMARK 620 4 HOH D 481 O 87.6 160.3 82.4 REMARK 620 5 IPE D 701 O1A 94.6 99.7 172.6 99.5 REMARK 620 6 IPE D 701 O2B 174.1 88.5 97.2 95.7 89.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR A 669 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPE A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR B 669 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPE B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR C 669 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPE C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FNR D 669 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE IPE D 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 1001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3B03 RELATED DB: PDB REMARK 900 RELATED ID: 3B04 RELATED DB: PDB REMARK 900 RELATED ID: 3B06 RELATED DB: PDB DBREF 3B05 A 1 368 UNP P61615 IDI2_SULSH 1 368 DBREF 3B05 B 1 368 UNP P61615 IDI2_SULSH 1 368 DBREF 3B05 C 1 368 UNP P61615 IDI2_SULSH 1 368 DBREF 3B05 D 1 368 UNP P61615 IDI2_SULSH 1 368 SEQRES 1 A 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 A 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 A 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 A 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 A 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 A 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 A 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 A 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 A 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 A 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 A 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 A 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 A 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 A 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 A 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 A 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 A 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 A 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 A 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 A 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 A 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 A 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 A 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 A 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 A 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 A 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 A 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 A 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 A 368 ARG LYS ARG GLU SEQRES 1 B 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 B 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 B 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 B 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 B 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 B 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 B 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 B 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 B 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 B 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 B 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 B 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 B 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 B 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 B 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 B 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 B 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 B 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 B 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 B 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 B 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 B 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 B 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 B 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 B 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 B 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 B 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 B 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 B 368 ARG LYS ARG GLU SEQRES 1 C 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 C 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 C 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 C 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 C 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 C 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 C 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 C 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 C 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 C 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 C 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 C 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 C 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 C 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 C 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 C 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 C 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 C 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 C 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 C 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 C 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 C 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 C 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 C 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 C 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 C 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 C 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 C 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 C 368 ARG LYS ARG GLU SEQRES 1 D 368 MET PRO ASP ILE VAL ASN ARG LYS VAL GLU HIS VAL GLU SEQRES 2 D 368 ILE ALA ALA PHE GLU ASN VAL ASP GLY LEU SER SER SER SEQRES 3 D 368 THR PHE LEU ASN ASP VAL ILE LEU VAL HIS GLN GLY PHE SEQRES 4 D 368 PRO GLY ILE SER PHE SER GLU ILE ASN THR LYS THR LYS SEQRES 5 D 368 PHE PHE ARG LYS GLU ILE SER VAL PRO VAL MET VAL THR SEQRES 6 D 368 GLY MET THR GLY GLY ARG ASN GLU LEU GLY ARG ILE ASN SEQRES 7 D 368 LYS ILE ILE ALA GLU VAL ALA GLU LYS PHE GLY ILE PRO SEQRES 8 D 368 MET GLY VAL GLY SER GLN ARG VAL ALA ILE GLU LYS ALA SEQRES 9 D 368 GLU ALA ARG GLU SER PHE ALA ILE VAL ARG LYS VAL ALA SEQRES 10 D 368 PRO THR ILE PRO ILE ILE ALA ASN LEU GLY MET PRO GLN SEQRES 11 D 368 LEU VAL LYS GLY TYR GLY LEU LYS GLU PHE GLN ASP ALA SEQRES 12 D 368 ILE GLN MET ILE GLU ALA ASP ALA ILE ALA VAL HIS LEU SEQRES 13 D 368 ASN PRO ALA GLN GLU VAL PHE GLN PRO GLU GLY GLU PRO SEQRES 14 D 368 GLU TYR GLN ILE TYR ALA LEU GLU LYS LEU ARG ASP ILE SEQRES 15 D 368 SER LYS GLU LEU SER VAL PRO ILE ILE VAL LYS GLU SER SEQRES 16 D 368 GLY ASN GLY ILE SER MET GLU THR ALA LYS LEU LEU TYR SEQRES 17 D 368 SER TYR GLY ILE LYS ASN PHE ASP THR SER GLY GLN GLY SEQRES 18 D 368 GLY THR ASN TRP ILE ALA ILE GLU MET ILE ARG ASP ILE SEQRES 19 D 368 ARG ARG GLY ASN TRP LYS ALA GLU SER ALA LYS ASN PHE SEQRES 20 D 368 LEU ASP TRP GLY VAL PRO THR ALA ALA SER ILE MET GLU SEQRES 21 D 368 VAL ARG TYR SER VAL PRO ASP SER PHE LEU VAL GLY SER SEQRES 22 D 368 GLY GLY ILE ARG SER GLY LEU ASP ALA ALA LYS ALA ILE SEQRES 23 D 368 ALA LEU GLY ALA ASP ILE ALA GLY MET ALA LEU PRO VAL SEQRES 24 D 368 LEU LYS SER ALA ILE GLU GLY LYS GLU SER LEU GLU GLN SEQRES 25 D 368 PHE PHE ARG LYS ILE ILE PHE GLU LEU LYS ALA ALA MET SEQRES 26 D 368 MET LEU THR GLY SER LYS ASP VAL ASP ALA LEU LYS LYS SEQRES 27 D 368 THR SER ILE VAL ILE LEU GLY LYS LEU LYS GLU TRP ALA SEQRES 28 D 368 GLU TYR ARG GLY ILE ASN LEU SER ILE TYR GLU LYS VAL SEQRES 29 D 368 ARG LYS ARG GLU HET FNR A 669 31 HET IPE A 701 14 HET MG A1001 1 HET FNR B 669 31 HET IPE B 701 14 HET MG B1001 1 HET FNR C 669 31 HET IPE C 701 14 HET MG C1001 1 HET FNR D 669 31 HET IPE D 701 14 HET MG D1001 1 HETNAM FNR 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H- HETNAM 2 FNR BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D- HETNAM 3 FNR RIBITOL HETNAM IPE 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE HETNAM MG MAGNESIUM ION HETSYN FNR TWO ELECTRON REDUCED FLAVIN MONONUCLEOTIDE HETSYN IPE ISOPENTENYL PYROPHOSPHATE FORMUL 5 FNR 4(C17 H23 N4 O9 P) FORMUL 6 IPE 4(C5 H12 O7 P2) FORMUL 7 MG 4(MG 2+) FORMUL 17 HOH *467(H2 O) HELIX 1 1 ASP A 3 GLU A 18 1 16 HELIX 2 2 PHE A 28 ASN A 30 5 3 HELIX 3 3 SER A 43 ILE A 47 5 5 HELIX 4 4 ARG A 71 GLY A 89 1 19 HELIX 5 5 GLN A 97 LYS A 103 1 7 HELIX 6 6 ALA A 104 ALA A 106 5 3 HELIX 7 7 ARG A 107 ALA A 117 1 11 HELIX 8 8 MET A 128 LYS A 133 1 6 HELIX 9 9 GLY A 136 MET A 146 1 11 HELIX 10 10 ASN A 157 GLN A 164 1 8 HELIX 11 11 ILE A 173 LYS A 184 1 12 HELIX 12 12 SER A 200 TYR A 210 1 11 HELIX 13 13 ASN A 224 GLY A 237 1 14 HELIX 14 14 TRP A 239 PHE A 247 1 9 HELIX 15 15 PRO A 253 VAL A 265 1 13 HELIX 16 16 SER A 278 GLY A 289 1 12 HELIX 17 17 ALA A 296 GLY A 306 1 11 HELIX 18 18 GLY A 306 LEU A 327 1 22 HELIX 19 19 ASP A 332 LYS A 338 1 7 HELIX 20 20 LEU A 344 ARG A 354 1 11 HELIX 21 21 ASN A 357 LYS A 366 1 10 HELIX 22 22 ASP B 3 GLU B 18 1 16 HELIX 23 23 PHE B 28 ASN B 30 5 3 HELIX 24 24 SER B 43 ILE B 47 5 5 HELIX 25 25 ARG B 71 GLY B 89 1 19 HELIX 26 26 GLN B 97 LYS B 103 1 7 HELIX 27 27 ALA B 104 ALA B 106 5 3 HELIX 28 28 ARG B 107 ALA B 117 1 11 HELIX 29 29 MET B 128 LYS B 133 1 6 HELIX 30 30 GLY B 136 MET B 146 1 11 HELIX 31 31 ASN B 157 GLN B 164 1 8 HELIX 32 32 ILE B 173 LEU B 186 1 14 HELIX 33 33 SER B 200 TYR B 210 1 11 HELIX 34 34 ASN B 224 ARG B 236 1 13 HELIX 35 35 TRP B 239 PHE B 247 1 9 HELIX 36 36 PRO B 253 VAL B 265 1 13 HELIX 37 37 SER B 278 GLY B 289 1 12 HELIX 38 38 ALA B 296 GLY B 306 1 11 HELIX 39 39 GLY B 306 THR B 328 1 23 HELIX 40 40 ASP B 332 LYS B 338 1 7 HELIX 41 41 LEU B 344 ARG B 354 1 11 HELIX 42 42 ASN B 357 LYS B 366 1 10 HELIX 43 43 ASP C 3 GLU C 18 1 16 HELIX 44 44 PHE C 28 ASN C 30 5 3 HELIX 45 45 SER C 43 ILE C 47 5 5 HELIX 46 46 ARG C 71 GLY C 89 1 19 HELIX 47 47 GLN C 97 LYS C 103 1 7 HELIX 48 48 ALA C 104 ALA C 106 5 3 HELIX 49 49 ARG C 107 ALA C 117 1 11 HELIX 50 50 MET C 128 LYS C 133 1 6 HELIX 51 51 GLY C 136 MET C 146 1 11 HELIX 52 52 ASN C 157 GLN C 164 1 8 HELIX 53 53 ILE C 173 LEU C 186 1 14 HELIX 54 54 SER C 200 TYR C 210 1 11 HELIX 55 55 ASN C 224 ARG C 236 1 13 HELIX 56 56 TRP C 239 PHE C 247 1 9 HELIX 57 57 PRO C 253 VAL C 265 1 13 HELIX 58 58 SER C 278 GLY C 289 1 12 HELIX 59 59 ALA C 296 GLY C 306 1 11 HELIX 60 60 GLY C 306 LEU C 327 1 22 HELIX 61 61 ASP C 332 LYS C 338 1 7 HELIX 62 62 LEU C 344 ARG C 354 1 11 HELIX 63 63 ASN C 357 LYS C 366 1 10 HELIX 64 64 ASP D 3 GLU D 18 1 16 HELIX 65 65 PHE D 28 ASN D 30 5 3 HELIX 66 66 SER D 43 ILE D 47 5 5 HELIX 67 67 ARG D 71 GLY D 89 1 19 HELIX 68 68 GLN D 97 LYS D 103 1 7 HELIX 69 69 ALA D 106 ALA D 117 1 12 HELIX 70 70 MET D 128 LYS D 133 1 6 HELIX 71 71 GLY D 136 MET D 146 1 11 HELIX 72 72 ASN D 157 GLN D 164 1 8 HELIX 73 73 ILE D 173 LEU D 186 1 14 HELIX 74 74 SER D 200 TYR D 210 1 11 HELIX 75 75 ASN D 224 GLY D 237 1 14 HELIX 76 76 TRP D 239 PHE D 247 1 9 HELIX 77 77 PRO D 253 VAL D 265 1 13 HELIX 78 78 SER D 278 LEU D 288 1 11 HELIX 79 79 ALA D 296 GLY D 306 1 11 HELIX 80 80 GLY D 306 THR D 328 1 23 HELIX 81 81 ASP D 332 LYS D 338 1 7 HELIX 82 82 LEU D 344 ARG D 354 1 11 HELIX 83 83 ASN D 357 LYS D 366 1 10 SHEET 1 A 2 VAL A 32 LEU A 34 0 SHEET 2 A 2 ILE A 341 ILE A 343 -1 O VAL A 342 N ILE A 33 SHEET 1 B 2 THR A 51 PHE A 53 0 SHEET 2 B 2 LYS A 56 ILE A 58 -1 O ILE A 58 N THR A 51 SHEET 1 C 9 VAL A 62 VAL A 64 0 SHEET 2 C 9 MET A 92 GLY A 93 1 O GLY A 93 N VAL A 64 SHEET 3 C 9 ILE A 122 GLY A 127 1 O ILE A 123 N MET A 92 SHEET 4 C 9 ALA A 151 HIS A 155 1 O ALA A 153 N ALA A 124 SHEET 5 C 9 ILE A 190 LYS A 193 1 O ILE A 191 N VAL A 154 SHEET 6 C 9 ASN A 214 ASP A 216 1 O ASN A 214 N VAL A 192 SHEET 7 C 9 PHE A 269 SER A 273 1 O VAL A 271 N PHE A 215 SHEET 8 C 9 ILE A 292 MET A 295 1 O ILE A 292 N GLY A 272 SHEET 9 C 9 VAL A 62 VAL A 64 1 N MET A 63 O ALA A 293 SHEET 1 D 2 VAL B 32 LEU B 34 0 SHEET 2 D 2 ILE B 341 ILE B 343 -1 O VAL B 342 N ILE B 33 SHEET 1 E 2 THR B 51 PHE B 53 0 SHEET 2 E 2 LYS B 56 ILE B 58 -1 O ILE B 58 N THR B 51 SHEET 1 F 9 VAL B 62 VAL B 64 0 SHEET 2 F 9 MET B 92 GLY B 93 1 O GLY B 93 N VAL B 64 SHEET 3 F 9 ILE B 122 GLY B 127 1 O ILE B 123 N MET B 92 SHEET 4 F 9 ALA B 151 HIS B 155 1 O ALA B 153 N ALA B 124 SHEET 5 F 9 ILE B 190 LYS B 193 1 O ILE B 191 N VAL B 154 SHEET 6 F 9 ASN B 214 ASP B 216 1 O ASN B 214 N VAL B 192 SHEET 7 F 9 PHE B 269 SER B 273 1 O VAL B 271 N PHE B 215 SHEET 8 F 9 ILE B 292 MET B 295 1 O ILE B 292 N GLY B 272 SHEET 9 F 9 VAL B 62 VAL B 64 1 N MET B 63 O ALA B 293 SHEET 1 G 2 VAL C 32 LEU C 34 0 SHEET 2 G 2 ILE C 341 ILE C 343 -1 O VAL C 342 N ILE C 33 SHEET 1 H 2 THR C 51 PHE C 53 0 SHEET 2 H 2 LYS C 56 ILE C 58 -1 O ILE C 58 N THR C 51 SHEET 1 I 9 VAL C 62 VAL C 64 0 SHEET 2 I 9 MET C 92 GLY C 93 1 O GLY C 93 N VAL C 64 SHEET 3 I 9 ILE C 122 GLY C 127 1 O ILE C 123 N MET C 92 SHEET 4 I 9 ALA C 151 HIS C 155 1 O ALA C 153 N ALA C 124 SHEET 5 I 9 ILE C 190 LYS C 193 1 O ILE C 191 N VAL C 154 SHEET 6 I 9 ASN C 214 ASP C 216 1 O ASN C 214 N VAL C 192 SHEET 7 I 9 PHE C 269 SER C 273 1 O VAL C 271 N PHE C 215 SHEET 8 I 9 ILE C 292 MET C 295 1 O ILE C 292 N GLY C 272 SHEET 9 I 9 VAL C 62 VAL C 64 1 N MET C 63 O ALA C 293 SHEET 1 J 2 VAL D 32 LEU D 34 0 SHEET 2 J 2 ILE D 341 ILE D 343 -1 O VAL D 342 N ILE D 33 SHEET 1 K 2 THR D 51 PHE D 53 0 SHEET 2 K 2 LYS D 56 ILE D 58 -1 O ILE D 58 N THR D 51 SHEET 1 L 9 VAL D 62 VAL D 64 0 SHEET 2 L 9 MET D 92 GLY D 93 1 O GLY D 93 N VAL D 64 SHEET 3 L 9 ILE D 122 GLY D 127 1 O ILE D 123 N MET D 92 SHEET 4 L 9 ALA D 151 HIS D 155 1 O ALA D 153 N ALA D 124 SHEET 5 L 9 ILE D 190 LYS D 193 1 O ILE D 191 N VAL D 154 SHEET 6 L 9 ASN D 214 ASP D 216 1 O ASN D 214 N VAL D 192 SHEET 7 L 9 PHE D 269 GLY D 272 1 O VAL D 271 N PHE D 215 SHEET 8 L 9 ILE D 292 MET D 295 1 O ILE D 292 N GLY D 272 SHEET 9 L 9 VAL D 62 VAL D 64 1 N MET D 63 O MET D 295 LINK OE1 GLU A 161 MG MG A1001 1555 1555 2.08 LINK O HOH A 371 MG MG A1001 1555 1555 2.22 LINK O HOH A 437 MG MG A1001 1555 1555 2.13 LINK O1A IPE A 701 MG MG A1001 1555 1555 2.02 LINK O2B IPE A 701 MG MG A1001 1555 1555 2.34 LINK OE1 GLU B 161 MG MG B1001 1555 1555 2.74 LINK OE2 GLU B 161 MG MG B1001 1555 1555 2.79 LINK O1A IPE B 701 MG MG B1001 1555 1555 2.08 LINK O2B IPE B 701 MG MG B1001 1555 1555 2.26 LINK OE1 GLU C 161 MG MG C1001 1555 1555 2.01 LINK O HOH C 458 MG MG C1001 1555 1555 2.17 LINK O HOH C 482 MG MG C1001 1555 1555 2.15 LINK O1A IPE C 701 MG MG C1001 1555 1555 2.06 LINK O2B IPE C 701 MG MG C1001 1555 1555 2.14 LINK OE1 GLU D 161 MG MG D1001 1555 1555 2.31 LINK O HOH D 475 MG MG D1001 1555 1555 2.14 LINK O HOH D 476 MG MG D1001 1555 1555 2.04 LINK O HOH D 481 MG MG D1001 1555 1555 2.08 LINK O1A IPE D 701 MG MG D1001 1555 1555 1.91 LINK O2B IPE D 701 MG MG D1001 1555 1555 2.04 SITE 1 AC1 23 THR A 65 GLY A 66 MET A 67 GLY A 95 SITE 2 AC1 23 SER A 96 ASN A 125 HIS A 155 LYS A 193 SITE 3 AC1 23 SER A 218 GLY A 222 THR A 223 TRP A 225 SITE 4 AC1 23 GLY A 274 GLY A 275 ARG A 277 MET A 295 SITE 5 AC1 23 ALA A 296 LEU A 297 HOH A 374 HOH A 401 SITE 6 AC1 23 HOH A 457 HOH A 479 IPE A 701 SITE 1 AC2 16 ARG A 7 LYS A 8 HIS A 11 SER A 96 SITE 2 AC2 16 ARG A 98 HIS A 155 ASN A 157 GLN A 160 SITE 3 AC2 16 GLU A 161 GLN A 164 TRP A 225 HOH A 371 SITE 4 AC2 16 HOH A 437 HOH A 467 FNR A 669 MG A1001 SITE 1 AC3 4 GLU A 161 HOH A 371 HOH A 437 IPE A 701 SITE 1 AC4 22 THR B 65 GLY B 66 MET B 67 GLY B 95 SITE 2 AC4 22 SER B 96 ASN B 125 HIS B 155 LYS B 193 SITE 3 AC4 22 SER B 218 GLY B 222 THR B 223 TRP B 225 SITE 4 AC4 22 GLY B 274 GLY B 275 ARG B 277 ALA B 296 SITE 5 AC4 22 LEU B 297 HOH B 370 HOH B 380 HOH B 384 SITE 6 AC4 22 HOH B 469 IPE B 701 SITE 1 AC5 15 ILE B 4 ARG B 7 LYS B 8 HIS B 11 SITE 2 AC5 15 SER B 96 ARG B 98 HIS B 155 ASN B 157 SITE 3 AC5 15 GLN B 160 GLU B 161 GLN B 164 TRP B 225 SITE 4 AC5 15 HOH B 446 FNR B 669 MG B1001 SITE 1 AC6 2 GLU B 161 IPE B 701 SITE 1 AC7 22 THR C 65 GLY C 66 MET C 67 GLY C 95 SITE 2 AC7 22 SER C 96 ASN C 125 HIS C 155 LYS C 193 SITE 3 AC7 22 SER C 218 GLY C 222 THR C 223 TRP C 225 SITE 4 AC7 22 GLY C 274 GLY C 275 ARG C 277 ALA C 296 SITE 5 AC7 22 LEU C 297 HOH C 369 HOH C 370 HOH C 399 SITE 6 AC7 22 HOH C 446 IPE C 701 SITE 1 AC8 18 ARG C 7 LYS C 8 HIS C 11 SER C 96 SITE 2 AC8 18 ARG C 98 HIS C 155 ASN C 157 GLN C 160 SITE 3 AC8 18 GLU C 161 GLN C 164 SER C 195 TRP C 225 SITE 4 AC8 18 HOH C 455 HOH C 458 HOH C 474 HOH C 482 SITE 5 AC8 18 FNR C 669 MG C1001 SITE 1 AC9 4 GLU C 161 HOH C 458 HOH C 482 IPE C 701 SITE 1 BC1 22 THR D 65 GLY D 66 MET D 67 GLY D 95 SITE 2 BC1 22 SER D 96 ASN D 125 HIS D 155 LYS D 193 SITE 3 BC1 22 SER D 218 GLY D 222 THR D 223 TRP D 225 SITE 4 BC1 22 GLY D 275 ARG D 277 ALA D 296 LEU D 297 SITE 5 BC1 22 LEU D 300 HOH D 370 HOH D 371 HOH D 379 SITE 6 BC1 22 HOH D 450 IPE D 701 SITE 1 BC2 19 ILE D 4 ARG D 7 LYS D 8 HIS D 11 SITE 2 BC2 19 SER D 96 ARG D 98 HIS D 155 ASN D 157 SITE 3 BC2 19 GLN D 160 GLU D 161 GLN D 164 TRP D 225 SITE 4 BC2 19 HOH D 429 HOH D 474 HOH D 475 HOH D 476 SITE 5 BC2 19 HOH D 481 FNR D 669 MG D1001 SITE 1 BC3 6 ARG D 98 GLU D 161 HOH D 475 HOH D 476 SITE 2 BC3 6 HOH D 481 IPE D 701 CRYST1 101.617 101.617 333.078 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009841 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009841 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003002 0.00000