HEADER DNA BINDING PROTEIN 08-JUN-11 3B0C TITLE CRYSTAL STRUCTURE OF THE CHICKEN CENP-T HISTONE FOLD/CENP-W COMPLEX, TITLE 2 CRYSTAL FORM I COMPND MOL_ID: 1; COMPND 2 MOLECULE: CENTROMERE PROTEIN T; COMPND 3 CHAIN: T; COMPND 4 SYNONYM: CENP-T; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CENTROMERE PROTEIN W; COMPND 8 CHAIN: W; COMPND 9 SYNONYM: CENP-W; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKENS; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: CENPT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PRSFDUET; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 13 ORGANISM_TAXID: 9031; SOURCE 14 GENE: CENP-W; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PRSFDUET KEYWDS HISTONE FOLD, DNA BINDING, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.NISHINO,K.TAKEUCHI,K.E.GASCOIGNE,A.SUZUKI,T.HORI,T.OYAMA, AUTHOR 2 K.MORIKAWA,I.M.CHEESEMAN,T.FUKAGAWA REVDAT 2 13-MAR-24 3B0C 1 REMARK SEQADV REVDAT 1 07-MAR-12 3B0C 0 JRNL AUTH T.NISHINO,K.TAKEUCHI,K.E.GASCOIGNE,A.SUZUKI,T.HORI,T.OYAMA, JRNL AUTH 2 K.MORIKAWA,I.M.CHEESEMAN,T.FUKAGAWA JRNL TITL CENP-T-W-S-X FORMS A UNIQUE CENTROMERIC CHROMATIN STRUCTURE JRNL TITL 2 WITH A HISTONE-LIKE FOLD. JRNL REF CELL(CAMBRIDGE,MASS.) V. 148 487 2012 JRNL REFN ISSN 0092-8674 JRNL PMID 22304917 JRNL DOI 10.1016/J.CELL.2011.11.061 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.1_743) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.060 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 10721 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 18.710 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.9826 - 5.2957 0.97 712 167 0.2191 0.2720 REMARK 3 2 5.2957 - 4.2067 1.00 681 158 0.1724 0.2078 REMARK 3 3 4.2067 - 3.6759 1.00 673 153 0.2003 0.2320 REMARK 3 4 3.6759 - 3.3403 1.00 675 155 0.2260 0.2709 REMARK 3 5 3.3403 - 3.1011 0.99 648 144 0.2336 0.2659 REMARK 3 6 3.1011 - 2.9184 0.95 617 147 0.2591 0.2795 REMARK 3 7 2.9184 - 2.7723 0.93 621 141 0.2425 0.3373 REMARK 3 8 2.7723 - 2.6517 0.93 602 144 0.2275 0.2971 REMARK 3 9 2.6517 - 2.5497 0.91 599 142 0.2455 0.2824 REMARK 3 10 2.5497 - 2.4617 0.90 582 134 0.2592 0.3690 REMARK 3 11 2.4617 - 2.3848 0.90 569 131 0.2504 0.3299 REMARK 3 12 2.3848 - 2.3167 0.89 583 137 0.2685 0.3333 REMARK 3 13 2.3167 - 2.2557 0.88 580 130 0.2611 0.3780 REMARK 3 14 2.2557 - 2.2007 0.89 573 123 0.2721 0.3512 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.83 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 64.06 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.820 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.06380 REMARK 3 B22 (A**2) : 4.06380 REMARK 3 B33 (A**2) : -8.12750 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1397 REMARK 3 ANGLE : 1.358 1880 REMARK 3 CHIRALITY : 0.085 214 REMARK 3 PLANARITY : 0.008 234 REMARK 3 DIHEDRAL : 19.355 548 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN T AND (RESSEQ 8:19) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2737 -10.6120 -27.1603 REMARK 3 T TENSOR REMARK 3 T11: 0.7290 T22: 0.4230 REMARK 3 T33: 0.3733 T12: 0.2565 REMARK 3 T13: 0.0707 T23: 0.0784 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0053 REMARK 3 L33: 0.0010 L12: 0.0002 REMARK 3 L13: -0.0005 L23: 0.0022 REMARK 3 S TENSOR REMARK 3 S11: 0.0070 S12: 0.0215 S13: 0.0010 REMARK 3 S21: -0.0168 S22: 0.0246 S23: 0.0077 REMARK 3 S31: 0.0552 S32: 0.0571 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN T AND (RESSEQ 20:52) REMARK 3 ORIGIN FOR THE GROUP (A): -19.3351 -3.5388 -22.3878 REMARK 3 T TENSOR REMARK 3 T11: 0.6982 T22: 0.1955 REMARK 3 T33: 0.1962 T12: 0.5427 REMARK 3 T13: -0.0821 T23: 0.0602 REMARK 3 L TENSOR REMARK 3 L11: 0.0096 L22: 0.0534 REMARK 3 L33: 0.0320 L12: -0.0350 REMARK 3 L13: 0.0014 L23: -0.0298 REMARK 3 S TENSOR REMARK 3 S11: -0.1010 S12: 0.0264 S13: 0.0919 REMARK 3 S21: -0.1418 S22: -0.0560 S23: -0.1245 REMARK 3 S31: -0.0068 S32: 0.0097 S33: -0.1613 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN T AND (RESSEQ 53:69) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0721 -5.7840 -4.6999 REMARK 3 T TENSOR REMARK 3 T11: 0.5656 T22: 0.4129 REMARK 3 T33: 0.3827 T12: 0.2511 REMARK 3 T13: -0.1191 T23: -0.0549 REMARK 3 L TENSOR REMARK 3 L11: 0.0864 L22: 0.0022 REMARK 3 L33: 0.0717 L12: -0.0160 REMARK 3 L13: -0.0781 L23: 0.0129 REMARK 3 S TENSOR REMARK 3 S11: -0.1480 S12: -0.0735 S13: -0.0654 REMARK 3 S21: 0.0425 S22: -0.0964 S23: 0.0054 REMARK 3 S31: -0.0065 S32: -0.0221 S33: -0.0089 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN T AND (RESSEQ 70:78) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0564 -19.4831 -10.3877 REMARK 3 T TENSOR REMARK 3 T11: 0.5047 T22: 0.3596 REMARK 3 T33: 0.4520 T12: 0.1539 REMARK 3 T13: 0.0167 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.0016 L22: 0.0055 REMARK 3 L33: 0.0009 L12: -0.0014 REMARK 3 L13: 0.0011 L23: 0.0007 REMARK 3 S TENSOR REMARK 3 S11: -0.0653 S12: -0.0037 S13: -0.0084 REMARK 3 S21: 0.0082 S22: -0.0667 S23: 0.0522 REMARK 3 S31: 0.0196 S32: -0.0311 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN T AND (RESSEQ 79:98) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3993 -15.9421 -8.5280 REMARK 3 T TENSOR REMARK 3 T11: 0.3199 T22: 0.3443 REMARK 3 T33: 0.4924 T12: 0.1689 REMARK 3 T13: -0.0349 T23: 0.0943 REMARK 3 L TENSOR REMARK 3 L11: 0.0334 L22: 0.0274 REMARK 3 L33: 0.0136 L12: 0.0155 REMARK 3 L13: -0.0094 L23: 0.0088 REMARK 3 S TENSOR REMARK 3 S11: 0.0136 S12: -0.0307 S13: -0.0266 REMARK 3 S21: 0.0162 S22: -0.0257 S23: -0.0524 REMARK 3 S31: 0.0172 S32: 0.0165 S33: -0.0069 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN W AND (RESSEQ 4:26) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1896 2.5670 -11.9205 REMARK 3 T TENSOR REMARK 3 T11: 0.7045 T22: 0.2907 REMARK 3 T33: 0.6154 T12: 0.1632 REMARK 3 T13: -0.2315 T23: -0.0959 REMARK 3 L TENSOR REMARK 3 L11: 0.0226 L22: 0.0175 REMARK 3 L33: 0.0542 L12: 0.0075 REMARK 3 L13: -0.0155 L23: -0.0328 REMARK 3 S TENSOR REMARK 3 S11: -0.0322 S12: -0.0734 S13: 0.0009 REMARK 3 S21: 0.0616 S22: 0.0156 S23: -0.1738 REMARK 3 S31: 0.0315 S32: 0.0652 S33: -0.0037 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN W AND (RESSEQ 27:76) REMARK 3 ORIGIN FOR THE GROUP (A): -20.2238 -12.6052 -26.8384 REMARK 3 T TENSOR REMARK 3 T11: 0.6086 T22: 0.1367 REMARK 3 T33: 0.2839 T12: 0.4615 REMARK 3 T13: -0.1519 T23: 0.0626 REMARK 3 L TENSOR REMARK 3 L11: 0.0038 L22: 0.0052 REMARK 3 L33: 0.0178 L12: -0.0073 REMARK 3 L13: 0.0187 L23: -0.0074 REMARK 3 S TENSOR REMARK 3 S11: 0.0806 S12: 0.0719 S13: 0.0631 REMARK 3 S21: -0.2617 S22: -0.1346 S23: -0.0349 REMARK 3 S31: 0.0056 S32: -0.0043 S33: -0.0708 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3B0C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 16-JUN-11. REMARK 100 THE DEPOSITION ID IS D_1000029918. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-10; 24-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SPRING-8; SPRING-8 REMARK 200 BEAMLINE : BL38B1; BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1; 0.96423, 0.97946, 0.97899 REMARK 200 MONOCHROMATOR : GRAPHITE; GRAPHITE REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10722 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM CITRATE-NAOH PH 5.0, 30% PEG REMARK 280 600, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.64200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.82100 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.82100 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 81.64200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, W REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY T -1 REMARK 465 SER T 0 REMARK 465 THR T 1 REMARK 465 ARG T 2 REMARK 465 GLU T 3 REMARK 465 PRO T 4 REMARK 465 GLU T 5 REMARK 465 ILE T 6 REMARK 465 ALA T 7 REMARK 465 ALA T 99 REMARK 465 VAL T 100 REMARK 465 SER T 101 REMARK 465 GLY T 102 REMARK 465 ASN T 103 REMARK 465 LYS T 104 REMARK 465 VAL T 105 REMARK 465 ILE T 106 REMARK 465 PRO T 107 REMARK 465 CYS T 108 REMARK 465 LYS T 109 REMARK 465 GLY W 1 REMARK 465 ARG W 2 REMARK 465 ARG W 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL W 5 138.85 -170.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT T 110 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT T 111 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT W 77 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3B0B RELATED DB: PDB REMARK 900 RELATED ID: 3B0D RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 SEQUENCE DATABASE REFERENCE FOR THE CHAIN W DOES NOT CURRENTLY REMARK 999 EXIST. DBREF 3B0C T 1 109 UNP F1NPG5 F1NPG5_CHICK 54 162 DBREF 3B0C W 1 76 PDB 3B0C 3B0C 1 76 SEQADV 3B0C GLY T -1 UNP F1NPG5 EXPRESSION TAG SEQADV 3B0C SER T 0 UNP F1NPG5 EXPRESSION TAG SEQRES 1 T 111 GLY SER THR ARG GLU PRO GLU ILE ALA SER SER LEU ILE SEQRES 2 T 111 LYS GLN ILE PHE SER HIS TYR VAL LYS THR PRO VAL THR SEQRES 3 T 111 ARG ASP ALA TYR LYS ILE VAL GLU LYS CYS SER GLU ARG SEQRES 4 T 111 TYR PHE LYS GLN ILE SER SER ASP LEU GLU ALA TYR SER SEQRES 5 T 111 GLN HIS ALA GLY ARG LYS THR VAL GLU MET ALA ASP VAL SEQRES 6 T 111 GLU LEU LEU MET ARG ARG GLN GLY LEU VAL THR ASP LYS SEQRES 7 T 111 MET PRO LEU HIS VAL LEU VAL GLU ARG HIS LEU PRO LEU SEQRES 8 T 111 GLU TYR ARG LYS LEU LEU ILE PRO ILE ALA VAL SER GLY SEQRES 9 T 111 ASN LYS VAL ILE PRO CYS LYS SEQRES 1 W 76 GLY ARG ARG THR VAL PRO ARG GLY THR LEU ARG LYS ILE SEQRES 2 W 76 ILE LYS LYS HIS LYS PRO HIS LEU ARG LEU ALA ALA ASN SEQRES 3 W 76 THR ASP LEU LEU VAL HIS LEU SER PHE LEU LEU PHE LEU SEQRES 4 W 76 HIS ARG LEU ALA GLU GLU ALA ARG THR ASN ALA PHE GLU SEQRES 5 W 76 ASN LYS SER LYS ILE ILE LYS PRO GLU HIS THR ILE ALA SEQRES 6 W 76 ALA ALA LYS VAL ILE LEU LYS LYS SER ARG GLY HET CIT T 110 13 HET CIT T 111 13 HET CIT W 77 13 HETNAM CIT CITRIC ACID FORMUL 3 CIT 3(C6 H8 O7) FORMUL 6 HOH *52(H2 O) HELIX 1 1 SER T 8 LYS T 20 1 13 HELIX 2 2 THR T 24 ALA T 53 1 30 HELIX 3 3 GLU T 59 GLN T 70 1 12 HELIX 4 4 PRO T 78 LEU T 87 1 10 HELIX 5 5 PRO T 88 ILE T 96 1 9 HELIX 6 6 PRO W 6 LYS W 18 1 13 HELIX 7 7 ASN W 26 ASN W 53 1 28 HELIX 8 8 LYS W 59 ARG W 75 1 17 SHEET 1 A 2 THR T 57 VAL T 58 0 SHEET 2 A 2 ARG W 22 LEU W 23 1 O ARG W 22 N VAL T 58 SITE 1 AC1 5 HIS T 17 TYR T 18 ARG T 37 HIS T 86 SITE 2 AC1 5 ARG W 75 SITE 1 AC2 6 ILE T 30 LYS T 33 PRO T 78 HIS T 80 SITE 2 AC2 6 VAL T 81 HOH T 123 SITE 1 AC3 12 ARG T 37 LYS T 40 MET T 77 LEU T 82 SITE 2 AC3 12 ARG T 85 HIS T 86 LEU W 37 HIS W 40 SITE 3 AC3 12 ARG W 41 HOH W 85 HOH W 91 HOH W 96 CRYST1 54.933 54.933 122.463 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018204 0.010510 0.000000 0.00000 SCALE2 0.000000 0.021020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008166 0.00000