HEADER HYDROLASE 24-OCT-07 3B4R TITLE SITE-2 PROTEASE FROM METHANOCALDOCOCCUS JANNASCHII COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ZINC METALLOPROTEASE MJ0392; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SITE-2 PROTEASE RESIDUES 1-224; COMPND 5 EC: 3.4.24.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 2190; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: C43(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS INTRAMEMBRANE PROTEASE, METALLOPROTEASE, CBS DOMAIN, HYDROLASE, KEYWDS 2 METAL-BINDING, TRANSMEMBRANE, ZINC EXPDTA X-RAY DIFFRACTION AUTHOR P.D.JEFFREY,L.FENG,H.YAN,Z.WU,N.YAN,Z.WANG,Y.SHI REVDAT 3 21-FEB-24 3B4R 1 REMARK REVDAT 2 24-FEB-09 3B4R 1 VERSN REVDAT 1 15-JAN-08 3B4R 0 JRNL AUTH L.FENG,H.YAN,Z.WU,N.YAN,Z.WANG,P.D.JEFFREY,Y.SHI JRNL TITL STRUCTURE OF A SITE-2 PROTEASE FAMILY INTRAMEMBRANE JRNL TITL 2 METALLOPROTEASE. JRNL REF SCIENCE V. 318 1608 2007 JRNL REFN ISSN 0036-8075 JRNL PMID 18063795 JRNL DOI 10.1126/SCIENCE.1150755 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1526734.750 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 11268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.318 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 570 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.013 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.51 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1592 REMARK 3 BIN R VALUE (WORKING SET) : 0.4410 REMARK 3 BIN FREE R VALUE : 0.4460 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 108 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.043 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3404 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 96.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.43000 REMARK 3 B22 (A**2) : 7.43000 REMARK 3 B33 (A**2) : -14.85000 REMARK 3 B12 (A**2) : 24.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.52 REMARK 3 ESD FROM SIGMAA (A) : 0.81 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.63 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.95 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.000 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.300 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.900 ; 2.500 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.300 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.800 ; 3.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.24 REMARK 3 BSOL : 27.55 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ZINC.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3B4R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000045077. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-07; 17-SEP-07 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8.8 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X29A; X29A REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0809; 0.97909, 0.97925 REMARK 200 MONOCHROMATOR : SI(111); SI(111) REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11853 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.48500 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS (PH 8.8), 20% (W/V) PEG400, REMARK 280 50 MM NACL, 5 MM CACL2 AND 30 MM MGCL2, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 62.21000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.91696 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 45.57333 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 62.21000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 35.91696 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 45.57333 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 62.21000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 35.91696 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.57333 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 71.83392 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 91.14667 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 71.83392 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 91.14667 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 71.83392 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 91.14667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2790 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 LYS A 221 REMARK 465 ALA A 222 REMARK 465 LYS A 223 REMARK 465 ASP A 224 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ASN B 219 REMARK 465 ILE B 220 REMARK 465 LYS B 221 REMARK 465 ALA B 222 REMARK 465 LYS B 223 REMARK 465 ASP B 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 HIS B 58 OD1 ASP B 148 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 7 -58.30 -124.49 REMARK 500 PHE A 8 159.71 172.71 REMARK 500 MET A 11 29.80 43.52 REMARK 500 ASN A 36 55.29 -92.70 REMARK 500 ILE A 38 -71.85 -43.07 REMARK 500 LYS A 64 34.00 -71.45 REMARK 500 TYR A 65 -22.70 -156.09 REMARK 500 VAL A 67 49.74 -57.97 REMARK 500 LYS A 68 7.30 -67.14 REMARK 500 GLU A 70 -60.78 -94.29 REMARK 500 ASP A 84 -134.80 -123.69 REMARK 500 GLU A 91 -73.19 -49.34 REMARK 500 LEU A 92 -40.57 -29.76 REMARK 500 VAL A 108 -70.21 -70.33 REMARK 500 SER A 113 42.85 -76.46 REMARK 500 GLN A 114 0.73 -150.58 REMARK 500 PHE A 116 145.72 -179.60 REMARK 500 ASP A 117 -178.47 -170.59 REMARK 500 ASN A 140 24.65 -76.27 REMARK 500 PRO A 143 74.90 -64.40 REMARK 500 SER A 158 -71.94 -13.50 REMARK 500 LYS A 159 5.13 -64.14 REMARK 500 ARG A 209 -74.44 -44.53 REMARK 500 LEU B 7 -66.89 -128.29 REMARK 500 ILE B 38 -47.28 -175.57 REMARK 500 LYS B 64 21.90 -77.66 REMARK 500 TYR B 65 -124.46 -146.24 REMARK 500 VAL B 67 -4.47 69.42 REMARK 500 LYS B 68 59.37 -58.53 REMARK 500 VAL B 80 56.93 -98.35 REMARK 500 ALA B 81 99.09 -51.97 REMARK 500 ASP B 84 -129.95 -118.02 REMARK 500 PRO B 87 155.32 -47.27 REMARK 500 GLU B 89 2.13 104.42 REMARK 500 GLU B 91 -87.28 -61.00 REMARK 500 LEU B 92 -45.09 -28.34 REMARK 500 VAL B 108 -70.99 -66.54 REMARK 500 SER B 113 47.81 -71.68 REMARK 500 GLN B 114 2.42 -156.49 REMARK 500 PHE B 116 147.53 -175.34 REMARK 500 LEU B 129 -71.65 -40.57 REMARK 500 SER B 130 -59.86 -29.91 REMARK 500 ASN B 140 20.48 -65.54 REMARK 500 PRO B 143 75.77 -58.58 REMARK 500 SER B 158 -70.59 -18.66 REMARK 500 LYS B 159 -19.08 -46.15 REMARK 500 TYR B 161 -14.61 -143.10 REMARK 500 TYR B 163 -77.53 -35.04 REMARK 500 LEU B 164 -58.17 -27.54 REMARK 500 SER B 208 8.30 -65.91 REMARK 500 REMARK 500 THIS ENTRY HAS 52 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 225 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 54 NE2 REMARK 620 2 HIS A 58 NE2 82.6 REMARK 620 3 ASP A 148 OD1 139.6 69.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 225 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 54 NE2 REMARK 620 2 HIS B 58 NE2 76.1 REMARK 620 3 ASP B 148 OD1 108.3 57.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 225 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 225 DBREF 3B4R A 1 224 UNP Q57837 Y392_METJA 1 224 DBREF 3B4R B 1 224 UNP Q57837 Y392_METJA 1 224 SEQRES 1 A 224 MET ASN TYR SER ILE ARG LEU PHE LYS ILE MET GLY ILE SEQRES 2 A 224 PRO ILE GLU LEU HIS ILE THR PHE ILE LEU PHE LEU VAL SEQRES 3 A 224 VAL ILE ILE GLY LEU SER ILE MET ASN ASN SER ILE PHE SEQRES 4 A 224 TRP ALA VAL LEU PHE ILE LEU LEU PHE VAL SER VAL VAL SEQRES 5 A 224 LEU HIS GLU LEU GLY HIS SER TYR VAL ALA LYS LYS TYR SEQRES 6 A 224 GLY VAL LYS ILE GLU LYS ILE LEU LEU LEU PRO ILE GLY SEQRES 7 A 224 GLY VAL ALA MET MET ASP LYS ILE PRO LYS GLU GLY GLU SEQRES 8 A 224 LEU ARG ILE GLY ILE ALA GLY PRO LEU VAL SER PHE ILE SEQRES 9 A 224 ILE GLY ILE VAL LEU LEU ILE VAL SER GLN PHE PHE ASP SEQRES 10 A 224 ILE ASN ILE ASN GLY TYR PRO LEU LEU TYR THR LEU SER SEQRES 11 A 224 LEU LEU ASN LEU MET LEU GLY GLY PHE ASN LEU ILE PRO SEQRES 12 A 224 ALA PHE PRO MET ASP GLY GLY ARG ILE LEU ARG ALA ILE SEQRES 13 A 224 LEU SER LYS LYS TYR GLY TYR LEU LYS SER THR LYS ILE SEQRES 14 A 224 ALA ALA ASN ILE GLY LYS SER LEU ALA LEU ILE MET LEU SEQRES 15 A 224 LEU PHE GLY LEU LEU SER MET ASN ILE ILE LEU ILE LEU SEQRES 16 A 224 VAL SER LEU PHE VAL TYR PHE GLY ALA GLU GLN GLU SER SEQRES 17 A 224 ARG VAL VAL GLU VAL GLU THR ILE PHE LYS ASN ILE LYS SEQRES 18 A 224 ALA LYS ASP SEQRES 1 B 224 MET ASN TYR SER ILE ARG LEU PHE LYS ILE MET GLY ILE SEQRES 2 B 224 PRO ILE GLU LEU HIS ILE THR PHE ILE LEU PHE LEU VAL SEQRES 3 B 224 VAL ILE ILE GLY LEU SER ILE MET ASN ASN SER ILE PHE SEQRES 4 B 224 TRP ALA VAL LEU PHE ILE LEU LEU PHE VAL SER VAL VAL SEQRES 5 B 224 LEU HIS GLU LEU GLY HIS SER TYR VAL ALA LYS LYS TYR SEQRES 6 B 224 GLY VAL LYS ILE GLU LYS ILE LEU LEU LEU PRO ILE GLY SEQRES 7 B 224 GLY VAL ALA MET MET ASP LYS ILE PRO LYS GLU GLY GLU SEQRES 8 B 224 LEU ARG ILE GLY ILE ALA GLY PRO LEU VAL SER PHE ILE SEQRES 9 B 224 ILE GLY ILE VAL LEU LEU ILE VAL SER GLN PHE PHE ASP SEQRES 10 B 224 ILE ASN ILE ASN GLY TYR PRO LEU LEU TYR THR LEU SER SEQRES 11 B 224 LEU LEU ASN LEU MET LEU GLY GLY PHE ASN LEU ILE PRO SEQRES 12 B 224 ALA PHE PRO MET ASP GLY GLY ARG ILE LEU ARG ALA ILE SEQRES 13 B 224 LEU SER LYS LYS TYR GLY TYR LEU LYS SER THR LYS ILE SEQRES 14 B 224 ALA ALA ASN ILE GLY LYS SER LEU ALA LEU ILE MET LEU SEQRES 15 B 224 LEU PHE GLY LEU LEU SER MET ASN ILE ILE LEU ILE LEU SEQRES 16 B 224 VAL SER LEU PHE VAL TYR PHE GLY ALA GLU GLN GLU SER SEQRES 17 B 224 ARG VAL VAL GLU VAL GLU THR ILE PHE LYS ASN ILE LYS SEQRES 18 B 224 ALA LYS ASP HET ZN A 225 1 HET ZN B 225 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) HELIX 1 1 ILE A 19 SER A 32 1 14 HELIX 2 2 SER A 37 LYS A 64 1 28 HELIX 3 3 GLY A 90 SER A 113 1 24 HELIX 4 4 LEU A 125 ASN A 140 1 16 HELIX 5 5 MET A 147 GLY A 162 1 16 HELIX 6 6 GLY A 162 SER A 188 1 27 HELIX 7 7 ASN A 190 ASN A 219 1 30 HELIX 8 8 HIS B 18 ASN B 35 1 18 HELIX 9 9 ILE B 38 LYS B 64 1 27 HELIX 10 10 GLU B 89 SER B 113 1 25 HELIX 11 11 LEU B 125 ASN B 140 1 16 HELIX 12 12 MET B 147 GLY B 162 1 16 HELIX 13 13 GLY B 162 SER B 188 1 27 HELIX 14 14 ASN B 190 GLN B 206 1 17 SHEET 1 A 3 SER A 4 ILE A 10 0 SHEET 2 A 3 ILE A 13 HIS A 18 -1 O ILE A 13 N ILE A 10 SHEET 3 A 3 ILE A 72 LEU A 74 1 O ILE A 72 N GLU A 16 SHEET 1 B 2 ASN A 119 ILE A 120 0 SHEET 2 B 2 TYR A 123 PRO A 124 -1 O TYR A 123 N ILE A 120 SHEET 1 C 3 ILE B 5 ILE B 10 0 SHEET 2 C 3 ILE B 13 LEU B 17 -1 O ILE B 13 N ILE B 10 SHEET 3 C 3 ILE B 72 LEU B 74 1 O ILE B 72 N GLU B 16 SHEET 1 D 2 ASN B 119 ILE B 120 0 SHEET 2 D 2 TYR B 123 PRO B 124 -1 O TYR B 123 N ILE B 120 LINK NE2 HIS A 54 ZN ZN A 225 1555 1555 2.32 LINK NE2 HIS A 58 ZN ZN A 225 1555 1555 2.33 LINK OD1 ASP A 148 ZN ZN A 225 1555 1555 2.21 LINK NE2 HIS B 54 ZN ZN B 225 1555 1555 2.29 LINK NE2 HIS B 58 ZN ZN B 225 1555 1555 2.22 LINK OD1 ASP B 148 ZN ZN B 225 1555 1555 2.16 CISPEP 1 PHE A 145 PRO A 146 0 0.11 CISPEP 2 PHE B 145 PRO B 146 0 -0.33 SITE 1 AC1 5 HIS A 54 GLU A 55 HIS A 58 ASN A 140 SITE 2 AC1 5 ASP A 148 SITE 1 AC2 4 HIS B 54 GLU B 55 HIS B 58 ASP B 148 CRYST1 124.420 124.420 136.720 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008037 0.004640 0.000000 0.00000 SCALE2 0.000000 0.009281 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007314 0.00000