HEADER TRANSPORT PROTEIN 26-OCT-07 3B5J TITLE CRYSTAL STRUCTURES OF THE S504A MUTANT OF AN ISOLATED ABC-ATPASE IN TITLE 2 COMPLEX WITH TNP-ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-HEMOLYSIN TRANSLOCATION ATP-BINDING PROTEIN HLYB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ABC TRANSPORTER, RESIDUES UNP 467-707; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: HLYB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD KEYWDS ABC-TRANSPORTER, NUCLEOTIDE-BINDING DOAMIN, ATPASE, ATP-BINDING, KEYWDS 2 HYDROLASE, INNER MEMBRANE, MEMBRANE, TRANSMEMBRANE, TRANSPORT KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.OSWALD,S.JENEWEIN,S.H.J.SMITS,I.B.HOLLAND,L.SCHMITT REVDAT 6 01-NOV-23 3B5J 1 REMARK REVDAT 5 10-NOV-21 3B5J 1 REMARK SEQADV REVDAT 4 13-JUL-11 3B5J 1 VERSN REVDAT 3 24-FEB-09 3B5J 1 VERSN REVDAT 2 03-JUN-08 3B5J 1 JRNL REVDAT 1 15-JAN-08 3B5J 0 JRNL AUTH C.OSWALD,S.JENEWEIN,S.H.J.SMITS,I.B.HOLLAND,L.SCHMITT JRNL TITL WATER-MEDIATED PROTEIN-FLUOROPHORE INTERACTIONS MODULATE THE JRNL TITL 2 AFFINITY OF AN ABC-ATPASE/TNP-ADP COMPLEX JRNL REF J.STRUCT.BIOL. V. 162 85 2008 JRNL REFN ISSN 1047-8477 JRNL PMID 18155559 JRNL DOI 10.1016/J.JSB.2007.11.006 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 17.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 14625 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.280 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1097 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 947 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1911 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 261 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 31.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.288 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.233 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.177 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.481 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1986 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2691 ; 1.174 ; 1.991 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 242 ; 5.393 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;37.982 ;24.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 360 ;14.462 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;12.764 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 305 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1467 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 986 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1362 ; 0.298 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 227 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 45 ; 0.170 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.154 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1233 ; 0.461 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1941 ; 0.770 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 880 ; 1.099 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 750 ; 1.891 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 465 A 549 REMARK 3 RESIDUE RANGE : A 625 A 707 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2680 -4.2890 20.7850 REMARK 3 T TENSOR REMARK 3 T11: -0.1215 T22: -0.2376 REMARK 3 T33: -0.1898 T12: 0.0114 REMARK 3 T13: -0.0073 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.3404 L22: 2.4804 REMARK 3 L33: 1.5352 L12: 0.7348 REMARK 3 L13: 0.0690 L23: -0.1829 REMARK 3 S TENSOR REMARK 3 S11: -0.0124 S12: 0.0282 S13: 0.0581 REMARK 3 S21: 0.0359 S22: 0.0491 S23: 0.1277 REMARK 3 S31: 0.1003 S32: -0.0356 S33: -0.0367 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 550 A 624 REMARK 3 ORIGIN FOR THE GROUP (A): 8.2730 8.6610 7.8420 REMARK 3 T TENSOR REMARK 3 T11: -0.0860 T22: -0.3025 REMARK 3 T33: 0.0384 T12: -0.0085 REMARK 3 T13: -0.2189 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 8.7764 L22: 3.0582 REMARK 3 L33: 4.1838 L12: -1.4233 REMARK 3 L13: 2.1519 L23: 0.3461 REMARK 3 S TENSOR REMARK 3 S11: -0.3165 S12: -0.2851 S13: 0.7824 REMARK 3 S21: -0.1751 S22: -0.0694 S23: 0.2459 REMARK 3 S31: -0.4005 S32: -0.1538 S33: 0.3858 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3B5J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-OCT-07. REMARK 100 THE DEPOSITION ID IS D_1000045104. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8423 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14635 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.29100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2FF7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 89.60000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 89.60000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 529 -11.47 67.35 REMARK 500 ASN A 552 57.19 -141.06 REMARK 500 MET A 570 -136.82 -90.72 REMARK 500 ALA A 604 -51.11 -133.95 REMARK 500 THR A 633 -72.40 -85.78 REMARK 500 GLU A 695 19.24 55.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 12D A 708 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PMK RELATED DB: PDB DBREF 3B5J A 467 707 UNP P08716 HLYBP_ECOLX 467 707 SEQADV 3B5J HIS A 465 UNP P08716 EXPRESSION TAG SEQADV 3B5J HIS A 466 UNP P08716 EXPRESSION TAG SEQADV 3B5J ALA A 504 UNP P08716 SER 504 ENGINEERED MUTATION SEQRES 1 A 243 HIS HIS ASP ILE THR PHE ARG ASN ILE ARG PHE ARG TYR SEQRES 2 A 243 LYS PRO ASP SER PRO VAL ILE LEU ASP ASN ILE ASN LEU SEQRES 3 A 243 SER ILE LYS GLN GLY GLU VAL ILE GLY ILE VAL GLY ARG SEQRES 4 A 243 ALA GLY SER GLY LYS SER THR LEU THR LYS LEU ILE GLN SEQRES 5 A 243 ARG PHE TYR ILE PRO GLU ASN GLY GLN VAL LEU ILE ASP SEQRES 6 A 243 GLY HIS ASP LEU ALA LEU ALA ASP PRO ASN TRP LEU ARG SEQRES 7 A 243 ARG GLN VAL GLY VAL VAL LEU GLN ASP ASN VAL LEU LEU SEQRES 8 A 243 ASN ARG SER ILE ILE ASP ASN ILE SER LEU ALA ASN PRO SEQRES 9 A 243 GLY MET SER VAL GLU LYS VAL ILE TYR ALA ALA LYS LEU SEQRES 10 A 243 ALA GLY ALA HIS ASP PHE ILE SER GLU LEU ARG GLU GLY SEQRES 11 A 243 TYR ASN THR ILE VAL GLY GLU GLN GLY ALA GLY LEU SER SEQRES 12 A 243 GLY GLY GLN ARG GLN ARG ILE ALA ILE ALA ARG ALA LEU SEQRES 13 A 243 VAL ASN ASN PRO LYS ILE LEU ILE PHE ASP GLU ALA THR SEQRES 14 A 243 SER ALA LEU ASP TYR GLU SER GLU HIS VAL ILE MET ARG SEQRES 15 A 243 ASN MET HIS LYS ILE CYS LYS GLY ARG THR VAL ILE ILE SEQRES 16 A 243 ILE ALA HIS ARG LEU SER THR VAL LYS ASN ALA ASP ARG SEQRES 17 A 243 ILE ILE VAL MET GLU LYS GLY LYS ILE VAL GLU GLN GLY SEQRES 18 A 243 LYS HIS LYS GLU LEU LEU SER GLU PRO GLU SER LEU TYR SEQRES 19 A 243 SER TYR LEU TYR GLN LEU GLN SER ASP HET 12D A 708 42 HETNAM 12D 2',3'-O-[(1R,6R)-2,4,6-TRINITROCYCLOHEXA-2,4-DIENE-1,1- HETNAM 2 12D DIYL]ADENOSINE 5'-(TRIHYDROGEN DIPHOSPHATE) FORMUL 2 12D C16 H16 N8 O16 P2 FORMUL 3 HOH *261(H2 O) HELIX 1 1 GLY A 507 GLN A 516 1 10 HELIX 2 2 ASP A 537 GLN A 544 1 8 HELIX 3 3 SER A 558 SER A 564 1 7 HELIX 4 4 SER A 571 ALA A 582 1 12 HELIX 5 5 ALA A 584 GLU A 590 1 7 HELIX 6 6 GLU A 593 THR A 597 5 5 HELIX 7 7 SER A 607 VAL A 621 1 15 HELIX 8 8 ASP A 637 LYS A 653 1 17 HELIX 9 9 ARG A 663 LYS A 668 5 6 HELIX 10 10 LYS A 686 GLU A 693 1 8 HELIX 11 11 SER A 696 SER A 706 1 11 SHEET 1 A 4 VAL A 483 LYS A 493 0 SHEET 2 A 4 HIS A 466 ARG A 476 -1 N PHE A 470 O LEU A 490 SHEET 3 A 4 ASN A 523 ILE A 528 -1 O LEU A 527 N THR A 469 SHEET 4 A 4 HIS A 531 ASP A 532 -1 O HIS A 531 N ILE A 528 SHEET 1 B 6 VAL A 545 VAL A 548 0 SHEET 2 B 6 ILE A 626 PHE A 629 1 O ILE A 626 N GLY A 546 SHEET 3 B 6 THR A 656 ILE A 660 1 O ILE A 658 N LEU A 627 SHEET 4 B 6 VAL A 497 VAL A 501 1 N ILE A 498 O VAL A 657 SHEET 5 B 6 ARG A 672 GLU A 677 1 O ILE A 674 N GLY A 499 SHEET 6 B 6 LYS A 680 GLY A 685 -1 O GLY A 685 N ILE A 673 SITE 1 AC1 27 HOH A 3 HOH A 5 HOH A 23 HOH A 34 SITE 2 AC1 27 HOH A 43 HOH A 85 HOH A 140 HOH A 176 SITE 3 AC1 27 HOH A 225 HOH A 242 TYR A 477 PRO A 482 SITE 4 AC1 27 ILE A 484 GLY A 505 SER A 506 GLY A 507 SITE 5 AC1 27 LYS A 508 SER A 509 THR A 510 LYS A 513 SITE 6 AC1 27 TYR A 519 TRP A 540 ARG A 543 GLU A 689 SITE 7 AC1 27 SER A 692 GLU A 693 PRO A 694 CRYST1 179.200 34.600 38.000 90.00 98.40 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005580 0.000000 0.000824 0.00000 SCALE2 0.000000 0.028902 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026601 0.00000