HEADER TRANSCRIPTION 28-OCT-07 3B6C TITLE CRYSTAL STRUCTURE OF THE STREPTOMYCES COELICOLOR TETR FAMILY PROTEIN TITLE 2 ACTR IN COMPLEX WITH (S)-DNPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTII PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PUTATIVE TRANSCRIPTIONAL REGULATORY PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR; SOURCE 3 ORGANISM_TAXID: 1902; SOURCE 4 STRAIN: M145; SOURCE 5 GENE: ACTII; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PPROEX-HTA KEYWDS TRANSCRIPTIONAL REPRESSOR, DNA-BINDING PROTEIN, TETR FAMILY, KEYWDS 2 ACTINORHODIN, (S)-DNPA, LIGAND, TRANSCRIPTION REGULATION, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR A.R.WILLEMS,M.S.JUNOP REVDAT 5 30-AUG-23 3B6C 1 REMARK SEQADV REVDAT 4 25-OCT-17 3B6C 1 REMARK REVDAT 3 24-FEB-09 3B6C 1 VERSN REVDAT 2 04-MAR-08 3B6C 1 JRNL REVDAT 1 05-FEB-08 3B6C 0 JRNL AUTH A.R.WILLEMS,K.TAHLAN,T.TAGUCHI,K.ZHANG,Z.Z.LEE,K.ICHINOSE, JRNL AUTH 2 M.S.JUNOP,J.R.NODWELL JRNL TITL CRYSTAL STRUCTURES OF THE STREPTOMYCES COELICOLOR TETR-LIKE JRNL TITL 2 PROTEIN ACTR ALONE AND IN COMPLEX WITH ACTINORHODIN OR THE JRNL TITL 3 ACTINORHODIN BIOSYNTHETIC PRECURSOR (S)-DNPA. JRNL REF J.MOL.BIOL. V. 376 1377 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18207163 JRNL DOI 10.1016/J.JMB.2007.12.061 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 70.0 REMARK 3 NUMBER OF REFLECTIONS : 14054 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.246 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 743 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 685 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 46.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.3270 REMARK 3 BIN FREE R VALUE SET COUNT : 26 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3082 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 63 REMARK 3 SOLVENT ATOMS : 146 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.00000 REMARK 3 B22 (A**2) : 5.96000 REMARK 3 B33 (A**2) : -0.96000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.236 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.366 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.267 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.324 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3199 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 3 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4341 ; 0.920 ; 2.015 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9 ; 9.262 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 401 ; 6.666 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 136 ;37.099 ;23.088 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 531 ;21.245 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;23.685 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 499 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2413 ; 0.012 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1715 ; 0.300 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2 ; 0.419 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2254 ; 0.335 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): 3 ; 0.245 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 263 ; 0.269 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.343 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.431 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2003 ; 1.354 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3188 ; 2.404 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1196 ; 1.829 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1153 ; 2.810 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 28 A 91 REMARK 3 ORIGIN FOR THE GROUP (A): -7.0679 -10.2235 -7.1095 REMARK 3 T TENSOR REMARK 3 T11: -0.0193 T22: 0.0398 REMARK 3 T33: -0.0239 T12: -0.0399 REMARK 3 T13: -0.0721 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 2.6069 L22: 1.4435 REMARK 3 L33: 4.2432 L12: 0.3061 REMARK 3 L13: -3.1671 L23: -1.1181 REMARK 3 S TENSOR REMARK 3 S11: -0.1220 S12: -0.1185 S13: -0.1380 REMARK 3 S21: 0.0681 S22: -0.1184 S23: -0.0653 REMARK 3 S31: -0.1649 S32: 0.1267 S33: 0.2404 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 92 A 130 REMARK 3 ORIGIN FOR THE GROUP (A): -28.6895 -11.3779 -1.2513 REMARK 3 T TENSOR REMARK 3 T11: -0.0128 T22: -0.0540 REMARK 3 T33: 0.0640 T12: -0.0514 REMARK 3 T13: -0.0130 T23: -0.0588 REMARK 3 L TENSOR REMARK 3 L11: 10.9013 L22: 0.0674 REMARK 3 L33: 2.9109 L12: 0.6799 REMARK 3 L13: 1.2635 L23: -0.1840 REMARK 3 S TENSOR REMARK 3 S11: -0.1450 S12: 0.4159 S13: 0.0592 REMARK 3 S21: 0.1021 S22: -0.0645 S23: -0.0106 REMARK 3 S31: 0.1216 S32: 0.0369 S33: 0.2096 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 131 A 177 REMARK 3 ORIGIN FOR THE GROUP (A): -31.5264 -4.3231 -2.4954 REMARK 3 T TENSOR REMARK 3 T11: -0.0316 T22: -0.0552 REMARK 3 T33: -0.0388 T12: -0.0326 REMARK 3 T13: -0.0458 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 4.6332 L22: 2.3122 REMARK 3 L33: 2.5970 L12: -1.4839 REMARK 3 L13: -1.4132 L23: -1.5421 REMARK 3 S TENSOR REMARK 3 S11: -0.1569 S12: 0.4774 S13: 0.1813 REMARK 3 S21: 0.2801 S22: -0.0068 S23: 0.1200 REMARK 3 S31: -0.3738 S32: -0.0654 S33: 0.1637 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 190 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): -29.8250 -7.1625 31.0533 REMARK 3 T TENSOR REMARK 3 T11: 0.1432 T22: -0.1214 REMARK 3 T33: -0.1947 T12: -0.1255 REMARK 3 T13: 0.0163 T23: -0.1026 REMARK 3 L TENSOR REMARK 3 L11: 10.8160 L22: 9.6683 REMARK 3 L33: 7.2200 L12: -1.6577 REMARK 3 L13: 6.0901 L23: 2.5864 REMARK 3 S TENSOR REMARK 3 S11: 1.0100 S12: -0.6051 S13: -0.4133 REMARK 3 S21: 0.3493 S22: -0.2161 S23: -0.1972 REMARK 3 S31: 1.0421 S32: 0.1828 S33: -0.7938 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 219 A 241 REMARK 3 ORIGIN FOR THE GROUP (A): -37.0181 -9.4242 9.2379 REMARK 3 T TENSOR REMARK 3 T11: 0.0767 T22: -0.0170 REMARK 3 T33: -0.0365 T12: -0.0589 REMARK 3 T13: -0.0045 T23: -0.0962 REMARK 3 L TENSOR REMARK 3 L11: 6.8872 L22: 5.8658 REMARK 3 L33: 2.0528 L12: -5.6722 REMARK 3 L13: 1.2199 L23: -2.4858 REMARK 3 S TENSOR REMARK 3 S11: -0.3651 S12: -0.2185 S13: -0.0612 REMARK 3 S21: 0.2900 S22: 0.1542 S23: 0.1998 REMARK 3 S31: 0.4488 S32: -0.8357 S33: 0.2109 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 29 B 76 REMARK 3 ORIGIN FOR THE GROUP (A): -8.0371 13.4700 24.7055 REMARK 3 T TENSOR REMARK 3 T11: -0.1307 T22: 0.2165 REMARK 3 T33: -0.1181 T12: -0.1734 REMARK 3 T13: 0.0966 T23: 0.1388 REMARK 3 L TENSOR REMARK 3 L11: 5.6590 L22: 3.5211 REMARK 3 L33: 10.4035 L12: 2.0469 REMARK 3 L13: 4.9962 L23: -2.2749 REMARK 3 S TENSOR REMARK 3 S11: -0.4711 S12: 0.9744 S13: 0.6330 REMARK 3 S21: -0.1739 S22: 0.0927 S23: -0.0855 REMARK 3 S31: -0.1051 S32: 1.3172 S33: 0.3784 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 77 B 107 REMARK 3 ORIGIN FOR THE GROUP (A): -33.0150 8.8109 21.8409 REMARK 3 T TENSOR REMARK 3 T11: 0.0143 T22: -0.1992 REMARK 3 T33: 0.0100 T12: -0.0131 REMARK 3 T13: 0.1149 T23: -0.1069 REMARK 3 L TENSOR REMARK 3 L11: 12.4786 L22: 0.6184 REMARK 3 L33: 4.1940 L12: 1.7024 REMARK 3 L13: 2.0882 L23: -0.8578 REMARK 3 S TENSOR REMARK 3 S11: 0.0551 S12: -0.2053 S13: 0.6959 REMARK 3 S21: 0.4176 S22: -0.2612 S23: 0.3403 REMARK 3 S31: -0.2883 S32: 0.1179 S33: 0.2061 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 108 B 177 REMARK 3 ORIGIN FOR THE GROUP (A): -29.8923 4.3750 16.9930 REMARK 3 T TENSOR REMARK 3 T11: 0.0110 T22: -0.1248 REMARK 3 T33: -0.0342 T12: 0.0148 REMARK 3 T13: 0.0817 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 3.8664 L22: 2.6418 REMARK 3 L33: 3.9448 L12: 1.8109 REMARK 3 L13: 0.2717 L23: -1.0119 REMARK 3 S TENSOR REMARK 3 S11: 0.1118 S12: 0.1638 S13: 0.0664 REMARK 3 S21: 0.0959 S22: -0.2495 S23: 0.2353 REMARK 3 S31: 0.1123 S32: 0.3911 S33: 0.1377 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 189 B 242 REMARK 3 ORIGIN FOR THE GROUP (A): -33.5393 4.9226 -5.1477 REMARK 3 T TENSOR REMARK 3 T11: -0.0505 T22: 0.0815 REMARK 3 T33: -0.0365 T12: 0.0556 REMARK 3 T13: -0.0454 T23: 0.1164 REMARK 3 L TENSOR REMARK 3 L11: 2.6225 L22: 1.9147 REMARK 3 L33: 2.2905 L12: -0.9367 REMARK 3 L13: -1.8685 L23: 1.8928 REMARK 3 S TENSOR REMARK 3 S11: 0.2914 S12: 0.6534 S13: 0.4886 REMARK 3 S21: -0.1100 S22: -0.1761 S23: 0.0077 REMARK 3 S31: -0.7296 S32: -0.5489 S33: -0.1153 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3B6C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045133. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1 REMARK 200 MONOCHROMATOR : SI (111) 2 CRYSTALS (NOT A REMARK 200 CHANNEL-CUT) REMARK 200 OPTICS : COLLIMATING AND FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19458 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 49.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.1 REMARK 200 DATA REDUNDANCY : 4.630 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.47 REMARK 200 R MERGE FOR SHELL (I) : 0.21100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 6.0.0 REMARK 200 STARTING MODEL: PDB ENTRY 2OPT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG4000, 91MM SODIUM ACETATE, 45MM REMARK 280 BIS-TRIS, 23MM KCL, 9.1MM TAURINE, 4.6MM TRIS, 0.45MM DTT AND, REMARK 280 AFTER DEHYDRATION, LESS THAN 100 UG (S)-DNPA, PH 6.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.98450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.72650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.69800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.72650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.98450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.69800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3970 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 26 REMARK 465 ALA A 27 REMARK 465 ASN A 178 REMARK 465 PRO A 179 REMARK 465 GLY A 180 REMARK 465 THR A 181 REMARK 465 GLU A 182 REMARK 465 GLN A 183 REMARK 465 GLY A 184 REMARK 465 ARG A 185 REMARK 465 GLU A 186 REMARK 465 GLN A 187 REMARK 465 ALA A 188 REMARK 465 GLY A 189 REMARK 465 GLY A 242 REMARK 465 GLU A 243 REMARK 465 ALA A 244 REMARK 465 ALA A 245 REMARK 465 ASP A 246 REMARK 465 ASP A 247 REMARK 465 GLN A 248 REMARK 465 VAL A 249 REMARK 465 ARG A 250 REMARK 465 THR A 251 REMARK 465 ALA A 252 REMARK 465 GLY A 253 REMARK 465 SER A 254 REMARK 465 PRO A 255 REMARK 465 PRO A 256 REMARK 465 ALA A 257 REMARK 465 GLU A 258 REMARK 465 SER A 259 REMARK 465 GLY B 26 REMARK 465 ALA B 27 REMARK 465 MET B 28 REMARK 465 ASN B 178 REMARK 465 PRO B 179 REMARK 465 GLY B 180 REMARK 465 THR B 181 REMARK 465 GLU B 182 REMARK 465 GLN B 183 REMARK 465 GLY B 184 REMARK 465 ARG B 185 REMARK 465 GLU B 186 REMARK 465 GLN B 187 REMARK 465 ALA B 188 REMARK 465 GLU B 243 REMARK 465 ALA B 244 REMARK 465 ALA B 245 REMARK 465 ASP B 246 REMARK 465 ASP B 247 REMARK 465 GLN B 248 REMARK 465 VAL B 249 REMARK 465 ARG B 250 REMARK 465 THR B 251 REMARK 465 ALA B 252 REMARK 465 GLY B 253 REMARK 465 SER B 254 REMARK 465 PRO B 255 REMARK 465 PRO B 256 REMARK 465 ALA B 257 REMARK 465 GLU B 258 REMARK 465 SER B 259 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 176 OG REMARK 470 VAL A 190 CG1 CG2 REMARK 470 ARG B 55 CG CD NE CZ NH1 NH2 REMARK 470 ASP B 76 CG OD1 OD2 REMARK 470 LYS B 200 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 130 C - N - CD ANGL. DEV. = -12.7 DEGREES REMARK 500 PRO A 133 C - N - CD ANGL. DEV. = -18.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 30 124.13 -38.61 REMARK 500 VAL A 72 -10.87 -141.11 REMARK 500 ASP A 127 40.72 -141.89 REMARK 500 LEU A 131 126.31 -13.49 REMARK 500 PRO A 133 -87.75 -1.50 REMARK 500 PRO A 203 102.01 -51.83 REMARK 500 ASP A 221 155.11 -30.76 REMARK 500 GLU B 47 -3.11 -140.48 REMARK 500 ARG B 128 -165.94 -128.94 REMARK 500 PRO B 130 24.35 -73.06 REMARK 500 PRO B 133 -58.17 -28.97 REMARK 500 ASP B 153 -70.63 -51.39 REMARK 500 PRO B 203 94.94 -55.69 REMARK 500 PHE B 207 65.83 -117.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 THE CA INDEX NUMBER OF COMPOUND SDN IS 224586-86-1. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SDN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SDN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SDN B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2OPT RELATED DB: PDB REMARK 900 SAME PROTEIN IN ITS APO FORM REMARK 900 RELATED ID: 3B6A RELATED DB: PDB REMARK 900 SAME PROTEIN BOUND TO ACTINORHODIN DBREF 3B6C A 30 259 UNP Q53901 Q53901_STRCO 30 259 DBREF 3B6C B 30 259 UNP Q53901 Q53901_STRCO 30 259 SEQADV 3B6C GLY A 26 UNP Q53901 EXPRESSION TAG SEQADV 3B6C ALA A 27 UNP Q53901 EXPRESSION TAG SEQADV 3B6C MET A 28 UNP Q53901 EXPRESSION TAG SEQADV 3B6C ALA A 29 UNP Q53901 EXPRESSION TAG SEQADV 3B6C GLY B 26 UNP Q53901 EXPRESSION TAG SEQADV 3B6C ALA B 27 UNP Q53901 EXPRESSION TAG SEQADV 3B6C MET B 28 UNP Q53901 EXPRESSION TAG SEQADV 3B6C ALA B 29 UNP Q53901 EXPRESSION TAG SEQRES 1 A 234 GLY ALA MET ALA PRO LEU THR GLN ASP ARG ILE VAL VAL SEQRES 2 A 234 THR ALA LEU GLY ILE LEU ASP ALA GLU GLY LEU ASP ALA SEQRES 3 A 234 LEU SER MET ARG ARG LEU ALA GLN GLU LEU LYS THR GLY SEQRES 4 A 234 HIS ALA SER LEU TYR ALA HIS VAL GLY ASN ARG ASP GLU SEQRES 5 A 234 LEU LEU ASP LEU VAL PHE ASP ILE VAL LEU THR GLU VAL SEQRES 6 A 234 GLU VAL PRO GLU PRO GLU PRO GLY ARG TRP ALA GLU GLN SEQRES 7 A 234 VAL LYS GLU MET CYS ARG SER LEU ARG ARG MET PHE LEU SEQRES 8 A 234 ALA HIS ARG ASP LEU ALA ARG ILE ALA ILE ASP ARG VAL SEQRES 9 A 234 PRO LEU GLY PRO ASN GLY MET VAL GLY MET GLU ARG THR SEQRES 10 A 234 MET ASN LEU LEU ARG SER GLY GLY LEU HIS ASP GLU LEU SEQRES 11 A 234 ALA ALA TYR GLY GLY ASP LEU LEU SER THR PHE VAL THR SEQRES 12 A 234 ALA GLU ALA LEU GLU GLN SER SER ARG ASN PRO GLY THR SEQRES 13 A 234 GLU GLN GLY ARG GLU GLN ALA GLY VAL PHE ALA ASP GLN SEQRES 14 A 234 LEU HIS GLY TYR LEU LYS SER LEU PRO ALA THR SER PHE SEQRES 15 A 234 PRO ASN LEU VAL HIS LEU ALA GLY PRO ILE THR SER LEU SEQRES 16 A 234 ASP SER ASP ARG ARG PHE GLU LEU GLY LEU GLU ILE ILE SEQRES 17 A 234 ILE ALA GLY LEU LEU ALA GLY ALA GLY GLU ALA ALA ASP SEQRES 18 A 234 ASP GLN VAL ARG THR ALA GLY SER PRO PRO ALA GLU SER SEQRES 1 B 234 GLY ALA MET ALA PRO LEU THR GLN ASP ARG ILE VAL VAL SEQRES 2 B 234 THR ALA LEU GLY ILE LEU ASP ALA GLU GLY LEU ASP ALA SEQRES 3 B 234 LEU SER MET ARG ARG LEU ALA GLN GLU LEU LYS THR GLY SEQRES 4 B 234 HIS ALA SER LEU TYR ALA HIS VAL GLY ASN ARG ASP GLU SEQRES 5 B 234 LEU LEU ASP LEU VAL PHE ASP ILE VAL LEU THR GLU VAL SEQRES 6 B 234 GLU VAL PRO GLU PRO GLU PRO GLY ARG TRP ALA GLU GLN SEQRES 7 B 234 VAL LYS GLU MET CYS ARG SER LEU ARG ARG MET PHE LEU SEQRES 8 B 234 ALA HIS ARG ASP LEU ALA ARG ILE ALA ILE ASP ARG VAL SEQRES 9 B 234 PRO LEU GLY PRO ASN GLY MET VAL GLY MET GLU ARG THR SEQRES 10 B 234 MET ASN LEU LEU ARG SER GLY GLY LEU HIS ASP GLU LEU SEQRES 11 B 234 ALA ALA TYR GLY GLY ASP LEU LEU SER THR PHE VAL THR SEQRES 12 B 234 ALA GLU ALA LEU GLU GLN SER SER ARG ASN PRO GLY THR SEQRES 13 B 234 GLU GLN GLY ARG GLU GLN ALA GLY VAL PHE ALA ASP GLN SEQRES 14 B 234 LEU HIS GLY TYR LEU LYS SER LEU PRO ALA THR SER PHE SEQRES 15 B 234 PRO ASN LEU VAL HIS LEU ALA GLY PRO ILE THR SER LEU SEQRES 16 B 234 ASP SER ASP ARG ARG PHE GLU LEU GLY LEU GLU ILE ILE SEQRES 17 B 234 ILE ALA GLY LEU LEU ALA GLY ALA GLY GLU ALA ALA ASP SEQRES 18 B 234 ASP GLN VAL ARG THR ALA GLY SER PRO PRO ALA GLU SER HET SDN A 301 22 HET SDN A 302 22 HET SDN B 303 22 HETNAM SDN [(3S)-9-HYDROXY-1-METHYL-10-OXO-4,10-DIHYDRO-3H- HETNAM 2 SDN BENZO[G]ISOCHROMEN-3-YL]ACETIC ACID HETSYN SDN 4,10-DIHYDRO-9-HYDROXY-1-METHYL-10-OXO-3-H-NAPHTHO-[2, HETSYN 2 SDN 3-C]-PYRAN-3-(S)-ACETIC ACID FORMUL 3 SDN 3(C16 H14 O5) FORMUL 6 HOH *146(H2 O) HELIX 1 1 THR A 32 GLY A 48 1 17 HELIX 2 2 LEU A 49 LEU A 52 5 4 HELIX 3 3 SER A 53 LYS A 62 1 10 HELIX 4 4 GLY A 64 GLY A 73 1 10 HELIX 5 5 ASN A 74 LEU A 87 1 14 HELIX 6 6 THR A 88 VAL A 90 5 3 HELIX 7 7 ARG A 99 HIS A 118 1 20 HELIX 8 8 ASP A 120 ILE A 126 1 7 HELIX 9 9 GLY A 132 SER A 148 1 17 HELIX 10 10 HIS A 152 ARG A 177 1 26 HELIX 11 11 VAL A 190 SER A 201 1 12 HELIX 12 12 PHE A 207 LEU A 213 1 7 HELIX 13 13 LEU A 213 SER A 219 1 7 HELIX 14 14 ASP A 221 ALA A 241 1 21 HELIX 15 15 THR B 32 GLY B 48 1 17 HELIX 16 16 LEU B 49 LEU B 52 5 4 HELIX 17 17 SER B 53 LYS B 62 1 10 HELIX 18 18 GLY B 64 GLY B 73 1 10 HELIX 19 19 ASN B 74 LEU B 87 1 14 HELIX 20 20 THR B 88 VAL B 90 5 3 HELIX 21 21 ARG B 99 HIS B 118 1 20 HELIX 22 22 ASP B 120 ILE B 126 1 7 HELIX 23 23 GLY B 132 GLY B 149 1 18 HELIX 24 24 HIS B 152 ARG B 177 1 26 HELIX 25 25 VAL B 190 SER B 201 1 12 HELIX 26 26 PHE B 207 LEU B 213 1 7 HELIX 27 27 LEU B 213 SER B 219 1 7 HELIX 28 28 ASP B 221 GLY B 242 1 22 CISPEP 1 ALA B 29 PRO B 30 0 -25.69 SITE 1 AC1 5 ASP A 161 SER A 164 THR A 165 THR A 168 SITE 2 AC1 5 SDN A 302 SITE 1 AC2 8 LEU A 87 VAL A 90 VAL A 92 MET A 107 SITE 2 AC2 8 ASN A 134 GLY A 135 GLY A 138 SDN A 301 SITE 1 AC3 9 LEU B 87 VAL B 90 VAL B 92 MET B 107 SITE 2 AC3 9 ASN B 134 GLY B 135 GLY B 138 THR B 142 SITE 3 AC3 9 SER B 164 CRYST1 55.969 79.396 103.453 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017867 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012595 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009666 0.00000