HEADER LIGASE 07-NOV-07 3BAA
TITLE STRUCTURAL BASIS FOR THE INHIBITION OF BACTERIAL NAD+ DEPENDENT DNA
TITLE 2 LIGASE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: DNA LIGASE;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: ADENYLATION DOMAIN;
COMPND 5 EC: 6.5.1.2;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS;
SOURCE 3 ORGANISM_COMMON: STREPTOCOCCUS FAECALIS;
SOURCE 4 ORGANISM_TAXID: 1351;
SOURCE 5 GENE: LIGA;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS ADENYLATION DOMAIN, DNA DAMAGE, DNA REPAIR, DNA REPLICATION, LIGASE,
KEYWDS 2 NAD
EXPDTA X-RAY DIFFRACTION
AUTHOR C.PINKO
REVDAT 4 21-FEB-24 3BAA 1 REMARK
REVDAT 3 13-JUL-11 3BAA 1 VERSN
REVDAT 2 24-FEB-09 3BAA 1 VERSN
REVDAT 1 11-NOV-08 3BAA 0
JRNL AUTH C.PINKO,A.BORCHARDT,V.NIKULIN,Y.SU
JRNL TITL STRUCTURAL BASIS FOR THE INHIBITION OF BACTERIAL NAD+
JRNL TITL 2 DEPENDENT DNA LIGASE
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 1.90 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : CNS
REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-
REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,
REMARK 3 : READ,RICE,SIMONSON,WARREN
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.24
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 704911.125
REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.9
REMARK 3 NUMBER OF REFLECTIONS : 33094
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.187
REMARK 3 R VALUE (WORKING SET) : 0.187
REMARK 3 FREE R VALUE : 0.216
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000
REMARK 3 FREE R VALUE TEST SET COUNT : 3323
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004
REMARK 3
REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA.
REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL
REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL
REMARK 3 ESTIMATED ERROR OF FREE R VALUE (NO CUTOFF) : NULL
REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 6
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.90
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4691
REMARK 3 BIN R VALUE (WORKING SET) : 0.2090
REMARK 3 BIN FREE R VALUE : 0.2420
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.10
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 528
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.011
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2506
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 80
REMARK 3 SOLVENT ATOMS : 269
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 12.70
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.10
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -1.35000
REMARK 3 B22 (A**2) : 5.83000
REMARK 3 B33 (A**2) : -4.48000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : -0.88000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20
REMARK 3 ESD FROM SIGMAA (A) : 0.10
REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23
REMARK 3 ESD FROM C-V SIGMAA (A) : 0.15
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.006
REMARK 3 BOND ANGLES (DEGREES) : 1.300
REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.00
REMARK 3 IMPROPER ANGLES (DEGREES) : 0.850
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : 1.170 ; 1.500
REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.750 ; 2.000
REMARK 3 SIDE-CHAIN BOND (A**2) : 2.080 ; 2.000
REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.140 ; 2.500
REMARK 3
REMARK 3 BULK SOLVENT MODELING.
REMARK 3 METHOD USED : FLAT MODEL
REMARK 3 KSOL : 0.43
REMARK 3 BSOL : 48.81
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM
REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM
REMARK 3 PARAMETER FILE 3 : SO4.PARAM
REMARK 3 PARAMETER FILE 4 : NMN.PARAM
REMARK 3 PARAMETER FILE 5 : 3348.PARAM
REMARK 3 PARAMETER FILE 6 : NULL
REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP
REMARK 3 TOPOLOGY FILE 2 : NULL
REMARK 3 TOPOLOGY FILE 3 : NULL
REMARK 3 TOPOLOGY FILE 4 : NULL
REMARK 3 TOPOLOGY FILE 5 : NULL
REMARK 3 TOPOLOGY FILE 6 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 3BAA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-NOV-07.
REMARK 100 THE DEPOSITION ID IS D_1000045275.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : NULL
REMARK 200 TEMPERATURE (KELVIN) : NULL
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : N
REMARK 200 RADIATION SOURCE : ROTATING ANODE
REMARK 200 BEAMLINE : NULL
REMARK 200 X-RAY GENERATOR MODEL : OTHER
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : NULL
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : NULL
REMARK 200 DETECTOR MANUFACTURER : NULL
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL
REMARK 200 DATA SCALING SOFTWARE : NULL
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33094
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900
REMARK 200 RESOLUTION RANGE LOW (A) : 24.240
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : NULL
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL
REMARK 200 SOFTWARE USED: NULL
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 57.07
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y,-Z
REMARK 290 3555 X+1/2,Y+1/2,Z
REMARK 290 4555 -X+1/2,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.24700
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.18150
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.24700
REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 43.18150
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 GLU A 2
REMARK 465 GLN A 3
REMARK 465 GLN A 4
REMARK 465 PRO A 5
REMARK 465 PRO A 318
REMARK 465 GLU A 319
REMARK 465 GLU A 320
REMARK 465 ALA A 321
REMARK 465 GLU A 322
REMARK 465 THR A 323
REMARK 465 VAL A 324
REMARK 465 LEU A 325
REMARK 465 GLU A 326
REMARK 465 HIS A 327
REMARK 465 HIS A 328
REMARK 465 HIS A 329
REMARK 465 HIS A 330
REMARK 465 HIS A 331
REMARK 465 HIS A 332
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 GLN A 34 82.04 -153.57
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 403
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 404
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 405
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NMN A 401
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3BA A 501
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 602
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC8
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 603
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 3BA8 RELATED DB: PDB
REMARK 900 RELATED ID: 3BA9 RELATED DB: PDB
REMARK 900 RELATED ID: 3BAB RELATED DB: PDB
DBREF 3BAA A 1 324 UNP Q837V6 Q837V6_ENTFA 1 324
SEQADV 3BAA LEU A 325 UNP Q837V6 EXPRESSION TAG
SEQADV 3BAA GLU A 326 UNP Q837V6 EXPRESSION TAG
SEQADV 3BAA HIS A 327 UNP Q837V6 EXPRESSION TAG
SEQADV 3BAA HIS A 328 UNP Q837V6 EXPRESSION TAG
SEQADV 3BAA HIS A 329 UNP Q837V6 EXPRESSION TAG
SEQADV 3BAA HIS A 330 UNP Q837V6 EXPRESSION TAG
SEQADV 3BAA HIS A 331 UNP Q837V6 EXPRESSION TAG
SEQADV 3BAA HIS A 332 UNP Q837V6 EXPRESSION TAG
SEQRES 1 A 332 MET GLU GLN GLN PRO LEU THR LEU THR ALA ALA THR THR
SEQRES 2 A 332 ARG ALA GLN GLU LEU ARG LYS GLN LEU ASN GLN TYR SER
SEQRES 3 A 332 HIS GLU TYR TYR VAL LYS ASP GLN PRO SER VAL GLU ASP
SEQRES 4 A 332 TYR VAL TYR ASP ARG LEU TYR LYS GLU LEU VAL ASP ILE
SEQRES 5 A 332 GLU THR GLU PHE PRO ASP LEU ILE THR PRO ASP SER PRO
SEQRES 6 A 332 THR GLN ARG VAL GLY GLY LYS VAL LEU SER GLY PHE GLU
SEQRES 7 A 332 LYS ALA PRO HIS ASP ILE PRO MET TYR SER LEU ASN ASP
SEQRES 8 A 332 GLY PHE SER LYS GLU ASP ILE PHE ALA PHE ASP GLU ARG
SEQRES 9 A 332 VAL ARG LYS ALA ILE GLY LYS PRO VAL ALA TYR CYS CYS
SEQRES 10 A 332 GLU LEU LYS ILE ASP GLY LEU ALA ILE SER LEU ARG TYR
SEQRES 11 A 332 GLU ASN GLY VAL PHE VAL ARG GLY ALA THR ARG GLY ASP
SEQRES 12 A 332 GLY THR VAL GLY GLU ASN ILE THR GLU ASN LEU ARG THR
SEQRES 13 A 332 VAL ARG SER VAL PRO MET ARG LEU THR GLU PRO ILE SER
SEQRES 14 A 332 VAL GLU VAL ARG GLY GLU CYS TYR MET PRO LYS GLN SER
SEQRES 15 A 332 PHE VAL ALA LEU ASN GLU GLU ARG GLU GLU ASN GLY GLN
SEQRES 16 A 332 ASP ILE PHE ALA ASN PRO ARG ASN ALA ALA ALA GLY SER
SEQRES 17 A 332 LEU ARG GLN LEU ASP THR LYS ILE VAL ALA LYS ARG ASN
SEQRES 18 A 332 LEU ASN THR PHE LEU TYR THR VAL ALA ASP PHE GLY PRO
SEQRES 19 A 332 MET LYS ALA LYS THR GLN PHE GLU ALA LEU GLU GLU LEU
SEQRES 20 A 332 SER ALA ILE GLY PHE ARG THR ASN PRO GLU ARG GLN LEU
SEQRES 21 A 332 CYS GLN SER ILE ASP GLU VAL TRP ALA TYR ILE GLU GLU
SEQRES 22 A 332 TYR HIS GLU LYS ARG SER THR LEU PRO TYR GLU ILE ASP
SEQRES 23 A 332 GLY ILE VAL ILE LYS VAL ASN GLU PHE ALA LEU GLN ASP
SEQRES 24 A 332 GLU LEU GLY PHE THR VAL LYS ALA PRO ARG TRP ALA ILE
SEQRES 25 A 332 ALA TYR LYS PHE PRO PRO GLU GLU ALA GLU THR VAL LEU
SEQRES 26 A 332 GLU HIS HIS HIS HIS HIS HIS
HET SO4 A 402 5
HET SO4 A 403 5
HET SO4 A 404 5
HET SO4 A 405 5
HET NMN A 401 22
HET 3BA A 501 26
HET GOL A 602 6
HET GOL A 603 6
HETNAM SO4 SULFATE ION
HETNAM NMN BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE
HETNAM 3BA 7-AMINO-2-TERT-BUTYL-4-{[2-(1H-IMIDAZOL-4-YL)
HETNAM 2 3BA ETHYL]AMINO}PYRIDO[2,3-D]PYRIMIDINE-6-CARBOXAMIDE
HETNAM GOL GLYCEROL
HETSYN NMN NICOTINAMIDE MONONUCLEOTIDE
HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL
FORMUL 2 SO4 4(O4 S 2-)
FORMUL 6 NMN C11 H16 N2 O8 P 1+
FORMUL 7 3BA C17 H22 N8 O
FORMUL 8 GOL 2(C3 H8 O3)
FORMUL 10 HOH *269(H2 O)
HELIX 1 1 THR A 7 VAL A 31 1 25
HELIX 2 2 GLU A 38 PHE A 56 1 19
HELIX 3 3 PRO A 57 ILE A 60 5 4
HELIX 4 4 SER A 64 GLY A 70 5 7
HELIX 5 5 SER A 94 GLY A 110 1 17
HELIX 6 6 ILE A 150 ARG A 155 1 6
HELIX 7 7 PRO A 179 ASN A 193 1 15
HELIX 8 8 ASN A 200 LEU A 209 1 10
HELIX 9 9 ASP A 213 ALA A 218 1 6
HELIX 10 10 THR A 239 GLY A 251 1 13
HELIX 11 11 SER A 263 ARG A 278 1 16
HELIX 12 12 SER A 279 LEU A 281 5 3
HELIX 13 13 GLU A 294 GLY A 302 1 9
SHEET 1 A 2 LYS A 79 PRO A 81 0
SHEET 2 A 2 VAL A 146 GLU A 148 -1 O GLY A 147 N ALA A 80
SHEET 1 B 5 ASP A 91 GLY A 92 0
SHEET 2 B 5 ALA A 311 LYS A 315 1 O LYS A 315 N GLY A 92
SHEET 3 B 5 ILE A 285 VAL A 292 -1 N ILE A 290 O ILE A 312
SHEET 4 B 5 TYR A 115 ILE A 121 -1 N GLU A 118 O VAL A 289
SHEET 5 B 5 GLN A 259 CYS A 261 -1 O CYS A 261 N TYR A 115
SHEET 1 C 4 VAL A 134 THR A 140 0
SHEET 2 C 4 LEU A 124 GLU A 131 -1 N ARG A 129 O ARG A 137
SHEET 3 C 4 VAL A 170 TYR A 177 -1 O VAL A 172 N LEU A 128
SHEET 4 C 4 ASN A 223 VAL A 229 -1 O ASN A 223 N TYR A 177
SITE 1 AC1 5 LYS A 120 GLU A 175 3BA A 501 HOH A 802
SITE 2 AC1 5 HOH A 840
SITE 1 AC2 5 PRO A 81 ARG A 129 ARG A 137 HOH A 647
SITE 2 AC2 5 HOH A 832
SITE 1 AC3 6 ARG A 190 GLN A 195 GLN A 211 ARG A 220
SITE 2 AC3 6 HOH A 792 HOH A 863
SITE 1 AC4 3 GLN A 24 HIS A 27 LYS A 32
SITE 1 AC5 13 TYR A 25 TYR A 29 TYR A 30 VAL A 37
SITE 2 AC5 13 ASP A 39 TYR A 42 ASP A 43 ARG A 158
SITE 3 AC5 13 HOH A 622 HOH A 658 HOH A 703 HOH A 734
SITE 4 AC5 13 HOH A 785
SITE 1 AC6 13 TYR A 87 LEU A 89 GLU A 118 LEU A 119
SITE 2 AC6 13 LYS A 120 ILE A 121 GLU A 175 TYR A 227
SITE 3 AC6 13 VAL A 289 LYS A 291 TRP A 310 SO4 A 402
SITE 4 AC6 13 GOL A 603
SITE 1 AC7 5 PHE A 101 ARG A 104 ARG A 309 HOH A 684
SITE 2 AC7 5 HOH A 806
SITE 1 AC8 7 PRO A 85 MET A 86 TYR A 87 ARG A 173
SITE 2 AC8 7 PHE A 303 3BA A 501 HOH A 872
CRYST1 90.494 86.363 56.833 90.00 101.10 90.00 C 1 2 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.011050 0.000000 0.002168 0.00000
SCALE2 0.000000 0.011579 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017931 0.00000