HEADER HYDROLASE 09-NOV-07 3BB7 TITLE STRUCTURE OF PREVOTELLA INTERMEDIA PROINTERPAIN A FRAGMENT 39-359 TITLE 2 (MUTANT C154A) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERPAIN A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 84-403; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PREVOTELLA INTERMEDIA; SOURCE 3 ORGANISM_TAXID: 28131; SOURCE 4 GENE: PIN0048; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24D(+) KEYWDS CYSTEINE PROTEASE, ZYMOGEN ACTIVATION, BACTERIAL ODONTOPATHOGEN, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.MALLORQUI-FERNANDEZ,S.P.MANANDHAR,G.MALLORQUI-FERNANDEZ,I.USON, AUTHOR 2 K.WAWRZONEK,T.KANTYKA,M.SOLA,I.B.THOGERSEN,J.J.ENGHILD,J.POTEMPA, AUTHOR 3 F.X.GOMIS-RUTH REVDAT 6 01-NOV-23 3BB7 1 SEQADV REVDAT 5 18-MAY-11 3BB7 1 REMARK REVDAT 4 24-FEB-09 3BB7 1 VERSN REVDAT 3 19-FEB-08 3BB7 1 COMPND REMARK DBREF SEQADV REVDAT 2 12-FEB-08 3BB7 1 JRNL REMARK REVDAT 1 20-NOV-07 3BB7 0 JRNL AUTH N.MALLORQUI-FERNANDEZ,S.P.MANANDHAR,G.MALLORQUI-FERNANDEZ, JRNL AUTH 2 I.USON,K.WAWRZONEK,T.KANTYKA,M.SOLA,I.B.THOGERSEN, JRNL AUTH 3 J.J.ENGHILD,J.POTEMPA,F.X.GOMIS-RUTH JRNL TITL A NEW AUTOCATALYTIC ACTIVATION MECHANISM FOR CYSTEINE JRNL TITL 2 PROTEASES REVEALED BY PREVOTELLA INTERMEDIA INTERPAIN A JRNL REF J.BIOL.CHEM. V. 283 2871 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 17993455 JRNL DOI 10.1074/JBC.M708481200 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.07 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 48630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.500 REMARK 3 FREE R VALUE TEST SET COUNT : 747 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3375 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.1670 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2428 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : 0.42000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.22000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.070 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.412 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2516 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3428 ; 1.399 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 312 ; 5.266 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;37.017 ;24.914 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 387 ;13.159 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;16.445 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 370 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1950 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1198 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1750 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 266 ; 0.148 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 44 ; 0.227 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.175 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1587 ; 1.360 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2504 ; 1.986 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1086 ; 2.803 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 924 ; 3.877 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2673 ; 1.570 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2452 ; 2.926 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 294 REMARK 3 RESIDUE RANGE : A 302 A 359 REMARK 3 ORIGIN FOR THE GROUP (A): -10.0270 -1.9500 16.1360 REMARK 3 T TENSOR REMARK 3 T11: -0.0105 T22: -0.0519 REMARK 3 T33: -0.0473 T12: -0.0016 REMARK 3 T13: -0.0014 T23: 0.0114 REMARK 3 L TENSOR REMARK 3 L11: 0.4828 L22: 0.2159 REMARK 3 L33: 0.3319 L12: -0.0459 REMARK 3 L13: 0.0971 L23: -0.0006 REMARK 3 S TENSOR REMARK 3 S11: 0.0160 S12: -0.0575 S13: -0.0201 REMARK 3 S21: 0.0271 S22: 0.0140 S23: 0.0031 REMARK 3 S31: 0.0082 S32: 0.0002 S33: -0.0300 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 294 REMARK 3 RESIDUE RANGE : A 302 A 359 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7370 -1.9440 16.2700 REMARK 3 T TENSOR REMARK 3 T11: -0.0008 T22: -0.0360 REMARK 3 T33: -0.0371 T12: -0.0019 REMARK 3 T13: 0.0003 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.5958 L22: 0.2453 REMARK 3 L33: 0.3858 L12: -0.0100 REMARK 3 L13: 0.1530 L23: 0.0201 REMARK 3 S TENSOR REMARK 3 S11: 0.0095 S12: -0.0598 S13: -0.0255 REMARK 3 S21: 0.0332 S22: 0.0143 S23: 0.0052 REMARK 3 S31: 0.0105 S32: 0.0100 S33: -0.0239 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 501 A 870 REMARK 3 ORIGIN FOR THE GROUP (A): -12.0040 -2.3500 13.8240 REMARK 3 T TENSOR REMARK 3 T11: 0.0392 T22: -0.0060 REMARK 3 T33: 0.0177 T12: 0.0015 REMARK 3 T13: 0.0030 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.7352 L22: 0.2175 REMARK 3 L33: 0.5822 L12: 0.0109 REMARK 3 L13: 0.1995 L23: 0.0716 REMARK 3 S TENSOR REMARK 3 S11: 0.0268 S12: -0.0257 S13: -0.0055 REMARK 3 S21: 0.0400 S22: 0.0033 S23: 0.0034 REMARK 3 S31: -0.0034 S32: 0.0018 S33: -0.0301 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: TLS GROUP 1 CORRESPONDS TO CHAIN A MAIN REMARK 3 CHAIN ATOMS; TLS GROUP 2 CORRESPONDS TO CHAIN A SIDE CHAIN ATOMS. REMARK 4 REMARK 4 3BB7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045307. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-SEP-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49377 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 39.070 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.40900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1DKI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% POLYETHYLENE GLYCOL 3000, 0.2M REMARK 280 MAGNESIUM CHLORIDE, 0.1M SODIUM CACODYLATE, PH6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.43500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.40500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.43500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.40500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 295 REMARK 465 PRO A 296 REMARK 465 GLY A 297 REMARK 465 SER A 298 REMARK 465 MET A 299 REMARK 465 GLY A 300 REMARK 465 GLN A 301 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 102 O HOH A 826 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 820 O HOH A 823 2556 2.12 REMARK 500 OD1 ASP A 68 OE1 GLU A 123 4546 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 86 98.12 -27.78 REMARK 500 THR A 126 114.87 -25.80 REMARK 500 GLN A 135 -149.10 -106.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BBA RELATED DB: PDB REMARK 900 ACTIVE WILD-TYPE OF THE SAME PROTEIN DBREF 3BB7 A 40 359 UNP A9J7N5 A9J7N5_PREIN 84 403 SEQADV 3BB7 ALA A 39 UNP A9J7N5 EXPRESSION TAG SEQADV 3BB7 SER A 106 UNP A9J7N5 ASN 150 CONFLICT SEQADV 3BB7 ASN A 111 UNP A9J7N5 SER 155 CONFLICT SEQADV 3BB7 LYS A 144 UNP A9J7N5 ASN 188 CONFLICT SEQADV 3BB7 ALA A 154 UNP A9J7N5 CYS 198 ENGINEERED MUTATION SEQADV 3BB7 VAL A 162 UNP A9J7N5 ALA 206 CONFLICT SEQADV 3BB7 ASN A 207 UNP A9J7N5 ASP 251 CONFLICT SEQADV 3BB7 ASN A 269 UNP A9J7N5 ASP 313 CONFLICT SEQRES 1 A 321 ALA ASN GLN LEU ARG GLU LEU LYS GLN THR HIS THR TYR SEQRES 2 A 321 THR VAL PHE GLY TYR THR ASP GLY GLY PHE ALA VAL ILE SEQRES 3 A 321 SER ALA ASP ASP LEU ALA PRO GLU LEU LEU GLY VAL SER SEQRES 4 A 321 GLU SER ASN PHE VAL GLU THR ASP ASN PRO SER PHE LYS SEQRES 5 A 321 TRP TRP LEU LYS ALA ILE ASP GLU VAL ILE THR ASN ALA SEQRES 6 A 321 VAL LYS SER ASN LYS PRO LEU ASN VAL ILE LYS PRO ASP SEQRES 7 A 321 PRO SER LYS TYR ALA ALA GLU VAL SER THR LEU LEU THR SEQRES 8 A 321 THR THR TRP GLY GLN GLN MET PRO TYR ASN LYS LEU LEU SEQRES 9 A 321 PRO LYS THR LYS LYS GLY ARG LEU ILE THR GLY ALA VAL SEQRES 10 A 321 ALA THR ALA THR ALA GLN VAL LEU ASN TYR PHE LYS TYR SEQRES 11 A 321 PRO VAL ARG GLY ILE GLY SER HIS THR VAL HIS TYR PRO SEQRES 12 A 321 ALA ASN ASP PRO SER GLY VAL ALA ILE SER ALA ASP PHE SEQRES 13 A 321 GLY ASN THR THR TYR ASP TRP ALA ASN MET LYS ASP ASN SEQRES 14 A 321 TYR SER GLY ASN TYR THR GLU ALA GLU ALA ASN ALA VAL SEQRES 15 A 321 ALA THR LEU MET LEU HIS CYS GLY VAL ALA SER GLU MET SEQRES 16 A 321 GLN TYR GLY GLY PRO ASN GLU GLY SER GLY ALA TYR MET SEQRES 17 A 321 THR ASP CYS ALA ALA GLY LEU ARG THR TYR PHE GLY PHE SEQRES 18 A 321 THR ASP ALA GLU TYR ILE THR ARG ALA ASN TYR THR ASP SEQRES 19 A 321 GLU GLN TRP MET ASP ILE VAL PHE SER GLU LEU THR LYS SEQRES 20 A 321 GLY HIS PRO LEU ILE TYR GLY GLY VAL SER PRO GLY SER SEQRES 21 A 321 MET GLY GLN ASP ALA GLY HIS ALA PHE VAL ILE ASP GLY SEQRES 22 A 321 TYR ASN LYS ALA GLY LEU VAL SER VAL ASN TRP GLY TRP SEQRES 23 A 321 ASN GLY ASP VAL ASP GLY TYR TYR LYS ILE ASP LEU LEU SEQRES 24 A 321 ASN PRO GLY ASN MET TYR SER PHE THR ALA GLU GLN ASP SEQRES 25 A 321 MET VAL ARG GLY VAL TYR GLY LYS PRO FORMUL 2 HOH *370(H2 O) HELIX 1 1 ASN A 86 ASN A 107 1 22 HELIX 2 2 GLY A 153 LYS A 167 1 15 HELIX 3 3 ASP A 193 THR A 197 5 5 HELIX 4 4 ASP A 200 MET A 204 5 5 HELIX 5 5 THR A 213 SER A 231 1 19 HELIX 6 6 TYR A 245 PHE A 257 1 13 HELIX 7 7 ALA A 268 TYR A 270 5 3 HELIX 8 8 THR A 271 LYS A 285 1 15 SHEET 1 A10 LEU A 42 GLN A 47 0 SHEET 2 A10 THR A 52 TYR A 56 -1 O GLY A 55 N ARG A 43 SHEET 3 A10 PHE A 61 ILE A 64 -1 O ALA A 62 N PHE A 54 SHEET 4 A10 LEU A 73 SER A 77 -1 O LEU A 74 N VAL A 63 SHEET 5 A10 GLY A 330 TYR A 332 -1 O TYR A 331 N VAL A 76 SHEET 6 A10 VAL A 318 ASN A 321 -1 N VAL A 320 O GLY A 330 SHEET 7 A10 HIS A 305 TYR A 312 -1 N VAL A 308 O ASN A 321 SHEET 8 A10 LEU A 289 GLY A 293 -1 N TYR A 291 O PHE A 307 SHEET 9 A10 ASP A 350 ARG A 353 -1 O ASP A 350 N GLY A 292 SHEET 10 A10 GLU A 263 THR A 266 -1 N GLU A 263 O ARG A 353 SHEET 1 B 2 HIS A 176 TYR A 180 0 SHEET 2 B 2 VAL A 188 ALA A 192 -1 O ILE A 190 N VAL A 178 CISPEP 1 MET A 136 PRO A 137 0 0.05 CISPEP 2 TYR A 168 PRO A 169 0 3.29 CISPEP 3 TYR A 180 PRO A 181 0 -0.23 CRYST1 128.870 38.810 78.140 90.00 127.26 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007760 0.000000 0.005903 0.00000 SCALE2 0.000000 0.025767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016079 0.00000