HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 26-NOV-07 3BGH TITLE CRYSTAL STRUCTURE OF PUTATIVE NEURAMINYLLACTOSE-BINDING HEMAGGLUTININ TITLE 2 HOMOLOG FROM HELICOBACTER PYLORI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE NEURAMINYLLACTOSE-BINDING HEMAGGLUTININ HOMOLOG; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 25-249; COMPND 5 SYNONYM: PROTEIN HPAA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 85962; SOURCE 4 STRAIN: 26695; SOURCE 5 ATCC: 700392; SOURCE 6 GENE: HP_0410; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_VECTOR: PET; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET26 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, KEYWDS 3 NYSGXRC EXPDTA X-RAY DIFFRACTION AUTHOR J.B.BONANNO,J.DICKEY,K.T.BAIN,C.MCKENZIE,R.ROMERO,D.SMITH, AUTHOR 2 S.WASSERMAN,J.M.SAUDER,S.K.BURLEY,S.C.ALMO,NEW YORK SGX RESEARCH AUTHOR 3 CENTER FOR STRUCTURAL GENOMICS (NYSGXRC) REVDAT 7 21-FEB-24 3BGH 1 REMARK REVDAT 6 03-FEB-21 3BGH 1 AUTHOR JRNL REMARK SEQADV REVDAT 5 14-NOV-18 3BGH 1 AUTHOR REVDAT 4 25-OCT-17 3BGH 1 REMARK REVDAT 3 13-JUL-11 3BGH 1 VERSN REVDAT 2 24-FEB-09 3BGH 1 VERSN REVDAT 1 11-DEC-07 3BGH 0 JRNL AUTH J.B.BONANNO,J.DICKEY,K.T.BAIN,C.MCKENZIE,R.ROMERO,D.SMITH, JRNL AUTH 2 S.WASSERMAN,J.M.SAUDER,S.K.BURLEY,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE NEURAMINYLLACTOSE-BINDING JRNL TITL 2 HEMAGGLUTININ HOMOLOG FROM HELICOBACTER PYLORI. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20582 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1057 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.51 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1393 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2580 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3043 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 25 REMARK 3 SOLVENT ATOMS : 26 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 62.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.20000 REMARK 3 B22 (A**2) : -0.20000 REMARK 3 B33 (A**2) : 0.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.387 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.277 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.227 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.544 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3116 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4182 ; 1.548 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 369 ; 6.812 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 145 ;40.103 ;25.655 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 635 ;20.068 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 9 ;18.127 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 465 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2241 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1214 ; 0.224 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2066 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 96 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 31 ; 0.227 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.182 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1923 ; 0.942 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3036 ; 1.594 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1318 ; 2.319 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1146 ; 3.630 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BGH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-NOV-07. REMARK 100 THE DEPOSITION ID IS D_1000045490. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : DIAMOND REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20647 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 34.020 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : 0.10400 REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.00 REMARK 200 R MERGE FOR SHELL (I) : 0.79800 REMARK 200 R SYM FOR SHELL (I) : 0.79800 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BIS-TRIS PH 5.5, 25% PEG 3350, REMARK 280 200MM LITHIUM SULFATE, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.75450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.75400 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.75400 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.37725 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.75400 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.75400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 133.13175 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.75400 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.75400 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.37725 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.75400 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.75400 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 133.13175 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 88.75450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE DIMERIC ASSEMBLY OF THE BIOLOGICAL REMARK 300 UNIT THAT IS SHOWN IN REMARK 350 IS PUTATIVE AT THE TIME OF REMARK 300 DEPOSITION. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1870 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6940 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 88.75450 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 22 REMARK 465 SER A 23 REMARK 465 LEU A 24 REMARK 465 ASP A 25 REMARK 465 GLY A 26 REMARK 465 MET A 27 REMARK 465 PRO A 28 REMARK 465 ALA A 29 REMARK 465 LYS A 30 REMARK 465 GLN A 31 REMARK 465 GLN A 32 REMARK 465 HIS A 33 REMARK 465 ASN A 34 REMARK 465 ASN A 35 REMARK 465 THR A 36 REMARK 465 GLY A 37 REMARK 465 GLU A 38 REMARK 465 SER A 39 REMARK 465 GLU A 184 REMARK 465 LEU A 185 REMARK 465 ARG A 186 REMARK 465 ARG A 187 REMARK 465 THR A 188 REMARK 465 ASN A 189 REMARK 465 SER A 190 REMARK 465 GLY A 191 REMARK 465 GLY A 192 REMARK 465 PHE A 193 REMARK 465 VAL A 194 REMARK 465 PRO A 195 REMARK 465 LYS A 196 REMARK 465 THR A 197 REMARK 465 PHE A 198 REMARK 465 VAL A 199 REMARK 465 HIS A 200 REMARK 465 ARG A 201 REMARK 465 ILE A 202 REMARK 465 LYS A 246 REMARK 465 LYS A 247 REMARK 465 ARG A 248 REMARK 465 LYS A 249 REMARK 465 GLU A 250 REMARK 465 GLY A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 HIS A 254 REMARK 465 HIS A 255 REMARK 465 HIS A 256 REMARK 465 HIS A 257 REMARK 465 MET B 22 REMARK 465 SER B 23 REMARK 465 LEU B 24 REMARK 465 ASP B 25 REMARK 465 GLY B 26 REMARK 465 MET B 27 REMARK 465 PRO B 28 REMARK 465 ALA B 29 REMARK 465 LYS B 30 REMARK 465 GLN B 31 REMARK 465 GLN B 32 REMARK 465 HIS B 33 REMARK 465 ASN B 34 REMARK 465 ASN B 35 REMARK 465 THR B 36 REMARK 465 GLY B 37 REMARK 465 GLU B 38 REMARK 465 SER B 39 REMARK 465 VAL B 40 REMARK 465 GLU B 41 REMARK 465 LEU B 185 REMARK 465 ARG B 186 REMARK 465 ARG B 187 REMARK 465 THR B 188 REMARK 465 ASN B 189 REMARK 465 SER B 190 REMARK 465 GLY B 191 REMARK 465 GLY B 192 REMARK 465 PHE B 193 REMARK 465 VAL B 194 REMARK 465 PRO B 195 REMARK 465 LYS B 196 REMARK 465 THR B 197 REMARK 465 PHE B 198 REMARK 465 VAL B 199 REMARK 465 SER B 243 REMARK 465 GLU B 244 REMARK 465 MET B 245 REMARK 465 LYS B 246 REMARK 465 LYS B 247 REMARK 465 ARG B 248 REMARK 465 LYS B 249 REMARK 465 GLU B 250 REMARK 465 GLY B 251 REMARK 465 HIS B 252 REMARK 465 HIS B 253 REMARK 465 HIS B 254 REMARK 465 HIS B 255 REMARK 465 HIS B 256 REMARK 465 HIS B 257 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 55 106.30 -51.63 REMARK 500 SER A 57 -11.14 89.96 REMARK 500 ARG A 95 -4.52 -53.85 REMARK 500 TYR A 152 132.57 -175.00 REMARK 500 GLU A 204 -78.77 -48.64 REMARK 500 THR A 205 -153.10 -125.23 REMARK 500 LEU A 230 43.62 -99.26 REMARK 500 LYS B 49 64.97 -114.30 REMARK 500 ALA B 106 -8.25 -59.89 REMARK 500 GLU B 108 -76.38 -38.52 REMARK 500 ILE B 109 98.02 1.81 REMARK 500 ASP B 132 61.53 63.43 REMARK 500 LEU B 230 48.05 -87.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-10226A RELATED DB: TARGETDB DBREF 3BGH A 25 249 UNP O25166 O25166_HELPY 25 249 DBREF 3BGH B 25 249 UNP O25166 O25166_HELPY 25 249 SEQADV 3BGH MET A 22 UNP O25166 EXPRESSION TAG SEQADV 3BGH SER A 23 UNP O25166 EXPRESSION TAG SEQADV 3BGH LEU A 24 UNP O25166 EXPRESSION TAG SEQADV 3BGH GLU A 250 UNP O25166 EXPRESSION TAG SEQADV 3BGH GLY A 251 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS A 252 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS A 253 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS A 254 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS A 255 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS A 256 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS A 257 UNP O25166 EXPRESSION TAG SEQADV 3BGH MET B 22 UNP O25166 EXPRESSION TAG SEQADV 3BGH SER B 23 UNP O25166 EXPRESSION TAG SEQADV 3BGH LEU B 24 UNP O25166 EXPRESSION TAG SEQADV 3BGH GLU B 250 UNP O25166 EXPRESSION TAG SEQADV 3BGH GLY B 251 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS B 252 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS B 253 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS B 254 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS B 255 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS B 256 UNP O25166 EXPRESSION TAG SEQADV 3BGH HIS B 257 UNP O25166 EXPRESSION TAG SEQRES 1 A 236 MET SER LEU ASP GLY MET PRO ALA LYS GLN GLN HIS ASN SEQRES 2 A 236 ASN THR GLY GLU SER VAL GLU LEU HIS PHE HIS TYR PRO SEQRES 3 A 236 ILE LYS GLY LYS GLN GLU PRO LYS ASN SER HIS LEU VAL SEQRES 4 A 236 VAL LEU ILE GLU PRO LYS ILE GLU ILE ASN LYS VAL ILE SEQRES 5 A 236 PRO GLU SER TYR GLN LYS GLU PHE GLU LYS SER LEU PHE SEQRES 6 A 236 LEU GLN LEU SER SER PHE LEU GLU ARG LYS GLY TYR SER SEQRES 7 A 236 VAL SER GLN PHE LYS ASP ALA SER GLU ILE PRO GLN ASP SEQRES 8 A 236 ILE LYS GLU LYS ALA LEU LEU VAL LEU ARG MET ASP GLY SEQRES 9 A 236 ASN VAL ALA ILE LEU GLU ASP ILE VAL GLU GLU SER ASP SEQRES 10 A 236 ALA LEU SER GLU GLU LYS VAL ILE ASP MET SER SER GLY SEQRES 11 A 236 TYR LEU ASN LEU ASN PHE VAL GLU PRO LYS SER GLU ASP SEQRES 12 A 236 ILE ILE HIS SER PHE GLY ILE ASP VAL SER LYS ILE LYS SEQRES 13 A 236 ALA VAL ILE GLU ARG VAL GLU LEU ARG ARG THR ASN SER SEQRES 14 A 236 GLY GLY PHE VAL PRO LYS THR PHE VAL HIS ARG ILE LYS SEQRES 15 A 236 GLU THR ASP HIS ASP GLN ALA ILE ARG LYS ILE MET ASN SEQRES 16 A 236 GLN ALA TYR HIS LYS VAL MET VAL HIS ILE THR LYS GLU SEQRES 17 A 236 LEU SER LYS LYS HIS MET GLU HIS TYR GLU LYS VAL SER SEQRES 18 A 236 SER GLU MET LYS LYS ARG LYS GLU GLY HIS HIS HIS HIS SEQRES 19 A 236 HIS HIS SEQRES 1 B 236 MET SER LEU ASP GLY MET PRO ALA LYS GLN GLN HIS ASN SEQRES 2 B 236 ASN THR GLY GLU SER VAL GLU LEU HIS PHE HIS TYR PRO SEQRES 3 B 236 ILE LYS GLY LYS GLN GLU PRO LYS ASN SER HIS LEU VAL SEQRES 4 B 236 VAL LEU ILE GLU PRO LYS ILE GLU ILE ASN LYS VAL ILE SEQRES 5 B 236 PRO GLU SER TYR GLN LYS GLU PHE GLU LYS SER LEU PHE SEQRES 6 B 236 LEU GLN LEU SER SER PHE LEU GLU ARG LYS GLY TYR SER SEQRES 7 B 236 VAL SER GLN PHE LYS ASP ALA SER GLU ILE PRO GLN ASP SEQRES 8 B 236 ILE LYS GLU LYS ALA LEU LEU VAL LEU ARG MET ASP GLY SEQRES 9 B 236 ASN VAL ALA ILE LEU GLU ASP ILE VAL GLU GLU SER ASP SEQRES 10 B 236 ALA LEU SER GLU GLU LYS VAL ILE ASP MET SER SER GLY SEQRES 11 B 236 TYR LEU ASN LEU ASN PHE VAL GLU PRO LYS SER GLU ASP SEQRES 12 B 236 ILE ILE HIS SER PHE GLY ILE ASP VAL SER LYS ILE LYS SEQRES 13 B 236 ALA VAL ILE GLU ARG VAL GLU LEU ARG ARG THR ASN SER SEQRES 14 B 236 GLY GLY PHE VAL PRO LYS THR PHE VAL HIS ARG ILE LYS SEQRES 15 B 236 GLU THR ASP HIS ASP GLN ALA ILE ARG LYS ILE MET ASN SEQRES 16 B 236 GLN ALA TYR HIS LYS VAL MET VAL HIS ILE THR LYS GLU SEQRES 17 B 236 LEU SER LYS LYS HIS MET GLU HIS TYR GLU LYS VAL SER SEQRES 18 B 236 SER GLU MET LYS LYS ARG LYS GLU GLY HIS HIS HIS HIS SEQRES 19 B 236 HIS HIS HET SO4 A 1 5 HET SO4 A 3 5 HET SO4 A 4 5 HET SO4 B 2 5 HET SO4 B 5 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 HOH *26(H2 O) HELIX 1 1 PRO A 74 ARG A 95 1 22 HELIX 2 2 ASP A 105 ILE A 109 5 5 HELIX 3 3 PRO A 110 ALA A 117 1 8 HELIX 4 4 ASP A 206 LEU A 230 1 25 HELIX 5 5 SER A 231 MET A 245 1 15 HELIX 6 6 PRO B 74 ARG B 95 1 22 HELIX 7 7 PRO B 110 ALA B 117 1 8 HELIX 8 8 ASP B 206 LEU B 230 1 25 HELIX 9 9 SER B 231 SER B 242 1 12 SHEET 1 A 4 LYS A 66 ILE A 69 0 SHEET 2 A 4 LEU A 119 GLU A 135 1 O MET A 123 N LYS A 66 SHEET 3 A 4 LYS A 144 VAL A 158 -1 O ILE A 146 N ILE A 133 SHEET 4 A 4 ILE A 165 ASP A 172 -1 O ILE A 171 N LEU A 153 SHEET 1 B 5 SER A 99 PHE A 103 0 SHEET 2 B 5 LEU A 59 ILE A 63 1 N LEU A 62 O SER A 101 SHEET 3 B 5 LEU A 119 GLU A 135 1 O LEU A 121 N VAL A 61 SHEET 4 B 5 LYS A 144 VAL A 158 -1 O ILE A 146 N ILE A 133 SHEET 5 B 5 LYS A 177 ARG A 182 -1 O GLU A 181 N VAL A 145 SHEET 1 C 5 SER B 99 PHE B 103 0 SHEET 2 C 5 LEU B 59 ILE B 69 1 N VAL B 60 O SER B 99 SHEET 3 C 5 LEU B 119 GLU B 135 1 O LEU B 121 N VAL B 61 SHEET 4 C 5 LYS B 144 VAL B 158 -1 O ASN B 156 N ARG B 122 SHEET 5 C 5 ILE B 165 ASP B 172 -1 O ILE B 166 N PHE B 157 SHEET 1 D 6 SER B 99 PHE B 103 0 SHEET 2 D 6 LEU B 59 ILE B 69 1 N VAL B 60 O SER B 99 SHEET 3 D 6 LEU B 119 GLU B 135 1 O LEU B 121 N VAL B 61 SHEET 4 D 6 LYS B 144 VAL B 158 -1 O ASN B 156 N ARG B 122 SHEET 5 D 6 LYS B 177 ARG B 182 -1 O ILE B 180 N VAL B 145 SHEET 6 D 6 ILE B 202 LYS B 203 -1 O ILE B 202 N ARG B 182 SITE 1 AC1 4 LYS A 96 SER A 231 LYS A 232 HOH A 267 SITE 1 AC2 3 LYS B 96 SER B 231 LYS B 232 SITE 1 AC3 4 LYS A 233 HIS A 234 SER B 141 LYS B 144 SITE 1 AC4 5 SER A 141 LYS A 144 ARG A 182 LYS B 233 SITE 2 AC4 5 HIS B 234 SITE 1 AC5 3 LYS B 221 HIS B 225 HOH B 266 CRYST1 77.508 77.508 177.509 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012902 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012902 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005634 0.00000