HEADER TRANSFERASE 02-DEC-07 3BIY TITLE CRYSTAL STRUCTURE OF P300 HISTONE ACETYLTRANSFERASE DOMAIN IN COMPLEX TITLE 2 WITH A BISUBSTRATE INHIBITOR, LYS-COA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE P300; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ACETYLTRANSFERASE DOMAIN; COMPND 5 SYNONYM: E1A-ASSOCIATED PROTEIN P300; COMPND 6 EC: 2.3.1.48; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EP300, P300; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-CODONPLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTYB2 KEYWDS P300 HAT, BISUBSTRATE INHIBITOR, PROTEIN-INHIBITOR COMPLEX, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.LIU,L.WANG,K.ZHAO,P.R.THOMPSON,Y.HWANG,R.MARMORSTEIN,P.A.COLE REVDAT 7 21-FEB-24 3BIY 1 REMARK REVDAT 6 20-OCT-21 3BIY 1 REMARK SEQADV REVDAT 5 25-OCT-17 3BIY 1 REMARK REVDAT 4 13-JUL-11 3BIY 1 VERSN REVDAT 3 24-FEB-09 3BIY 1 VERSN REVDAT 2 22-JUL-08 3BIY 1 JRNL SITE REVDAT 1 12-FEB-08 3BIY 0 JRNL AUTH X.LIU,L.WANG,K.ZHAO,P.R.THOMPSON,Y.HWANG,R.MARMORSTEIN, JRNL AUTH 2 P.A.COLE JRNL TITL THE STRUCTURAL BASIS OF PROTEIN ACETYLATION BY THE P300/CBP JRNL TITL 2 TRANSCRIPTIONAL COACTIVATOR JRNL REF NATURE V. 451 846 2008 JRNL REFN ISSN 0028-0836 JRNL PMID 18273021 JRNL DOI 10.1038/NATURE06546 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 37202 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1980 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2451 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2030 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2589 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.107 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.063 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.645 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2728 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3697 ; 1.411 ; 1.985 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 315 ; 5.614 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 131 ;31.413 ;23.130 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 459 ;13.360 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;17.215 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 388 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2089 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1241 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1875 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 205 ; 0.134 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.221 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.128 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1636 ; 0.882 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2594 ; 1.349 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1232 ; 2.418 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1103 ; 3.701 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1287 A 1664 REMARK 3 ORIGIN FOR THE GROUP (A): -8.3210 25.3990 1.3670 REMARK 3 T TENSOR REMARK 3 T11: -0.0132 T22: -0.0818 REMARK 3 T33: -0.0069 T12: 0.0061 REMARK 3 T13: -0.0488 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.9633 L22: 0.6807 REMARK 3 L33: 1.8268 L12: -0.0300 REMARK 3 L13: 0.4925 L23: -0.0169 REMARK 3 S TENSOR REMARK 3 S11: -0.1318 S12: -0.1008 S13: 0.1716 REMARK 3 S21: 0.0111 S22: -0.0177 S23: -0.0398 REMARK 3 S31: -0.3101 S32: -0.0658 S33: 0.1495 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 700 A 700 REMARK 3 ORIGIN FOR THE GROUP (A): -17.6290 15.9620 1.4740 REMARK 3 T TENSOR REMARK 3 T11: -0.0582 T22: -0.0268 REMARK 3 T33: -0.0512 T12: 0.0071 REMARK 3 T13: 0.0007 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 3.2685 L22: 2.7185 REMARK 3 L33: 3.1262 L12: 0.3767 REMARK 3 L13: 0.4704 L23: 0.7057 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: -0.0679 S13: -0.0545 REMARK 3 S21: -0.0328 S22: -0.1100 S23: 0.1084 REMARK 3 S31: -0.1217 S32: -0.2960 S33: 0.1556 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3BIY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-07. REMARK 100 THE DEPOSITION ID IS D_1000045577. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-06; NULL REMARK 200 TEMPERATURE (KELVIN) : 93; NULL REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; NULL REMARK 200 RADIATION SOURCE : NSLS; NULL REMARK 200 BEAMLINE : X6A; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786, 0.9789, 0.9287, 0.9193, REMARK 200 0.9253; NULL REMARK 200 MONOCHROMATOR : SI(111) CHANNEL CUT REMARK 200 MONOCHROMATOR; SI(111) CHANNEL REMARK 200 CUT MONOCHROMATOR REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41358 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.76 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.65800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES SODIUM PH 7.5, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 4,000, 10% V/V 2-PROPANOL , VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.57650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.86475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.28825 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 1520 REMARK 465 GLU A 1521 REMARK 465 GLN A 1522 REMARK 465 GLU A 1523 REMARK 465 GLU A 1524 REMARK 465 GLU A 1525 REMARK 465 GLU A 1526 REMARK 465 ARG A 1527 REMARK 465 LYS A 1528 REMARK 465 ARG A 1529 REMARK 465 GLU A 1530 REMARK 465 GLU A 1531 REMARK 465 ASN A 1532 REMARK 465 THR A 1533 REMARK 465 SER A 1534 REMARK 465 ASN A 1535 REMARK 465 GLU A 1536 REMARK 465 SER A 1537 REMARK 465 THR A 1538 REMARK 465 ASP A 1539 REMARK 465 VAL A 1540 REMARK 465 THR A 1541 REMARK 465 LYS A 1542 REMARK 465 GLY A 1543 REMARK 465 ASP A 1544 REMARK 465 SER A 1545 REMARK 465 LYS A 1546 REMARK 465 ASN A 1547 REMARK 465 ALA A 1548 REMARK 465 LYS A 1549 REMARK 465 LYS A 1550 REMARK 465 LYS A 1551 REMARK 465 ASN A 1552 REMARK 465 ASN A 1553 REMARK 465 LYS A 1554 REMARK 465 LYS A 1555 REMARK 465 THR A 1556 REMARK 465 SER A 1557 REMARK 465 LYS A 1558 REMARK 465 ASN A 1559 REMARK 465 LYS A 1560 REMARK 465 SER A 1561 REMARK 465 SER A 1562 REMARK 465 LEU A 1563 REMARK 465 SER A 1564 REMARK 465 ARG A 1565 REMARK 465 GLY A 1566 REMARK 465 ASN A 1567 REMARK 465 LYS A 1568 REMARK 465 LYS A 1569 REMARK 465 LYS A 1570 REMARK 465 PRO A 1571 REMARK 465 GLY A 1572 REMARK 465 MET A 1573 REMARK 465 PRO A 1574 REMARK 465 ASN A 1575 REMARK 465 VAL A 1576 REMARK 465 SER A 1577 REMARK 465 ASN A 1578 REMARK 465 ASP A 1579 REMARK 465 LEU A 1580 REMARK 465 ARG A 1665 REMARK 465 PHE A 1666 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O44 01K A 700 O HOH A 1885 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A1645 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A1645 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A1402 31.30 -77.14 REMARK 500 CYS A1450 79.02 63.70 REMARK 500 CYS A1621 104.19 -161.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1521 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1522 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1523 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1524 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BR A 1525 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 01K A 700 DBREF 3BIY A 1287 1666 UNP Q09472 EP300_HUMAN 1287 1666 SEQADV 3BIY ARG A 1637 UNP Q09472 LYS 1637 ENGINEERED MUTATION SEQADV 3BIY GLY A 1652 UNP Q09472 MET 1652 ENGINEERED MUTATION SEQRES 1 A 380 LYS PHE SER ALA LYS ARG LEU PRO SER THR ARG LEU GLY SEQRES 2 A 380 THR PHE LEU GLU ASN ARG VAL ASN ASP PHE LEU ARG ARG SEQRES 3 A 380 GLN ASN HIS PRO GLU SER GLY GLU VAL THR VAL ARG VAL SEQRES 4 A 380 VAL HIS ALA SER ASP LYS THR VAL GLU VAL LYS PRO GLY SEQRES 5 A 380 MET LYS ALA ARG PHE VAL ASP SER GLY GLU MET ALA GLU SEQRES 6 A 380 SER PHE PRO TYR ARG THR LYS ALA LEU PHE ALA PHE GLU SEQRES 7 A 380 GLU ILE ASP GLY VAL ASP LEU CYS PHE PHE GLY MET HIS SEQRES 8 A 380 VAL GLN GLU TYR GLY SER ASP CYS PRO PRO PRO ASN GLN SEQRES 9 A 380 ARG ARG VAL TYR ILE SER TYR LEU ASP SER VAL HIS PHE SEQRES 10 A 380 PHE ARG PRO LYS CYS LEU ARG THR ALA VAL TYR HIS GLU SEQRES 11 A 380 ILE LEU ILE GLY TYR LEU GLU TYR VAL LYS LYS LEU GLY SEQRES 12 A 380 TYR THR THR GLY HIS ILE TRP ALA CYS PRO PRO SER GLU SEQRES 13 A 380 GLY ASP ASP TYR ILE PHE HIS CYS HIS PRO PRO ASP GLN SEQRES 14 A 380 LYS ILE PRO LYS PRO LYS ARG LEU GLN GLU TRP TYR LYS SEQRES 15 A 380 LYS MET LEU ASP LYS ALA VAL SER GLU ARG ILE VAL HIS SEQRES 16 A 380 ASP TYR LYS ASP ILE PHE LYS GLN ALA THR GLU ASP ARG SEQRES 17 A 380 LEU THR SER ALA LYS GLU LEU PRO TYR PHE GLU GLY ASP SEQRES 18 A 380 PHE TRP PRO ASN VAL LEU GLU GLU SER ILE LYS GLU LEU SEQRES 19 A 380 GLU GLN GLU GLU GLU GLU ARG LYS ARG GLU GLU ASN THR SEQRES 20 A 380 SER ASN GLU SER THR ASP VAL THR LYS GLY ASP SER LYS SEQRES 21 A 380 ASN ALA LYS LYS LYS ASN ASN LYS LYS THR SER LYS ASN SEQRES 22 A 380 LYS SER SER LEU SER ARG GLY ASN LYS LYS LYS PRO GLY SEQRES 23 A 380 MET PRO ASN VAL SER ASN ASP LEU SER GLN LYS LEU TYR SEQRES 24 A 380 ALA THR MET GLU LYS HIS LYS GLU VAL PHE PHE VAL ILE SEQRES 25 A 380 ARG LEU ILE ALA GLY PRO ALA ALA ASN SER LEU PRO PRO SEQRES 26 A 380 ILE VAL ASP PRO ASP PRO LEU ILE PRO CYS ASP LEU MET SEQRES 27 A 380 ASP GLY ARG ASP ALA PHE LEU THR LEU ALA ARG ASP ARG SEQRES 28 A 380 HIS LEU GLU PHE SER SER LEU ARG ARG ALA GLN TRP SER SEQRES 29 A 380 THR GLY CYS MET LEU VAL GLU LEU HIS THR GLN SER GLN SEQRES 30 A 380 ASP ARG PHE HET BR A1521 1 HET BR A1522 1 HET BR A1523 1 HET BR A1524 1 HET BR A1525 1 HET 01K A 700 64 HETNAM BR BROMIDE ION HETNAM 01K [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3- HETNAM 2 01K (PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R,20R)-20- HETNAM 3 01K CARBAMOYL-3-HYDROXY-2,2-DIMETHYL-4,8,14,22-TETRAOXO- HETNAM 4 01K 12-THIA-5,9,15,21-TETRAAZATRICOS-1-YL DIHYDROGEN HETNAM 5 01K DIPHOSPHATE HETSYN 01K LYSINE-COENZYME A DERIVATIVE FORMUL 2 BR 5(BR 1-) FORMUL 7 01K C31 H53 N10 O19 P3 S FORMUL 8 HOH *234(H2 O) HELIX 1 1 THR A 1296 ASN A 1314 1 19 HELIX 2 2 GLY A 1338 PHE A 1343 1 6 HELIX 3 3 PRO A 1406 CYS A 1408 5 3 HELIX 4 4 LEU A 1409 GLY A 1429 1 21 HELIX 5 5 LYS A 1459 GLU A 1477 1 19 HELIX 6 6 ILE A 1486 ARG A 1494 1 9 HELIX 7 7 SER A 1497 LEU A 1501 5 5 HELIX 8 8 ASP A 1507 LYS A 1518 1 12 HELIX 9 9 SER A 1581 HIS A 1591 1 11 HELIX 10 10 ALA A 1602 ASN A 1607 5 6 HELIX 11 11 CYS A 1621 ASP A 1625 5 5 HELIX 12 12 ARG A 1627 ARG A 1637 1 11 HELIX 13 13 SER A 1643 GLN A 1663 1 21 SHEET 1 A 7 VAL A1321 GLU A1334 0 SHEET 2 A 7 SER A1352 ILE A1366 -1 O TYR A1355 N LYS A1331 SHEET 3 A 7 VAL A1369 TYR A1381 -1 O MET A1376 N LEU A1360 SHEET 4 A 7 ARG A1392 SER A1400 -1 O ARG A1392 N TYR A1381 SHEET 5 A 7 THR A1432 TRP A1436 1 O THR A1432 N VAL A1393 SHEET 6 A 7 PHE A1595 ARG A1599 -1 O ILE A1598 N GLY A1433 SHEET 7 A 7 ASP A1482 ASP A1485 -1 N LYS A1484 O VAL A1597 CISPEP 1 PRO A 1387 PRO A 1388 0 9.57 CISPEP 2 ARG A 1405 PRO A 1406 0 0.73 SITE 1 AC1 4 LYS A1426 HOH A1675 HOH A1693 HOH A1727 SITE 1 AC2 1 GLN A1661 SITE 1 AC3 1 ASN A1304 SITE 1 AC4 1 HOH A1829 SITE 1 AC5 5 PRO A1406 LYS A1407 SER A1476 HOH A1679 SITE 2 AC5 5 HOH A1850 SITE 1 AC6 31 SER A1396 TYR A1397 LEU A1398 ASP A1399 SITE 2 AC6 31 SER A1400 ARG A1410 THR A1411 TYR A1414 SITE 3 AC6 31 TRP A1436 CYS A1438 PRO A1440 TYR A1446 SITE 4 AC6 31 LYS A1456 ILE A1457 PRO A1458 ARG A1462 SITE 5 AC6 31 TRP A1466 TYR A1467 HOH A1672 HOH A1681 SITE 6 AC6 31 HOH A1694 HOH A1696 HOH A1713 HOH A1716 SITE 7 AC6 31 HOH A1760 HOH A1767 HOH A1775 HOH A1780 SITE 8 AC6 31 HOH A1817 HOH A1820 HOH A1885 CRYST1 61.513 61.513 101.153 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016257 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016257 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009886 0.00000