data_3BQF # _entry.id 3BQF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3BQF pdb_00003bqf 10.2210/pdb3bqf/pdb RCSB RCSB045838 ? ? WWPDB D_1000045838 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3BQE 'the same protein, reduced form' unspecified PDB 3BQG 'the same protein, sulfenic acid form' unspecified PDB 3BQH 'the same protein, oxidized form' unspecified # _pdbx_database_status.entry_id 3BQF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2007-12-20 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ranaivoson, F.M.' 1 'Kauffmann, B.' 2 'Favier, F.' 3 # _citation.id primary _citation.title 'A structural analysis of the catalytic mechanism of methionine sulfoxide reductase A from Neisseria meningitidis' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 377 _citation.page_first 268 _citation.page_last 280 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18255097 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.01.021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ranaivoson, F.M.' 1 ? primary 'Antoine, M.' 2 ? primary 'Kauffmann, B.' 3 ? primary 'Boschi-Muller, S.' 4 ? primary 'Aubry, A.' 5 ? primary 'Branlant, G.' 6 ? primary 'Favier, F.' 7 ? # _cell.length_a 43.933 _cell.length_b 50.305 _cell.length_c 66.556 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 3BQF _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3BQF _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptide methionine sulfoxide reductase msrA/msrB' 21908.264 1 1.8.4.11 C207S 'Msra Domain, Peptide methionine sulfoxide reductase A, UNP residues 196-389' ? 2 non-polymer syn '(2S)-2-(acetylamino)-N-methyl-4-[(S)-methylsulfinyl]butanamide' 220.289 1 ? ? ? ? 3 water nat water 18.015 82 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name PILB # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MNTRTIYLAGGSFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVD PTSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAEEYHQDYLIKNPNGYCHIDIRK ADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRT ; _entity_poly.pdbx_seq_one_letter_code_can ;MNTRTIYLAGGSFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVD PTSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAEEYHQDYLIKNPNGYCHIDIRK ADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASN n 1 3 THR n 1 4 ARG n 1 5 THR n 1 6 ILE n 1 7 TYR n 1 8 LEU n 1 9 ALA n 1 10 GLY n 1 11 GLY n 1 12 SER n 1 13 PHE n 1 14 TRP n 1 15 GLY n 1 16 LEU n 1 17 GLU n 1 18 ALA n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 ARG n 1 23 ILE n 1 24 ASP n 1 25 GLY n 1 26 VAL n 1 27 VAL n 1 28 ASP n 1 29 ALA n 1 30 VAL n 1 31 SER n 1 32 GLY n 1 33 TYR n 1 34 ALA n 1 35 ASN n 1 36 GLY n 1 37 ASN n 1 38 THR n 1 39 LYS n 1 40 ASN n 1 41 PRO n 1 42 SER n 1 43 TYR n 1 44 GLU n 1 45 ASP n 1 46 VAL n 1 47 SER n 1 48 TYR n 1 49 ARG n 1 50 HIS n 1 51 THR n 1 52 GLY n 1 53 HIS n 1 54 ALA n 1 55 GLU n 1 56 THR n 1 57 VAL n 1 58 LYS n 1 59 VAL n 1 60 THR n 1 61 TYR n 1 62 ASP n 1 63 ALA n 1 64 ASP n 1 65 LYS n 1 66 LEU n 1 67 SER n 1 68 LEU n 1 69 ASP n 1 70 ASP n 1 71 ILE n 1 72 LEU n 1 73 GLN n 1 74 TYR n 1 75 PHE n 1 76 PHE n 1 77 ARG n 1 78 VAL n 1 79 VAL n 1 80 ASP n 1 81 PRO n 1 82 THR n 1 83 SER n 1 84 LEU n 1 85 ASN n 1 86 LYS n 1 87 GLN n 1 88 GLY n 1 89 ASN n 1 90 ASP n 1 91 THR n 1 92 GLY n 1 93 THR n 1 94 GLN n 1 95 TYR n 1 96 ARG n 1 97 SER n 1 98 GLY n 1 99 VAL n 1 100 TYR n 1 101 TYR n 1 102 THR n 1 103 ASP n 1 104 PRO n 1 105 ALA n 1 106 GLU n 1 107 LYS n 1 108 ALA n 1 109 VAL n 1 110 ILE n 1 111 ALA n 1 112 ALA n 1 113 ALA n 1 114 LEU n 1 115 LYS n 1 116 ARG n 1 117 GLU n 1 118 GLN n 1 119 GLN n 1 120 LYS n 1 121 TYR n 1 122 GLN n 1 123 LEU n 1 124 PRO n 1 125 LEU n 1 126 VAL n 1 127 VAL n 1 128 GLU n 1 129 ASN n 1 130 GLU n 1 131 PRO n 1 132 LEU n 1 133 LYS n 1 134 ASN n 1 135 PHE n 1 136 TYR n 1 137 ASP n 1 138 ALA n 1 139 GLU n 1 140 GLU n 1 141 TYR n 1 142 HIS n 1 143 GLN n 1 144 ASP n 1 145 TYR n 1 146 LEU n 1 147 ILE n 1 148 LYS n 1 149 ASN n 1 150 PRO n 1 151 ASN n 1 152 GLY n 1 153 TYR n 1 154 CYS n 1 155 HIS n 1 156 ILE n 1 157 ASP n 1 158 ILE n 1 159 ARG n 1 160 LYS n 1 161 ALA n 1 162 ASP n 1 163 GLU n 1 164 PRO n 1 165 LEU n 1 166 PRO n 1 167 GLY n 1 168 LYS n 1 169 THR n 1 170 LYS n 1 171 THR n 1 172 ALA n 1 173 PRO n 1 174 GLN n 1 175 GLY n 1 176 LYS n 1 177 GLY n 1 178 PHE n 1 179 ASP n 1 180 ALA n 1 181 ALA n 1 182 THR n 1 183 TYR n 1 184 LYS n 1 185 LYS n 1 186 PRO n 1 187 SER n 1 188 ASP n 1 189 ALA n 1 190 GLU n 1 191 LEU n 1 192 LYS n 1 193 ARG n 1 194 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Neisseria _entity_src_gen.pdbx_gene_src_gene pilB _entity_src_gen.gene_src_species 'Neisseria meningitidis' _entity_src_gen.gene_src_strain Z2491 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Neisseria meningitidis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 122587 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BE002 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pSKPILBMsrA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MSRAB_NEIMA _struct_ref.pdbx_db_accession Q9JWM8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNTRTIYLAGGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVD PTSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAEEYHQDYLIKNPNGYCHIDIRK ADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRT ; _struct_ref.pdbx_align_begin 196 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3BQF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 194 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9JWM8 _struct_ref_seq.db_align_beg 196 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 389 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 196 _struct_ref_seq.pdbx_auth_seq_align_end 389 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3BQF _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 12 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9JWM8 _struct_ref_seq_dif.db_mon_id CYS _struct_ref_seq_dif.pdbx_seq_db_seq_num 207 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 207 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SSM non-polymer . '(2S)-2-(acetylamino)-N-methyl-4-[(S)-methylsulfinyl]butanamide' ? 'C8 H16 N2 O3 S' 220.289 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3BQF _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.679566 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 26.766775 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method microbatch-under-oil _exptl_crystal_grow.pH 9.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;1 volume of 30% PEG 550 MME, 0.1M Bicine pH 9.0, 0.1M NaCl, mixed with 1 volume of 50mM TRIS HCl, 2mM EDTA pH 8, 18mg/mL protein + 200mM AcMet(R,S)SONHMe, microbatch-under-oil, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2003-12-15 _diffrn_detector.details 'Bent Mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator Triangular _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.81 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.81 _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 # _reflns.entry_id 3BQF _reflns.B_iso_Wilson_estimate 15.700 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.22 _reflns.d_resolution_low 20 _reflns.number_all 7685 _reflns.number_obs 7491 _reflns.percent_possible_obs 97.5 _reflns.pdbx_Rmerge_I_obs 0.078 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.3 _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.24 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 99.7 _reflns_shell.Rmerge_I_obs 0.265 _reflns_shell.meanI_over_sigI_obs 4.24 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3BQF _refine.ls_d_res_high 2.240 _refine.ls_d_res_low 19.800 _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_data_cutoff_high_absF 458280.406 _refine.pdbx_data_cutoff_low_absF 0.000 _refine.ls_percent_reflns_obs 95.900 _refine.ls_number_reflns_obs 7169 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_R_work 0.185 _refine.ls_R_factor_R_free 0.209 _refine.ls_percent_reflns_R_free 9.700 _refine.ls_number_reflns_R_free 694 _refine.ls_R_factor_R_free_error 0.008 _refine.B_iso_mean 25.600 _refine.solvent_model_param_bsol 55.551 _refine.solvent_model_param_ksol 0.479 _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.aniso_B[1][1] 1.080 _refine.aniso_B[2][2] -0.930 _refine.aniso_B[3][3] -0.150 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details 'FLAT MODEL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 7475 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 3BQE' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.occupancy_max ? _refine.occupancy_min ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3BQF _refine_analyze.Luzzati_coordinate_error_obs 0.220 _refine_analyze.Luzzati_sigma_a_obs 0.190 _refine_analyze.Luzzati_d_res_low_obs 5.000 _refine_analyze.Luzzati_coordinate_error_free 0.260 _refine_analyze.Luzzati_sigma_a_free 0.200 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1341 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 1437 _refine_hist.d_res_high 2.240 _refine_hist.d_res_low 19.800 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.007 ? ? 'X-RAY DIFFRACTION' ? c_angle_deg ? 1.200 ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? 24.300 ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? 0.670 ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 1.330 1.500 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.080 2.000 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 1.590 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 2.360 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.240 _refine_ls_shell.d_res_low 2.380 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 94.900 _refine_ls_shell.number_reflns_R_work 1041 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.213 _refine_ls_shell.R_factor_R_free 0.250 _refine_ls_shell.percent_reflns_R_free 9.800 _refine_ls_shell.number_reflns_R_free 113 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.number_reflns_all 1154 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 S_mso.param S_mso.top 'X-RAY DIFFRACTION' # _struct.entry_id 3BQF _struct.title 'Structure of the central domain (MsrA) of Neisseria meningitidis PilB (complex with a substrate)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BQF _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;PILB, Methionine sulfoxide reductase A, complex with a substrate, Electron transport, Multifunctional enzyme, Oxidoreductase, Redox-active center, Transport ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 12 ? ARG A 22 ? SER A 207 ARG A 217 1 ? 11 HELX_P HELX_P2 2 SER A 42 ? ARG A 49 ? SER A 237 ARG A 244 1 ? 8 HELX_P HELX_P3 3 SER A 67 ? VAL A 79 ? SER A 262 VAL A 274 1 ? 13 HELX_P HELX_P4 4 THR A 93 ? TYR A 95 ? THR A 288 TYR A 290 5 ? 3 HELX_P HELX_P5 5 ASP A 103 ? ALA A 105 ? ASP A 298 ALA A 300 5 ? 3 HELX_P HELX_P6 6 GLU A 106 ? GLN A 119 ? GLU A 301 GLN A 314 1 ? 14 HELX_P HELX_P7 7 GLU A 139 ? GLN A 143 ? GLU A 334 GLN A 338 5 ? 5 HELX_P HELX_P8 8 ASP A 144 ? ASN A 149 ? ASP A 339 ASN A 344 1 ? 6 HELX_P HELX_P9 9 ASP A 157 ? GLU A 163 ? ASP A 352 GLU A 358 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 128 ? PRO A 131 ? GLU A 323 PRO A 326 A 2 SER A 97 ? TYR A 101 ? SER A 292 TYR A 296 A 3 THR A 3 ? GLY A 10 ? THR A 198 GLY A 205 A 4 ALA A 54 ? ASP A 62 ? ALA A 249 ASP A 257 A 5 VAL A 26 ? ALA A 34 ? VAL A 221 ALA A 229 A 6 PHE A 135 ? ASP A 137 ? PHE A 330 ASP A 332 B 1 LYS A 86 ? GLN A 87 ? LYS A 281 GLN A 282 B 2 ASP A 90 ? THR A 91 ? ASP A 285 THR A 286 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 128 ? O GLU A 323 N SER A 97 ? N SER A 292 A 2 3 O TYR A 100 ? O TYR A 295 N TYR A 7 ? N TYR A 202 A 3 4 N LEU A 8 ? N LEU A 203 O VAL A 57 ? O VAL A 252 A 4 5 O LYS A 58 ? O LYS A 253 N VAL A 30 ? N VAL A 225 A 5 6 N TYR A 33 ? N TYR A 228 O TYR A 136 ? O TYR A 331 B 1 2 N GLN A 87 ? N GLN A 282 O ASP A 90 ? O ASP A 285 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id SSM _struct_site.pdbx_auth_seq_id 400 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE SSM A 400' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 HOH C . ? HOH A 76 . ? 1_555 ? 2 AC1 7 SER A 12 ? SER A 207 . ? 1_555 ? 3 AC1 7 TRP A 14 ? TRP A 209 . ? 1_555 ? 4 AC1 7 TYR A 43 ? TYR A 238 . ? 1_555 ? 5 AC1 7 GLU A 55 ? GLU A 250 . ? 1_555 ? 6 AC1 7 ASP A 90 ? ASP A 285 . ? 1_555 ? 7 AC1 7 TYR A 95 ? TYR A 290 . ? 1_555 ? # _database_PDB_matrix.entry_id 3BQF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 3BQF _atom_sites.fract_transf_matrix[1][1] 0.022762 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019879 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015025 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 196 196 MET MET A . n A 1 2 ASN 2 197 197 ASN ASN A . n A 1 3 THR 3 198 198 THR THR A . n A 1 4 ARG 4 199 199 ARG ARG A . n A 1 5 THR 5 200 200 THR THR A . n A 1 6 ILE 6 201 201 ILE ILE A . n A 1 7 TYR 7 202 202 TYR TYR A . n A 1 8 LEU 8 203 203 LEU LEU A . n A 1 9 ALA 9 204 204 ALA ALA A . n A 1 10 GLY 10 205 205 GLY GLY A . n A 1 11 GLY 11 206 206 GLY GLY A . n A 1 12 SER 12 207 207 SER SER A . n A 1 13 PHE 13 208 208 PHE PHE A . n A 1 14 TRP 14 209 209 TRP TRP A . n A 1 15 GLY 15 210 210 GLY GLY A . n A 1 16 LEU 16 211 211 LEU LEU A . n A 1 17 GLU 17 212 212 GLU GLU A . n A 1 18 ALA 18 213 213 ALA ALA A . n A 1 19 TYR 19 214 214 TYR TYR A . n A 1 20 PHE 20 215 215 PHE PHE A . n A 1 21 GLN 21 216 216 GLN GLN A . n A 1 22 ARG 22 217 217 ARG ARG A . n A 1 23 ILE 23 218 218 ILE ILE A . n A 1 24 ASP 24 219 219 ASP ASP A . n A 1 25 GLY 25 220 220 GLY GLY A . n A 1 26 VAL 26 221 221 VAL VAL A . n A 1 27 VAL 27 222 222 VAL VAL A . n A 1 28 ASP 28 223 223 ASP ASP A . n A 1 29 ALA 29 224 224 ALA ALA A . n A 1 30 VAL 30 225 225 VAL VAL A . n A 1 31 SER 31 226 226 SER SER A . n A 1 32 GLY 32 227 227 GLY GLY A . n A 1 33 TYR 33 228 228 TYR TYR A . n A 1 34 ALA 34 229 229 ALA ALA A . n A 1 35 ASN 35 230 230 ASN ASN A . n A 1 36 GLY 36 231 231 GLY GLY A . n A 1 37 ASN 37 232 232 ASN ASN A . n A 1 38 THR 38 233 233 THR THR A . n A 1 39 LYS 39 234 234 LYS LYS A . n A 1 40 ASN 40 235 235 ASN ASN A . n A 1 41 PRO 41 236 236 PRO PRO A . n A 1 42 SER 42 237 237 SER SER A . n A 1 43 TYR 43 238 238 TYR TYR A . n A 1 44 GLU 44 239 239 GLU GLU A . n A 1 45 ASP 45 240 240 ASP ASP A . n A 1 46 VAL 46 241 241 VAL VAL A . n A 1 47 SER 47 242 242 SER SER A . n A 1 48 TYR 48 243 243 TYR TYR A . n A 1 49 ARG 49 244 244 ARG ARG A . n A 1 50 HIS 50 245 245 HIS HIS A . n A 1 51 THR 51 246 246 THR THR A . n A 1 52 GLY 52 247 247 GLY GLY A . n A 1 53 HIS 53 248 248 HIS HIS A . n A 1 54 ALA 54 249 249 ALA ALA A . n A 1 55 GLU 55 250 250 GLU GLU A . n A 1 56 THR 56 251 251 THR THR A . n A 1 57 VAL 57 252 252 VAL VAL A . n A 1 58 LYS 58 253 253 LYS LYS A . n A 1 59 VAL 59 254 254 VAL VAL A . n A 1 60 THR 60 255 255 THR THR A . n A 1 61 TYR 61 256 256 TYR TYR A . n A 1 62 ASP 62 257 257 ASP ASP A . n A 1 63 ALA 63 258 258 ALA ALA A . n A 1 64 ASP 64 259 259 ASP ASP A . n A 1 65 LYS 65 260 260 LYS LYS A . n A 1 66 LEU 66 261 261 LEU LEU A . n A 1 67 SER 67 262 262 SER SER A . n A 1 68 LEU 68 263 263 LEU LEU A . n A 1 69 ASP 69 264 264 ASP ASP A . n A 1 70 ASP 70 265 265 ASP ASP A . n A 1 71 ILE 71 266 266 ILE ILE A . n A 1 72 LEU 72 267 267 LEU LEU A . n A 1 73 GLN 73 268 268 GLN GLN A . n A 1 74 TYR 74 269 269 TYR TYR A . n A 1 75 PHE 75 270 270 PHE PHE A . n A 1 76 PHE 76 271 271 PHE PHE A . n A 1 77 ARG 77 272 272 ARG ARG A . n A 1 78 VAL 78 273 273 VAL VAL A . n A 1 79 VAL 79 274 274 VAL VAL A . n A 1 80 ASP 80 275 275 ASP ASP A . n A 1 81 PRO 81 276 276 PRO PRO A . n A 1 82 THR 82 277 277 THR THR A . n A 1 83 SER 83 278 278 SER SER A . n A 1 84 LEU 84 279 279 LEU LEU A . n A 1 85 ASN 85 280 280 ASN ASN A . n A 1 86 LYS 86 281 281 LYS LYS A . n A 1 87 GLN 87 282 282 GLN GLN A . n A 1 88 GLY 88 283 283 GLY GLY A . n A 1 89 ASN 89 284 284 ASN ASN A . n A 1 90 ASP 90 285 285 ASP ASP A . n A 1 91 THR 91 286 286 THR THR A . n A 1 92 GLY 92 287 287 GLY GLY A . n A 1 93 THR 93 288 288 THR THR A . n A 1 94 GLN 94 289 289 GLN GLN A . n A 1 95 TYR 95 290 290 TYR TYR A . n A 1 96 ARG 96 291 291 ARG ARG A . n A 1 97 SER 97 292 292 SER SER A . n A 1 98 GLY 98 293 293 GLY GLY A . n A 1 99 VAL 99 294 294 VAL VAL A . n A 1 100 TYR 100 295 295 TYR TYR A . n A 1 101 TYR 101 296 296 TYR TYR A . n A 1 102 THR 102 297 297 THR THR A . n A 1 103 ASP 103 298 298 ASP ASP A . n A 1 104 PRO 104 299 299 PRO PRO A . n A 1 105 ALA 105 300 300 ALA ALA A . n A 1 106 GLU 106 301 301 GLU GLU A . n A 1 107 LYS 107 302 302 LYS LYS A . n A 1 108 ALA 108 303 303 ALA ALA A . n A 1 109 VAL 109 304 304 VAL VAL A . n A 1 110 ILE 110 305 305 ILE ILE A . n A 1 111 ALA 111 306 306 ALA ALA A . n A 1 112 ALA 112 307 307 ALA ALA A . n A 1 113 ALA 113 308 308 ALA ALA A . n A 1 114 LEU 114 309 309 LEU LEU A . n A 1 115 LYS 115 310 310 LYS LYS A . n A 1 116 ARG 116 311 311 ARG ARG A . n A 1 117 GLU 117 312 312 GLU GLU A . n A 1 118 GLN 118 313 313 GLN GLN A . n A 1 119 GLN 119 314 314 GLN GLN A . n A 1 120 LYS 120 315 315 LYS LYS A . n A 1 121 TYR 121 316 316 TYR TYR A . n A 1 122 GLN 122 317 317 GLN GLN A . n A 1 123 LEU 123 318 318 LEU LEU A . n A 1 124 PRO 124 319 319 PRO PRO A . n A 1 125 LEU 125 320 320 LEU LEU A . n A 1 126 VAL 126 321 321 VAL VAL A . n A 1 127 VAL 127 322 322 VAL VAL A . n A 1 128 GLU 128 323 323 GLU GLU A . n A 1 129 ASN 129 324 324 ASN ASN A . n A 1 130 GLU 130 325 325 GLU GLU A . n A 1 131 PRO 131 326 326 PRO PRO A . n A 1 132 LEU 132 327 327 LEU LEU A . n A 1 133 LYS 133 328 328 LYS LYS A . n A 1 134 ASN 134 329 329 ASN ASN A . n A 1 135 PHE 135 330 330 PHE PHE A . n A 1 136 TYR 136 331 331 TYR TYR A . n A 1 137 ASP 137 332 332 ASP ASP A . n A 1 138 ALA 138 333 333 ALA ALA A . n A 1 139 GLU 139 334 334 GLU GLU A . n A 1 140 GLU 140 335 335 GLU GLU A . n A 1 141 TYR 141 336 336 TYR TYR A . n A 1 142 HIS 142 337 337 HIS HIS A . n A 1 143 GLN 143 338 338 GLN GLN A . n A 1 144 ASP 144 339 339 ASP ASP A . n A 1 145 TYR 145 340 340 TYR TYR A . n A 1 146 LEU 146 341 341 LEU LEU A . n A 1 147 ILE 147 342 342 ILE ILE A . n A 1 148 LYS 148 343 343 LYS LYS A . n A 1 149 ASN 149 344 344 ASN ASN A . n A 1 150 PRO 150 345 345 PRO PRO A . n A 1 151 ASN 151 346 346 ASN ASN A . n A 1 152 GLY 152 347 347 GLY GLY A . n A 1 153 TYR 153 348 348 TYR TYR A . n A 1 154 CYS 154 349 349 CYS CYS A . n A 1 155 HIS 155 350 350 HIS HIS A . n A 1 156 ILE 156 351 351 ILE ILE A . n A 1 157 ASP 157 352 352 ASP ASP A . n A 1 158 ILE 158 353 353 ILE ILE A . n A 1 159 ARG 159 354 354 ARG ARG A . n A 1 160 LYS 160 355 355 LYS LYS A . n A 1 161 ALA 161 356 356 ALA ALA A . n A 1 162 ASP 162 357 357 ASP ASP A . n A 1 163 GLU 163 358 358 GLU GLU A . n A 1 164 PRO 164 359 359 PRO PRO A . n A 1 165 LEU 165 360 360 LEU LEU A . n A 1 166 PRO 166 361 361 PRO PRO A . n A 1 167 GLY 167 362 362 GLY GLY A . n A 1 168 LYS 168 363 ? ? ? A . n A 1 169 THR 169 364 ? ? ? A . n A 1 170 LYS 170 365 ? ? ? A . n A 1 171 THR 171 366 ? ? ? A . n A 1 172 ALA 172 367 ? ? ? A . n A 1 173 PRO 173 368 ? ? ? A . n A 1 174 GLN 174 369 ? ? ? A . n A 1 175 GLY 175 370 ? ? ? A . n A 1 176 LYS 176 371 ? ? ? A . n A 1 177 GLY 177 372 ? ? ? A . n A 1 178 PHE 178 373 ? ? ? A . n A 1 179 ASP 179 374 ? ? ? A . n A 1 180 ALA 180 375 ? ? ? A . n A 1 181 ALA 181 376 ? ? ? A . n A 1 182 THR 182 377 ? ? ? A . n A 1 183 TYR 183 378 ? ? ? A . n A 1 184 LYS 184 379 ? ? ? A . n A 1 185 LYS 185 380 ? ? ? A . n A 1 186 PRO 186 381 ? ? ? A . n A 1 187 SER 187 382 ? ? ? A . n A 1 188 ASP 188 383 ? ? ? A . n A 1 189 ALA 189 384 ? ? ? A . n A 1 190 GLU 190 385 ? ? ? A . n A 1 191 LEU 191 386 ? ? ? A . n A 1 192 LYS 192 387 ? ? ? A . n A 1 193 ARG 193 388 ? ? ? A . n A 1 194 THR 194 389 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SSM 1 400 400 SSM SSM A . C 3 HOH 1 1 1 HOH HOH A . C 3 HOH 2 2 2 HOH HOH A . C 3 HOH 3 3 3 HOH HOH A . C 3 HOH 4 4 4 HOH HOH A . C 3 HOH 5 5 5 HOH HOH A . C 3 HOH 6 6 6 HOH HOH A . C 3 HOH 7 7 7 HOH HOH A . C 3 HOH 8 8 8 HOH HOH A . C 3 HOH 9 9 9 HOH HOH A . C 3 HOH 10 10 10 HOH HOH A . C 3 HOH 11 11 11 HOH HOH A . C 3 HOH 12 12 12 HOH HOH A . C 3 HOH 13 13 13 HOH HOH A . C 3 HOH 14 14 14 HOH HOH A . C 3 HOH 15 15 15 HOH HOH A . C 3 HOH 16 16 16 HOH HOH A . C 3 HOH 17 17 17 HOH HOH A . C 3 HOH 18 18 18 HOH HOH A . C 3 HOH 19 19 19 HOH HOH A . C 3 HOH 20 20 20 HOH HOH A . C 3 HOH 21 21 21 HOH HOH A . C 3 HOH 22 22 22 HOH HOH A . C 3 HOH 23 23 23 HOH HOH A . C 3 HOH 24 24 24 HOH HOH A . C 3 HOH 25 25 25 HOH HOH A . C 3 HOH 26 26 26 HOH HOH A . C 3 HOH 27 27 27 HOH HOH A . C 3 HOH 28 28 28 HOH HOH A . C 3 HOH 29 29 29 HOH HOH A . C 3 HOH 30 30 30 HOH HOH A . C 3 HOH 31 31 31 HOH HOH A . C 3 HOH 32 32 32 HOH HOH A . C 3 HOH 33 33 33 HOH HOH A . C 3 HOH 34 34 34 HOH HOH A . C 3 HOH 35 35 35 HOH HOH A . C 3 HOH 36 36 36 HOH HOH A . C 3 HOH 37 37 37 HOH HOH A . C 3 HOH 38 38 38 HOH HOH A . C 3 HOH 39 39 39 HOH HOH A . C 3 HOH 40 40 40 HOH HOH A . C 3 HOH 41 41 41 HOH HOH A . C 3 HOH 42 42 42 HOH HOH A . C 3 HOH 43 43 43 HOH HOH A . C 3 HOH 44 44 44 HOH HOH A . C 3 HOH 45 45 45 HOH HOH A . C 3 HOH 46 46 46 HOH HOH A . C 3 HOH 47 47 47 HOH HOH A . C 3 HOH 48 48 48 HOH HOH A . C 3 HOH 49 49 49 HOH HOH A . C 3 HOH 50 50 50 HOH HOH A . C 3 HOH 51 51 51 HOH HOH A . C 3 HOH 52 52 52 HOH HOH A . C 3 HOH 53 53 53 HOH HOH A . C 3 HOH 54 54 54 HOH HOH A . C 3 HOH 55 55 55 HOH HOH A . C 3 HOH 56 56 56 HOH HOH A . C 3 HOH 57 57 57 HOH HOH A . C 3 HOH 58 58 58 HOH HOH A . C 3 HOH 59 59 59 HOH HOH A . C 3 HOH 60 60 60 HOH HOH A . C 3 HOH 61 61 61 HOH HOH A . C 3 HOH 62 62 62 HOH HOH A . C 3 HOH 63 63 63 HOH HOH A . C 3 HOH 64 64 64 HOH HOH A . C 3 HOH 65 65 65 HOH HOH A . C 3 HOH 66 66 66 HOH HOH A . C 3 HOH 67 67 67 HOH HOH A . C 3 HOH 68 68 68 HOH HOH A . C 3 HOH 69 69 69 HOH HOH A . C 3 HOH 70 70 70 HOH HOH A . C 3 HOH 71 71 71 HOH HOH A . C 3 HOH 72 72 72 HOH HOH A . C 3 HOH 73 73 73 HOH HOH A . C 3 HOH 74 74 74 HOH HOH A . C 3 HOH 75 75 75 HOH HOH A . C 3 HOH 76 76 76 HOH HOH A . C 3 HOH 77 77 77 HOH HOH A . C 3 HOH 78 78 78 HOH HOH A . C 3 HOH 79 79 79 HOH HOH A . C 3 HOH 80 80 80 HOH HOH A . C 3 HOH 81 81 81 HOH HOH A . C 3 HOH 82 82 82 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' database_2 3 4 'Structure model' diffrn_source 4 4 'Structure model' struct_ref_seq_dif 5 4 'Structure model' struct_site 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 5 4 'Structure model' '_struct_ref_seq_dif.details' 6 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS 1.0 ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 1 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 MAR345 . ? ? ? ? 'data collection' ? ? ? 3 DENZO . ? ? ? ? 'data reduction' ? ? ? 4 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 5 CNS . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 363 ? A LYS 168 2 1 Y 1 A THR 364 ? A THR 169 3 1 Y 1 A LYS 365 ? A LYS 170 4 1 Y 1 A THR 366 ? A THR 171 5 1 Y 1 A ALA 367 ? A ALA 172 6 1 Y 1 A PRO 368 ? A PRO 173 7 1 Y 1 A GLN 369 ? A GLN 174 8 1 Y 1 A GLY 370 ? A GLY 175 9 1 Y 1 A LYS 371 ? A LYS 176 10 1 Y 1 A GLY 372 ? A GLY 177 11 1 Y 1 A PHE 373 ? A PHE 178 12 1 Y 1 A ASP 374 ? A ASP 179 13 1 Y 1 A ALA 375 ? A ALA 180 14 1 Y 1 A ALA 376 ? A ALA 181 15 1 Y 1 A THR 377 ? A THR 182 16 1 Y 1 A TYR 378 ? A TYR 183 17 1 Y 1 A LYS 379 ? A LYS 184 18 1 Y 1 A LYS 380 ? A LYS 185 19 1 Y 1 A PRO 381 ? A PRO 186 20 1 Y 1 A SER 382 ? A SER 187 21 1 Y 1 A ASP 383 ? A ASP 188 22 1 Y 1 A ALA 384 ? A ALA 189 23 1 Y 1 A GLU 385 ? A GLU 190 24 1 Y 1 A LEU 386 ? A LEU 191 25 1 Y 1 A LYS 387 ? A LYS 192 26 1 Y 1 A ARG 388 ? A ARG 193 27 1 Y 1 A THR 389 ? A THR 194 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SSM C2 C N N 304 SSM C C N N 305 SSM O O N N 306 SSM N N N N 307 SSM CA C N S 308 SSM CB C N N 309 SSM CG C N N 310 SSM SD S N S 311 SSM OD1 O N N 312 SSM CE C N N 313 SSM C3 C N N 314 SSM O3 O N N 315 SSM N2 N N N 316 SSM C1 C N N 317 SSM H2 H N N 318 SSM H2A H N N 319 SSM H2B H N N 320 SSM HN H N N 321 SSM HA H N N 322 SSM HB H N N 323 SSM HBA H N N 324 SSM HG H N N 325 SSM HGA H N N 326 SSM HE H N N 327 SSM HEA H N N 328 SSM HEB H N N 329 SSM HN2 H N N 330 SSM H1 H N N 331 SSM H1A H N N 332 SSM H1B H N N 333 THR N N N N 334 THR CA C N S 335 THR C C N N 336 THR O O N N 337 THR CB C N R 338 THR OG1 O N N 339 THR CG2 C N N 340 THR OXT O N N 341 THR H H N N 342 THR H2 H N N 343 THR HA H N N 344 THR HB H N N 345 THR HG1 H N N 346 THR HG21 H N N 347 THR HG22 H N N 348 THR HG23 H N N 349 THR HXT H N N 350 TRP N N N N 351 TRP CA C N S 352 TRP C C N N 353 TRP O O N N 354 TRP CB C N N 355 TRP CG C Y N 356 TRP CD1 C Y N 357 TRP CD2 C Y N 358 TRP NE1 N Y N 359 TRP CE2 C Y N 360 TRP CE3 C Y N 361 TRP CZ2 C Y N 362 TRP CZ3 C Y N 363 TRP CH2 C Y N 364 TRP OXT O N N 365 TRP H H N N 366 TRP H2 H N N 367 TRP HA H N N 368 TRP HB2 H N N 369 TRP HB3 H N N 370 TRP HD1 H N N 371 TRP HE1 H N N 372 TRP HE3 H N N 373 TRP HZ2 H N N 374 TRP HZ3 H N N 375 TRP HH2 H N N 376 TRP HXT H N N 377 TYR N N N N 378 TYR CA C N S 379 TYR C C N N 380 TYR O O N N 381 TYR CB C N N 382 TYR CG C Y N 383 TYR CD1 C Y N 384 TYR CD2 C Y N 385 TYR CE1 C Y N 386 TYR CE2 C Y N 387 TYR CZ C Y N 388 TYR OH O N N 389 TYR OXT O N N 390 TYR H H N N 391 TYR H2 H N N 392 TYR HA H N N 393 TYR HB2 H N N 394 TYR HB3 H N N 395 TYR HD1 H N N 396 TYR HD2 H N N 397 TYR HE1 H N N 398 TYR HE2 H N N 399 TYR HH H N N 400 TYR HXT H N N 401 VAL N N N N 402 VAL CA C N S 403 VAL C C N N 404 VAL O O N N 405 VAL CB C N N 406 VAL CG1 C N N 407 VAL CG2 C N N 408 VAL OXT O N N 409 VAL H H N N 410 VAL H2 H N N 411 VAL HA H N N 412 VAL HB H N N 413 VAL HG11 H N N 414 VAL HG12 H N N 415 VAL HG13 H N N 416 VAL HG21 H N N 417 VAL HG22 H N N 418 VAL HG23 H N N 419 VAL HXT H N N 420 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SSM C2 C sing N N 290 SSM C O doub N N 291 SSM C N sing N N 292 SSM N CA sing N N 293 SSM CA CB sing N N 294 SSM CA C3 sing N N 295 SSM CB CG sing N N 296 SSM CG SD sing N N 297 SSM SD OD1 doub N N 298 SSM SD CE sing N N 299 SSM C3 O3 doub N N 300 SSM C3 N2 sing N N 301 SSM N2 C1 sing N N 302 SSM C2 H2 sing N N 303 SSM C2 H2A sing N N 304 SSM C2 H2B sing N N 305 SSM N HN sing N N 306 SSM CA HA sing N N 307 SSM CB HB sing N N 308 SSM CB HBA sing N N 309 SSM CG HG sing N N 310 SSM CG HGA sing N N 311 SSM CE HE sing N N 312 SSM CE HEA sing N N 313 SSM CE HEB sing N N 314 SSM N2 HN2 sing N N 315 SSM C1 H1 sing N N 316 SSM C1 H1A sing N N 317 SSM C1 H1B sing N N 318 THR N CA sing N N 319 THR N H sing N N 320 THR N H2 sing N N 321 THR CA C sing N N 322 THR CA CB sing N N 323 THR CA HA sing N N 324 THR C O doub N N 325 THR C OXT sing N N 326 THR CB OG1 sing N N 327 THR CB CG2 sing N N 328 THR CB HB sing N N 329 THR OG1 HG1 sing N N 330 THR CG2 HG21 sing N N 331 THR CG2 HG22 sing N N 332 THR CG2 HG23 sing N N 333 THR OXT HXT sing N N 334 TRP N CA sing N N 335 TRP N H sing N N 336 TRP N H2 sing N N 337 TRP CA C sing N N 338 TRP CA CB sing N N 339 TRP CA HA sing N N 340 TRP C O doub N N 341 TRP C OXT sing N N 342 TRP CB CG sing N N 343 TRP CB HB2 sing N N 344 TRP CB HB3 sing N N 345 TRP CG CD1 doub Y N 346 TRP CG CD2 sing Y N 347 TRP CD1 NE1 sing Y N 348 TRP CD1 HD1 sing N N 349 TRP CD2 CE2 doub Y N 350 TRP CD2 CE3 sing Y N 351 TRP NE1 CE2 sing Y N 352 TRP NE1 HE1 sing N N 353 TRP CE2 CZ2 sing Y N 354 TRP CE3 CZ3 doub Y N 355 TRP CE3 HE3 sing N N 356 TRP CZ2 CH2 doub Y N 357 TRP CZ2 HZ2 sing N N 358 TRP CZ3 CH2 sing Y N 359 TRP CZ3 HZ3 sing N N 360 TRP CH2 HH2 sing N N 361 TRP OXT HXT sing N N 362 TYR N CA sing N N 363 TYR N H sing N N 364 TYR N H2 sing N N 365 TYR CA C sing N N 366 TYR CA CB sing N N 367 TYR CA HA sing N N 368 TYR C O doub N N 369 TYR C OXT sing N N 370 TYR CB CG sing N N 371 TYR CB HB2 sing N N 372 TYR CB HB3 sing N N 373 TYR CG CD1 doub Y N 374 TYR CG CD2 sing Y N 375 TYR CD1 CE1 sing Y N 376 TYR CD1 HD1 sing N N 377 TYR CD2 CE2 doub Y N 378 TYR CD2 HD2 sing N N 379 TYR CE1 CZ doub Y N 380 TYR CE1 HE1 sing N N 381 TYR CE2 CZ sing Y N 382 TYR CE2 HE2 sing N N 383 TYR CZ OH sing N N 384 TYR OH HH sing N N 385 TYR OXT HXT sing N N 386 VAL N CA sing N N 387 VAL N H sing N N 388 VAL N H2 sing N N 389 VAL CA C sing N N 390 VAL CA CB sing N N 391 VAL CA HA sing N N 392 VAL C O doub N N 393 VAL C OXT sing N N 394 VAL CB CG1 sing N N 395 VAL CB CG2 sing N N 396 VAL CB HB sing N N 397 VAL CG1 HG11 sing N N 398 VAL CG1 HG12 sing N N 399 VAL CG1 HG13 sing N N 400 VAL CG2 HG21 sing N N 401 VAL CG2 HG22 sing N N 402 VAL CG2 HG23 sing N N 403 VAL OXT HXT sing N N 404 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2S)-2-(acetylamino)-N-methyl-4-[(S)-methylsulfinyl]butanamide' SSM 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BQE _pdbx_initial_refinement_model.details 'PDB ENTRY 3BQE' #