HEADER DNA BINDING PROTEIN 02-JAN-08 3BU8 TITLE CRYSTAL STRUCTURE OF TRF2 TRFH DOMAIN AND TIN2 PEPTIDE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TELOMERIC REPEAT-BINDING FACTOR 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: TRFH DOMAIN, DIMERIZATION DOMAIN; COMPND 5 SYNONYM: TTAGGG REPEAT-BINDING FACTOR 2, TELOMERIC DNA-BINDING COMPND 6 PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: TERF1-INTERACTING NUCLEAR FACTOR 2; COMPND 10 CHAIN: C, D; COMPND 11 FRAGMENT: UNP RESIDUES 2-19; COMPND 12 SYNONYM: TRF1-INTERACTING NUCLEAR PROTEIN 2; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TERF2, TRBF2, TRF2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B-SUMO; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: TINF2, TIN2; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET28B-SUMO KEYWDS TRF2 TRFH DOMAIN TRF2 DIMERIZATION DOMAIN TIN2 PEPTIDE, ALTERNATIVE KEYWDS 2 SPLICING, CELL CYCLE, CHROMOSOMAL PROTEIN, DNA-BINDING, NUCLEUS, KEYWDS 3 PHOSPHOPROTEIN, TELOMERE, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,Y.YANG,M.VAN OVERBEEK,J.R.DONIGIAN,P.BACIU,T.DE LANGE,M.LEI REVDAT 4 30-AUG-23 3BU8 1 REMARK REVDAT 3 24-FEB-09 3BU8 1 VERSN REVDAT 2 04-MAR-08 3BU8 1 JRNL REVDAT 1 19-FEB-08 3BU8 0 JRNL AUTH Y.CHEN,Y.YANG,M.VAN OVERBEEK,J.R.DONIGIAN,P.BACIU, JRNL AUTH 2 T.DE LANGE,M.LEI JRNL TITL A SHARED DOCKING MOTIF IN TRF1 AND TRF2 USED FOR JRNL TITL 2 DIFFERENTIAL RECRUITMENT OF TELOMERIC PROTEINS. JRNL REF SCIENCE V. 319 1092 2008 JRNL REFN ISSN 0036-8075 JRNL PMID 18202258 JRNL DOI 10.1126/SCIENCE.1151804 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 500.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.2 REMARK 3 NUMBER OF REFLECTIONS : 27266 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.238 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2700 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3550 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.568 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 20.83 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.903 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3BU8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000045961. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-06 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28753 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 500.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 13.60 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 41.7800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.40 REMARK 200 R MERGE FOR SHELL (I) : 0.43700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.630 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1H6P REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG550 MME 14%, HEPES.NA 50 MM REMARK 280 TRIS.HCL 40 MM, MGCL2 5 MM, DTT 2 MM, PH 8.0, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.80000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.61750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.61750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.40000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.61750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.61750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 136.20000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.61750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.61750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.40000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.61750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.61750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 136.20000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.80000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5820 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 -37.61750 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 37.61750 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -45.40000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1710 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1450 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 42 REMARK 465 ALA A 43 REMARK 465 SER A 248 REMARK 465 ALA A 249 REMARK 465 ALA A 250 REMARK 465 SER A 251 REMARK 465 SER A 252 REMARK 465 THR A 253 REMARK 465 GLY A 254 REMARK 465 LYS A 255 REMARK 465 GLU A 256 REMARK 465 ASP A 257 REMARK 465 LYS A 258 REMARK 465 GLN A 259 REMARK 465 PRO A 260 REMARK 465 ALA A 261 REMARK 465 PRO A 262 REMARK 465 GLY A 263 REMARK 465 PRO A 264 REMARK 465 VAL A 265 REMARK 465 GLU A 266 REMARK 465 LYS A 267 REMARK 465 PRO A 268 REMARK 465 PRO A 269 REMARK 465 ARG A 270 REMARK 465 GLU A 271 REMARK 465 PRO A 272 REMARK 465 ALA A 273 REMARK 465 ARG A 274 REMARK 465 GLN A 275 REMARK 465 LEU A 276 REMARK 465 GLY B 42 REMARK 465 ALA B 250 REMARK 465 SER B 251 REMARK 465 SER B 252 REMARK 465 THR B 253 REMARK 465 GLY B 254 REMARK 465 LYS B 255 REMARK 465 GLU B 256 REMARK 465 ASP B 257 REMARK 465 LYS B 258 REMARK 465 GLN B 259 REMARK 465 PRO B 260 REMARK 465 ALA B 261 REMARK 465 PRO B 262 REMARK 465 GLY B 263 REMARK 465 PRO B 264 REMARK 465 VAL B 265 REMARK 465 GLU B 266 REMARK 465 LYS B 267 REMARK 465 PRO B 268 REMARK 465 PRO B 269 REMARK 465 ARG B 270 REMARK 465 GLU B 271 REMARK 465 PRO B 272 REMARK 465 ALA B 273 REMARK 465 ARG B 274 REMARK 465 GLN B 275 REMARK 465 LEU B 276 REMARK 465 TRP C 272 REMARK 465 ALA C 273 REMARK 465 SER C 274 REMARK 465 THR C 275 REMARK 465 ARG D 267 REMARK 465 VAL D 268 REMARK 465 GLN D 269 REMARK 465 SER D 270 REMARK 465 GLN D 271 REMARK 465 TRP D 272 REMARK 465 ALA D 273 REMARK 465 SER D 274 REMARK 465 THR D 275 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 58 OE1 GLU B 94 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 101 CA - CB - CG ANGL. DEV. = 27.5 DEGREES REMARK 500 LYS B 93 CB - CA - C ANGL. DEV. = -13.7 DEGREES REMARK 500 LYS B 93 N - CA - C ANGL. DEV. = 17.4 DEGREES REMARK 500 SER B 183 N - CA - C ANGL. DEV. = 18.3 DEGREES REMARK 500 SER B 246 N - CA - C ANGL. DEV. = -19.3 DEGREES REMARK 500 ALA B 249 N - CA - C ANGL. DEV. = 21.5 DEGREES REMARK 500 ARG D 265 N - CA - CB ANGL. DEV. = -12.2 DEGREES REMARK 500 ARG D 265 N - CA - C ANGL. DEV. = 19.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 45 13.88 -64.86 REMARK 500 LEU A 116 4.66 -68.72 REMARK 500 LYS A 245 -88.67 -58.07 REMARK 500 SER A 246 -73.99 -43.60 REMARK 500 GLU B 94 124.70 -21.72 REMARK 500 LYS B 184 7.87 53.24 REMARK 500 LYS B 242 -74.76 -67.38 REMARK 500 SER B 248 139.94 176.33 REMARK 500 SER C 270 -85.59 -28.80 REMARK 500 ARG D 265 87.86 25.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3BUA RELATED DB: PDB REMARK 900 RELATED ID: 3BQO RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE RESIDUE SER 257 C AND SER 257 D CAME FROM A PROTEASE SPECIFIC REMARK 999 DIGESTION. IT IS A RESIDUAL RESIDUE AFTER DIGESTION. DBREF 3BU8 A 42 276 UNP Q15554 TERF2_HUMAN 42 276 DBREF 3BU8 B 42 276 UNP Q15554 TERF2_HUMAN 42 276 DBREF 3BU8 C 258 275 UNP Q9BSI4 TINF2_HUMAN 258 275 DBREF 3BU8 D 258 275 UNP Q9BSI4 TINF2_HUMAN 258 275 SEQADV 3BU8 SER C 257 UNP Q9BSI4 SEE REMARK 999 SEQADV 3BU8 SER D 257 UNP Q9BSI4 SEE REMARK 999 SEQRES 1 A 235 GLY ALA GLY GLU ALA ARG LEU GLU GLU ALA VAL ASN ARG SEQRES 2 A 235 TRP VAL LEU LYS PHE TYR PHE HIS GLU ALA LEU ARG ALA SEQRES 3 A 235 PHE ARG GLY SER ARG TYR GLY ASP PHE ARG GLN ILE ARG SEQRES 4 A 235 ASP ILE MET GLN ALA LEU LEU VAL ARG PRO LEU GLY LYS SEQRES 5 A 235 GLU HIS THR VAL SER ARG LEU LEU ARG VAL MET GLN CYS SEQRES 6 A 235 LEU SER ARG ILE GLU GLU GLY GLU ASN LEU ASP CYS SER SEQRES 7 A 235 PHE ASP MET GLU ALA GLU LEU THR PRO LEU GLU SER ALA SEQRES 8 A 235 ILE ASN VAL LEU GLU MET ILE LYS THR GLU PHE THR LEU SEQRES 9 A 235 THR GLU ALA VAL VAL GLU SER SER ARG LYS LEU VAL LYS SEQRES 10 A 235 GLU ALA ALA VAL ILE ILE CYS ILE LYS ASN LYS GLU PHE SEQRES 11 A 235 GLU LYS ALA SER LYS ILE LEU LYS LYS HIS MET SER LYS SEQRES 12 A 235 ASP PRO THR THR GLN LYS LEU ARG ASN ASP LEU LEU ASN SEQRES 13 A 235 ILE ILE ARG GLU LYS ASN LEU ALA HIS PRO VAL ILE GLN SEQRES 14 A 235 ASN PHE SER TYR GLU THR PHE GLN GLN LYS MET LEU ARG SEQRES 15 A 235 PHE LEU GLU SER HIS LEU ASP ASP ALA GLU PRO TYR LEU SEQRES 16 A 235 LEU THR MET ALA LYS LYS ALA LEU LYS SER GLU SER ALA SEQRES 17 A 235 ALA SER SER THR GLY LYS GLU ASP LYS GLN PRO ALA PRO SEQRES 18 A 235 GLY PRO VAL GLU LYS PRO PRO ARG GLU PRO ALA ARG GLN SEQRES 19 A 235 LEU SEQRES 1 B 235 GLY ALA GLY GLU ALA ARG LEU GLU GLU ALA VAL ASN ARG SEQRES 2 B 235 TRP VAL LEU LYS PHE TYR PHE HIS GLU ALA LEU ARG ALA SEQRES 3 B 235 PHE ARG GLY SER ARG TYR GLY ASP PHE ARG GLN ILE ARG SEQRES 4 B 235 ASP ILE MET GLN ALA LEU LEU VAL ARG PRO LEU GLY LYS SEQRES 5 B 235 GLU HIS THR VAL SER ARG LEU LEU ARG VAL MET GLN CYS SEQRES 6 B 235 LEU SER ARG ILE GLU GLU GLY GLU ASN LEU ASP CYS SER SEQRES 7 B 235 PHE ASP MET GLU ALA GLU LEU THR PRO LEU GLU SER ALA SEQRES 8 B 235 ILE ASN VAL LEU GLU MET ILE LYS THR GLU PHE THR LEU SEQRES 9 B 235 THR GLU ALA VAL VAL GLU SER SER ARG LYS LEU VAL LYS SEQRES 10 B 235 GLU ALA ALA VAL ILE ILE CYS ILE LYS ASN LYS GLU PHE SEQRES 11 B 235 GLU LYS ALA SER LYS ILE LEU LYS LYS HIS MET SER LYS SEQRES 12 B 235 ASP PRO THR THR GLN LYS LEU ARG ASN ASP LEU LEU ASN SEQRES 13 B 235 ILE ILE ARG GLU LYS ASN LEU ALA HIS PRO VAL ILE GLN SEQRES 14 B 235 ASN PHE SER TYR GLU THR PHE GLN GLN LYS MET LEU ARG SEQRES 15 B 235 PHE LEU GLU SER HIS LEU ASP ASP ALA GLU PRO TYR LEU SEQRES 16 B 235 LEU THR MET ALA LYS LYS ALA LEU LYS SER GLU SER ALA SEQRES 17 B 235 ALA SER SER THR GLY LYS GLU ASP LYS GLN PRO ALA PRO SEQRES 18 B 235 GLY PRO VAL GLU LYS PRO PRO ARG GLU PRO ALA ARG GLN SEQRES 19 B 235 LEU SEQRES 1 C 19 SER PHE ASN LEU ALA PRO LEU GLY ARG ARG ARG VAL GLN SEQRES 2 C 19 SER GLN TRP ALA SER THR SEQRES 1 D 19 SER PHE ASN LEU ALA PRO LEU GLY ARG ARG ARG VAL GLN SEQRES 2 D 19 SER GLN TRP ALA SER THR FORMUL 5 HOH *210(H2 O) HELIX 1 1 ARG A 47 GLY A 70 1 24 HELIX 2 2 ARG A 72 LEU A 87 1 16 HELIX 3 3 GLU A 94 GLU A 112 1 19 HELIX 4 4 THR A 127 PHE A 143 1 17 HELIX 5 5 THR A 146 ASN A 168 1 23 HELIX 6 6 GLU A 170 MET A 182 1 13 HELIX 7 7 ASP A 185 THR A 187 5 3 HELIX 8 8 THR A 188 LYS A 202 1 15 HELIX 9 9 HIS A 206 ASN A 211 1 6 HELIX 10 10 SER A 213 SER A 227 1 15 HELIX 11 11 PRO A 234 LEU A 244 1 11 HELIX 12 12 ALA B 43 GLY B 70 1 28 HELIX 13 13 ARG B 72 LEU B 87 1 16 HELIX 14 14 GLU B 94 GLU B 112 1 19 HELIX 15 15 THR B 127 PHE B 143 1 17 HELIX 16 16 THR B 146 ASN B 168 1 23 HELIX 17 17 GLU B 170 MET B 182 1 13 HELIX 18 18 THR B 188 LYS B 202 1 15 HELIX 19 19 HIS B 206 ASN B 211 1 6 HELIX 20 20 SER B 213 SER B 227 1 15 HELIX 21 21 PRO B 234 LEU B 244 1 11 SHEET 1 A 2 CYS A 118 SER A 119 0 SHEET 2 A 2 GLY C 264 ARG C 265 -1 O GLY C 264 N SER A 119 CRYST1 75.235 75.235 181.600 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013292 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005507 0.00000