data_3BY4 # _entry.id 3BY4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3BY4 RCSB RCSB046101 WWPDB D_1000046101 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3C0R _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 3BY4 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-01-15 _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Messick, T.E.' 1 'Marmorstein, R.' 2 # _citation.id primary _citation.title 'Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 283 _citation.page_first 11038 _citation.page_last 11049 _citation.year 2008 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18270205 _citation.pdbx_database_id_DOI 10.1074/jbc.M704398200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Messick, T.E.' 1 primary 'Russell, N.S.' 2 primary 'Iwata, A.J.' 3 primary 'Sarachan, K.L.' 4 primary 'Shiekhattar, R.' 5 primary 'Shanks, J.R.' 6 primary 'Reyes-Turcu, F.E.' 7 primary 'Wilkinson, K.D.' 8 primary 'Marmorstein, R.' 9 # _cell.entry_id 3BY4 _cell.length_a 46.304 _cell.length_b 73.215 _cell.length_c 88.880 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 3BY4 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ubiquitin thioesterase OTU1' 23869.035 1 3.4.19.12 ? 'Otu domain' ? 2 polymer man Ubiquitin 8519.778 1 ? ? ? ? 3 non-polymer syn 3-AMINOPROPANE 59.110 1 ? ? ? ? 4 water nat water 18.015 144 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Otu1; OTU domain-containing protein 1' 2 'Ubiquitin B' # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.3.4.19.12 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKRVLKSTEMSIGGSGENVLSVHPVLDDNSCLFHAIAYGIFKQDSVRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWI LKMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNEDKFDNYILILFNGIHYDSLTMNEFKTVFNKNQPESDDVLTAA LQLASNLKQTGYSFNTHKAQIKCNTCQMTFVGEREVARHAESTGHVDFGQNR ; ;MKRVLKSTEMSIGGSGENVLSVHPVLDDNSCLFHAIAYGIFKQDSVRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWI LKMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNEDKFDNYILILFNGIHYDSLTMNEFKTVFNKNQPESDDVLTAA LQLASNLKQTGYSFNTHKAQIKCNTCQMTFVGEREVARHAESTGHVDFGQNR ; A ? 2 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ARG n 1 4 VAL n 1 5 LEU n 1 6 LYS n 1 7 SER n 1 8 THR n 1 9 GLU n 1 10 MET n 1 11 SER n 1 12 ILE n 1 13 GLY n 1 14 GLY n 1 15 SER n 1 16 GLY n 1 17 GLU n 1 18 ASN n 1 19 VAL n 1 20 LEU n 1 21 SER n 1 22 VAL n 1 23 HIS n 1 24 PRO n 1 25 VAL n 1 26 LEU n 1 27 ASP n 1 28 ASP n 1 29 ASN n 1 30 SER n 1 31 CYS n 1 32 LEU n 1 33 PHE n 1 34 HIS n 1 35 ALA n 1 36 ILE n 1 37 ALA n 1 38 TYR n 1 39 GLY n 1 40 ILE n 1 41 PHE n 1 42 LYS n 1 43 GLN n 1 44 ASP n 1 45 SER n 1 46 VAL n 1 47 ARG n 1 48 ASP n 1 49 LEU n 1 50 ARG n 1 51 GLU n 1 52 MET n 1 53 VAL n 1 54 SER n 1 55 LYS n 1 56 GLU n 1 57 VAL n 1 58 LEU n 1 59 ASN n 1 60 ASN n 1 61 PRO n 1 62 VAL n 1 63 LYS n 1 64 PHE n 1 65 ASN n 1 66 ASP n 1 67 ALA n 1 68 ILE n 1 69 LEU n 1 70 ASP n 1 71 LYS n 1 72 PRO n 1 73 ASN n 1 74 LYS n 1 75 ASP n 1 76 TYR n 1 77 ALA n 1 78 GLN n 1 79 TRP n 1 80 ILE n 1 81 LEU n 1 82 LYS n 1 83 MET n 1 84 GLU n 1 85 SER n 1 86 TRP n 1 87 GLY n 1 88 GLY n 1 89 ALA n 1 90 ILE n 1 91 GLU n 1 92 ILE n 1 93 GLY n 1 94 ILE n 1 95 ILE n 1 96 SER n 1 97 ASP n 1 98 ALA n 1 99 LEU n 1 100 ALA n 1 101 VAL n 1 102 ALA n 1 103 ILE n 1 104 TYR n 1 105 VAL n 1 106 VAL n 1 107 ASP n 1 108 ILE n 1 109 ASP n 1 110 ALA n 1 111 VAL n 1 112 LYS n 1 113 ILE n 1 114 GLU n 1 115 LYS n 1 116 PHE n 1 117 ASN n 1 118 GLU n 1 119 ASP n 1 120 LYS n 1 121 PHE n 1 122 ASP n 1 123 ASN n 1 124 TYR n 1 125 ILE n 1 126 LEU n 1 127 ILE n 1 128 LEU n 1 129 PHE n 1 130 ASN n 1 131 GLY n 1 132 ILE n 1 133 HIS n 1 134 TYR n 1 135 ASP n 1 136 SER n 1 137 LEU n 1 138 THR n 1 139 MET n 1 140 ASN n 1 141 GLU n 1 142 PHE n 1 143 LYS n 1 144 THR n 1 145 VAL n 1 146 PHE n 1 147 ASN n 1 148 LYS n 1 149 ASN n 1 150 GLN n 1 151 PRO n 1 152 GLU n 1 153 SER n 1 154 ASP n 1 155 ASP n 1 156 VAL n 1 157 LEU n 1 158 THR n 1 159 ALA n 1 160 ALA n 1 161 LEU n 1 162 GLN n 1 163 LEU n 1 164 ALA n 1 165 SER n 1 166 ASN n 1 167 LEU n 1 168 LYS n 1 169 GLN n 1 170 THR n 1 171 GLY n 1 172 TYR n 1 173 SER n 1 174 PHE n 1 175 ASN n 1 176 THR n 1 177 HIS n 1 178 LYS n 1 179 ALA n 1 180 GLN n 1 181 ILE n 1 182 LYS n 1 183 CYS n 1 184 ASN n 1 185 THR n 1 186 CYS n 1 187 GLN n 1 188 MET n 1 189 THR n 1 190 PHE n 1 191 VAL n 1 192 GLY n 1 193 GLU n 1 194 ARG n 1 195 GLU n 1 196 VAL n 1 197 ALA n 1 198 ARG n 1 199 HIS n 1 200 ALA n 1 201 GLU n 1 202 SER n 1 203 THR n 1 204 GLY n 1 205 HIS n 1 206 VAL n 1 207 ASP n 1 208 PHE n 1 209 GLY n 1 210 GLN n 1 211 ASN n 1 212 ARG n 2 1 MET n 2 2 GLN n 2 3 ILE n 2 4 PHE n 2 5 VAL n 2 6 LYS n 2 7 THR n 2 8 LEU n 2 9 THR n 2 10 GLY n 2 11 LYS n 2 12 THR n 2 13 ILE n 2 14 THR n 2 15 LEU n 2 16 GLU n 2 17 VAL n 2 18 GLU n 2 19 PRO n 2 20 SER n 2 21 ASP n 2 22 THR n 2 23 ILE n 2 24 GLU n 2 25 ASN n 2 26 VAL n 2 27 LYS n 2 28 ALA n 2 29 LYS n 2 30 ILE n 2 31 GLN n 2 32 ASP n 2 33 LYS n 2 34 GLU n 2 35 GLY n 2 36 ILE n 2 37 PRO n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 GLN n 2 42 ARG n 2 43 LEU n 2 44 ILE n 2 45 PHE n 2 46 ALA n 2 47 GLY n 2 48 LYS n 2 49 GLN n 2 50 LEU n 2 51 GLU n 2 52 ASP n 2 53 GLY n 2 54 ARG n 2 55 THR n 2 56 LEU n 2 57 SER n 2 58 ASP n 2 59 TYR n 2 60 ASN n 2 61 ILE n 2 62 GLN n 2 63 LYS n 2 64 GLU n 2 65 SER n 2 66 THR n 2 67 LEU n 2 68 HIS n 2 69 LEU n 2 70 VAL n 2 71 LEU n 2 72 ARG n 2 73 LEU n 2 74 ARG n 2 75 GLY n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ;baker's yeast ; Saccharomyces Otu1 ? ? ? ? ? ? 'Saccharomyces cerevisiae' 4932 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pTYB2 ? ? 2 1 sample ? ? ? human Homo 'ubiquitin B' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 Escherichia ? ? 'Escherichia coli' ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pTYB2 ? 'propylamine added by intein-mediated ligation' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 1 UNP OTU1_YEAST P43558 91 ;KRVLKSTEMSIGGSGENVLSVHPVLDDNSCLFHAIAYGIFKQDSVRDLREMVSKEVLNNPVKFNDAILDKPNKDYAQWIL KMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNEDKFDNYILILFNGIHYDSLTMNEFKTVFNKNQPESDDVLTAAL QLASNLKQTGYSFNTHKAQIKCNTCQMTFVGEREVARHAESTGHVDFGQNR ; ? 2 2 UNP UBIQ_HUMAN P62988 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3BY4 A 2 ? 212 ? P43558 91 ? 301 ? 91 301 2 2 3BY4 B 1 ? 75 ? P62988 1 ? 75 ? 1 75 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 3BY4 _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P43558 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 90 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 3CN non-polymer . 3-AMINOPROPANE ? 'C3 H9 N' 59.110 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 2 _exptl.entry_id 3BY4 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_percent_sol 47.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'Bis-Tris, Magnesium Chloride, PEG 3350, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 CCD MARRESEARCH 2005-03-25 ? 2 CCD MARRESEARCH 2005-03-25 ? # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.monochromator _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_scattering_type 1 MAD 'Si 111 CHANNEL' 1 M x-ray 2 'SINGLE WAVELENGTH' 'Si 111 CHANNEL' 1 M x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.0722 1.0 2 1.7025 1.0 3 1.0450 1.0 4 0.9795 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline 1 SYNCHROTRON 'APS BEAMLINE 19-ID' '1.0722, 1.7025, 1.0450' ? APS 19-ID 2 SYNCHROTRON 'APS BEAMLINE 18-ID' 0.9795 ? APS 18-ID # _reflns.entry_id 3BY4 _reflns.d_resolution_high 1.550 _reflns.d_resolution_low 37.990 _reflns.number_obs 44240 _reflns.pdbx_Rmerge_I_obs 0.037 _reflns.pdbx_netI_over_sigmaI 31.200 _reflns.pdbx_chi_squared 1.034 _reflns.pdbx_redundancy 6.600 _reflns.percent_possible_obs 99.200 _reflns.number_all ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1,2 _reflns.pdbx_ordinal 1 # _refine.entry_id 3BY4 _refine.ls_d_res_high 1.550 _refine.ls_d_res_low 37.990 _refine.ls_percent_reflns_obs 99.130 _refine.ls_number_reflns_obs 44240 _refine.ls_R_factor_obs 0.191 _refine.ls_R_factor_R_work 0.189 _refine.ls_R_factor_R_free 0.211 _refine.ls_percent_reflns_R_free 5.020 _refine.ls_number_reflns_R_free 2221 _refine.B_iso_mean 32.260 _refine.aniso_B[1][1] -1.179 _refine.aniso_B[2][2] 0.313 _refine.aniso_B[3][3] 0.465 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] -0.000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.110 _refine.pdbx_solvent_shrinkage_radii 0.900 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values MLHL _refine.B_iso_max 11.530 _refine.B_iso_min 119.600 _refine.ls_R_factor_all ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.details ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_ion_probe_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1956 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 2104 _refine_hist.d_res_high 1.550 _refine_hist.d_res_low 37.990 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 1992 0.005 ? ? 'X-RAY DIFFRACTION' ? f_angle_d 2686 0.851 ? ? 'X-RAY DIFFRACTION' ? f_chiral_restr 310 0.056 ? ? 'X-RAY DIFFRACTION' ? f_plane_restr 345 0.003 ? ? 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 737 15.297 ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.550 1.584 16 90.000 2375 . 0.227 0.296 . 120 . 2495 . . 'X-RAY DIFFRACTION' 1.584 1.621 16 97.000 2495 . 0.205 0.277 . 158 . 2653 . . 'X-RAY DIFFRACTION' 1.621 1.661 16 100.000 2607 . 0.181 0.250 . 130 . 2737 . . 'X-RAY DIFFRACTION' 1.661 1.706 16 100.000 2618 . 0.163 0.228 . 151 . 2769 . . 'X-RAY DIFFRACTION' 1.706 1.756 16 100.000 2600 . 0.149 0.219 . 134 . 2734 . . 'X-RAY DIFFRACTION' 1.756 1.813 16 100.000 2610 . 0.144 0.211 . 132 . 2742 . . 'X-RAY DIFFRACTION' 1.813 1.878 16 100.000 2645 . 0.138 0.197 . 133 . 2778 . . 'X-RAY DIFFRACTION' 1.878 1.953 16 100.000 2625 . 0.134 0.163 . 124 . 2749 . . 'X-RAY DIFFRACTION' 1.953 2.042 16 100.000 2615 . 0.144 0.202 . 169 . 2784 . . 'X-RAY DIFFRACTION' 2.042 2.149 16 100.000 2617 . 0.144 0.196 . 150 . 2767 . . 'X-RAY DIFFRACTION' 2.149 2.284 16 100.000 2670 . 0.153 0.180 . 122 . 2792 . . 'X-RAY DIFFRACTION' 2.284 2.460 16 100.000 2658 . 0.164 0.188 . 132 . 2790 . . 'X-RAY DIFFRACTION' 2.460 2.708 16 100.000 2674 . 0.177 0.193 . 143 . 2817 . . 'X-RAY DIFFRACTION' 2.708 3.099 16 100.000 2694 . 0.200 0.234 . 118 . 2812 . . 'X-RAY DIFFRACTION' 3.099 3.905 16 100.000 2701 . 0.191 0.195 . 143 . 2844 . . 'X-RAY DIFFRACTION' 3.905 38.001 16 99.000 2815 . 0.216 0.205 . 162 . 2977 . . 'X-RAY DIFFRACTION' # _struct.entry_id 3BY4 _struct.title 'Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin' _struct.pdbx_descriptor 'Ubiquitin thioesterase OTU1 (E.C.3.4.19.12)/Ubiquitin' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3BY4 _struct_keywords.text 'ubiquitin hydrolase, deubiquitinase, CELL CYCLE, HYDROLASE' _struct_keywords.pdbx_keywords 'CELL CYCLE, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 30 ? LYS A 42 ? SER A 119 LYS A 131 1 ? 13 HELX_P HELX_P2 2 VAL A 46 ? ASN A 60 ? VAL A 135 ASN A 149 1 ? 15 HELX_P HELX_P3 3 ASN A 65 ? ASP A 70 ? ASN A 154 ASP A 159 1 ? 6 HELX_P HELX_P4 4 PRO A 72 ? ILE A 80 ? PRO A 161 ILE A 169 1 ? 9 HELX_P HELX_P5 5 GLY A 88 ? ALA A 100 ? GLY A 177 ALA A 189 1 ? 13 HELX_P HELX_P6 6 GLU A 152 ? THR A 170 ? GLU A 241 THR A 259 1 ? 19 HELX_P HELX_P7 7 THR B 22 ? GLY B 35 ? THR B 22 GLY B 35 1 ? 14 HELX_P HELX_P8 8 PRO B 37 ? ASP B 39 ? PRO B 37 ASP B 39 5 ? 3 HELX_P HELX_P9 9 THR B 55 ? ASN B 60 ? THR B 55 ASN B 60 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id GLY _struct_conn.ptnr1_label_seq_id 75 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id 3CN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id ND _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id GLY _struct_conn.ptnr1_auth_seq_id 75 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id 3CN _struct_conn.ptnr2_auth_seq_id 77 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.337 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 9 ? ILE A 12 ? GLU A 98 ILE A 101 A 2 ASN A 18 ? HIS A 23 ? ASN A 107 HIS A 112 A 3 TYR A 134 ? MET A 139 ? TYR A 223 MET A 228 A 4 ASN A 123 ? PHE A 129 ? ASN A 212 PHE A 218 A 5 ALA A 102 ? ASP A 107 ? ALA A 191 ASP A 196 A 6 LYS A 112 ? PHE A 116 ? LYS A 201 PHE A 205 B 1 GLU A 9 ? ILE A 12 ? GLU A 98 ILE A 101 B 2 ASN A 18 ? HIS A 23 ? ASN A 107 HIS A 112 B 3 TYR A 134 ? MET A 139 ? TYR A 223 MET A 228 B 4 ASN A 123 ? PHE A 129 ? ASN A 212 PHE A 218 B 5 PHE A 146 ? ASN A 147 ? PHE A 235 ASN A 236 C 1 THR B 12 ? GLU B 16 ? THR B 12 GLU B 16 C 2 GLN B 2 ? LYS B 6 ? GLN B 2 LYS B 6 C 3 THR B 66 ? LEU B 71 ? THR B 66 LEU B 71 C 4 GLN B 41 ? PHE B 45 ? GLN B 41 PHE B 45 C 5 LYS B 48 ? GLN B 49 ? LYS B 48 GLN B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MET A 10 ? N MET A 99 O LEU A 20 ? O LEU A 109 A 2 3 N HIS A 23 ? N HIS A 112 O SER A 136 ? O SER A 225 A 3 4 O ASP A 135 ? O ASP A 224 N LEU A 128 ? N LEU A 217 A 4 5 O ILE A 127 ? O ILE A 216 N VAL A 106 ? N VAL A 195 A 5 6 N VAL A 105 ? N VAL A 194 O GLU A 114 ? O GLU A 203 B 1 2 N MET A 10 ? N MET A 99 O LEU A 20 ? O LEU A 109 B 2 3 N HIS A 23 ? N HIS A 112 O SER A 136 ? O SER A 225 B 3 4 O ASP A 135 ? O ASP A 224 N LEU A 128 ? N LEU A 217 B 4 5 N TYR A 124 ? N TYR A 213 O PHE A 146 ? O PHE A 235 C 1 2 O LEU B 15 ? O LEU B 15 N ILE B 3 ? N ILE B 3 C 2 3 N PHE B 4 ? N PHE B 4 O LEU B 67 ? O LEU B 67 C 3 4 O HIS B 68 ? O HIS B 68 N ILE B 44 ? N ILE B 44 C 4 5 N PHE B 45 ? N PHE B 45 O LYS B 48 ? O LYS B 48 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 7 _struct_site.details 'BINDING SITE FOR RESIDUE 3CN B 77' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 28 ? ASP A 117 . ? 1_555 ? 2 AC1 7 ASN A 29 ? ASN A 118 . ? 1_555 ? 3 AC1 7 CYS A 31 ? CYS A 120 . ? 1_555 ? 4 AC1 7 TRP A 86 ? TRP A 175 . ? 1_555 ? 5 AC1 7 ILE A 132 ? ILE A 221 . ? 1_555 ? 6 AC1 7 HIS A 133 ? HIS A 222 . ? 1_555 ? 7 AC1 7 GLY B 75 ? GLY B 75 . ? 1_555 ? # _atom_sites.entry_id 3BY4 _atom_sites.fract_transf_matrix[1][1] 0.021596 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013658 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011251 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 90 ? ? ? A . n A 1 2 LYS 2 91 ? ? ? A . n A 1 3 ARG 3 92 92 ARG ARG A . n A 1 4 VAL 4 93 93 VAL VAL A . n A 1 5 LEU 5 94 94 LEU LEU A . n A 1 6 LYS 6 95 95 LYS LYS A . n A 1 7 SER 7 96 96 SER SER A . n A 1 8 THR 8 97 97 THR THR A . n A 1 9 GLU 9 98 98 GLU GLU A . n A 1 10 MET 10 99 99 MET MET A . n A 1 11 SER 11 100 100 SER SER A . n A 1 12 ILE 12 101 101 ILE ILE A . n A 1 13 GLY 13 102 102 GLY GLY A . n A 1 14 GLY 14 103 103 GLY GLY A . n A 1 15 SER 15 104 104 SER SER A . n A 1 16 GLY 16 105 105 GLY GLY A . n A 1 17 GLU 17 106 106 GLU GLU A . n A 1 18 ASN 18 107 107 ASN ASN A . n A 1 19 VAL 19 108 108 VAL VAL A . n A 1 20 LEU 20 109 109 LEU LEU A . n A 1 21 SER 21 110 110 SER SER A . n A 1 22 VAL 22 111 111 VAL VAL A . n A 1 23 HIS 23 112 112 HIS HIS A . n A 1 24 PRO 24 113 113 PRO PRO A . n A 1 25 VAL 25 114 114 VAL VAL A . n A 1 26 LEU 26 115 115 LEU LEU A . n A 1 27 ASP 27 116 116 ASP ASP A . n A 1 28 ASP 28 117 117 ASP ASP A . n A 1 29 ASN 29 118 118 ASN ASN A . n A 1 30 SER 30 119 119 SER SER A . n A 1 31 CYS 31 120 120 CYS CYS A . n A 1 32 LEU 32 121 121 LEU LEU A . n A 1 33 PHE 33 122 122 PHE PHE A . n A 1 34 HIS 34 123 123 HIS HIS A . n A 1 35 ALA 35 124 124 ALA ALA A . n A 1 36 ILE 36 125 125 ILE ILE A . n A 1 37 ALA 37 126 126 ALA ALA A . n A 1 38 TYR 38 127 127 TYR TYR A . n A 1 39 GLY 39 128 128 GLY GLY A . n A 1 40 ILE 40 129 129 ILE ILE A . n A 1 41 PHE 41 130 130 PHE PHE A . n A 1 42 LYS 42 131 131 LYS LYS A . n A 1 43 GLN 43 132 132 GLN GLN A . n A 1 44 ASP 44 133 133 ASP ASP A . n A 1 45 SER 45 134 134 SER SER A . n A 1 46 VAL 46 135 135 VAL VAL A . n A 1 47 ARG 47 136 136 ARG ARG A . n A 1 48 ASP 48 137 137 ASP ASP A . n A 1 49 LEU 49 138 138 LEU LEU A . n A 1 50 ARG 50 139 139 ARG ARG A . n A 1 51 GLU 51 140 140 GLU GLU A . n A 1 52 MET 52 141 141 MET MET A . n A 1 53 VAL 53 142 142 VAL VAL A . n A 1 54 SER 54 143 143 SER SER A . n A 1 55 LYS 55 144 144 LYS LYS A . n A 1 56 GLU 56 145 145 GLU GLU A . n A 1 57 VAL 57 146 146 VAL VAL A . n A 1 58 LEU 58 147 147 LEU LEU A . n A 1 59 ASN 59 148 148 ASN ASN A . n A 1 60 ASN 60 149 149 ASN ASN A . n A 1 61 PRO 61 150 150 PRO PRO A . n A 1 62 VAL 62 151 151 VAL VAL A . n A 1 63 LYS 63 152 152 LYS LYS A . n A 1 64 PHE 64 153 153 PHE PHE A . n A 1 65 ASN 65 154 154 ASN ASN A . n A 1 66 ASP 66 155 155 ASP ASP A . n A 1 67 ALA 67 156 156 ALA ALA A . n A 1 68 ILE 68 157 157 ILE ILE A . n A 1 69 LEU 69 158 158 LEU LEU A . n A 1 70 ASP 70 159 159 ASP ASP A . n A 1 71 LYS 71 160 160 LYS LYS A . n A 1 72 PRO 72 161 161 PRO PRO A . n A 1 73 ASN 73 162 162 ASN ASN A . n A 1 74 LYS 74 163 163 LYS LYS A . n A 1 75 ASP 75 164 164 ASP ASP A . n A 1 76 TYR 76 165 165 TYR TYR A . n A 1 77 ALA 77 166 166 ALA ALA A . n A 1 78 GLN 78 167 167 GLN GLN A . n A 1 79 TRP 79 168 168 TRP TRP A . n A 1 80 ILE 80 169 169 ILE ILE A . n A 1 81 LEU 81 170 170 LEU LEU A . n A 1 82 LYS 82 171 171 LYS LYS A . n A 1 83 MET 83 172 172 MET MET A . n A 1 84 GLU 84 173 173 GLU GLU A . n A 1 85 SER 85 174 174 SER SER A . n A 1 86 TRP 86 175 175 TRP TRP A . n A 1 87 GLY 87 176 176 GLY GLY A . n A 1 88 GLY 88 177 177 GLY GLY A . n A 1 89 ALA 89 178 178 ALA ALA A . n A 1 90 ILE 90 179 179 ILE ILE A . n A 1 91 GLU 91 180 180 GLU GLU A . n A 1 92 ILE 92 181 181 ILE ILE A . n A 1 93 GLY 93 182 182 GLY GLY A . n A 1 94 ILE 94 183 183 ILE ILE A . n A 1 95 ILE 95 184 184 ILE ILE A . n A 1 96 SER 96 185 185 SER SER A . n A 1 97 ASP 97 186 186 ASP ASP A . n A 1 98 ALA 98 187 187 ALA ALA A . n A 1 99 LEU 99 188 188 LEU LEU A . n A 1 100 ALA 100 189 189 ALA ALA A . n A 1 101 VAL 101 190 190 VAL VAL A . n A 1 102 ALA 102 191 191 ALA ALA A . n A 1 103 ILE 103 192 192 ILE ILE A . n A 1 104 TYR 104 193 193 TYR TYR A . n A 1 105 VAL 105 194 194 VAL VAL A . n A 1 106 VAL 106 195 195 VAL VAL A . n A 1 107 ASP 107 196 196 ASP ASP A . n A 1 108 ILE 108 197 197 ILE ILE A . n A 1 109 ASP 109 198 198 ASP ASP A . n A 1 110 ALA 110 199 199 ALA ALA A . n A 1 111 VAL 111 200 200 VAL VAL A . n A 1 112 LYS 112 201 201 LYS LYS A . n A 1 113 ILE 113 202 202 ILE ILE A . n A 1 114 GLU 114 203 203 GLU GLU A . n A 1 115 LYS 115 204 204 LYS LYS A . n A 1 116 PHE 116 205 205 PHE PHE A . n A 1 117 ASN 117 206 206 ASN ASN A . n A 1 118 GLU 118 207 207 GLU GLU A . n A 1 119 ASP 119 208 208 ASP ASP A . n A 1 120 LYS 120 209 209 LYS LYS A . n A 1 121 PHE 121 210 210 PHE PHE A . n A 1 122 ASP 122 211 211 ASP ASP A . n A 1 123 ASN 123 212 212 ASN ASN A . n A 1 124 TYR 124 213 213 TYR TYR A . n A 1 125 ILE 125 214 214 ILE ILE A . n A 1 126 LEU 126 215 215 LEU LEU A . n A 1 127 ILE 127 216 216 ILE ILE A . n A 1 128 LEU 128 217 217 LEU LEU A . n A 1 129 PHE 129 218 218 PHE PHE A . n A 1 130 ASN 130 219 219 ASN ASN A . n A 1 131 GLY 131 220 220 GLY GLY A . n A 1 132 ILE 132 221 221 ILE ILE A . n A 1 133 HIS 133 222 222 HIS HIS A . n A 1 134 TYR 134 223 223 TYR TYR A . n A 1 135 ASP 135 224 224 ASP ASP A . n A 1 136 SER 136 225 225 SER SER A . n A 1 137 LEU 137 226 226 LEU LEU A . n A 1 138 THR 138 227 227 THR THR A . n A 1 139 MET 139 228 228 MET MET A . n A 1 140 ASN 140 229 229 ASN ASN A . n A 1 141 GLU 141 230 230 GLU GLU A . n A 1 142 PHE 142 231 231 PHE PHE A . n A 1 143 LYS 143 232 232 LYS LYS A . n A 1 144 THR 144 233 233 THR THR A . n A 1 145 VAL 145 234 234 VAL VAL A . n A 1 146 PHE 146 235 235 PHE PHE A . n A 1 147 ASN 147 236 236 ASN ASN A . n A 1 148 LYS 148 237 237 LYS LYS A . n A 1 149 ASN 149 238 238 ASN ASN A . n A 1 150 GLN 150 239 239 GLN GLN A . n A 1 151 PRO 151 240 240 PRO PRO A . n A 1 152 GLU 152 241 241 GLU GLU A . n A 1 153 SER 153 242 242 SER SER A . n A 1 154 ASP 154 243 243 ASP ASP A . n A 1 155 ASP 155 244 244 ASP ASP A . n A 1 156 VAL 156 245 245 VAL VAL A . n A 1 157 LEU 157 246 246 LEU LEU A . n A 1 158 THR 158 247 247 THR THR A . n A 1 159 ALA 159 248 248 ALA ALA A . n A 1 160 ALA 160 249 249 ALA ALA A . n A 1 161 LEU 161 250 250 LEU LEU A . n A 1 162 GLN 162 251 251 GLN GLN A . n A 1 163 LEU 163 252 252 LEU LEU A . n A 1 164 ALA 164 253 253 ALA ALA A . n A 1 165 SER 165 254 254 SER SER A . n A 1 166 ASN 166 255 255 ASN ASN A . n A 1 167 LEU 167 256 256 LEU LEU A . n A 1 168 LYS 168 257 257 LYS LYS A . n A 1 169 GLN 169 258 258 GLN GLN A . n A 1 170 THR 170 259 259 THR THR A . n A 1 171 GLY 171 260 260 GLY GLY A . n A 1 172 TYR 172 261 261 TYR TYR A . n A 1 173 SER 173 262 262 SER SER A . n A 1 174 PHE 174 263 263 PHE PHE A . n A 1 175 ASN 175 264 ? ? ? A . n A 1 176 THR 176 265 ? ? ? A . n A 1 177 HIS 177 266 ? ? ? A . n A 1 178 LYS 178 267 ? ? ? A . n A 1 179 ALA 179 268 ? ? ? A . n A 1 180 GLN 180 269 ? ? ? A . n A 1 181 ILE 181 270 ? ? ? A . n A 1 182 LYS 182 271 ? ? ? A . n A 1 183 CYS 183 272 ? ? ? A . n A 1 184 ASN 184 273 ? ? ? A . n A 1 185 THR 185 274 ? ? ? A . n A 1 186 CYS 186 275 ? ? ? A . n A 1 187 GLN 187 276 ? ? ? A . n A 1 188 MET 188 277 ? ? ? A . n A 1 189 THR 189 278 ? ? ? A . n A 1 190 PHE 190 279 ? ? ? A . n A 1 191 VAL 191 280 ? ? ? A . n A 1 192 GLY 192 281 ? ? ? A . n A 1 193 GLU 193 282 ? ? ? A . n A 1 194 ARG 194 283 ? ? ? A . n A 1 195 GLU 195 284 ? ? ? A . n A 1 196 VAL 196 285 ? ? ? A . n A 1 197 ALA 197 286 ? ? ? A . n A 1 198 ARG 198 287 ? ? ? A . n A 1 199 HIS 199 288 ? ? ? A . n A 1 200 ALA 200 289 ? ? ? A . n A 1 201 GLU 201 290 ? ? ? A . n A 1 202 SER 202 291 ? ? ? A . n A 1 203 THR 203 292 ? ? ? A . n A 1 204 GLY 204 293 ? ? ? A . n A 1 205 HIS 205 294 ? ? ? A . n A 1 206 VAL 206 295 ? ? ? A . n A 1 207 ASP 207 296 ? ? ? A . n A 1 208 PHE 208 297 ? ? ? A . n A 1 209 GLY 209 298 ? ? ? A . n A 1 210 GLN 210 299 ? ? ? A . n A 1 211 ASN 211 300 ? ? ? A . n A 1 212 ARG 212 301 ? ? ? A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 ILE 3 3 3 ILE ILE B . n B 2 4 PHE 4 4 4 PHE PHE B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 LYS 6 6 6 LYS LYS B . n B 2 7 THR 7 7 7 THR THR B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 THR 9 9 9 THR THR B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 THR 12 12 12 THR THR B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 LEU 15 15 15 LEU LEU B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 VAL 17 17 17 VAL VAL B . n B 2 18 GLU 18 18 18 GLU GLU B . n B 2 19 PRO 19 19 19 PRO PRO B . n B 2 20 SER 20 20 20 SER SER B . n B 2 21 ASP 21 21 21 ASP ASP B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 ILE 23 23 23 ILE ILE B . n B 2 24 GLU 24 24 24 GLU GLU B . n B 2 25 ASN 25 25 25 ASN ASN B . n B 2 26 VAL 26 26 26 VAL VAL B . n B 2 27 LYS 27 27 27 LYS LYS B . n B 2 28 ALA 28 28 28 ALA ALA B . n B 2 29 LYS 29 29 29 LYS LYS B . n B 2 30 ILE 30 30 30 ILE ILE B . n B 2 31 GLN 31 31 31 GLN GLN B . n B 2 32 ASP 32 32 32 ASP ASP B . n B 2 33 LYS 33 33 33 LYS LYS B . n B 2 34 GLU 34 34 34 GLU GLU B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 ILE 36 36 36 ILE ILE B . n B 2 37 PRO 37 37 37 PRO PRO B . n B 2 38 PRO 38 38 38 PRO PRO B . n B 2 39 ASP 39 39 39 ASP ASP B . n B 2 40 GLN 40 40 40 GLN GLN B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 ARG 42 42 42 ARG ARG B . n B 2 43 LEU 43 43 43 LEU LEU B . n B 2 44 ILE 44 44 44 ILE ILE B . n B 2 45 PHE 45 45 45 PHE PHE B . n B 2 46 ALA 46 46 46 ALA ALA B . n B 2 47 GLY 47 47 47 GLY GLY B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 GLN 49 49 49 GLN GLN B . n B 2 50 LEU 50 50 50 LEU LEU B . n B 2 51 GLU 51 51 51 GLU GLU B . n B 2 52 ASP 52 52 52 ASP ASP B . n B 2 53 GLY 53 53 53 GLY GLY B . n B 2 54 ARG 54 54 54 ARG ARG B . n B 2 55 THR 55 55 55 THR THR B . n B 2 56 LEU 56 56 56 LEU LEU B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 ASP 58 58 58 ASP ASP B . n B 2 59 TYR 59 59 59 TYR TYR B . n B 2 60 ASN 60 60 60 ASN ASN B . n B 2 61 ILE 61 61 61 ILE ILE B . n B 2 62 GLN 62 62 62 GLN GLN B . n B 2 63 LYS 63 63 63 LYS LYS B . n B 2 64 GLU 64 64 64 GLU GLU B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 THR 66 66 66 THR THR B . n B 2 67 LEU 67 67 67 LEU LEU B . n B 2 68 HIS 68 68 68 HIS HIS B . n B 2 69 LEU 69 69 69 LEU LEU B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 LEU 71 71 71 LEU LEU B . n B 2 72 ARG 72 72 72 ARG ARG B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 ARG 74 74 74 ARG ARG B . n B 2 75 GLY 75 75 75 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 3CN 1 77 76 3CN 3CN B . D 4 HOH 1 302 1 HOH HOH A . D 4 HOH 2 303 4 HOH HOH A . D 4 HOH 3 304 5 HOH HOH A . D 4 HOH 4 305 6 HOH HOH A . D 4 HOH 5 306 8 HOH HOH A . D 4 HOH 6 307 9 HOH HOH A . D 4 HOH 7 308 12 HOH HOH A . D 4 HOH 8 309 14 HOH HOH A . D 4 HOH 9 310 15 HOH HOH A . D 4 HOH 10 311 16 HOH HOH A . D 4 HOH 11 312 17 HOH HOH A . D 4 HOH 12 313 18 HOH HOH A . D 4 HOH 13 314 19 HOH HOH A . D 4 HOH 14 315 20 HOH HOH A . D 4 HOH 15 316 21 HOH HOH A . D 4 HOH 16 317 22 HOH HOH A . D 4 HOH 17 318 23 HOH HOH A . D 4 HOH 18 319 24 HOH HOH A . D 4 HOH 19 320 25 HOH HOH A . D 4 HOH 20 321 26 HOH HOH A . D 4 HOH 21 322 27 HOH HOH A . D 4 HOH 22 323 28 HOH HOH A . D 4 HOH 23 324 29 HOH HOH A . D 4 HOH 24 325 30 HOH HOH A . D 4 HOH 25 326 32 HOH HOH A . D 4 HOH 26 327 33 HOH HOH A . D 4 HOH 27 328 34 HOH HOH A . D 4 HOH 28 329 35 HOH HOH A . D 4 HOH 29 330 36 HOH HOH A . D 4 HOH 30 331 37 HOH HOH A . D 4 HOH 31 332 38 HOH HOH A . D 4 HOH 32 333 39 HOH HOH A . D 4 HOH 33 334 40 HOH HOH A . D 4 HOH 34 335 41 HOH HOH A . D 4 HOH 35 336 42 HOH HOH A . D 4 HOH 36 337 43 HOH HOH A . D 4 HOH 37 338 44 HOH HOH A . D 4 HOH 38 339 45 HOH HOH A . D 4 HOH 39 340 46 HOH HOH A . D 4 HOH 40 341 47 HOH HOH A . D 4 HOH 41 342 48 HOH HOH A . D 4 HOH 42 343 49 HOH HOH A . D 4 HOH 43 344 51 HOH HOH A . D 4 HOH 44 345 52 HOH HOH A . D 4 HOH 45 346 53 HOH HOH A . D 4 HOH 46 347 54 HOH HOH A . D 4 HOH 47 348 55 HOH HOH A . D 4 HOH 48 349 56 HOH HOH A . D 4 HOH 49 350 57 HOH HOH A . D 4 HOH 50 351 59 HOH HOH A . D 4 HOH 51 352 60 HOH HOH A . D 4 HOH 52 353 61 HOH HOH A . D 4 HOH 53 354 62 HOH HOH A . D 4 HOH 54 355 64 HOH HOH A . D 4 HOH 55 356 66 HOH HOH A . D 4 HOH 56 357 67 HOH HOH A . D 4 HOH 57 358 68 HOH HOH A . D 4 HOH 58 359 69 HOH HOH A . D 4 HOH 59 360 71 HOH HOH A . D 4 HOH 60 361 72 HOH HOH A . D 4 HOH 61 362 73 HOH HOH A . D 4 HOH 62 363 74 HOH HOH A . D 4 HOH 63 364 76 HOH HOH A . D 4 HOH 64 365 78 HOH HOH A . D 4 HOH 65 366 79 HOH HOH A . D 4 HOH 66 367 81 HOH HOH A . D 4 HOH 67 368 82 HOH HOH A . D 4 HOH 68 369 84 HOH HOH A . D 4 HOH 69 370 86 HOH HOH A . D 4 HOH 70 371 88 HOH HOH A . D 4 HOH 71 372 89 HOH HOH A . D 4 HOH 72 373 90 HOH HOH A . D 4 HOH 73 374 91 HOH HOH A . D 4 HOH 74 375 92 HOH HOH A . D 4 HOH 75 376 93 HOH HOH A . D 4 HOH 76 377 94 HOH HOH A . D 4 HOH 77 378 95 HOH HOH A . D 4 HOH 78 379 96 HOH HOH A . D 4 HOH 79 380 97 HOH HOH A . D 4 HOH 80 381 98 HOH HOH A . D 4 HOH 81 382 99 HOH HOH A . D 4 HOH 82 383 101 HOH HOH A . D 4 HOH 83 384 102 HOH HOH A . D 4 HOH 84 385 103 HOH HOH A . D 4 HOH 85 386 104 HOH HOH A . D 4 HOH 86 387 105 HOH HOH A . D 4 HOH 87 388 108 HOH HOH A . D 4 HOH 88 389 109 HOH HOH A . D 4 HOH 89 390 112 HOH HOH A . D 4 HOH 90 391 113 HOH HOH A . D 4 HOH 91 392 115 HOH HOH A . D 4 HOH 92 393 116 HOH HOH A . D 4 HOH 93 394 117 HOH HOH A . D 4 HOH 94 395 118 HOH HOH A . D 4 HOH 95 396 119 HOH HOH A . D 4 HOH 96 397 120 HOH HOH A . D 4 HOH 97 398 122 HOH HOH A . D 4 HOH 98 399 123 HOH HOH A . D 4 HOH 99 400 124 HOH HOH A . D 4 HOH 100 401 125 HOH HOH A . D 4 HOH 101 402 126 HOH HOH A . D 4 HOH 102 403 127 HOH HOH A . D 4 HOH 103 404 128 HOH HOH A . D 4 HOH 104 405 129 HOH HOH A . D 4 HOH 105 406 130 HOH HOH A . D 4 HOH 106 407 132 HOH HOH A . D 4 HOH 107 408 133 HOH HOH A . D 4 HOH 108 409 135 HOH HOH A . D 4 HOH 109 410 136 HOH HOH A . D 4 HOH 110 411 137 HOH HOH A . D 4 HOH 111 412 140 HOH HOH A . D 4 HOH 112 413 141 HOH HOH A . D 4 HOH 113 414 142 HOH HOH A . D 4 HOH 114 415 144 HOH HOH A . D 4 HOH 115 416 145 HOH HOH A . D 4 HOH 116 417 146 HOH HOH A . D 4 HOH 117 418 147 HOH HOH A . D 4 HOH 118 419 148 HOH HOH A . D 4 HOH 119 420 150 HOH HOH A . D 4 HOH 120 421 151 HOH HOH A . D 4 HOH 121 422 152 HOH HOH A . D 4 HOH 122 423 153 HOH HOH A . D 4 HOH 123 424 157 HOH HOH A . D 4 HOH 124 425 158 HOH HOH A . E 4 HOH 1 78 2 HOH HOH B . E 4 HOH 2 79 3 HOH HOH B . E 4 HOH 3 80 7 HOH HOH B . E 4 HOH 4 81 10 HOH HOH B . E 4 HOH 5 82 11 HOH HOH B . E 4 HOH 6 83 13 HOH HOH B . E 4 HOH 7 84 31 HOH HOH B . E 4 HOH 8 85 50 HOH HOH B . E 4 HOH 9 86 58 HOH HOH B . E 4 HOH 10 87 63 HOH HOH B . E 4 HOH 11 88 65 HOH HOH B . E 4 HOH 12 89 75 HOH HOH B . E 4 HOH 13 90 77 HOH HOH B . E 4 HOH 14 91 85 HOH HOH B . E 4 HOH 15 92 107 HOH HOH B . E 4 HOH 16 93 114 HOH HOH B . E 4 HOH 17 94 121 HOH HOH B . E 4 HOH 18 95 138 HOH HOH B . E 4 HOH 19 96 139 HOH HOH B . E 4 HOH 20 97 156 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2200 ? 1 MORE -12 ? 1 'SSA (A^2)' 11650 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.550 _diffrn_reflns.pdbx_d_res_low 20.000 _diffrn_reflns.pdbx_number_obs 39220 _diffrn_reflns.pdbx_Rmerge_I_obs 0.095 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.04 _diffrn_reflns.av_sigmaI_over_netI 21.30 _diffrn_reflns.pdbx_redundancy 7.50 _diffrn_reflns.pdbx_percent_possible_obs 99.90 _diffrn_reflns.number 295410 # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.30 20.00 ? ? 0.114 ? 1.089 7.80 99.00 1 3.42 4.30 ? ? 0.081 ? 1.025 7.20 99.90 1 2.99 3.42 ? ? 0.074 ? 1.097 7.50 99.90 1 2.71 2.99 ? ? 0.077 ? 1.051 7.60 100.00 1 2.52 2.71 ? ? 0.080 ? 1.096 7.60 99.90 1 2.37 2.52 ? ? 0.088 ? 1.021 7.60 100.00 1 2.25 2.37 ? ? 0.099 ? 1.003 7.60 100.00 1 2.15 2.25 ? ? 0.128 ? 1.023 7.50 100.00 1 2.07 2.15 ? ? 0.137 ? 1.026 7.50 100.00 1 2.00 2.07 ? ? 0.164 ? 1.015 7.50 100.00 # loop_ _pdbx_phasing_MAD_set.id _pdbx_phasing_MAD_set.d_res_low _pdbx_phasing_MAD_set.d_res_high _pdbx_phasing_MAD_set.reflns_acentric _pdbx_phasing_MAD_set.reflns_centric _pdbx_phasing_MAD_set.power_acentric _pdbx_phasing_MAD_set.power_centric ISO_1 37.99 1.55 39826 4339 0.000 0.000 ISO_2 37.99 1.55 32188 3824 0.263 0.252 ISO_3 37.99 1.55 35837 4089 0.584 0.617 ANO_1 37.99 1.55 39778 0 1.370 0.000 ANO_2 37.99 1.55 32176 0 0.684 0.000 ANO_3 37.99 1.55 35858 0 0.727 0.000 # loop_ _pdbx_phasing_MAD_set_shell.id _pdbx_phasing_MAD_set_shell.d_res_low _pdbx_phasing_MAD_set_shell.d_res_high _pdbx_phasing_MAD_set_shell.reflns_acentric _pdbx_phasing_MAD_set_shell.reflns_centric _pdbx_phasing_MAD_set_shell.power_acentric _pdbx_phasing_MAD_set_shell.power_centric ISO_1 37.99 6.82 375 192 0.000 0.000 ISO_1 6.82 4.87 765 224 0.000 0.000 ISO_1 4.87 3.98 1015 223 0.000 0.000 ISO_1 3.98 3.45 1209 216 0.000 0.000 ISO_1 3.45 3.09 1394 220 0.000 0.000 ISO_1 3.09 2.82 1555 220 0.000 0.000 ISO_1 2.82 2.62 1690 218 0.000 0.000 ISO_1 2.62 2.45 1826 227 0.000 0.000 ISO_1 2.45 2.31 1963 233 0.000 0.000 ISO_1 2.31 2.19 2081 223 0.000 0.000 ISO_1 2.19 2.09 2180 228 0.000 0.000 ISO_1 2.09 2.00 2286 230 0.000 0.000 ISO_1 2.00 1.92 2392 221 0.000 0.000 ISO_1 1.92 1.85 2490 217 0.000 0.000 ISO_1 1.85 1.79 2590 223 0.000 0.000 ISO_1 1.79 1.73 2703 229 0.000 0.000 ISO_1 1.73 1.68 2757 230 0.000 0.000 ISO_1 1.68 1.63 2850 227 0.000 0.000 ISO_1 1.63 1.59 2892 189 0.000 0.000 ISO_1 1.59 1.55 2813 149 0.000 0.000 ANO_1 37.99 6.82 371 0 3.073 0.000 ANO_1 6.82 4.87 765 0 4.413 0.000 ANO_1 4.87 3.98 1015 0 2.910 0.000 ANO_1 3.98 3.45 1208 0 2.374 0.000 ANO_1 3.45 3.09 1394 0 2.221 0.000 ANO_1 3.09 2.82 1554 0 2.073 0.000 ANO_1 2.82 2.62 1689 0 1.864 0.000 ANO_1 2.62 2.45 1823 0 1.574 0.000 ANO_1 2.45 2.31 1963 0 1.268 0.000 ANO_1 2.31 2.19 2080 0 0.964 0.000 ANO_1 2.19 2.09 2180 0 0.760 0.000 ANO_1 2.09 2.00 2285 0 0.599 0.000 ANO_1 2.00 1.92 2392 0 0.485 0.000 ANO_1 1.92 1.85 2489 0 0.361 0.000 ANO_1 1.85 1.79 2590 0 0.291 0.000 ANO_1 1.79 1.73 2703 0 0.240 0.000 ANO_1 1.73 1.68 2756 0 0.197 0.000 ANO_1 1.68 1.63 2850 0 0.171 0.000 ANO_1 1.63 1.59 2876 0 0.132 0.000 ANO_1 1.59 1.55 2795 0 0.116 0.000 ISO_2 37.99 6.82 375 190 0.621 0.489 ISO_2 6.82 4.87 765 223 0.529 0.414 ISO_2 4.87 3.98 1015 221 0.344 0.237 ISO_2 3.98 3.45 1209 210 0.296 0.221 ISO_2 3.45 3.09 1394 217 0.276 0.178 ISO_2 3.09 2.82 1555 220 0.273 0.197 ISO_2 2.82 2.62 1690 217 0.262 0.173 ISO_2 2.62 2.45 1823 227 0.234 0.152 ISO_2 2.45 2.31 1963 233 0.190 0.122 ISO_2 2.31 2.19 2081 223 0.147 0.111 ISO_2 2.19 2.09 2179 228 0.133 0.092 ISO_2 2.09 2.00 2286 229 0.109 0.075 ISO_2 2.00 1.92 2392 221 0.095 0.071 ISO_2 1.92 1.85 2490 217 0.065 0.048 ISO_2 1.85 1.79 2590 222 0.064 0.050 ISO_2 1.79 1.73 2702 228 0.056 0.035 ISO_2 1.73 1.68 2749 229 0.044 0.032 ISO_2 1.68 1.63 930 69 0.039 0.032 ISO_2 1.63 1.59 0 0 0.000 0.000 ISO_2 1.59 1.55 0 0 0.000 0.000 ANO_2 37.99 6.82 376 0 1.745 0.000 ANO_2 6.82 4.87 764 0 3.726 0.000 ANO_2 4.87 3.98 1014 0 2.721 0.000 ANO_2 3.98 3.45 1208 0 2.283 0.000 ANO_2 3.45 3.09 1393 0 2.241 0.000 ANO_2 3.09 2.82 1552 0 1.777 0.000 ANO_2 2.82 2.62 1689 0 1.331 0.000 ANO_2 2.62 2.45 1821 0 0.934 0.000 ANO_2 2.45 2.31 1963 0 0.669 0.000 ANO_2 2.31 2.19 2080 0 0.431 0.000 ANO_2 2.19 2.09 2179 0 0.306 0.000 ANO_2 2.09 2.00 2286 0 0.212 0.000 ANO_2 2.00 1.92 2392 0 0.159 0.000 ANO_2 1.92 1.85 2489 0 0.122 0.000 ANO_2 1.85 1.79 2590 0 0.103 0.000 ANO_2 1.79 1.73 2702 0 0.093 0.000 ANO_2 1.73 1.68 2748 0 0.078 0.000 ANO_2 1.68 1.63 930 0 0.075 0.000 ANO_2 1.63 1.59 0 0 0.000 0.000 ANO_2 1.59 1.55 0 0 0.000 0.000 ISO_3 37.99 6.82 375 188 0.969 1.190 ISO_3 6.82 4.87 765 224 2.436 1.210 ISO_3 4.87 3.98 1015 219 1.821 0.989 ISO_3 3.98 3.45 1209 210 1.680 0.995 ISO_3 3.45 3.09 1391 216 1.607 0.942 ISO_3 3.09 2.82 1553 219 1.425 0.859 ISO_3 2.82 2.62 1684 216 1.208 0.688 ISO_3 2.62 2.45 1826 226 0.938 0.563 ISO_3 2.45 2.31 1963 231 0.707 0.384 ISO_3 2.31 2.19 2081 223 0.510 0.297 ISO_3 2.19 2.09 2180 228 0.387 0.213 ISO_3 2.09 2.00 2286 230 0.265 0.167 ISO_3 2.00 1.92 2392 220 0.198 0.123 ISO_3 1.92 1.85 2490 217 0.141 0.088 ISO_3 1.85 1.79 2590 222 0.113 0.089 ISO_3 1.79 1.73 2702 223 0.091 0.058 ISO_3 1.73 1.68 2755 230 0.071 0.053 ISO_3 1.68 1.63 2850 226 0.056 0.040 ISO_3 1.63 1.59 1730 121 0.047 0.039 ISO_3 1.59 1.55 0 0 0.000 0.000 ANO_3 37.99 6.82 379 0 1.739 0.000 ANO_3 6.82 4.87 765 0 3.266 0.000 ANO_3 4.87 3.98 1015 0 2.635 0.000 ANO_3 3.98 3.45 1209 0 1.926 0.000 ANO_3 3.45 3.09 1393 0 1.996 0.000 ANO_3 3.09 2.82 1557 0 1.705 0.000 ANO_3 2.82 2.62 1683 0 1.426 0.000 ANO_3 2.62 2.45 1827 0 1.029 0.000 ANO_3 2.45 2.31 1962 0 0.764 0.000 ANO_3 2.31 2.19 2081 0 0.529 0.000 ANO_3 2.19 2.09 2180 0 0.387 0.000 ANO_3 2.09 2.00 2286 0 0.284 0.000 ANO_3 2.00 1.92 2392 0 0.211 0.000 ANO_3 1.92 1.85 2490 0 0.160 0.000 ANO_3 1.85 1.79 2590 0 0.129 0.000 ANO_3 1.79 1.73 2702 0 0.105 0.000 ANO_3 1.73 1.68 2755 0 0.089 0.000 ANO_3 1.68 1.63 2850 0 0.079 0.000 ANO_3 1.63 1.59 1742 0 0.072 0.000 ANO_3 1.59 1.55 0 0 0.000 0.000 # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 SHARP . ? package 'de La Fortelle' sharp-develop@globalphasing.com phasing http://babinet.globalphasing.com/sharp/ ? ? 3 SOLOMON . ? program 'Abrahams J. P.' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 SG _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 CYS _pdbx_validate_close_contact.auth_seq_id_1 120 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 CA _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 3CN _pdbx_validate_close_contact.auth_seq_id_2 77 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.80 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 135 ? ? -123.06 -54.44 2 1 PHE A 153 ? ? -102.29 64.62 3 1 PHE A 231 ? ? -150.61 -54.48 4 1 GLN B 62 ? ? -132.44 -154.08 5 1 ARG B 72 ? ? -91.43 -86.08 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 90 ? A MET 1 2 1 Y 1 A LYS 91 ? A LYS 2 3 1 Y 1 A ASN 264 ? A ASN 175 4 1 Y 1 A THR 265 ? A THR 176 5 1 Y 1 A HIS 266 ? A HIS 177 6 1 Y 1 A LYS 267 ? A LYS 178 7 1 Y 1 A ALA 268 ? A ALA 179 8 1 Y 1 A GLN 269 ? A GLN 180 9 1 Y 1 A ILE 270 ? A ILE 181 10 1 Y 1 A LYS 271 ? A LYS 182 11 1 Y 1 A CYS 272 ? A CYS 183 12 1 Y 1 A ASN 273 ? A ASN 184 13 1 Y 1 A THR 274 ? A THR 185 14 1 Y 1 A CYS 275 ? A CYS 186 15 1 Y 1 A GLN 276 ? A GLN 187 16 1 Y 1 A MET 277 ? A MET 188 17 1 Y 1 A THR 278 ? A THR 189 18 1 Y 1 A PHE 279 ? A PHE 190 19 1 Y 1 A VAL 280 ? A VAL 191 20 1 Y 1 A GLY 281 ? A GLY 192 21 1 Y 1 A GLU 282 ? A GLU 193 22 1 Y 1 A ARG 283 ? A ARG 194 23 1 Y 1 A GLU 284 ? A GLU 195 24 1 Y 1 A VAL 285 ? A VAL 196 25 1 Y 1 A ALA 286 ? A ALA 197 26 1 Y 1 A ARG 287 ? A ARG 198 27 1 Y 1 A HIS 288 ? A HIS 199 28 1 Y 1 A ALA 289 ? A ALA 200 29 1 Y 1 A GLU 290 ? A GLU 201 30 1 Y 1 A SER 291 ? A SER 202 31 1 Y 1 A THR 292 ? A THR 203 32 1 Y 1 A GLY 293 ? A GLY 204 33 1 Y 1 A HIS 294 ? A HIS 205 34 1 Y 1 A VAL 295 ? A VAL 206 35 1 Y 1 A ASP 296 ? A ASP 207 36 1 Y 1 A PHE 297 ? A PHE 208 37 1 Y 1 A GLY 298 ? A GLY 209 38 1 Y 1 A GLN 299 ? A GLN 210 39 1 Y 1 A ASN 300 ? A ASN 211 40 1 Y 1 A ARG 301 ? A ARG 212 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 3-AMINOPROPANE 3CN 4 water HOH #