HEADER TRANSCRIPTION REGULATOR 18-JAN-08 3C07 TITLE CRYSTAL STRUCTURE OF A TETR FAMILY TRANSCRIPTIONAL REGULATOR FROM TITLE 2 STREPTOMYCES COELICOLOR A3(2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE TETR-FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR A3(2); SOURCE 3 ORGANISM_TAXID: 100226; SOURCE 4 STRAIN: A3(2) / M145; SOURCE 5 ATCC: BAA-471; SOURCE 6 GENE: SCO4850, SC5G8.18C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: P15TV LIC KEYWDS APC6322, TETR, STREPTOMYCES COELICOLOR A3(2), STRUCTURAL GENOMICS, KEYWDS 2 PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, MCSG, DNA-BINDING, TRANSCRIPTION, TRANSCRIPTION KEYWDS 4 REGULATION, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,X.XU,H.ZHENG,A.SAVCHENKO,A.M.EDWARDS,A.JOACHIMIAK,MIDWEST AUTHOR 2 CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 3C07 1 VERSN REVDAT 2 24-FEB-09 3C07 1 VERSN REVDAT 1 05-FEB-08 3C07 0 SPRSDE 05-FEB-08 3C07 2OFL JRNL AUTH K.TAN,X.XU,H.ZHENG,A.SAVCHENKO,A.M.EDWARDS,A.JOACHIMIAK JRNL TITL THE STRUCTURE OF A TETR FAMILY TRANSCRIPTIONAL REGULATOR JRNL TITL 2 FROM STREPTOMYCES COELICOLOR A3(2). JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 16127 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 854 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1152 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.2240 REMARK 3 BIN FREE R VALUE SET COUNT : 62 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3514 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.44000 REMARK 3 B22 (A**2) : -0.44000 REMARK 3 B33 (A**2) : 0.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.794 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.372 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.298 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 32.242 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.905 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3603 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4874 ; 1.891 ; 1.961 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 433 ; 6.480 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;33.127 ;21.556 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;25.420 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;19.309 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 530 ; 0.135 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2758 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1868 ; 0.258 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2486 ; 0.326 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 122 ; 0.170 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 49 ; 0.241 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.311 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2215 ; 1.240 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3468 ; 2.003 ; 3.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1555 ; 1.359 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1406 ; 2.079 ; 3.000 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 63 REMARK 3 ORIGIN FOR THE GROUP (A): 17.5620 76.3300 108.3420 REMARK 3 T TENSOR REMARK 3 T11: 0.1053 T22: 0.0509 REMARK 3 T33: -0.0635 T12: -0.1088 REMARK 3 T13: 0.1803 T23: -0.0409 REMARK 3 L TENSOR REMARK 3 L11: 5.7942 L22: 11.9661 REMARK 3 L33: 10.4919 L12: -1.0200 REMARK 3 L13: -0.7849 L23: -5.1157 REMARK 3 S TENSOR REMARK 3 S11: -0.0504 S12: 0.3059 S13: 0.5437 REMARK 3 S21: 0.2363 S22: -0.1984 S23: -0.2848 REMARK 3 S31: -0.4847 S32: 0.0801 S33: 0.2489 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 64 A 235 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7510 48.8480 103.6430 REMARK 3 T TENSOR REMARK 3 T11: 0.0164 T22: 0.1904 REMARK 3 T33: -0.2278 T12: -0.1041 REMARK 3 T13: 0.1536 T23: -0.2053 REMARK 3 L TENSOR REMARK 3 L11: 3.2609 L22: 5.2590 REMARK 3 L33: 2.7611 L12: 0.2815 REMARK 3 L13: 0.1977 L23: 1.2324 REMARK 3 S TENSOR REMARK 3 S11: 0.0409 S12: 0.6361 S13: -0.2787 REMARK 3 S21: -0.6433 S22: 0.2208 S23: -0.8559 REMARK 3 S31: -0.0170 S32: 0.1386 S33: -0.2616 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 16 B 63 REMARK 3 ORIGIN FOR THE GROUP (A): 27.5590 58.8420 143.9740 REMARK 3 T TENSOR REMARK 3 T11: -0.0415 T22: 0.5749 REMARK 3 T33: -0.1460 T12: -0.0622 REMARK 3 T13: -0.0651 T23: -0.1978 REMARK 3 L TENSOR REMARK 3 L11: 15.2891 L22: 6.2631 REMARK 3 L33: 11.3372 L12: -2.5319 REMARK 3 L13: 3.3185 L23: -0.3263 REMARK 3 S TENSOR REMARK 3 S11: 0.0297 S12: -1.1463 S13: -0.5035 REMARK 3 S21: 0.0810 S22: -0.2936 S23: 1.1230 REMARK 3 S31: 0.3022 S32: -2.6109 S33: 0.2639 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 64 B 229 REMARK 3 ORIGIN FOR THE GROUP (A): 16.7650 40.1690 125.1280 REMARK 3 T TENSOR REMARK 3 T11: 0.3088 T22: 0.0615 REMARK 3 T33: -0.1126 T12: 0.0524 REMARK 3 T13: -0.3010 T23: -0.1657 REMARK 3 L TENSOR REMARK 3 L11: 3.4294 L22: 5.1436 REMARK 3 L33: 4.9134 L12: 2.1902 REMARK 3 L13: 1.6270 L23: 2.1342 REMARK 3 S TENSOR REMARK 3 S11: 0.2421 S12: -0.1349 S13: -0.7161 REMARK 3 S21: 1.2868 S22: 0.3177 S23: -1.0520 REMARK 3 S31: 0.8583 S32: 0.4530 S33: -0.5598 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3C07 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JAN-08. REMARK 100 THE RCSB ID CODE IS RCSB046176. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-AUG-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17068 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 18.100 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 54.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 16.00 REMARK 200 R MERGE FOR SHELL (I) : 0.86700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, RESOLVE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.5 AMMONIUM SULFATE, 0.1M TRIS-HCL, REMARK 280 PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.03750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 37.47350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 37.47350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 156.05625 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 37.47350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 37.47350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.01875 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 37.47350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 37.47350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 156.05625 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 37.47350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 37.47350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 52.01875 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 104.03750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3200 ANGSTROM**2 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 ARG A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 PRO A 2 REMARK 465 ALA A 3 REMARK 465 THR A 4 REMARK 465 ASN A 5 REMARK 465 ASP A 6 REMARK 465 GLY A 7 REMARK 465 PRO A 8 REMARK 465 ASP A 9 REMARK 465 ASP A 10 REMARK 465 GLY A 11 REMARK 465 ALA A 12 REMARK 465 HIS A 13 REMARK 465 LEU A 14 REMARK 465 MSE A 236 REMARK 465 PRO A 237 REMARK 465 ASP A 238 REMARK 465 PRO A 239 REMARK 465 ALA A 240 REMARK 465 LYS A 241 REMARK 465 LYS A 242 REMARK 465 PRO A 243 REMARK 465 THR A 244 REMARK 465 ARG A 245 REMARK 465 ASP A 246 REMARK 465 ALA A 247 REMARK 465 GLY A 248 REMARK 465 PRO A 249 REMARK 465 GLN A 250 REMARK 465 ALA A 251 REMARK 465 MSE B -21 REMARK 465 GLY B -20 REMARK 465 SER B -19 REMARK 465 SER B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 SER B -11 REMARK 465 SER B -10 REMARK 465 GLY B -9 REMARK 465 ARG B -8 REMARK 465 GLU B -7 REMARK 465 ASN B -6 REMARK 465 LEU B -5 REMARK 465 TYR B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 PRO B 2 REMARK 465 ALA B 3 REMARK 465 THR B 4 REMARK 465 ASN B 5 REMARK 465 ASP B 6 REMARK 465 GLY B 7 REMARK 465 PRO B 8 REMARK 465 ASP B 9 REMARK 465 ASP B 10 REMARK 465 GLY B 11 REMARK 465 ALA B 12 REMARK 465 HIS B 13 REMARK 465 LEU B 14 REMARK 465 SER B 15 REMARK 465 PRO B 230 REMARK 465 GLY B 231 REMARK 465 MSE B 232 REMARK 465 THR B 233 REMARK 465 LYS B 234 REMARK 465 VAL B 235 REMARK 465 MSE B 236 REMARK 465 PRO B 237 REMARK 465 ASP B 238 REMARK 465 PRO B 239 REMARK 465 ALA B 240 REMARK 465 LYS B 241 REMARK 465 LYS B 242 REMARK 465 PRO B 243 REMARK 465 THR B 244 REMARK 465 ARG B 245 REMARK 465 ASP B 246 REMARK 465 ALA B 247 REMARK 465 GLY B 248 REMARK 465 PRO B 249 REMARK 465 GLN B 250 REMARK 465 ALA B 251 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 186 -83.04 -47.79 REMARK 500 ALA A 209 -0.38 -58.93 REMARK 500 ARG B 39 32.74 -85.57 REMARK 500 ALA B 61 72.15 -69.10 REMARK 500 ASP B 72 -53.63 -29.19 REMARK 500 SER B 132 158.78 -40.62 REMARK 500 ALA B 151 -23.81 -38.64 REMARK 500 PRO B 166 -64.45 -28.44 REMARK 500 GLU B 189 -53.92 -28.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ARG A 39 23.2 L L OUTSIDE RANGE REMARK 500 ILE A 164 24.2 L L OUTSIDE RANGE REMARK 500 PHE B 32 24.5 L L OUTSIDE RANGE REMARK 500 ARG B 35 23.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 252 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 252 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC6322 RELATED DB: TARGETDB DBREF 3C07 A 1 251 UNP Q9KZ96 Q9KZ96_STRCO 1 251 DBREF 3C07 B 1 251 UNP Q9KZ96 Q9KZ96_STRCO 1 251 SEQADV 3C07 MSE A -21 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLY A -20 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER A -19 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER A -18 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS A -17 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS A -16 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS A -15 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS A -14 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS A -13 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS A -12 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER A -11 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER A -10 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLY A -9 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 ARG A -8 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLU A -7 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 ASN A -6 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 LEU A -5 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 TYR A -4 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 PHE A -3 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLN A -2 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLY A -1 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS A 0 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 MSE B -21 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLY B -20 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER B -19 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER B -18 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS B -17 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS B -16 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS B -15 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS B -14 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS B -13 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS B -12 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER B -11 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 SER B -10 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLY B -9 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 ARG B -8 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLU B -7 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 ASN B -6 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 LEU B -5 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 TYR B -4 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 PHE B -3 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLN B -2 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 GLY B -1 UNP Q9KZ96 EXPRESSION TAG SEQADV 3C07 HIS B 0 UNP Q9KZ96 EXPRESSION TAG SEQRES 1 A 273 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 273 ARG GLU ASN LEU TYR PHE GLN GLY HIS MSE PRO ALA THR SEQRES 3 A 273 ASN ASP GLY PRO ASP ASP GLY ALA HIS LEU SER LYS SER SEQRES 4 A 273 GLU GLN THR ARG ALA LEU ILE LEU GLU THR ALA MSE ARG SEQRES 5 A 273 LEU PHE GLN GLU ARG GLY TYR ASP ARG THR THR MSE ARG SEQRES 6 A 273 ALA ILE ALA GLN GLU ALA GLY VAL SER VAL GLY ASN ALA SEQRES 7 A 273 TYR TYR TYR PHE ALA GLY LYS GLU HIS LEU ILE GLN GLY SEQRES 8 A 273 PHE TYR ASP ARG ILE ALA ALA GLU HIS ARG ALA ALA VAL SEQRES 9 A 273 ARG GLU VAL LEU ALA ARG GLU THR ASP LEU GLU ALA ARG SEQRES 10 A 273 LEU ALA GLY VAL LEU LYS VAL TRP LEU ASP ILE ALA THR SEQRES 11 A 273 PRO TYR HIS GLU PHE ALA VAL GLN PHE PHE LYS ASN ALA SEQRES 12 A 273 ALA ASP PRO ASP SER PRO LEU SER PRO PHE SER PRO GLU SEQRES 13 A 273 SER GLU HIS ALA ARG VAL GLU ALA ILE GLY ILE HIS ARG SEQRES 14 A 273 ALA VAL LEU ALA GLY ALA LYS THR LYS VAL PRO GLU GLU SEQRES 15 A 273 LEU ARG ASP ILE LEU PRO GLU LEU MSE TRP LEU SER GLN SEQRES 16 A 273 MSE GLY LEU VAL LEU TYR TRP ILE PHE ASP ARG THR GLU SEQRES 17 A 273 GLY ARG GLU ARG SER TYR ARG LEU ALA GLU ARG GLY ALA SEQRES 18 A 273 ARG LEU THR ALA ARG GLY VAL VAL LEU ALA ARG PHE ARG SEQRES 19 A 273 VAL LEU ARG PRO LEU VAL ARG GLU VAL HIS GLU LEU PHE SEQRES 20 A 273 THR ASP PHE LEU PRO GLY MSE THR LYS VAL MSE PRO ASP SEQRES 21 A 273 PRO ALA LYS LYS PRO THR ARG ASP ALA GLY PRO GLN ALA SEQRES 1 B 273 MSE GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 273 ARG GLU ASN LEU TYR PHE GLN GLY HIS MSE PRO ALA THR SEQRES 3 B 273 ASN ASP GLY PRO ASP ASP GLY ALA HIS LEU SER LYS SER SEQRES 4 B 273 GLU GLN THR ARG ALA LEU ILE LEU GLU THR ALA MSE ARG SEQRES 5 B 273 LEU PHE GLN GLU ARG GLY TYR ASP ARG THR THR MSE ARG SEQRES 6 B 273 ALA ILE ALA GLN GLU ALA GLY VAL SER VAL GLY ASN ALA SEQRES 7 B 273 TYR TYR TYR PHE ALA GLY LYS GLU HIS LEU ILE GLN GLY SEQRES 8 B 273 PHE TYR ASP ARG ILE ALA ALA GLU HIS ARG ALA ALA VAL SEQRES 9 B 273 ARG GLU VAL LEU ALA ARG GLU THR ASP LEU GLU ALA ARG SEQRES 10 B 273 LEU ALA GLY VAL LEU LYS VAL TRP LEU ASP ILE ALA THR SEQRES 11 B 273 PRO TYR HIS GLU PHE ALA VAL GLN PHE PHE LYS ASN ALA SEQRES 12 B 273 ALA ASP PRO ASP SER PRO LEU SER PRO PHE SER PRO GLU SEQRES 13 B 273 SER GLU HIS ALA ARG VAL GLU ALA ILE GLY ILE HIS ARG SEQRES 14 B 273 ALA VAL LEU ALA GLY ALA LYS THR LYS VAL PRO GLU GLU SEQRES 15 B 273 LEU ARG ASP ILE LEU PRO GLU LEU MSE TRP LEU SER GLN SEQRES 16 B 273 MSE GLY LEU VAL LEU TYR TRP ILE PHE ASP ARG THR GLU SEQRES 17 B 273 GLY ARG GLU ARG SER TYR ARG LEU ALA GLU ARG GLY ALA SEQRES 18 B 273 ARG LEU THR ALA ARG GLY VAL VAL LEU ALA ARG PHE ARG SEQRES 19 B 273 VAL LEU ARG PRO LEU VAL ARG GLU VAL HIS GLU LEU PHE SEQRES 20 B 273 THR ASP PHE LEU PRO GLY MSE THR LYS VAL MSE PRO ASP SEQRES 21 B 273 PRO ALA LYS LYS PRO THR ARG ASP ALA GLY PRO GLN ALA MODRES 3C07 MSE A 29 MET SELENOMETHIONINE MODRES 3C07 MSE A 42 MET SELENOMETHIONINE MODRES 3C07 MSE A 169 MET SELENOMETHIONINE MODRES 3C07 MSE A 174 MET SELENOMETHIONINE MODRES 3C07 MSE A 232 MET SELENOMETHIONINE MODRES 3C07 MSE B 29 MET SELENOMETHIONINE MODRES 3C07 MSE B 42 MET SELENOMETHIONINE MODRES 3C07 MSE B 169 MET SELENOMETHIONINE MODRES 3C07 MSE B 174 MET SELENOMETHIONINE HET MSE A 29 8 HET MSE A 42 8 HET MSE A 169 8 HET MSE A 174 8 HET MSE A 232 8 HET MSE B 29 8 HET MSE B 42 8 HET MSE B 169 8 HET MSE B 174 8 HET SO4 A 252 5 HET SO4 A 253 5 HET SO4 B 252 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 3 SO4 3(O4 S 2-) HELIX 1 1 SER A 15 ARG A 35 1 21 HELIX 2 2 THR A 41 GLY A 50 1 10 HELIX 3 3 SER A 52 PHE A 60 1 9 HELIX 4 4 GLY A 62 VAL A 82 1 21 HELIX 5 5 GLU A 84 GLU A 89 1 6 HELIX 6 6 ASP A 91 THR A 108 1 18 HELIX 7 7 TYR A 110 ALA A 122 1 13 HELIX 8 8 SER A 132 GLU A 134 5 3 HELIX 9 9 SER A 135 GLY A 152 1 18 HELIX 10 10 PRO A 158 ARG A 162 5 5 HELIX 11 11 ASP A 163 ASP A 183 1 21 HELIX 12 12 ARG A 188 ALA A 209 1 22 HELIX 13 13 LEU A 214 LEU A 229 1 16 HELIX 14 14 LYS B 16 GLY B 36 1 21 HELIX 15 15 THR B 41 GLY B 50 1 10 HELIX 16 16 SER B 52 PHE B 60 1 9 HELIX 17 17 GLY B 62 ARG B 79 1 18 HELIX 18 18 VAL B 82 ARG B 88 1 7 HELIX 19 19 ASP B 91 THR B 108 1 18 HELIX 20 20 TYR B 110 ALA B 122 1 13 HELIX 21 21 SER B 135 GLY B 152 1 18 HELIX 22 22 PRO B 158 ASP B 163 1 6 HELIX 23 23 ILE B 164 ASP B 183 1 20 HELIX 24 24 THR B 185 GLY B 187 5 3 HELIX 25 25 ARG B 188 ARG B 210 1 23 HELIX 26 26 PHE B 211 VAL B 213 5 3 HELIX 27 27 LEU B 214 PHE B 228 1 15 LINK C ALA A 28 N MSE A 29 1555 1555 1.33 LINK C MSE A 29 N ARG A 30 1555 1555 1.33 LINK C THR A 41 N MSE A 42 1555 1555 1.33 LINK C MSE A 42 N ARG A 43 1555 1555 1.32 LINK C LEU A 168 N MSE A 169 1555 1555 1.33 LINK C MSE A 169 N TRP A 170 1555 1555 1.34 LINK C GLN A 173 N MSE A 174 1555 1555 1.33 LINK C MSE A 174 N GLY A 175 1555 1555 1.33 LINK C GLY A 231 N MSE A 232 1555 1555 1.34 LINK C MSE A 232 N THR A 233 1555 1555 1.34 LINK C ALA B 28 N MSE B 29 1555 1555 1.34 LINK C MSE B 29 N ARG B 30 1555 1555 1.34 LINK C THR B 41 N MSE B 42 1555 1555 1.32 LINK C MSE B 42 N ARG B 43 1555 1555 1.32 LINK C LEU B 168 N MSE B 169 1555 1555 1.32 LINK C MSE B 169 N TRP B 170 1555 1555 1.33 LINK C GLN B 173 N MSE B 174 1555 1555 1.34 LINK C MSE B 174 N GLY B 175 1555 1555 1.34 SITE 1 AC1 3 PRO A 158 GLU A 159 GLU A 160 SITE 1 AC2 4 SER A 15 LYS A 16 LYS B 156 ARG B 210 SITE 1 AC3 5 ASP A 227 ARG B 43 ARG B 190 ARG B 193 SITE 2 AC3 5 ARG B 197 CRYST1 74.947 74.947 208.075 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013343 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004806 0.00000