data_3C0F # _entry.id 3C0F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3C0F RCSB RCSB046184 WWPDB D_1000046184 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3C0F _pdbx_database_status.recvd_initial_deposition_date 2008-01-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, Y.' 1 'Bahti, P.' 2 'Shaw, N.' 3 'Song, G.' 4 'Yin, J.' 5 'Zhu, J.-Y.' 6 'Zhang, H.' 7 'Xu, H.' 8 'Wang, B.-C.' 9 'Liu, Z.-J.' 10 # _citation.id primary _citation.title 'Crystal structure of a novel non-Pfam protein AF1514 from Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray source.' _citation.journal_abbrev Proteins _citation.journal_volume 71 _citation.page_first 2109 _citation.page_last 2113 _citation.year 2008 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18361456 _citation.pdbx_database_id_DOI 10.1002/prot.22025 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Li, Y.' 1 primary 'Bahti, P.' 2 primary 'Shaw, N.' 3 primary 'Song, G.' 4 primary 'Chen, S.' 5 primary 'Zhang, X.' 6 primary 'Zhang, M.' 7 primary 'Cheng, C.' 8 primary 'Yin, J.' 9 primary 'Zhu, J.Y.' 10 primary 'Zhang, H.' 11 primary 'Che, D.' 12 primary 'Xu, H.' 13 primary 'Abbas, A.' 14 primary 'Wang, B.C.' 15 primary 'Liu, Z.J.' 16 # _cell.entry_id 3C0F _cell.length_a 49.737 _cell.length_b 49.737 _cell.length_c 106.462 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3C0F _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein AF_1514' 10654.134 1 ? ? ? ? 2 water nat water 18.015 121 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MEIMDEI(MLY)VNLQKEVSLEEAERYA(MLY)NIAS(MLY)YGDGILLSVHDS(MLY)TGYRAPEVYCCGEKPWEVYAC NRGANL(MLY)ISVNQFEFYFRIEVEGQAKY ; _entity_poly.pdbx_seq_one_letter_code_can ;MEIMDEIKVNLQKEVSLEEAERYAKNIASKYGDGILLSVHDSKTGYRAPEVYCCGEKPWEVYACNRGANLKISVNQFEFY FRIEVEGQAKY ; _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLU n 1 3 ILE n 1 4 MET n 1 5 ASP n 1 6 GLU n 1 7 ILE n 1 8 MLY n 1 9 VAL n 1 10 ASN n 1 11 LEU n 1 12 GLN n 1 13 LYS n 1 14 GLU n 1 15 VAL n 1 16 SER n 1 17 LEU n 1 18 GLU n 1 19 GLU n 1 20 ALA n 1 21 GLU n 1 22 ARG n 1 23 TYR n 1 24 ALA n 1 25 MLY n 1 26 ASN n 1 27 ILE n 1 28 ALA n 1 29 SER n 1 30 MLY n 1 31 TYR n 1 32 GLY n 1 33 ASP n 1 34 GLY n 1 35 ILE n 1 36 LEU n 1 37 LEU n 1 38 SER n 1 39 VAL n 1 40 HIS n 1 41 ASP n 1 42 SER n 1 43 MLY n 1 44 THR n 1 45 GLY n 1 46 TYR n 1 47 ARG n 1 48 ALA n 1 49 PRO n 1 50 GLU n 1 51 VAL n 1 52 TYR n 1 53 CYS n 1 54 CYS n 1 55 GLY n 1 56 GLU n 1 57 LYS n 1 58 PRO n 1 59 TRP n 1 60 GLU n 1 61 VAL n 1 62 TYR n 1 63 ALA n 1 64 CYS n 1 65 ASN n 1 66 ARG n 1 67 GLY n 1 68 ALA n 1 69 ASN n 1 70 LEU n 1 71 MLY n 1 72 ILE n 1 73 SER n 1 74 VAL n 1 75 ASN n 1 76 GLN n 1 77 PHE n 1 78 GLU n 1 79 PHE n 1 80 TYR n 1 81 PHE n 1 82 ARG n 1 83 ILE n 1 84 GLU n 1 85 VAL n 1 86 GLU n 1 87 GLY n 1 88 GLN n 1 89 ALA n 1 90 LYS n 1 91 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Archaeoglobus _entity_src_gen.pdbx_gene_src_gene AF1514 _entity_src_gen.gene_src_species 'Archaeoglobus fulgidus' _entity_src_gen.gene_src_strain DSM4304 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Archaeoglobus fulgidus DSM 4304' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224325 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y1514_ARCFU _struct_ref.pdbx_db_accession O28758 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEIMDEIKVNLQKEVSLEEAERYAKNIASKYGDGILLSVHDSKTGYRAPEVYCCGEKPWEVYACNRGANLKISVNQFEFY FRIEVEGQAKY ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3C0F _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 91 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O28758 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 91 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 91 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3C0F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 2 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.09 _exptl_crystal.density_percent_sol 60.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details '0.1 M sodium chloride, 0.1 M sodium acetate trihydrate, 10 % v/v MPD, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.pdbx_collection_date _diffrn_detector.details 1 'IMAGE PLATE' 'RIGAKU RAXIS IV++' 2007-11-12 ? 2 'IMAGE PLATE' 'RIGAKU RAXIS IV++' 2007-11-18 ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.5418 1.0 2 2.29 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.type _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_wavelength_list 1 'ROTATING ANODE' 'RIGAKU FR-E+ SUPERBRIGHT' ? ? 1.5418 ? 2 'ROTATING ANODE' 'RIGAKU MICROMAX-007' ? ? ? 2.29 # _reflns.entry_id 3C0F _reflns.observed_criterion_sigma_F 1.70 _reflns.observed_criterion_sigma_I 1.74 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 45.08 _reflns.number_all 13109 _reflns.number_obs 11982 _reflns.percent_possible_obs 91.4 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_Rsym_value 0.042 _reflns.pdbx_netI_over_sigmaI 46.2 _reflns.B_iso_Wilson_estimate 26 _reflns.pdbx_redundancy 9.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 58 _reflns_shell.Rmerge_I_obs 0.215 _reflns_shell.pdbx_Rsym_value 0.216 _reflns_shell.meanI_over_sigI_obs 4.80 _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 735 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3C0F _refine.ls_number_reflns_obs 11347 _refine.ls_number_reflns_all 13109 _refine.pdbx_ls_sigma_I 1.80 _refine.pdbx_ls_sigma_F 1.80 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.08 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 91.27 _refine.ls_R_factor_obs 0.20652 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20554 _refine.ls_R_factor_R_free 0.22647 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 575 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.B_iso_mean 19.372 _refine.aniso_B[1][1] 0.65 _refine.aniso_B[2][2] 0.65 _refine.aniso_B[3][3] -1.31 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.122 _refine.pdbx_overall_ESU_R_Free 0.114 _refine.overall_SU_ML 0.071 _refine.overall_SU_B 4.362 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3C0F _refine_analyze.Luzzati_coordinate_error_obs 0.035 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 682 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 803 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 45.08 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 699 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.009 1.995 ? 942 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.217 5.000 ? 84 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 25.942 25.000 ? 34 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 10.344 15.000 ? 101 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.080 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.058 0.200 ? 102 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 528 'X-RAY DIFFRACTION' ? r_nbd_refined 0.171 0.200 ? 290 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.307 0.200 ? 466 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.064 0.200 ? 46 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.158 0.203 ? 34 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.073 0.200 ? 9 'X-RAY DIFFRACTION' ? r_mcbond_it 0.280 1.500 ? 434 'X-RAY DIFFRACTION' ? r_mcangle_it 0.490 2.000 ? 669 'X-RAY DIFFRACTION' ? r_scbond_it 0.698 3.000 ? 308 'X-RAY DIFFRACTION' ? r_scangle_it 1.058 4.500 ? 273 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.846 _refine_ls_shell.number_reflns_R_work 484 _refine_ls_shell.R_factor_R_work 0.409 _refine_ls_shell.percent_reflns_obs 53.95 _refine_ls_shell.R_factor_R_free 0.412 _refine_ls_shell.R_factor_R_free_error 0.114 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 21 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 420 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3C0F _struct.title 'Crystal Structure of a novel non-Pfam protein AF1514 from Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray source' _struct.pdbx_descriptor 'Uncharacterized protein AF_1514' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3C0F _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.text 'hot dog fold, sulphur SAD, methylated, UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 16 ? SER A 29 ? SER B 16 SER B 29 1 ? 14 HELX_P HELX_P2 2 LYS A 57 ? ARG A 66 ? LYS B 57 ARG B 66 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ILE 7 C ? ? ? 1_555 A MLY 8 N ? ? B ILE 7 B MLY 8 1_555 ? ? ? ? ? ? ? 1.329 ? covale2 covale ? ? A MLY 8 C ? ? ? 1_555 A VAL 9 N ? ? B MLY 8 B VAL 9 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A ALA 24 C ? ? ? 1_555 A MLY 25 N ? ? B ALA 24 B MLY 25 1_555 ? ? ? ? ? ? ? 1.335 ? covale4 covale ? ? A MLY 25 C ? ? ? 1_555 A ASN 26 N ? ? B MLY 25 B ASN 26 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale ? ? A SER 29 C ? ? ? 1_555 A MLY 30 N ? ? B SER 29 B MLY 30 1_555 ? ? ? ? ? ? ? 1.333 ? covale6 covale ? ? A MLY 30 C ? ? ? 1_555 A TYR 31 N ? ? B MLY 30 B TYR 31 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale ? ? A SER 42 C ? ? ? 1_555 A MLY 43 N ? ? B SER 42 B MLY 43 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A MLY 43 C ? ? ? 1_555 A THR 44 N ? ? B MLY 43 B THR 44 1_555 ? ? ? ? ? ? ? 1.333 ? covale9 covale ? ? A LEU 70 C ? ? ? 1_555 A MLY 71 N ? ? B LEU 70 B MLY 71 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A MLY 71 C ? ? ? 1_555 A ILE 72 N ? ? B MLY 71 B ILE 72 1_555 ? ? ? ? ? ? ? 1.331 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 48 A . ? ALA 48 B PRO 49 A ? PRO 49 B 1 2.09 2 CYS 54 A . ? CYS 54 B GLY 55 A ? GLY 55 B 1 -7.77 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 5 ? VAL A 9 ? ASP B 5 VAL B 9 A 2 LEU A 70 ? VAL A 74 ? LEU B 70 VAL B 74 A 3 PHE A 77 ? GLU A 84 ? PHE B 77 GLU B 84 A 4 ASP A 33 ? ASP A 41 ? ASP B 33 ASP B 41 A 5 ARG A 47 ? ALA A 48 ? ARG B 47 ALA B 48 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 9 ? N VAL B 9 O SER A 73 ? O SER B 73 A 2 3 N LEU A 70 ? N LEU B 70 O PHE A 81 ? O PHE B 81 A 3 4 O GLU A 84 ? O GLU B 84 N ASP A 33 ? N ASP B 33 A 4 5 N VAL A 39 ? N VAL B 39 O ALA A 48 ? O ALA B 48 # _database_PDB_matrix.entry_id 3C0F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3C0F _atom_sites.fract_transf_matrix[1][1] 0.020106 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020106 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009393 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? B . n A 1 2 GLU 2 2 ? ? ? B . n A 1 3 ILE 3 3 3 ILE ALA B . n A 1 4 MET 4 4 4 MET MET B . n A 1 5 ASP 5 5 5 ASP ASP B . n A 1 6 GLU 6 6 6 GLU GLU B . n A 1 7 ILE 7 7 7 ILE ILE B . n A 1 8 MLY 8 8 8 MLY MLY B . n A 1 9 VAL 9 9 9 VAL VAL B . n A 1 10 ASN 10 10 10 ASN ASN B . n A 1 11 LEU 11 11 11 LEU LEU B . n A 1 12 GLN 12 12 12 GLN GLN B . n A 1 13 LYS 13 13 13 LYS LYS B . n A 1 14 GLU 14 14 14 GLU GLU B . n A 1 15 VAL 15 15 15 VAL VAL B . n A 1 16 SER 16 16 16 SER SER B . n A 1 17 LEU 17 17 17 LEU LEU B . n A 1 18 GLU 18 18 18 GLU GLU B . n A 1 19 GLU 19 19 19 GLU GLU B . n A 1 20 ALA 20 20 20 ALA ALA B . n A 1 21 GLU 21 21 21 GLU GLU B . n A 1 22 ARG 22 22 22 ARG ARG B . n A 1 23 TYR 23 23 23 TYR TYR B . n A 1 24 ALA 24 24 24 ALA ALA B . n A 1 25 MLY 25 25 25 MLY MLY B . n A 1 26 ASN 26 26 26 ASN ASN B . n A 1 27 ILE 27 27 27 ILE ILE B . n A 1 28 ALA 28 28 28 ALA ALA B . n A 1 29 SER 29 29 29 SER SER B . n A 1 30 MLY 30 30 30 MLY MLY B . n A 1 31 TYR 31 31 31 TYR TYR B . n A 1 32 GLY 32 32 32 GLY GLY B . n A 1 33 ASP 33 33 33 ASP ASP B . n A 1 34 GLY 34 34 34 GLY GLY B . n A 1 35 ILE 35 35 35 ILE ILE B . n A 1 36 LEU 36 36 36 LEU LEU B . n A 1 37 LEU 37 37 37 LEU LEU B . n A 1 38 SER 38 38 38 SER SER B . n A 1 39 VAL 39 39 39 VAL VAL B . n A 1 40 HIS 40 40 40 HIS HIS B . n A 1 41 ASP 41 41 41 ASP ASP B . n A 1 42 SER 42 42 42 SER SER B . n A 1 43 MLY 43 43 43 MLY MLY B . n A 1 44 THR 44 44 44 THR THR B . n A 1 45 GLY 45 45 45 GLY GLY B . n A 1 46 TYR 46 46 46 TYR TYR B . n A 1 47 ARG 47 47 47 ARG ARG B . n A 1 48 ALA 48 48 48 ALA ALA B . n A 1 49 PRO 49 49 49 PRO PRO B . n A 1 50 GLU 50 50 50 GLU GLU B . n A 1 51 VAL 51 51 51 VAL VAL B . n A 1 52 TYR 52 52 52 TYR TYR B . n A 1 53 CYS 53 53 53 CYS GLY B . n A 1 54 CYS 54 54 54 CYS CYS B . n A 1 55 GLY 55 55 55 GLY GLY B . n A 1 56 GLU 56 56 56 GLU GLY B . n A 1 57 LYS 57 57 57 LYS LYS B . n A 1 58 PRO 58 58 58 PRO PRO B . n A 1 59 TRP 59 59 59 TRP TRP B . n A 1 60 GLU 60 60 60 GLU GLU B . n A 1 61 VAL 61 61 61 VAL VAL B . n A 1 62 TYR 62 62 62 TYR TYR B . n A 1 63 ALA 63 63 63 ALA ALA B . n A 1 64 CYS 64 64 64 CYS CYS B . n A 1 65 ASN 65 65 65 ASN ASN B . n A 1 66 ARG 66 66 66 ARG ARG B . n A 1 67 GLY 67 67 67 GLY GLY B . n A 1 68 ALA 68 68 68 ALA ALA B . n A 1 69 ASN 69 69 69 ASN ASN B . n A 1 70 LEU 70 70 70 LEU LEU B . n A 1 71 MLY 71 71 71 MLY MLY B . n A 1 72 ILE 72 72 72 ILE ILE B . n A 1 73 SER 73 73 73 SER SER B . n A 1 74 VAL 74 74 74 VAL VAL B . n A 1 75 ASN 75 75 75 ASN ASN B . n A 1 76 GLN 76 76 76 GLN GLN B . n A 1 77 PHE 77 77 77 PHE PHE B . n A 1 78 GLU 78 78 78 GLU GLU B . n A 1 79 PHE 79 79 79 PHE PHE B . n A 1 80 TYR 80 80 80 TYR TYR B . n A 1 81 PHE 81 81 81 PHE PHE B . n A 1 82 ARG 82 82 82 ARG ARG B . n A 1 83 ILE 83 83 83 ILE ILE B . n A 1 84 GLU 84 84 84 GLU GLU B . n A 1 85 VAL 85 85 85 VAL VAL B . n A 1 86 GLU 86 86 86 GLU GLU B . n A 1 87 GLY 87 87 87 GLY ALA B . n A 1 88 GLN 88 88 ? ? ? B . n A 1 89 ALA 89 89 ? ? ? B . n A 1 90 LYS 90 90 ? ? ? B . n A 1 91 TYR 91 91 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 92 1 HOH HOH B . B 2 HOH 2 93 2 HOH HOH B . B 2 HOH 3 94 3 HOH HOH B . B 2 HOH 4 95 4 HOH HOH B . B 2 HOH 5 96 5 HOH HOH B . B 2 HOH 6 97 6 HOH HOH B . B 2 HOH 7 98 7 HOH HOH B . B 2 HOH 8 99 8 HOH HOH B . B 2 HOH 9 100 9 HOH HOH B . B 2 HOH 10 101 10 HOH HOH B . B 2 HOH 11 102 11 HOH HOH B . B 2 HOH 12 103 12 HOH HOH B . B 2 HOH 13 104 14 HOH HOH B . B 2 HOH 14 105 15 HOH HOH B . B 2 HOH 15 106 16 HOH HOH B . B 2 HOH 16 107 17 HOH HOH B . B 2 HOH 17 108 18 HOH HOH B . B 2 HOH 18 109 19 HOH HOH B . B 2 HOH 19 110 20 HOH HOH B . B 2 HOH 20 111 21 HOH HOH B . B 2 HOH 21 112 22 HOH HOH B . B 2 HOH 22 113 23 HOH HOH B . B 2 HOH 23 114 24 HOH HOH B . B 2 HOH 24 115 25 HOH HOH B . B 2 HOH 25 116 26 HOH HOH B . B 2 HOH 26 117 27 HOH HOH B . B 2 HOH 27 118 28 HOH HOH B . B 2 HOH 28 119 29 HOH HOH B . B 2 HOH 29 120 30 HOH HOH B . B 2 HOH 30 121 31 HOH HOH B . B 2 HOH 31 122 32 HOH HOH B . B 2 HOH 32 123 33 HOH HOH B . B 2 HOH 33 124 34 HOH HOH B . B 2 HOH 34 125 35 HOH HOH B . B 2 HOH 35 126 36 HOH HOH B . B 2 HOH 36 127 37 HOH HOH B . B 2 HOH 37 128 38 HOH HOH B . B 2 HOH 38 129 39 HOH HOH B . B 2 HOH 39 130 40 HOH HOH B . B 2 HOH 40 131 41 HOH HOH B . B 2 HOH 41 132 42 HOH HOH B . B 2 HOH 42 133 43 HOH HOH B . B 2 HOH 43 134 44 HOH HOH B . B 2 HOH 44 135 45 HOH HOH B . B 2 HOH 45 136 46 HOH HOH B . B 2 HOH 46 137 47 HOH HOH B . B 2 HOH 47 138 48 HOH HOH B . B 2 HOH 48 139 49 HOH HOH B . B 2 HOH 49 140 50 HOH HOH B . B 2 HOH 50 141 51 HOH HOH B . B 2 HOH 51 142 52 HOH HOH B . B 2 HOH 52 143 53 HOH HOH B . B 2 HOH 53 144 54 HOH HOH B . B 2 HOH 54 145 55 HOH HOH B . B 2 HOH 55 146 56 HOH HOH B . B 2 HOH 56 147 62 HOH HOH B . B 2 HOH 57 148 63 HOH HOH B . B 2 HOH 58 149 64 HOH HOH B . B 2 HOH 59 150 66 HOH HOH B . B 2 HOH 60 151 68 HOH HOH B . B 2 HOH 61 152 71 HOH HOH B . B 2 HOH 62 153 72 HOH HOH B . B 2 HOH 63 154 73 HOH HOH B . B 2 HOH 64 155 76 HOH HOH B . B 2 HOH 65 156 77 HOH HOH B . B 2 HOH 66 157 78 HOH HOH B . B 2 HOH 67 158 79 HOH HOH B . B 2 HOH 68 159 80 HOH HOH B . B 2 HOH 69 160 83 HOH HOH B . B 2 HOH 70 161 87 HOH HOH B . B 2 HOH 71 162 90 HOH HOH B . B 2 HOH 72 163 93 HOH HOH B . B 2 HOH 73 164 94 HOH HOH B . B 2 HOH 74 165 96 HOH HOH B . B 2 HOH 75 166 97 HOH HOH B . B 2 HOH 76 167 98 HOH HOH B . B 2 HOH 77 168 99 HOH HOH B . B 2 HOH 78 169 101 HOH HOH B . B 2 HOH 79 170 102 HOH HOH B . B 2 HOH 80 171 103 HOH HOH B . B 2 HOH 81 172 104 HOH HOH B . B 2 HOH 82 173 107 HOH HOH B . B 2 HOH 83 174 110 HOH HOH B . B 2 HOH 84 175 111 HOH HOH B . B 2 HOH 85 176 112 HOH HOH B . B 2 HOH 86 177 113 HOH HOH B . B 2 HOH 87 178 115 HOH HOH B . B 2 HOH 88 179 116 HOH HOH B . B 2 HOH 89 180 117 HOH HOH B . B 2 HOH 90 181 118 HOH HOH B . B 2 HOH 91 182 120 HOH HOH B . B 2 HOH 92 183 121 HOH HOH B . B 2 HOH 93 184 123 HOH HOH B . B 2 HOH 94 185 125 HOH HOH B . B 2 HOH 95 186 126 HOH HOH B . B 2 HOH 96 187 127 HOH HOH B . B 2 HOH 97 188 128 HOH HOH B . B 2 HOH 98 189 129 HOH HOH B . B 2 HOH 99 190 130 HOH HOH B . B 2 HOH 100 191 133 HOH HOH B . B 2 HOH 101 192 134 HOH HOH B . B 2 HOH 102 193 136 HOH HOH B . B 2 HOH 103 194 138 HOH HOH B . B 2 HOH 104 195 139 HOH HOH B . B 2 HOH 105 196 140 HOH HOH B . B 2 HOH 106 197 141 HOH HOH B . B 2 HOH 107 198 143 HOH HOH B . B 2 HOH 108 199 145 HOH HOH B . B 2 HOH 109 200 146 HOH HOH B . B 2 HOH 110 201 147 HOH HOH B . B 2 HOH 111 202 148 HOH HOH B . B 2 HOH 112 203 149 HOH HOH B . B 2 HOH 113 204 151 HOH HOH B . B 2 HOH 114 205 152 HOH HOH B . B 2 HOH 115 206 153 HOH HOH B . B 2 HOH 116 207 154 HOH HOH B . B 2 HOH 117 208 156 HOH HOH B . B 2 HOH 118 209 158 HOH HOH B . B 2 HOH 119 210 159 HOH HOH B . B 2 HOH 120 211 163 HOH HOH B . B 2 HOH 121 212 167 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MLY 8 B MLY 8 ? LYS N-DIMETHYL-LYSINE 2 A MLY 25 B MLY 25 ? LYS N-DIMETHYL-LYSINE 3 A MLY 30 B MLY 30 ? LYS N-DIMETHYL-LYSINE 4 A MLY 43 B MLY 43 ? LYS N-DIMETHYL-LYSINE 5 A MLY 71 B MLY 71 ? LYS N-DIMETHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 1390 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 24.8920 21.6870 -2.2670 0.0107 0.1060 -0.0112 -0.0372 0.0285 -0.0414 14.7769 10.4615 12.9779 -10.2464 10.3172 -7.2985 -0.1040 0.0985 0.4025 0.0338 -0.1528 -0.3771 -0.2391 0.4482 0.2567 'X-RAY DIFFRACTION' 2 ? refined 30.2630 9.3380 -5.3750 0.0199 0.0715 -0.0337 0.0661 0.0248 0.0028 31.0341 4.3188 15.9937 0.1242 7.3803 -0.6319 -0.2957 -0.7735 -0.6525 0.3834 0.2974 -0.2320 0.6772 0.2039 -0.0017 'X-RAY DIFFRACTION' 3 ? refined 19.9980 11.7350 -5.5910 0.0182 0.0674 -0.0026 -0.0259 0.0102 0.0125 16.8098 6.1705 5.6402 -3.0384 -4.0965 1.4216 -0.0219 -0.3261 -0.5663 0.0824 -0.0706 0.0448 0.3397 0.2773 0.0925 'X-RAY DIFFRACTION' 4 ? refined 25.5760 16.6170 -13.4840 0.0431 0.0833 0.0144 -0.0111 -0.0048 -0.0023 4.4905 0.8888 1.6146 -0.4854 -1.4263 0.6817 0.0602 -0.1288 -0.0752 -0.0213 -0.0482 -0.0574 -0.0711 0.0734 -0.0120 'X-RAY DIFFRACTION' 5 ? refined 32.9180 23.3370 -22.9590 0.1630 0.1428 0.0653 -0.0079 0.0636 -0.0113 16.1165 24.8154 10.8073 -6.2572 -5.5389 15.4812 0.3746 1.0946 0.9414 -1.3759 0.6344 -1.3512 -1.3547 0.8988 -1.0090 'X-RAY DIFFRACTION' 6 ? refined 25.6050 23.8240 -19.4720 0.0648 -0.0050 -0.0433 0.0022 0.0251 0.0033 19.9059 4.4325 6.2264 -0.0989 -0.0582 -3.0433 0.0074 -0.0291 0.5235 -0.0846 0.0577 -0.2469 -0.5501 -0.1468 -0.0651 'X-RAY DIFFRACTION' 7 ? refined 20.4490 22.4380 -12.7630 0.0258 0.0576 0.0113 -0.0296 0.0198 -0.0016 5.2969 2.9780 5.9229 -2.5477 3.0636 -1.4957 -0.2013 0.2498 0.1598 -0.0908 0.0328 -0.1305 -0.4027 0.1269 0.1685 'X-RAY DIFFRACTION' 8 ? refined 19.1680 18.3440 -11.1870 0.0455 0.0718 0.0124 0.0076 0.0160 -0.0219 7.1326 1.2533 2.9705 0.2094 1.8546 0.0122 -0.1102 0.0545 -0.0232 -0.0423 0.0839 0.1123 -0.0842 -0.0566 0.0263 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 B 3 A 3 B 13 A 13 ? 'X-RAY DIFFRACTION' ? 2 2 B 14 A 14 B 20 A 20 ? 'X-RAY DIFFRACTION' ? 3 3 B 21 A 21 B 29 A 29 ? 'X-RAY DIFFRACTION' ? 4 4 B 30 A 30 B 50 A 50 ? 'X-RAY DIFFRACTION' ? 5 5 B 51 A 51 B 57 A 57 ? 'X-RAY DIFFRACTION' ? 6 6 B 58 A 58 B 64 A 64 ? 'X-RAY DIFFRACTION' ? 7 7 B 65 A 65 B 74 A 74 ? 'X-RAY DIFFRACTION' ? 8 8 B 75 A 75 B 87 A 87 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 SHARP phasing . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CH1 B MLY 71 ? ? O B HOH 179 ? ? 1.71 2 1 OE2 B GLU 6 ? ? O B HOH 148 ? ? 2.04 3 1 OD1 B ASN 10 ? ? O B HOH 210 ? ? 2.09 4 1 O B HOH 196 ? ? O B HOH 198 ? ? 2.09 5 1 O B HOH 166 ? ? O B HOH 190 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 201 ? ? 1_555 O B HOH 202 ? ? 8_664 1.19 2 1 O B HOH 133 ? ? 1_555 O B HOH 208 ? ? 7_555 2.01 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS B 54 ? ? -160.33 47.45 2 1 ASN B 75 ? ? 44.25 -118.39 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B ILE 3 ? CG1 ? A ILE 3 CG1 2 1 Y 1 B ILE 3 ? CG2 ? A ILE 3 CG2 3 1 Y 1 B ILE 3 ? CD1 ? A ILE 3 CD1 4 1 Y 1 B CYS 53 ? CB ? A CYS 53 CB 5 1 Y 1 B CYS 53 ? SG ? A CYS 53 SG 6 1 Y 1 B GLU 56 ? CB ? A GLU 56 CB 7 1 Y 1 B GLU 56 ? CG ? A GLU 56 CG 8 1 Y 1 B GLU 56 ? CD ? A GLU 56 CD 9 1 Y 1 B GLU 56 ? OE1 ? A GLU 56 OE1 10 1 Y 1 B GLU 56 ? OE2 ? A GLU 56 OE2 11 1 Y 1 B LYS 57 ? CE ? A LYS 57 CE 12 1 Y 1 B LYS 57 ? NZ ? A LYS 57 NZ 13 1 Y 1 B ARG 66 ? NH2 ? A ARG 66 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 1 ? A MET 1 2 1 Y 1 B GLU 2 ? A GLU 2 3 1 Y 1 B GLN 88 ? A GLN 88 4 1 Y 1 B ALA 89 ? A ALA 89 5 1 Y 1 B LYS 90 ? A LYS 90 6 1 Y 1 B TYR 91 ? A TYR 91 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #