HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-JAN-08 3C4N TITLE CRYSTAL STRUCTURE OF DR_0571 PROTEIN FROM DEINOCOCCUS RADIODURANS IN TITLE 2 COMPLEX WITH ADP. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TITLE 3 DRR125 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN DR_0571; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS R1; SOURCE 3 ORGANISM_TAXID: 243230; SOURCE 4 STRAIN: R1 / DSM 20539 / IFO 15346 / LMG 4051 / NCIB 9279; SOURCE 5 ATCC: 13939; SOURCE 6 GENE: DR_0571; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+MAGIC; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS ALPHA-BETA PROTEIN, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR F.FOROUHAR,Y.CHEN,J.SEETHARAMAN,L.MAO,R.XIAO,K.CUNNINGHAM,L.A.OWEN, AUTHOR 2 M.MAGLAQUI,M.C.BARAN,T.B.ACTON,G.T.MONTELIONE,J.F.HUNT,L.TONG, AUTHOR 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 3 25-OCT-17 3C4N 1 REMARK REVDAT 2 24-FEB-09 3C4N 1 VERSN REVDAT 1 26-FEB-08 3C4N 0 JRNL AUTH F.FOROUHAR,Y.CHEN,J.SEETHARAMAN,L.MAO,R.XIAO,K.CUNNINGHAM, JRNL AUTH 2 L.A.OWEN,M.MAGLAQUI,M.C.BARAN,T.B.ACTON,G.T.MONTELIONE, JRNL AUTH 3 J.F.HUNT,L.TONG JRNL TITL CRYSTAL STRUCTURE OF DR_0571 PROTEIN FROM DEINOCOCCUS JRNL TITL 2 RADIODURANS IN COMPLEX WITH ADP. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.98 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 497246.540 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 77.4 REMARK 3 NUMBER OF REFLECTIONS : 55556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.800 REMARK 3 FREE R VALUE TEST SET COUNT : 5450 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.49 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.80 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3889 REMARK 3 BIN R VALUE (WORKING SET) : 0.2270 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 389 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.014 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5248 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 372 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.85000 REMARK 3 B22 (A**2) : -1.17000 REMARK 3 B33 (A**2) : 2.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.42000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.28 REMARK 3 ESD FROM SIGMAA (A) : 0.16 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.27 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.980 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 26.78 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FRIEDEL PAIRS WERE USED IN PHASING REMARK 4 REMARK 4 3C4N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000046335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 65421 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 200 DATA REDUNDANCY : 1.600 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : 0.10500 REMARK 200 FOR THE DATA SET : 10.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.16300 REMARK 200 R SYM FOR SHELL (I) : 0.19100 REMARK 200 FOR SHELL : 3.640 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SNB, SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 10 MM TRIS-HCL PH REMARK 280 7.5, 100 MM NACL, 5 MM DTT. PRECIPITANT COCKTAIL: 20% PEG 20000, REMARK 280 100 MM LITHIUM CHLORIDE, 100 MM SODIUM ACETATE, MICROBATCH UNDER REMARK 280 OIL, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 33.91450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 GLY A 3 REMARK 465 PRO A 4 REMARK 465 GLU A 5 REMARK 465 PRO A 6 REMARK 465 VAL A 7 REMARK 465 PRO A 8 REMARK 465 ALA A 9 REMARK 465 GLY A 10 REMARK 465 PRO A 11 REMARK 465 PRO A 12 REMARK 465 PRO A 13 REMARK 465 ASP A 14 REMARK 465 PRO A 15 REMARK 465 THR A 16 REMARK 465 PRO A 17 REMARK 465 PRO A 18 REMARK 465 ARG A 19 REMARK 465 ARG A 20 REMARK 465 ALA A 21 REMARK 465 GLY A 22 REMARK 465 SER A 23 REMARK 465 VAL A 24 REMARK 465 TRP A 25 REMARK 465 ALA A 26 REMARK 465 HIS A 27 REMARK 465 VAL A 28 REMARK 465 GLY A 29 REMARK 465 GLN A 30 REMARK 465 HIS A 31 REMARK 465 PHE A 32 REMARK 465 THR A 33 REMARK 465 VAL A 209 REMARK 465 THR A 210 REMARK 465 ASN A 211 REMARK 465 THR A 212 REMARK 465 HIS A 213 REMARK 465 GLN A 214 REMARK 465 ILE A 215 REMARK 465 HIS A 400 REMARK 465 HIS A 401 REMARK 465 HIS A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 HIS A 405 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 GLY B 3 REMARK 465 PRO B 4 REMARK 465 GLU B 5 REMARK 465 PRO B 6 REMARK 465 VAL B 7 REMARK 465 PRO B 8 REMARK 465 ALA B 9 REMARK 465 GLY B 10 REMARK 465 PRO B 11 REMARK 465 PRO B 12 REMARK 465 PRO B 13 REMARK 465 ASP B 14 REMARK 465 PRO B 15 REMARK 465 THR B 16 REMARK 465 PRO B 17 REMARK 465 PRO B 18 REMARK 465 ARG B 19 REMARK 465 ARG B 20 REMARK 465 ALA B 21 REMARK 465 GLY B 22 REMARK 465 SER B 23 REMARK 465 VAL B 24 REMARK 465 TRP B 25 REMARK 465 ALA B 26 REMARK 465 HIS B 27 REMARK 465 VAL B 28 REMARK 465 GLY B 29 REMARK 465 GLN B 30 REMARK 465 HIS B 31 REMARK 465 PHE B 32 REMARK 465 THR B 33 REMARK 465 VAL B 209 REMARK 465 THR B 210 REMARK 465 ASN B 211 REMARK 465 THR B 212 REMARK 465 HIS B 213 REMARK 465 GLN B 214 REMARK 465 ILE B 215 REMARK 465 HIS B 400 REMARK 465 HIS B 401 REMARK 465 HIS B 402 REMARK 465 HIS B 403 REMARK 465 HIS B 404 REMARK 465 HIS B 405 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 206 CD - NE - CZ ANGL. DEV. = 9.6 DEGREES REMARK 500 ARG A 206 NE - CZ - NH1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG A 206 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ARG A 259 CD - NE - CZ ANGL. DEV. = 10.2 DEGREES REMARK 500 ARG A 259 NE - CZ - NH1 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG A 259 NE - CZ - NH2 ANGL. DEV. = -6.9 DEGREES REMARK 500 ARG A 314 NE - CZ - NH1 ANGL. DEV. = 5.3 DEGREES REMARK 500 ARG A 314 NE - CZ - NH2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG B 206 CD - NE - CZ ANGL. DEV. = 9.1 DEGREES REMARK 500 ARG B 206 NE - CZ - NH1 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG B 206 NE - CZ - NH2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ARG B 259 CD - NE - CZ ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG B 259 NE - CZ - NH1 ANGL. DEV. = -7.3 DEGREES REMARK 500 ARG B 259 NE - CZ - NH2 ANGL. DEV. = 7.0 DEGREES REMARK 500 ARG B 314 NE - CZ - NH1 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 314 NE - CZ - NH2 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 128 -106.26 -76.80 REMARK 500 ALA A 129 108.40 -54.25 REMARK 500 GLU A 131 112.88 -175.49 REMARK 500 SER A 133 -173.03 -65.76 REMARK 500 LEU A 263 125.17 -30.92 REMARK 500 SER A 274 34.12 39.02 REMARK 500 ALA A 302 -63.61 -127.99 REMARK 500 SER A 305 57.84 -168.15 REMARK 500 PRO B 128 -105.97 -77.11 REMARK 500 ALA B 129 108.37 -54.57 REMARK 500 GLU B 131 112.85 -175.38 REMARK 500 SER B 133 -172.90 -65.54 REMARK 500 LEU B 263 125.71 -30.70 REMARK 500 SER B 274 34.70 39.22 REMARK 500 ALA B 302 -63.74 -127.78 REMARK 500 SER B 305 57.79 -168.47 REMARK 500 SER B 397 16.68 -68.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 AUTHORS STATE THAT, ACCORDING TO THE DALI SERVER, SEVERAL REMARK 600 STRUCTURAL HOMOLOGS OF DR_0571 HAVE FAD, WHICH ADP MOIETY REMARK 600 SUPERIMPOSES WELL ONTO THE BOUND ADP OF DR_0571. THIS MAY REMARK 600 SUGGEST THAT THIS PROTEIN MAY ALSO BIND FAD. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 411 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: DRR125 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT ELECTRON DENSITY UNAMBIGUOUSLY REMARK 999 SHOWS THAT RESIDUE 397 IS SERINE NOT GLYCINE. REMARK 999 THIS MAY BE EITHER A CLONING ERROR, OR, THE PUBLIC REMARK 999 SEQUENCE RECORD IS INCORRECT AT POSITION 397. DBREF 3C4N A 1 397 UNP Q9RWU4 Q9RWU4_DEIRA 1 397 DBREF 3C4N B 1 397 UNP Q9RWU4 Q9RWU4_DEIRA 1 397 SEQADV 3C4N SER A 397 UNP Q9RWU4 GLY 397 SEE REMARK 999 SEQADV 3C4N LEU A 398 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N GLU A 399 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS A 400 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS A 401 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS A 402 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS A 403 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS A 404 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS A 405 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N SER B 397 UNP Q9RWU4 GLY 397 SEE REMARK 999 SEQADV 3C4N LEU B 398 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N GLU B 399 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS B 400 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS B 401 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS B 402 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS B 403 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS B 404 UNP Q9RWU4 EXPRESSION TAG SEQADV 3C4N HIS B 405 UNP Q9RWU4 EXPRESSION TAG SEQRES 1 A 405 MSE THR GLY PRO GLU PRO VAL PRO ALA GLY PRO PRO PRO SEQRES 2 A 405 ASP PRO THR PRO PRO ARG ARG ALA GLY SER VAL TRP ALA SEQRES 3 A 405 HIS VAL GLY GLN HIS PHE THR GLU GLU ALA PHE ASP ILE SEQRES 4 A 405 VAL VAL ILE GLY ALA GLY ARG MSE GLY ALA ALA CYS ALA SEQRES 5 A 405 PHE TYR LEU ARG GLN LEU ALA PRO GLY ARG SER LEU LEU SEQRES 6 A 405 LEU VAL GLU GLU GLY GLY LEU PRO ASN GLU GLU GLY ALA SEQRES 7 A 405 THR ILE LEU ALA PRO GLY VAL TRP THR ALA GLN ASP ILE SEQRES 8 A 405 PRO ALA GLY GLN GLU ALA GLN ALA GLU TRP THR ARG GLU SEQRES 9 A 405 GLN LEU LEU GLY ALA LEU GLY SER GLY LYS THR LEU GLU SEQRES 10 A 405 VAL GLU ASP ARG PRO LEU LEU HIS LEU LEU PRO ALA GLY SEQRES 11 A 405 GLU GLY SER GLY LEU THR PRO THR LEU ASP ALA LEU ALA SEQRES 12 A 405 ASP PHE PRO GLU ALA LEU ALA LEU LEU ASP PRO ALA ARG SEQRES 13 A 405 LEU PRO VAL ALA ARG VAL ASP PRO ARG ALA LEU THR TYR SEQRES 14 A 405 ARG PRO GLY SER LEU ALA LEU LEU ALA ALA GLN GLN ALA SEQRES 15 A 405 ILE GLY GLN GLY ALA GLY LEU LEU LEU ASN THR ARG ALA SEQRES 16 A 405 GLU LEU VAL PRO GLY GLY VAL ARG LEU HIS ARG LEU THR SEQRES 17 A 405 VAL THR ASN THR HIS GLN ILE VAL VAL HIS GLU THR ARG SEQRES 18 A 405 GLN ILE ARG ALA GLY VAL ILE ILE VAL ALA ALA GLY ALA SEQRES 19 A 405 ALA GLY PRO ALA LEU VAL GLU GLN GLY LEU GLY LEU HIS SEQRES 20 A 405 THR ARG HIS GLY ARG ALA TYR ARG GLN PHE PRO ARG LEU SEQRES 21 A 405 ASP LEU LEU SER GLY ALA GLN THR PRO VAL LEU ARG ALA SEQRES 22 A 405 SER GLY LEU THR LEU ARG PRO GLN ASN GLY GLY TYR THR SEQRES 23 A 405 LEU VAL PRO ALA ILE HIS HIS ARG ASP PRO HIS GLY TYR SEQRES 24 A 405 HIS PRO ALA GLY GLY SER LEU THR GLY VAL PRO THR GLY SEQRES 25 A 405 LEU ARG ARG GLU LEU LEU GLU ASP LEU VAL GLY LEU MSE SEQRES 26 A 405 ASP ALA VAL PRO ALA LEU ALA GLY GLU GLY LEU GLU LEU SEQRES 27 A 405 GLY ARG SER SER ALA ASP VAL PRO GLY ALA TRP LEU ALA SEQRES 28 A 405 LEU PRO GLY GLY ARG PRO ASP ALA PRO PRO GLN ALA GLU SEQRES 29 A 405 GLU LEU ALA PRO GLY LEU HIS LEU LEU LEU GLY GLY PRO SEQRES 30 A 405 LEU ALA ASP THR LEU GLY LEU ALA ALA ALA HIS GLU LEU SEQRES 31 A 405 ALA GLN ARG VAL SER ALA SER LEU GLU HIS HIS HIS HIS SEQRES 32 A 405 HIS HIS SEQRES 1 B 405 MSE THR GLY PRO GLU PRO VAL PRO ALA GLY PRO PRO PRO SEQRES 2 B 405 ASP PRO THR PRO PRO ARG ARG ALA GLY SER VAL TRP ALA SEQRES 3 B 405 HIS VAL GLY GLN HIS PHE THR GLU GLU ALA PHE ASP ILE SEQRES 4 B 405 VAL VAL ILE GLY ALA GLY ARG MSE GLY ALA ALA CYS ALA SEQRES 5 B 405 PHE TYR LEU ARG GLN LEU ALA PRO GLY ARG SER LEU LEU SEQRES 6 B 405 LEU VAL GLU GLU GLY GLY LEU PRO ASN GLU GLU GLY ALA SEQRES 7 B 405 THR ILE LEU ALA PRO GLY VAL TRP THR ALA GLN ASP ILE SEQRES 8 B 405 PRO ALA GLY GLN GLU ALA GLN ALA GLU TRP THR ARG GLU SEQRES 9 B 405 GLN LEU LEU GLY ALA LEU GLY SER GLY LYS THR LEU GLU SEQRES 10 B 405 VAL GLU ASP ARG PRO LEU LEU HIS LEU LEU PRO ALA GLY SEQRES 11 B 405 GLU GLY SER GLY LEU THR PRO THR LEU ASP ALA LEU ALA SEQRES 12 B 405 ASP PHE PRO GLU ALA LEU ALA LEU LEU ASP PRO ALA ARG SEQRES 13 B 405 LEU PRO VAL ALA ARG VAL ASP PRO ARG ALA LEU THR TYR SEQRES 14 B 405 ARG PRO GLY SER LEU ALA LEU LEU ALA ALA GLN GLN ALA SEQRES 15 B 405 ILE GLY GLN GLY ALA GLY LEU LEU LEU ASN THR ARG ALA SEQRES 16 B 405 GLU LEU VAL PRO GLY GLY VAL ARG LEU HIS ARG LEU THR SEQRES 17 B 405 VAL THR ASN THR HIS GLN ILE VAL VAL HIS GLU THR ARG SEQRES 18 B 405 GLN ILE ARG ALA GLY VAL ILE ILE VAL ALA ALA GLY ALA SEQRES 19 B 405 ALA GLY PRO ALA LEU VAL GLU GLN GLY LEU GLY LEU HIS SEQRES 20 B 405 THR ARG HIS GLY ARG ALA TYR ARG GLN PHE PRO ARG LEU SEQRES 21 B 405 ASP LEU LEU SER GLY ALA GLN THR PRO VAL LEU ARG ALA SEQRES 22 B 405 SER GLY LEU THR LEU ARG PRO GLN ASN GLY GLY TYR THR SEQRES 23 B 405 LEU VAL PRO ALA ILE HIS HIS ARG ASP PRO HIS GLY TYR SEQRES 24 B 405 HIS PRO ALA GLY GLY SER LEU THR GLY VAL PRO THR GLY SEQRES 25 B 405 LEU ARG ARG GLU LEU LEU GLU ASP LEU VAL GLY LEU MSE SEQRES 26 B 405 ASP ALA VAL PRO ALA LEU ALA GLY GLU GLY LEU GLU LEU SEQRES 27 B 405 GLY ARG SER SER ALA ASP VAL PRO GLY ALA TRP LEU ALA SEQRES 28 B 405 LEU PRO GLY GLY ARG PRO ASP ALA PRO PRO GLN ALA GLU SEQRES 29 B 405 GLU LEU ALA PRO GLY LEU HIS LEU LEU LEU GLY GLY PRO SEQRES 30 B 405 LEU ALA ASP THR LEU GLY LEU ALA ALA ALA HIS GLU LEU SEQRES 31 B 405 ALA GLN ARG VAL SER ALA SER LEU GLU HIS HIS HIS HIS SEQRES 32 B 405 HIS HIS MODRES 3C4N MSE A 47 MET SELENOMETHIONINE MODRES 3C4N MSE A 325 MET SELENOMETHIONINE MODRES 3C4N MSE B 47 MET SELENOMETHIONINE MODRES 3C4N MSE B 325 MET SELENOMETHIONINE HET MSE A 47 8 HET MSE A 325 8 HET MSE B 47 8 HET MSE B 325 8 HET ADP A 411 27 HET ADP B 411 27 HETNAM MSE SELENOMETHIONINE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 5 HOH *372(H2 O) HELIX 1 1 GLY A 45 ALA A 59 1 15 HELIX 2 2 GLY A 77 ALA A 82 1 6 HELIX 3 3 THR A 87 ILE A 91 5 5 HELIX 4 4 GLN A 95 GLY A 108 1 14 HELIX 5 5 ALA A 109 SER A 112 5 4 HELIX 6 6 THR A 138 LEU A 142 1 5 HELIX 7 7 PHE A 145 ALA A 150 1 6 HELIX 8 8 ARG A 170 GLY A 184 1 15 HELIX 9 9 ALA A 232 ALA A 234 5 3 HELIX 10 10 ALA A 235 GLY A 245 1 11 HELIX 11 11 ARG A 314 MSE A 325 1 12 HELIX 12 12 VAL A 328 GLY A 333 5 6 HELIX 13 13 SER A 341 VAL A 345 5 5 HELIX 14 14 PRO A 353 ARG A 356 5 4 HELIX 15 15 LEU A 378 GLU A 399 1 22 HELIX 16 16 GLY B 45 ALA B 59 1 15 HELIX 17 17 GLY B 77 ALA B 82 1 6 HELIX 18 18 THR B 87 ILE B 91 5 5 HELIX 19 19 GLN B 95 GLY B 108 1 14 HELIX 20 20 ALA B 109 SER B 112 5 4 HELIX 21 21 THR B 138 LEU B 142 1 5 HELIX 22 22 PHE B 145 ALA B 150 1 6 HELIX 23 23 ARG B 170 GLY B 184 1 15 HELIX 24 24 ALA B 232 ALA B 234 5 3 HELIX 25 25 ALA B 235 GLY B 245 1 11 HELIX 26 26 ARG B 314 MSE B 325 1 12 HELIX 27 27 VAL B 328 ALA B 332 5 5 HELIX 28 28 SER B 341 VAL B 345 5 5 HELIX 29 29 PRO B 353 ARG B 356 5 4 HELIX 30 30 LEU B 378 SER B 397 1 20 SHEET 1 A 6 GLY A 188 LEU A 190 0 SHEET 2 A 6 LEU A 64 VAL A 67 1 N LEU A 64 O GLY A 188 SHEET 3 A 6 ALA A 36 ILE A 42 1 N VAL A 41 O VAL A 67 SHEET 4 A 6 ARG A 221 VAL A 230 1 O ILE A 229 N ILE A 42 SHEET 5 A 6 GLY A 201 HIS A 205 -1 N LEU A 204 O ARG A 221 SHEET 6 A 6 ARG A 194 VAL A 198 -1 N GLU A 196 O ARG A 203 SHEET 1 B 6 GLY A 188 LEU A 190 0 SHEET 2 B 6 LEU A 64 VAL A 67 1 N LEU A 64 O GLY A 188 SHEET 3 B 6 ALA A 36 ILE A 42 1 N VAL A 41 O VAL A 67 SHEET 4 B 6 ARG A 221 VAL A 230 1 O ILE A 229 N ILE A 42 SHEET 5 B 6 LEU A 370 LEU A 374 1 O HIS A 371 N VAL A 230 SHEET 6 B 6 GLN A 362 ALA A 367 -1 N ALA A 367 O LEU A 370 SHEET 1 C 3 VAL A 85 TRP A 86 0 SHEET 2 C 3 LEU A 167 TYR A 169 -1 O LEU A 167 N TRP A 86 SHEET 3 C 3 VAL A 118 ASP A 120 -1 N GLU A 119 O THR A 168 SHEET 1 D 7 THR A 136 PRO A 137 0 SHEET 2 D 7 VAL A 159 ASP A 163 -1 O ALA A 160 N THR A 136 SHEET 3 D 7 LEU A 123 LEU A 127 -1 N LEU A 127 O VAL A 159 SHEET 4 D 7 VAL A 270 ALA A 273 1 O VAL A 270 N LEU A 124 SHEET 5 D 7 LEU A 276 GLN A 281 -1 O LEU A 276 N ALA A 273 SHEET 6 D 7 GLY A 284 VAL A 288 -1 O THR A 286 N ARG A 279 SHEET 7 D 7 ARG A 259 LEU A 260 -1 N LEU A 260 O TYR A 285 SHEET 1 E 2 GLY A 251 GLN A 256 0 SHEET 2 E 2 GLY A 347 LEU A 352 -1 O LEU A 352 N GLY A 251 SHEET 1 F 6 GLY B 188 LEU B 190 0 SHEET 2 F 6 LEU B 64 VAL B 67 1 N LEU B 64 O GLY B 188 SHEET 3 F 6 ALA B 36 ILE B 42 1 N VAL B 41 O VAL B 67 SHEET 4 F 6 ARG B 221 VAL B 230 1 O ILE B 229 N ILE B 42 SHEET 5 F 6 GLY B 201 HIS B 205 -1 N LEU B 204 O ARG B 221 SHEET 6 F 6 ARG B 194 VAL B 198 -1 N GLU B 196 O ARG B 203 SHEET 1 G 6 GLY B 188 LEU B 190 0 SHEET 2 G 6 LEU B 64 VAL B 67 1 N LEU B 64 O GLY B 188 SHEET 3 G 6 ALA B 36 ILE B 42 1 N VAL B 41 O VAL B 67 SHEET 4 G 6 ARG B 221 VAL B 230 1 O ILE B 229 N ILE B 42 SHEET 5 G 6 LEU B 370 LEU B 374 1 O HIS B 371 N VAL B 230 SHEET 6 G 6 GLN B 362 ALA B 367 -1 N ALA B 367 O LEU B 370 SHEET 1 H 3 VAL B 85 TRP B 86 0 SHEET 2 H 3 LEU B 167 TYR B 169 -1 O LEU B 167 N TRP B 86 SHEET 3 H 3 VAL B 118 ASP B 120 -1 N GLU B 119 O THR B 168 SHEET 1 I 7 THR B 136 PRO B 137 0 SHEET 2 I 7 VAL B 159 ASP B 163 -1 O ALA B 160 N THR B 136 SHEET 3 I 7 LEU B 123 LEU B 127 -1 N LEU B 127 O VAL B 159 SHEET 4 I 7 VAL B 270 ALA B 273 1 O VAL B 270 N LEU B 124 SHEET 5 I 7 LEU B 276 GLN B 281 -1 O LEU B 276 N ALA B 273 SHEET 6 I 7 GLY B 284 VAL B 288 -1 O THR B 286 N ARG B 279 SHEET 7 I 7 ARG B 259 LEU B 260 -1 N LEU B 260 O TYR B 285 SHEET 1 J 2 GLY B 251 GLN B 256 0 SHEET 2 J 2 GLY B 347 LEU B 352 -1 O LEU B 352 N GLY B 251 LINK C ARG A 46 N MSE A 47 1555 1555 1.33 LINK C MSE A 47 N GLY A 48 1555 1555 1.33 LINK C LEU A 324 N MSE A 325 1555 1555 1.33 LINK C MSE A 325 N ASP A 326 1555 1555 1.32 LINK C ARG B 46 N MSE B 47 1555 1555 1.33 LINK C MSE B 47 N GLY B 48 1555 1555 1.33 LINK C LEU B 324 N MSE B 325 1555 1555 1.33 LINK C MSE B 325 N ASP B 326 1555 1555 1.32 CISPEP 1 LEU A 72 PRO A 73 0 0.14 CISPEP 2 LEU B 72 PRO B 73 0 -0.42 SITE 1 AC1 16 ILE A 42 GLY A 43 GLY A 45 ARG A 46 SITE 2 AC1 16 GLU A 68 GLU A 69 ASN A 74 ALA A 78 SITE 3 AC1 16 THR A 79 THR A 193 ARG A 194 ALA A 195 SITE 4 AC1 16 ALA A 231 ALA A 232 GLY A 233 LEU A 239 SITE 1 AC2 16 ILE B 42 GLY B 43 GLY B 45 ARG B 46 SITE 2 AC2 16 GLU B 68 GLU B 69 ASN B 74 ALA B 78 SITE 3 AC2 16 THR B 79 THR B 193 ARG B 194 ALA B 195 SITE 4 AC2 16 ALA B 231 ALA B 232 GLY B 233 LEU B 239 CRYST1 83.627 67.829 83.645 90.00 91.14 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011958 0.000000 0.000238 0.00000 SCALE2 0.000000 0.014743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011958 0.00000