data_3C5L # _entry.id 3C5L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3C5L pdb_00003c5l 10.2210/pdb3c5l/pdb RCSB RCSB046369 ? ? WWPDB D_1000046369 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-17 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 4 'Structure model' 1 3 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 4 'Structure model' pdbx_entry_details 7 4 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3C5L _pdbx_database_status.recvd_initial_deposition_date 2008-01-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lim, D.C.' 1 'Yaffe, M.B.' 2 # _citation.id primary _citation.title 'Structural and functional analyses of minimal phosphopeptides targeting the polo-box domain of polo-like kinase 1.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 16 _citation.page_first 876 _citation.page_last 882 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19597481 _citation.pdbx_database_id_DOI 10.1038/nsmb.1628 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yun, S.M.' 1 ? primary 'Moulaei, T.' 2 ? primary 'Lim, D.' 3 ? primary 'Bang, J.K.' 4 ? primary 'Park, J.E.' 5 ? primary 'Shenoy, S.R.' 6 ? primary 'Liu, F.' 7 ? primary 'Kang, Y.H.' 8 ? primary 'Liao, C.' 9 ? primary 'Soung, N.K.' 10 ? primary 'Lee, S.' 11 ? primary 'Yoon, D.Y.' 12 ? primary 'Lim, Y.' 13 ? primary 'Lee, D.H.' 14 ? primary 'Otaka, A.' 15 ? primary 'Appella, E.' 16 ? primary 'McMahon, J.B.' 17 ? primary 'Nicklaus, M.C.' 18 ? primary 'Burke, T.R.' 19 ? primary 'Yaffe, M.B.' 20 ? primary 'Wlodawer, A.' 21 ? primary 'Lee, K.S.' 22 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Serine/threonine-protein kinase PLK1' 25595.232 1 2.7.11.21 ? 'Polo Box 1, Polo Box 2, UNP residues 373-593' ? 2 polymer syn Peptide 618.553 1 ? ? ? ? 3 water nat water 18.015 35 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Polo-like kinase 1, PLK-1, Serine/threonine-protein kinase 13, STPK13' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;HLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQ YIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSVQI NFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSS ; ;HLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQ YIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSVQI NFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSS ; A ? 2 'polypeptide(L)' no yes 'PPHS(TPO)' PPHST B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 HIS n 1 2 LEU n 1 3 SER n 1 4 ASP n 1 5 MET n 1 6 LEU n 1 7 GLN n 1 8 GLN n 1 9 LEU n 1 10 HIS n 1 11 SER n 1 12 VAL n 1 13 ASN n 1 14 ALA n 1 15 SER n 1 16 LYS n 1 17 PRO n 1 18 SER n 1 19 GLU n 1 20 ARG n 1 21 GLY n 1 22 LEU n 1 23 VAL n 1 24 ARG n 1 25 GLN n 1 26 GLU n 1 27 GLU n 1 28 ALA n 1 29 GLU n 1 30 ASP n 1 31 PRO n 1 32 ALA n 1 33 CYS n 1 34 ILE n 1 35 PRO n 1 36 ILE n 1 37 PHE n 1 38 TRP n 1 39 VAL n 1 40 SER n 1 41 LYS n 1 42 TRP n 1 43 VAL n 1 44 ASP n 1 45 TYR n 1 46 SER n 1 47 ASP n 1 48 LYS n 1 49 TYR n 1 50 GLY n 1 51 LEU n 1 52 GLY n 1 53 TYR n 1 54 GLN n 1 55 LEU n 1 56 CYS n 1 57 ASP n 1 58 ASN n 1 59 SER n 1 60 VAL n 1 61 GLY n 1 62 VAL n 1 63 LEU n 1 64 PHE n 1 65 ASN n 1 66 ASP n 1 67 SER n 1 68 THR n 1 69 ARG n 1 70 LEU n 1 71 ILE n 1 72 LEU n 1 73 TYR n 1 74 ASN n 1 75 ASP n 1 76 GLY n 1 77 ASP n 1 78 SER n 1 79 LEU n 1 80 GLN n 1 81 TYR n 1 82 ILE n 1 83 GLU n 1 84 ARG n 1 85 ASP n 1 86 GLY n 1 87 THR n 1 88 GLU n 1 89 SER n 1 90 TYR n 1 91 LEU n 1 92 THR n 1 93 VAL n 1 94 SER n 1 95 SER n 1 96 HIS n 1 97 PRO n 1 98 ASN n 1 99 SER n 1 100 LEU n 1 101 MET n 1 102 LYS n 1 103 LYS n 1 104 ILE n 1 105 THR n 1 106 LEU n 1 107 LEU n 1 108 LYS n 1 109 TYR n 1 110 PHE n 1 111 ARG n 1 112 ASN n 1 113 TYR n 1 114 MET n 1 115 SER n 1 116 GLU n 1 117 HIS n 1 118 LEU n 1 119 LEU n 1 120 LYS n 1 121 ALA n 1 122 GLY n 1 123 ALA n 1 124 ASN n 1 125 ILE n 1 126 THR n 1 127 PRO n 1 128 ARG n 1 129 GLU n 1 130 GLY n 1 131 ASP n 1 132 GLU n 1 133 LEU n 1 134 ALA n 1 135 ARG n 1 136 LEU n 1 137 PRO n 1 138 TYR n 1 139 LEU n 1 140 ARG n 1 141 THR n 1 142 TRP n 1 143 PHE n 1 144 ARG n 1 145 THR n 1 146 ARG n 1 147 SER n 1 148 ALA n 1 149 ILE n 1 150 ILE n 1 151 LEU n 1 152 HIS n 1 153 LEU n 1 154 SER n 1 155 ASN n 1 156 GLY n 1 157 SER n 1 158 VAL n 1 159 GLN n 1 160 ILE n 1 161 ASN n 1 162 PHE n 1 163 PHE n 1 164 GLN n 1 165 ASP n 1 166 HIS n 1 167 THR n 1 168 LYS n 1 169 LEU n 1 170 ILE n 1 171 LEU n 1 172 CYS n 1 173 PRO n 1 174 LEU n 1 175 MET n 1 176 ALA n 1 177 ALA n 1 178 VAL n 1 179 THR n 1 180 TYR n 1 181 ILE n 1 182 ASP n 1 183 GLU n 1 184 LYS n 1 185 ARG n 1 186 ASP n 1 187 PHE n 1 188 ARG n 1 189 THR n 1 190 TYR n 1 191 ARG n 1 192 LEU n 1 193 SER n 1 194 LEU n 1 195 LEU n 1 196 GLU n 1 197 GLU n 1 198 TYR n 1 199 GLY n 1 200 CYS n 1 201 CYS n 1 202 LYS n 1 203 GLU n 1 204 LEU n 1 205 ALA n 1 206 SER n 1 207 ARG n 1 208 LEU n 1 209 ARG n 1 210 TYR n 1 211 ALA n 1 212 ARG n 1 213 THR n 1 214 MET n 1 215 VAL n 1 216 ASP n 1 217 LYS n 1 218 LEU n 1 219 LEU n 1 220 SER n 1 221 SER n 2 1 PRO n 2 2 PRO n 2 3 HIS n 2 4 SER n 2 5 TPO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PLK1, PLK' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TPO 'L-peptide linking' n PHOSPHOTHREONINE PHOSPHONOTHREONINE 'C4 H10 N O6 P' 199.099 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 HIS 1 373 373 HIS HIS A . n A 1 2 LEU 2 374 374 LEU LEU A . n A 1 3 SER 3 375 375 SER SER A . n A 1 4 ASP 4 376 376 ASP ASP A . n A 1 5 MET 5 377 377 MET MET A . n A 1 6 LEU 6 378 378 LEU LEU A . n A 1 7 GLN 7 379 379 GLN GLN A . n A 1 8 GLN 8 380 380 GLN GLN A . n A 1 9 LEU 9 381 381 LEU LEU A . n A 1 10 HIS 10 382 382 HIS HIS A . n A 1 11 SER 11 383 383 SER SER A . n A 1 12 VAL 12 384 384 VAL VAL A . n A 1 13 ASN 13 385 385 ASN ASN A . n A 1 14 ALA 14 386 386 ALA ALA A . n A 1 15 SER 15 387 387 SER SER A . n A 1 16 LYS 16 388 388 LYS LYS A . n A 1 17 PRO 17 389 389 PRO PRO A . n A 1 18 SER 18 390 390 SER SER A . n A 1 19 GLU 19 391 391 GLU GLU A . n A 1 20 ARG 20 392 392 ARG ARG A . n A 1 21 GLY 21 393 393 GLY GLY A . n A 1 22 LEU 22 394 394 LEU LEU A . n A 1 23 VAL 23 395 395 VAL VAL A . n A 1 24 ARG 24 396 396 ARG ARG A . n A 1 25 GLN 25 397 397 GLN GLN A . n A 1 26 GLU 26 398 398 GLU GLU A . n A 1 27 GLU 27 399 399 GLU GLU A . n A 1 28 ALA 28 400 400 ALA ALA A . n A 1 29 GLU 29 401 401 GLU GLU A . n A 1 30 ASP 30 402 402 ASP ASP A . n A 1 31 PRO 31 403 403 PRO PRO A . n A 1 32 ALA 32 404 404 ALA ALA A . n A 1 33 CYS 33 405 405 CYS CYS A . n A 1 34 ILE 34 406 406 ILE ILE A . n A 1 35 PRO 35 407 407 PRO PRO A . n A 1 36 ILE 36 408 408 ILE ILE A . n A 1 37 PHE 37 409 409 PHE PHE A . n A 1 38 TRP 38 410 410 TRP TRP A . n A 1 39 VAL 39 411 411 VAL VAL A . n A 1 40 SER 40 412 412 SER SER A . n A 1 41 LYS 41 413 413 LYS LYS A . n A 1 42 TRP 42 414 414 TRP TRP A . n A 1 43 VAL 43 415 415 VAL VAL A . n A 1 44 ASP 44 416 416 ASP ASP A . n A 1 45 TYR 45 417 417 TYR TYR A . n A 1 46 SER 46 418 418 SER SER A . n A 1 47 ASP 47 419 419 ASP ASP A . n A 1 48 LYS 48 420 420 LYS LYS A . n A 1 49 TYR 49 421 421 TYR TYR A . n A 1 50 GLY 50 422 422 GLY GLY A . n A 1 51 LEU 51 423 423 LEU LEU A . n A 1 52 GLY 52 424 424 GLY GLY A . n A 1 53 TYR 53 425 425 TYR TYR A . n A 1 54 GLN 54 426 426 GLN GLN A . n A 1 55 LEU 55 427 427 LEU LEU A . n A 1 56 CYS 56 428 428 CYS CYS A . n A 1 57 ASP 57 429 429 ASP ASP A . n A 1 58 ASN 58 430 430 ASN ASN A . n A 1 59 SER 59 431 431 SER SER A . n A 1 60 VAL 60 432 432 VAL VAL A . n A 1 61 GLY 61 433 433 GLY GLY A . n A 1 62 VAL 62 434 434 VAL VAL A . n A 1 63 LEU 63 435 435 LEU LEU A . n A 1 64 PHE 64 436 436 PHE PHE A . n A 1 65 ASN 65 437 437 ASN ASN A . n A 1 66 ASP 66 438 438 ASP ASP A . n A 1 67 SER 67 439 439 SER SER A . n A 1 68 THR 68 440 440 THR THR A . n A 1 69 ARG 69 441 441 ARG ARG A . n A 1 70 LEU 70 442 442 LEU LEU A . n A 1 71 ILE 71 443 443 ILE ILE A . n A 1 72 LEU 72 444 444 LEU LEU A . n A 1 73 TYR 73 445 445 TYR TYR A . n A 1 74 ASN 74 446 446 ASN ASN A . n A 1 75 ASP 75 447 447 ASP ASP A . n A 1 76 GLY 76 448 448 GLY GLY A . n A 1 77 ASP 77 449 449 ASP ASP A . n A 1 78 SER 78 450 450 SER SER A . n A 1 79 LEU 79 451 451 LEU LEU A . n A 1 80 GLN 80 452 452 GLN GLN A . n A 1 81 TYR 81 453 453 TYR TYR A . n A 1 82 ILE 82 454 454 ILE ILE A . n A 1 83 GLU 83 455 455 GLU GLU A . n A 1 84 ARG 84 456 456 ARG ARG A . n A 1 85 ASP 85 457 457 ASP ASP A . n A 1 86 GLY 86 458 458 GLY GLY A . n A 1 87 THR 87 459 459 THR THR A . n A 1 88 GLU 88 460 460 GLU GLU A . n A 1 89 SER 89 461 461 SER SER A . n A 1 90 TYR 90 462 462 TYR TYR A . n A 1 91 LEU 91 463 463 LEU LEU A . n A 1 92 THR 92 464 464 THR THR A . n A 1 93 VAL 93 465 465 VAL VAL A . n A 1 94 SER 94 466 466 SER SER A . n A 1 95 SER 95 467 467 SER SER A . n A 1 96 HIS 96 468 468 HIS HIS A . n A 1 97 PRO 97 469 469 PRO PRO A . n A 1 98 ASN 98 470 470 ASN ASN A . n A 1 99 SER 99 471 471 SER SER A . n A 1 100 LEU 100 472 472 LEU LEU A . n A 1 101 MET 101 473 473 MET MET A . n A 1 102 LYS 102 474 474 LYS LYS A . n A 1 103 LYS 103 475 475 LYS LYS A . n A 1 104 ILE 104 476 476 ILE ILE A . n A 1 105 THR 105 477 477 THR THR A . n A 1 106 LEU 106 478 478 LEU LEU A . n A 1 107 LEU 107 479 479 LEU LEU A . n A 1 108 LYS 108 480 480 LYS LYS A . n A 1 109 TYR 109 481 481 TYR TYR A . n A 1 110 PHE 110 482 482 PHE PHE A . n A 1 111 ARG 111 483 483 ARG ARG A . n A 1 112 ASN 112 484 484 ASN ASN A . n A 1 113 TYR 113 485 485 TYR TYR A . n A 1 114 MET 114 486 486 MET MET A . n A 1 115 SER 115 487 487 SER SER A . n A 1 116 GLU 116 488 488 GLU GLU A . n A 1 117 HIS 117 489 489 HIS HIS A . n A 1 118 LEU 118 490 490 LEU LEU A . n A 1 119 LEU 119 491 491 LEU LEU A . n A 1 120 LYS 120 492 492 LYS LYS A . n A 1 121 ALA 121 493 493 ALA ALA A . n A 1 122 GLY 122 494 494 GLY GLY A . n A 1 123 ALA 123 495 495 ALA ALA A . n A 1 124 ASN 124 496 496 ASN ASN A . n A 1 125 ILE 125 497 497 ILE ILE A . n A 1 126 THR 126 498 498 THR THR A . n A 1 127 PRO 127 499 499 PRO PRO A . n A 1 128 ARG 128 500 500 ARG ARG A . n A 1 129 GLU 129 501 501 GLU GLU A . n A 1 130 GLY 130 502 502 GLY GLY A . n A 1 131 ASP 131 503 ? ? ? A . n A 1 132 GLU 132 504 ? ? ? A . n A 1 133 LEU 133 505 ? ? ? A . n A 1 134 ALA 134 506 ? ? ? A . n A 1 135 ARG 135 507 507 ARG ARG A . n A 1 136 LEU 136 508 508 LEU LEU A . n A 1 137 PRO 137 509 509 PRO PRO A . n A 1 138 TYR 138 510 510 TYR TYR A . n A 1 139 LEU 139 511 511 LEU LEU A . n A 1 140 ARG 140 512 512 ARG ARG A . n A 1 141 THR 141 513 513 THR THR A . n A 1 142 TRP 142 514 514 TRP TRP A . n A 1 143 PHE 143 515 515 PHE PHE A . n A 1 144 ARG 144 516 516 ARG ARG A . n A 1 145 THR 145 517 517 THR THR A . n A 1 146 ARG 146 518 518 ARG ARG A . n A 1 147 SER 147 519 519 SER SER A . n A 1 148 ALA 148 520 520 ALA ALA A . n A 1 149 ILE 149 521 521 ILE ILE A . n A 1 150 ILE 150 522 522 ILE ILE A . n A 1 151 LEU 151 523 523 LEU LEU A . n A 1 152 HIS 152 524 524 HIS HIS A . n A 1 153 LEU 153 525 525 LEU LEU A . n A 1 154 SER 154 526 526 SER SER A . n A 1 155 ASN 155 527 527 ASN ASN A . n A 1 156 GLY 156 528 528 GLY GLY A . n A 1 157 SER 157 529 529 SER SER A . n A 1 158 VAL 158 530 530 VAL VAL A . n A 1 159 GLN 159 531 531 GLN GLN A . n A 1 160 ILE 160 532 532 ILE ILE A . n A 1 161 ASN 161 533 533 ASN ASN A . n A 1 162 PHE 162 534 534 PHE PHE A . n A 1 163 PHE 163 535 535 PHE PHE A . n A 1 164 GLN 164 536 536 GLN GLN A . n A 1 165 ASP 165 537 537 ASP ASP A . n A 1 166 HIS 166 538 538 HIS HIS A . n A 1 167 THR 167 539 539 THR THR A . n A 1 168 LYS 168 540 540 LYS LYS A . n A 1 169 LEU 169 541 541 LEU LEU A . n A 1 170 ILE 170 542 542 ILE ILE A . n A 1 171 LEU 171 543 543 LEU LEU A . n A 1 172 CYS 172 544 544 CYS CYS A . n A 1 173 PRO 173 545 545 PRO PRO A . n A 1 174 LEU 174 546 546 LEU LEU A . n A 1 175 MET 175 547 547 MET MET A . n A 1 176 ALA 176 548 548 ALA ALA A . n A 1 177 ALA 177 549 549 ALA ALA A . n A 1 178 VAL 178 550 550 VAL VAL A . n A 1 179 THR 179 551 551 THR THR A . n A 1 180 TYR 180 552 552 TYR TYR A . n A 1 181 ILE 181 553 553 ILE ILE A . n A 1 182 ASP 182 554 554 ASP ASP A . n A 1 183 GLU 183 555 555 GLU GLU A . n A 1 184 LYS 184 556 556 LYS LYS A . n A 1 185 ARG 185 557 557 ARG ARG A . n A 1 186 ASP 186 558 558 ASP ASP A . n A 1 187 PHE 187 559 559 PHE PHE A . n A 1 188 ARG 188 560 560 ARG ARG A . n A 1 189 THR 189 561 561 THR THR A . n A 1 190 TYR 190 562 562 TYR TYR A . n A 1 191 ARG 191 563 563 ARG ARG A . n A 1 192 LEU 192 564 564 LEU LEU A . n A 1 193 SER 193 565 565 SER SER A . n A 1 194 LEU 194 566 566 LEU LEU A . n A 1 195 LEU 195 567 567 LEU LEU A . n A 1 196 GLU 196 568 568 GLU GLU A . n A 1 197 GLU 197 569 569 GLU GLU A . n A 1 198 TYR 198 570 570 TYR TYR A . n A 1 199 GLY 199 571 571 GLY GLY A . n A 1 200 CYS 200 572 572 CYS CYS A . n A 1 201 CYS 201 573 573 CYS CYS A . n A 1 202 LYS 202 574 574 LYS LYS A . n A 1 203 GLU 203 575 575 GLU GLU A . n A 1 204 LEU 204 576 576 LEU LEU A . n A 1 205 ALA 205 577 577 ALA ALA A . n A 1 206 SER 206 578 578 SER SER A . n A 1 207 ARG 207 579 579 ARG ARG A . n A 1 208 LEU 208 580 580 LEU LEU A . n A 1 209 ARG 209 581 581 ARG ARG A . n A 1 210 TYR 210 582 582 TYR TYR A . n A 1 211 ALA 211 583 583 ALA ALA A . n A 1 212 ARG 212 584 584 ARG ARG A . n A 1 213 THR 213 585 585 THR THR A . n A 1 214 MET 214 586 586 MET MET A . n A 1 215 VAL 215 587 587 VAL VAL A . n A 1 216 ASP 216 588 588 ASP ASP A . n A 1 217 LYS 217 589 589 LYS LYS A . n A 1 218 LEU 218 590 590 LEU LEU A . n A 1 219 LEU 219 591 591 LEU LEU A . n A 1 220 SER 220 592 592 SER SER A . n A 1 221 SER 221 593 593 SER SER A . n B 2 1 PRO 1 1 1 PRO PRO B . n B 2 2 PRO 2 2 2 PRO PRO B . n B 2 3 HIS 3 3 3 HIS HIS B . n B 2 4 SER 4 4 4 SER SER B . n B 2 5 TPO 5 5 5 TPO TPO B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 594 2 HOH WAT A . C 3 HOH 2 595 3 HOH WAT A . C 3 HOH 3 596 4 HOH WAT A . C 3 HOH 4 597 5 HOH WAT A . C 3 HOH 5 598 7 HOH WAT A . C 3 HOH 6 599 9 HOH WAT A . C 3 HOH 7 600 10 HOH WAT A . C 3 HOH 8 601 11 HOH WAT A . C 3 HOH 9 602 12 HOH WAT A . C 3 HOH 10 603 13 HOH WAT A . C 3 HOH 11 604 14 HOH WAT A . C 3 HOH 12 605 16 HOH WAT A . C 3 HOH 13 606 17 HOH WAT A . C 3 HOH 14 607 18 HOH WAT A . C 3 HOH 15 608 19 HOH WAT A . C 3 HOH 16 609 20 HOH WAT A . C 3 HOH 17 610 21 HOH WAT A . C 3 HOH 18 611 22 HOH WAT A . C 3 HOH 19 612 23 HOH WAT A . C 3 HOH 20 613 24 HOH WAT A . C 3 HOH 21 614 25 HOH WAT A . C 3 HOH 22 615 26 HOH WAT A . C 3 HOH 23 616 27 HOH WAT A . C 3 HOH 24 617 28 HOH WAT A . C 3 HOH 25 618 29 HOH WAT A . C 3 HOH 26 619 30 HOH WAT A . C 3 HOH 27 620 32 HOH WAT A . C 3 HOH 28 621 33 HOH WAT A . C 3 HOH 29 622 34 HOH WAT A . C 3 HOH 30 623 35 HOH WAT A . C 3 HOH 31 624 31 HOH WAT A . D 3 HOH 1 6 1 HOH WAT B . D 3 HOH 2 7 6 HOH WAT B . D 3 HOH 3 8 8 HOH WAT B . D 3 HOH 4 9 15 HOH WAT B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 EPMR phasing . ? 5 # _cell.entry_id 3C5L _cell.length_a 35.442 _cell.length_b 66.495 _cell.length_c 105.817 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3C5L _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 3C5L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details 'PEG3350, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-08-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97949 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97949 # _reflns.entry_id 3C5L _reflns.observed_criterion_sigma_I 5 _reflns.observed_criterion_sigma_F 5 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.33 _reflns.number_obs 10764 _reflns.number_all 10482 _reflns.percent_possible_obs 97.4 _reflns.pdbx_Rmerge_I_obs 0.051 _reflns.pdbx_Rsym_value 0.051 _reflns.pdbx_netI_over_sigmaI 27.3 _reflns.B_iso_Wilson_estimate 34.3 _reflns.pdbx_redundancy 6.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.33 _reflns_shell.d_res_low 2.41 _reflns_shell.percent_possible_all 86.5 _reflns_shell.Rmerge_I_obs 0.268 _reflns_shell.pdbx_Rsym_value 0.268 _reflns_shell.meanI_over_sigI_obs 5.5 _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 930 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3C5L _refine.ls_number_reflns_obs 10186 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 612513.78 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.61 _refine.ls_d_res_high 2.33 _refine.ls_percent_reflns_obs 91.8 _refine.ls_R_factor_obs 0.246 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.246 _refine.ls_R_factor_R_free 0.293 _refine.ls_R_factor_R_free_error 0.013 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 529 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 41.6 _refine.aniso_B[1][1] 2.45 _refine.aniso_B[2][2] 10.38 _refine.aniso_B[3][3] -12.83 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.372851 _refine.solvent_model_param_bsol 40.2551 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 1UMW, chain A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3C5L _refine_analyze.Luzzati_coordinate_error_obs 0.35 _refine_analyze.Luzzati_sigma_a_obs 0.35 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.45 _refine_analyze.Luzzati_sigma_a_free 0.49 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1810 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 35 _refine_hist.number_atoms_total 1845 _refine_hist.d_res_high 2.33 _refine_hist.d_res_low 33.61 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.94 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.85 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.76 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.67 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.71 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.33 _refine_ls_shell.d_res_low 2.48 _refine_ls_shell.number_reflns_R_work 1032 _refine_ls_shell.R_factor_R_work 0.35 _refine_ls_shell.percent_reflns_obs 59.7 _refine_ls_shell.R_factor_R_free 0.448 _refine_ls_shell.R_factor_R_free_error 0.064 _refine_ls_shell.percent_reflns_R_free 4.5 _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 3C5L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 3C5L _struct.title 'Polo-like kinase 1 Polo box domain in complex with PPHSpT peptide' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3C5L _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;Plk1, Polo-like kinase 1, Polo box domain, phosphopeptide, ATP-binding, Nucleotide-binding, Nucleus, Phosphoprotein, Serine/threonine-protein kinase, Transferase ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP PLK1_HUMAN P53350 1 ;HLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQ YIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSVQI NFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSS ; 373 ? 2 PDB 3C5L 3C5L 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3C5L A 1 ? 221 ? P53350 373 ? 593 ? 373 593 2 2 3C5L B 1 ? 5 ? 3C5L 1 ? 5 ? 1 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 820 _pdbx_struct_assembly_prop.details ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 HIS A 1 ? SER A 15 ? HIS A 373 SER A 387 1 ? 15 HELX_P HELX_P2 2 ARG A 24 ? GLU A 29 ? ARG A 396 GLU A 401 5 ? 6 HELX_P HELX_P3 3 ASP A 30 ? ILE A 34 ? ASP A 402 ILE A 406 5 ? 5 HELX_P HELX_P4 4 SER A 94 ? HIS A 96 ? SER A 466 HIS A 468 5 ? 3 HELX_P HELX_P5 5 PRO A 97 ? SER A 99 ? PRO A 469 SER A 471 5 ? 3 HELX_P HELX_P6 6 LEU A 100 ? LEU A 118 ? LEU A 472 LEU A 490 1 ? 19 HELX_P HELX_P7 7 LEU A 192 ? GLU A 196 ? LEU A 564 GLU A 568 1 ? 5 HELX_P HELX_P8 8 CYS A 201 ? SER A 220 ? CYS A 573 SER A 592 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag both _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 4 _struct_conn.ptnr1_label_atom_id C _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id TPO _struct_conn.ptnr2_label_seq_id 5 _struct_conn.ptnr2_label_atom_id N _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 4 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id TPO _struct_conn.ptnr2_auth_seq_id 5 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.326 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id TPO _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id 5 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id . _pdbx_modification_feature.modified_residue_label_asym_id . _pdbx_modification_feature.modified_residue_label_seq_id . _pdbx_modification_feature.modified_residue_label_alt_id . _pdbx_modification_feature.auth_comp_id TPO _pdbx_modification_feature.auth_asym_id B _pdbx_modification_feature.auth_seq_id 5 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id . _pdbx_modification_feature.modified_residue_auth_asym_id . _pdbx_modification_feature.modified_residue_auth_seq_id . _pdbx_modification_feature.modified_residue_PDB_ins_code . _pdbx_modification_feature.modified_residue_symmetry . _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id THR _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id TPO _pdbx_modification_feature.type Phosphorylation _pdbx_modification_feature.category 'Named protein modification' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 39 ? ASP A 44 ? VAL A 411 ASP A 416 A 2 GLY A 50 ? LEU A 55 ? GLY A 422 LEU A 427 A 3 VAL A 60 ? PHE A 64 ? VAL A 432 PHE A 436 A 4 ARG A 69 ? LEU A 72 ? ARG A 441 LEU A 444 A 5 SER A 78 ? ILE A 82 ? SER A 450 ILE A 454 A 6 GLU A 88 ? THR A 92 ? GLU A 460 THR A 464 B 1 LEU A 139 ? THR A 145 ? LEU A 511 THR A 517 B 2 ALA A 148 ? LEU A 153 ? ALA A 520 LEU A 525 B 3 VAL A 158 ? PHE A 162 ? VAL A 530 PHE A 534 B 4 LYS A 168 ? CYS A 172 ? LYS A 540 CYS A 544 B 5 ALA A 177 ? ILE A 181 ? ALA A 549 ILE A 553 B 6 PHE A 187 ? ARG A 191 ? PHE A 559 ARG A 563 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 40 ? N SER A 412 O GLN A 54 ? O GLN A 426 A 2 3 N LEU A 51 ? N LEU A 423 O LEU A 63 ? O LEU A 435 A 3 4 N VAL A 60 ? N VAL A 432 O LEU A 72 ? O LEU A 444 A 4 5 N ARG A 69 ? N ARG A 441 O ILE A 82 ? O ILE A 454 A 5 6 N LEU A 79 ? N LEU A 451 O LEU A 91 ? O LEU A 463 B 1 2 N PHE A 143 ? N PHE A 515 O ILE A 150 ? O ILE A 522 B 2 3 N LEU A 151 ? N LEU A 523 O GLN A 159 ? O GLN A 531 B 3 4 N VAL A 158 ? N VAL A 530 O LEU A 171 ? O LEU A 543 B 4 5 N LYS A 168 ? N LYS A 540 O ILE A 181 ? O ILE A 553 B 5 6 N TYR A 180 ? N TYR A 552 O ARG A 188 ? O ARG A 560 # _pdbx_entry_details.entry_id 3C5L _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 391 ? ? -89.60 41.63 2 1 ARG A 396 ? ? -111.22 65.98 3 1 PRO A 403 ? ? -36.79 -34.48 4 1 CYS A 405 ? ? -79.17 28.79 5 1 TYR A 421 ? ? -121.30 -59.50 6 1 ASN A 430 ? ? 78.69 -2.91 7 1 ASN A 446 ? ? -65.03 2.27 8 1 ASP A 457 ? ? -53.76 4.10 9 1 THR A 459 ? ? -65.75 94.52 10 1 ASN A 496 ? ? -90.99 33.68 11 1 GLN A 536 ? ? -42.01 -70.59 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id TPO _pdbx_struct_mod_residue.label_seq_id 5 _pdbx_struct_mod_residue.auth_asym_id B _pdbx_struct_mod_residue.auth_comp_id TPO _pdbx_struct_mod_residue.auth_seq_id 5 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id THR _pdbx_struct_mod_residue.details PHOSPHOTHREONINE # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 503 ? A ASP 131 2 1 Y 1 A GLU 504 ? A GLU 132 3 1 Y 1 A LEU 505 ? A LEU 133 4 1 Y 1 A ALA 506 ? A ALA 134 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TPO N N N N 321 TPO CA C N S 322 TPO CB C N R 323 TPO CG2 C N N 324 TPO OG1 O N N 325 TPO P P N N 326 TPO O1P O N N 327 TPO O2P O N N 328 TPO O3P O N N 329 TPO C C N N 330 TPO O O N N 331 TPO OXT O N N 332 TPO H H N N 333 TPO H2 H N N 334 TPO HA H N N 335 TPO HB H N N 336 TPO HG21 H N N 337 TPO HG22 H N N 338 TPO HG23 H N N 339 TPO HOP2 H N N 340 TPO HOP3 H N N 341 TPO HXT H N N 342 TRP N N N N 343 TRP CA C N S 344 TRP C C N N 345 TRP O O N N 346 TRP CB C N N 347 TRP CG C Y N 348 TRP CD1 C Y N 349 TRP CD2 C Y N 350 TRP NE1 N Y N 351 TRP CE2 C Y N 352 TRP CE3 C Y N 353 TRP CZ2 C Y N 354 TRP CZ3 C Y N 355 TRP CH2 C Y N 356 TRP OXT O N N 357 TRP H H N N 358 TRP H2 H N N 359 TRP HA H N N 360 TRP HB2 H N N 361 TRP HB3 H N N 362 TRP HD1 H N N 363 TRP HE1 H N N 364 TRP HE3 H N N 365 TRP HZ2 H N N 366 TRP HZ3 H N N 367 TRP HH2 H N N 368 TRP HXT H N N 369 TYR N N N N 370 TYR CA C N S 371 TYR C C N N 372 TYR O O N N 373 TYR CB C N N 374 TYR CG C Y N 375 TYR CD1 C Y N 376 TYR CD2 C Y N 377 TYR CE1 C Y N 378 TYR CE2 C Y N 379 TYR CZ C Y N 380 TYR OH O N N 381 TYR OXT O N N 382 TYR H H N N 383 TYR H2 H N N 384 TYR HA H N N 385 TYR HB2 H N N 386 TYR HB3 H N N 387 TYR HD1 H N N 388 TYR HD2 H N N 389 TYR HE1 H N N 390 TYR HE2 H N N 391 TYR HH H N N 392 TYR HXT H N N 393 VAL N N N N 394 VAL CA C N S 395 VAL C C N N 396 VAL O O N N 397 VAL CB C N N 398 VAL CG1 C N N 399 VAL CG2 C N N 400 VAL OXT O N N 401 VAL H H N N 402 VAL H2 H N N 403 VAL HA H N N 404 VAL HB H N N 405 VAL HG11 H N N 406 VAL HG12 H N N 407 VAL HG13 H N N 408 VAL HG21 H N N 409 VAL HG22 H N N 410 VAL HG23 H N N 411 VAL HXT H N N 412 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TPO N CA sing N N 306 TPO N H sing N N 307 TPO N H2 sing N N 308 TPO CA CB sing N N 309 TPO CA C sing N N 310 TPO CA HA sing N N 311 TPO CB CG2 sing N N 312 TPO CB OG1 sing N N 313 TPO CB HB sing N N 314 TPO CG2 HG21 sing N N 315 TPO CG2 HG22 sing N N 316 TPO CG2 HG23 sing N N 317 TPO OG1 P sing N N 318 TPO P O1P doub N N 319 TPO P O2P sing N N 320 TPO P O3P sing N N 321 TPO O2P HOP2 sing N N 322 TPO O3P HOP3 sing N N 323 TPO C O doub N N 324 TPO C OXT sing N N 325 TPO OXT HXT sing N N 326 TRP N CA sing N N 327 TRP N H sing N N 328 TRP N H2 sing N N 329 TRP CA C sing N N 330 TRP CA CB sing N N 331 TRP CA HA sing N N 332 TRP C O doub N N 333 TRP C OXT sing N N 334 TRP CB CG sing N N 335 TRP CB HB2 sing N N 336 TRP CB HB3 sing N N 337 TRP CG CD1 doub Y N 338 TRP CG CD2 sing Y N 339 TRP CD1 NE1 sing Y N 340 TRP CD1 HD1 sing N N 341 TRP CD2 CE2 doub Y N 342 TRP CD2 CE3 sing Y N 343 TRP NE1 CE2 sing Y N 344 TRP NE1 HE1 sing N N 345 TRP CE2 CZ2 sing Y N 346 TRP CE3 CZ3 doub Y N 347 TRP CE3 HE3 sing N N 348 TRP CZ2 CH2 doub Y N 349 TRP CZ2 HZ2 sing N N 350 TRP CZ3 CH2 sing Y N 351 TRP CZ3 HZ3 sing N N 352 TRP CH2 HH2 sing N N 353 TRP OXT HXT sing N N 354 TYR N CA sing N N 355 TYR N H sing N N 356 TYR N H2 sing N N 357 TYR CA C sing N N 358 TYR CA CB sing N N 359 TYR CA HA sing N N 360 TYR C O doub N N 361 TYR C OXT sing N N 362 TYR CB CG sing N N 363 TYR CB HB2 sing N N 364 TYR CB HB3 sing N N 365 TYR CG CD1 doub Y N 366 TYR CG CD2 sing Y N 367 TYR CD1 CE1 sing Y N 368 TYR CD1 HD1 sing N N 369 TYR CD2 CE2 doub Y N 370 TYR CD2 HD2 sing N N 371 TYR CE1 CZ doub Y N 372 TYR CE1 HE1 sing N N 373 TYR CE2 CZ sing Y N 374 TYR CE2 HE2 sing N N 375 TYR CZ OH sing N N 376 TYR OH HH sing N N 377 TYR OXT HXT sing N N 378 VAL N CA sing N N 379 VAL N H sing N N 380 VAL N H2 sing N N 381 VAL CA C sing N N 382 VAL CA CB sing N N 383 VAL CA HA sing N N 384 VAL C O doub N N 385 VAL C OXT sing N N 386 VAL CB CG1 sing N N 387 VAL CB CG2 sing N N 388 VAL CB HB sing N N 389 VAL CG1 HG11 sing N N 390 VAL CG1 HG12 sing N N 391 VAL CG1 HG13 sing N N 392 VAL CG2 HG21 sing N N 393 VAL CG2 HG22 sing N N 394 VAL CG2 HG23 sing N N 395 VAL OXT HXT sing N N 396 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1UMW _pdbx_initial_refinement_model.details 'PDB entry 1UMW, chain A' # _atom_sites.entry_id 3C5L _atom_sites.fract_transf_matrix[1][1] 0.028215 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015039 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009450 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_