HEADER OXIDOREDUCTASE 07-FEB-08 3C7A TITLE A STRUCTURAL BASIS FOR SUBSTRATE AND STEREO SELECTIVITY IN OCTOPINE TITLE 2 DEHYDROGENASE (ODH-NADH) COMPND MOL_ID: 1; COMPND 2 MOLECULE: OCTOPINE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.5.1.11; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PECTEN MAXIMUS; SOURCE 3 ORGANISM_COMMON: KING SCALLOP; SOURCE 4 ORGANISM_TAXID: 6579; SOURCE 5 GENE: ODH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: E. COLI ER2566; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTYB1 KEYWDS (D, L) STEREOSPECIFIC OPINE DEHYDROGENAS, OXIDORECUTASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.H.J.SMITS,A.MUELLER,L.SCHMITT,M.K.GRIESHABER REVDAT 5 21-FEB-24 3C7A 1 REMARK REVDAT 4 25-OCT-17 3C7A 1 REMARK REVDAT 3 12-JAN-10 3C7A 1 JRNL REVDAT 2 24-FEB-09 3C7A 1 VERSN REVDAT 1 22-JUL-08 3C7A 0 JRNL AUTH S.H.SMITS,A.MUELLER,L.SCHMITT,M.K.GRIESHABER JRNL TITL A STRUCTURAL BASIS FOR SUBSTRATE SELECTIVITY AND JRNL TITL 2 STEREOSELECTIVITY IN OCTOPINE DEHYDROGENASE FROM PECTEN JRNL TITL 3 MAXIMUS. JRNL REF J.MOL.BIOL. V. 381 200 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18599075 JRNL DOI 10.1016/J.JMB.2008.06.003 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 35980 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1891 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2627 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.39 REMARK 3 BIN R VALUE (WORKING SET) : 0.2890 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.3300 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3084 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 84 REMARK 3 SOLVENT ATOMS : 453 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : -0.16000 REMARK 3 B33 (A**2) : 0.31000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.204 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.305 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.888 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3252 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4407 ; 1.071 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 406 ; 4.196 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 133 ;34.491 ;24.511 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 522 ;12.885 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ; 8.851 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 493 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2418 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 819 ; 0.152 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2102 ; 0.288 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 159 ; 0.041 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.038 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.063 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2094 ; 0.182 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3223 ; 0.319 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1356 ; 0.335 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1182 ; 0.557 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3C7A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000046430. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X12 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97854 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39705 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.16000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTO-RICKSHAW REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES PH 7.0 AND NA-CITRATE REMARK 280 RANGING FROM 1.0 TO 1.2 M , VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.25650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.90800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.90800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.62825 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.90800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.90800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.88475 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.90800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.90800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.62825 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.90800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.90800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 94.88475 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.25650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 863 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 234 O - C - N ANGL. DEV. = -14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 36 -124.34 51.18 REMARK 500 ASP A 37 40.39 -107.29 REMARK 500 GLN A 118 -165.97 61.09 REMARK 500 ARG A 155 -37.90 -132.60 REMARK 500 PHE A 234 -68.15 -104.73 REMARK 500 ASN A 323 -119.52 -134.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 PHE A 234 -13.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 414 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 415 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3C7C RELATED DB: PDB REMARK 900 RELATED ID: 3C7D RELATED DB: PDB DBREF 3C7A A 1 399 UNP Q9BHM6 Q9BHM6_PECMA 1 399 SEQADV 3C7A HIS A 400 UNP Q9BHM6 EXPRESSION TAG SEQADV 3C7A HIS A 401 UNP Q9BHM6 EXPRESSION TAG SEQADV 3C7A HIS A 402 UNP Q9BHM6 EXPRESSION TAG SEQADV 3C7A HIS A 403 UNP Q9BHM6 EXPRESSION TAG SEQADV 3C7A HIS A 404 UNP Q9BHM6 EXPRESSION TAG SEQRES 1 A 404 MET THR VAL LYS VAL CYS VAL CYS GLY GLY GLY ASN GLY SEQRES 2 A 404 ALA HIS THR LEU SER GLY LEU ALA ALA SER ARG ASP GLY SEQRES 3 A 404 VAL GLU VAL ARG VAL LEU THR LEU PHE ALA ASP GLU ALA SEQRES 4 A 404 GLU ARG TRP THR LYS ALA LEU GLY ALA ASP GLU LEU THR SEQRES 5 A 404 VAL ILE VAL ASN GLU LYS ASP GLY THR GLN THR GLU VAL SEQRES 6 A 404 LYS SER ARG PRO LYS VAL ILE THR LYS ASP PRO GLU ILE SEQRES 7 A 404 ALA ILE SER GLY ALA ASP VAL VAL ILE LEU THR VAL PRO SEQRES 8 A 404 ALA PHE ALA HIS GLU GLY TYR PHE GLN ALA MET ALA PRO SEQRES 9 A 404 TYR VAL GLN ASP SER ALA LEU ILE VAL GLY LEU PRO SER SEQRES 10 A 404 GLN ALA GLY PHE GLU PHE GLN CYS ARG ASP ILE LEU GLY SEQRES 11 A 404 ASP LYS ALA ALA ALA VAL SER MET MET SER PHE GLU THR SEQRES 12 A 404 LEU PRO TRP ALA CYS ARG ILE LYS GLU PHE GLY ARG LYS SEQRES 13 A 404 VAL GLU VAL LEU GLY THR LYS SER VAL LEU ALA ALA SER SEQRES 14 A 404 LEU ILE LYS GLY THR ALA LYS THR VAL ASP PRO LEU SER SEQRES 15 A 404 THR LEU GLN MET LEU HIS GLY ALA GLU PRO VAL PHE ARG SEQRES 16 A 404 LEU ALA LYS HIS PHE LEU GLU MET LEU ILE MET SER TYR SEQRES 17 A 404 SER PHE VAL HIS PRO ALA ILE LEU PHE GLY ARG TRP GLY SEQRES 18 A 404 SER TRP ASP GLY LYS PRO VAL PRO GLU ALA PRO LEU PHE SEQRES 19 A 404 TYR GLN GLY ILE ASP GLN ALA THR ALA ASP MET LEU THR SEQRES 20 A 404 ALA CYS SER ASN GLU CYS LYS ASP VAL ALA ASN ALA ILE SEQRES 21 A 404 MET ALA ALA CYS PRO GLY ASN ASP LEU SER ASP VAL LYS SEQRES 22 A 404 ASP ILE TYR GLN TRP TYR LEU GLU TYR TYR HIS GLU ASP SEQRES 23 A 404 ILE GLN ASP ASP HIS ASP LEU TYR HIS ALA ILE THR THR SEQRES 24 A 404 ASN LYS SER TYR LYS GLY LEU VAL HIS PRO VAL LYS ALA SEQRES 25 A 404 VAL ASP GLY GLY VAL ALA PRO ASP PHE GLY ASN ARG TYR SEQRES 26 A 404 LEU THR GLU ASP ILE PRO MET GLY MET ILE VAL PHE LYS SEQRES 27 A 404 GLY VAL ALA ILE ALA ALA GLY VAL ALA ILE PRO SER ASN SEQRES 28 A 404 ASP LYS LEU ILE MET TRP ALA GLN GLU LYS ILE GLY LYS SEQRES 29 A 404 GLU TYR LEU VAL ASP GLY ALA LEU THR GLY LYS ASP VAL SEQRES 30 A 404 ALA THR THR ARG CYS PRO GLN ARG TYR GLY PHE ASN THR SEQRES 31 A 404 LEU ASP ALA ILE LEU THR GLY LYS LYS HIS HIS HIS HIS SEQRES 32 A 404 HIS HET NAD A 405 44 HET EDO A 406 4 HET EDO A 407 4 HET EDO A 408 4 HET EDO A 409 4 HET EDO A 410 4 HET EDO A 411 4 HET EDO A 412 4 HET EDO A 413 4 HET EDO A 414 4 HET EDO A 415 4 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAD C21 H27 N7 O14 P2 FORMUL 3 EDO 10(C2 H6 O2) FORMUL 13 HOH *453(H2 O) HELIX 1 1 GLY A 11 ALA A 22 1 12 HELIX 2 2 ASP A 37 GLY A 47 1 11 HELIX 3 3 ASP A 75 SER A 81 1 7 HELIX 4 4 PRO A 91 PHE A 93 5 3 HELIX 5 5 ALA A 94 ALA A 103 1 10 HELIX 6 6 GLY A 120 GLY A 130 1 11 HELIX 7 7 ASP A 131 ALA A 135 5 5 HELIX 8 8 ASP A 179 GLY A 189 1 11 HELIX 9 9 HIS A 199 MET A 206 1 8 HELIX 10 10 PHE A 210 GLY A 221 1 12 HELIX 11 11 PHE A 234 ILE A 238 5 5 HELIX 12 12 ASP A 239 CYS A 264 1 26 HELIX 13 13 ASP A 274 TYR A 283 1 10 HELIX 14 14 ASP A 292 THR A 299 1 8 HELIX 15 15 ASN A 300 LYS A 304 5 5 HELIX 16 16 GLY A 333 GLY A 345 1 13 HELIX 17 17 ILE A 348 GLY A 363 1 16 HELIX 18 18 ASP A 376 THR A 380 5 5 HELIX 19 19 CYS A 382 GLY A 387 5 6 HELIX 20 20 THR A 390 GLY A 397 1 8 SHEET 1 A 8 VAL A 71 THR A 73 0 SHEET 2 A 8 VAL A 27 LEU A 32 1 N VAL A 31 O VAL A 71 SHEET 3 A 8 VAL A 3 CYS A 8 1 N VAL A 5 O GLU A 28 SHEET 4 A 8 VAL A 85 LEU A 88 1 O ILE A 87 N CYS A 8 SHEET 5 A 8 LEU A 111 GLY A 114 1 O VAL A 113 N VAL A 86 SHEET 6 A 8 SER A 137 PHE A 141 1 O MET A 139 N GLY A 114 SHEET 7 A 8 VAL A 165 ILE A 171 -1 O ILE A 171 N MET A 138 SHEET 8 A 8 VAL A 193 LEU A 196 1 O ARG A 195 N ALA A 168 SHEET 1 B 4 GLN A 62 SER A 67 0 SHEET 2 B 4 LEU A 51 ASN A 56 -1 N VAL A 55 O THR A 63 SHEET 3 B 4 LYS A 156 THR A 162 1 O VAL A 159 N ILE A 54 SHEET 4 B 4 TRP A 146 GLU A 152 -1 N ALA A 147 O LEU A 160 SHEET 1 C 2 VAL A 310 VAL A 313 0 SHEET 2 C 2 GLY A 316 PRO A 319 -1 O GLY A 316 N VAL A 313 CISPEP 1 LEU A 115 PRO A 116 0 -3.37 CISPEP 2 GLU A 191 PRO A 192 0 -3.65 SITE 1 AC1 19 GLY A 10 GLY A 11 ASN A 12 GLY A 13 SITE 2 AC1 19 PHE A 35 GLU A 38 PRO A 91 LEU A 144 SITE 3 AC1 19 ALA A 147 CYS A 148 HIS A 403 HOH A 425 SITE 4 AC1 19 HOH A 437 HOH A 441 HOH A 625 HOH A 633 SITE 5 AC1 19 HOH A 645 HOH A 672 HOH A 688 SITE 1 AC2 6 GLU A 142 MET A 206 TYR A 208 TRP A 278 SITE 2 AC2 6 HIS A 404 HOH A 846 SITE 1 AC3 2 ASP A 108 LYS A 132 SITE 1 AC4 2 GLU A 142 GLU A 202 SITE 1 AC5 1 HOH A 757 SITE 1 AC6 3 ALA A 312 HOH A 465 HOH A 814 SITE 1 AC7 4 LYS A 172 GLY A 173 HOH A 496 HOH A 676 SITE 1 AC8 2 SER A 182 GLN A 185 SITE 1 AC9 3 LEU A 181 GLN A 185 PHE A 194 CRYST1 99.816 99.816 126.513 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010018 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010018 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007904 0.00000