HEADER TRANSFERASE/DNA 04-MAR-08 3CFR TITLE STRUCTURE OF THE REPLICATING COMPLEX OF A POL ALPHA FAMILY DNA TITLE 2 POLYMERASE, TERNARY COMPLEX 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*DTP*DCP*DAP*DAP*DGP*DTP*DAP*DAP*DGP*DCP*DAP*DGP*DTP*DCP*DCP*DGP*DC COMPND 4 P*DG)-3'); COMPND 5 CHAIN: T; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: TEMPLATE STRAND; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'- COMPND 10 D(*DGP*DCP*DGP*DGP*DAP*DCP*DTP*DGP*DCP*DTP*DTP*DAP*(DOC))-3'); COMPND 11 CHAIN: P; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: PRIMER STRAND; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: DNA POLYMERASE; COMPND 16 CHAIN: A; COMPND 17 SYNONYM: GP43; COMPND 18 EC: 2.7.7.7; COMPND 19 ENGINEERED: YES; COMPND 20 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: SYNTHESIZED BY W.M. KECK FACILITY AT YALE UNIVERSITY; SOURCE 4 MOL_ID: 2; SOURCE 5 SYNTHETIC: YES; SOURCE 6 OTHER_DETAILS: SYNTHESIZED BY W.M. KECK FACILITY AT YALE UNIVERSITY; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: BACTERIOPHAGE RB69; SOURCE 9 GENE: 43; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA POLYMERASE, CATALYTIC COMPLEX, FIDELITY, TWO METAL ION MECHANISM, KEYWDS 2 TRANSFERASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.WANG,D.KLIMENKO,M.WANG,T.A.STEITZ,W.H.KONIGSBERG REVDAT 3 30-AUG-23 3CFR 1 REMARK REVDAT 2 20-OCT-21 3CFR 1 REMARK SEQADV LINK REVDAT 1 10-MAR-09 3CFR 0 JRNL AUTH D.KLIMENKO,M.WANG,T.A.STEITZ,W.H.KONIGSBERG,J.WANG JRNL TITL INSIGHTS INTO BASE SELECTIVITY FROM THE STRUCTURES OF AN JRNL TITL 2 RB69 DNA POLYMERASE TRIPLE MUTANT JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.WANG,A.K.SATTAR,C.C.WANG,J.D.KARAM,W.H.KONIGSBERG, REMARK 1 AUTH 2 T.A.STEITZ,M.C.FRANKLIN REMARK 1 TITL CRYSTAL STRUCTURE OF A POL ALPHA FAMILY REPLICATIVE DNA REMARK 1 TITL 2 POLYMERASE FROM BACTERIOPHAGE RB69 REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 89 1087 1997 REMARK 1 REFN ISSN 0092-8674 REMARK 1 PMID 9215631 REMARK 1 DOI 10.1016/S0092-8674(00)80296-2 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.C.FRANKLIN,J.WANG,T.A.STEITZ REMARK 1 TITL STRUCTURE OF THE REPLICATION COMPLEX OF A POL ALPHA FAMILY REMARK 1 TITL 2 DNA POLYMERASE REMARK 1 REF CELL(CAMBRIDGE,MASS.) V. 105 657 2001 REMARK 1 REFN ISSN 0092-8674 REMARK 1 PMID 11389835 REMARK 1 DOI 10.1016/S0092-8674(01)00367-1 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 43906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2340 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3112 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 165 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7343 REMARK 3 NUCLEIC ACID ATOMS : 629 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 629 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.91 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.41000 REMARK 3 B22 (A**2) : 0.61000 REMARK 3 B33 (A**2) : -0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.452 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.289 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.222 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.685 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.892 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8257 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11291 ; 1.337 ; 2.062 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 900 ; 5.832 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 372 ;35.215 ;24.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1342 ;17.407 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;19.194 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1195 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6091 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 4148 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5524 ; 0.303 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 669 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 9 ; 0.210 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 111 ; 0.163 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.191 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4628 ; 1.409 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7284 ; 2.246 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 4384 ; 1.350 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4007 ; 2.012 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CFR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000046721. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46306 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.18700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.70 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1IG9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7% PEG350 MONOMETHYL ETHER, 0.1M NA REMARK 280 CACODYLATE, 0.1 M CA2CL2, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.47900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.21500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 59.88450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.21500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.47900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 59.88450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, P, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 902 REMARK 465 PHE A 903 REMARK 465 HIS A 904 REMARK 465 HIS A 905 REMARK 465 HIS A 906 REMARK 465 HIS A 907 REMARK 465 HIS A 908 REMARK 465 HIS A 909 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 222 CG OD1 OD2 REMARK 470 ASP A 327 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2A TTP A 916 O HOH A 1019 2.11 REMARK 500 NH1 ARG A 313 O HOH A 1132 2.13 REMARK 500 O HOH A 1055 O HOH A 1479 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT T 1 C1' - O4' - C4' ANGL. DEV. = -9.1 DEGREES REMARK 500 DT T 1 C3' - C2' - C1' ANGL. DEV. = -5.3 DEGREES REMARK 500 DT T 1 O4' - C1' - N1 ANGL. DEV. = 7.2 DEGREES REMARK 500 DT T 1 C3' - O3' - P ANGL. DEV. = 8.4 DEGREES REMARK 500 DA T 3 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DA T 4 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG T 5 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 DT T 6 O4' - C1' - N1 ANGL. DEV. = 2.8 DEGREES REMARK 500 DA T 8 O4' - C1' - N9 ANGL. DEV. = 7.2 DEGREES REMARK 500 DC T 14 O4' - C1' - N1 ANGL. DEV. = 2.3 DEGREES REMARK 500 DC T 15 O4' - C1' - N1 ANGL. DEV. = 3.3 DEGREES REMARK 500 DC T 17 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG P 103 O4' - C1' - N9 ANGL. DEV. = 5.7 DEGREES REMARK 500 DG P 105 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DG P 105 C3' - O3' - P ANGL. DEV. = 9.9 DEGREES REMARK 500 DG P 106 C3' - C2' - C1' ANGL. DEV. = -6.2 DEGREES REMARK 500 DC P 108 O4' - C1' - N1 ANGL. DEV. = 4.2 DEGREES REMARK 500 DT P 109 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DC P 111 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT P 112 O4' - C1' - N1 ANGL. DEV. = 3.4 DEGREES REMARK 500 DOC P 115 O3' - P - OP2 ANGL. DEV. = 14.2 DEGREES REMARK 500 LEU A 197 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 LEU A 618 CA - CB - CG ANGL. DEV. = 16.0 DEGREES REMARK 500 TYR A 791 N - CA - C ANGL. DEV. = 17.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 211 -61.71 -94.89 REMARK 500 LYS A 251 90.14 93.72 REMARK 500 VAL A 252 93.98 57.81 REMARK 500 ILE A 253 106.37 70.67 REMARK 500 GLU A 254 -143.99 -88.16 REMARK 500 ASN A 255 -89.38 -109.53 REMARK 500 MET A 256 114.64 -170.04 REMARK 500 ASN A 316 73.55 -157.98 REMARK 500 ASN A 402 168.63 179.81 REMARK 500 SER A 414 70.08 28.63 REMARK 500 ASN A 424 42.79 72.75 REMARK 500 ASN A 507 73.58 69.45 REMARK 500 THR A 622 -64.09 67.70 REMARK 500 VAL A 636 -70.37 -88.39 REMARK 500 SER A 639 -65.48 -18.55 REMARK 500 LYS A 640 -28.72 137.67 REMARK 500 GLU A 686 -76.67 -103.88 REMARK 500 ASP A 792 82.98 66.88 REMARK 500 ILE A 858 -25.50 95.48 REMARK 500 LYS A 894 129.24 85.78 REMARK 500 ALA A 895 -110.97 82.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 506 ASN A 507 31.14 REMARK 500 ASP A 792 VAL A 793 -32.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 910 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD1 REMARK 620 2 LEU A 412 O 85.0 REMARK 620 3 ASP A 623 OD1 114.4 104.7 REMARK 620 4 TTP A 916 O2B 158.3 96.4 86.3 REMARK 620 5 TTP A 916 O1G 76.1 106.2 148.2 82.7 REMARK 620 6 HOH A1019 O 59.7 144.6 93.2 115.3 65.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 911 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 411 OD2 REMARK 620 2 ASP A 623 OD2 75.1 REMARK 620 3 TTP A 916 O2A 102.6 83.8 REMARK 620 4 HOH A1019 O 61.1 101.1 51.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 913 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 505 O REMARK 620 2 ASN A 507 OD1 89.5 REMARK 620 3 LYS A 531 O 155.8 70.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 910 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 911 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 912 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 913 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 914 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TTP A 916 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1IH7 RELATED DB: PDB REMARK 900 WILD TYPE RB69 DNA POLYMERASE APO FORM REMARK 900 RELATED ID: 1IG9 RELATED DB: PDB REMARK 900 WILD TYPE RB69 DNA POLYMERASE TERANRY COMPLEX REMARK 900 RELATED ID: 3CFO RELATED DB: PDB REMARK 900 TRIPLE MUTANT APO STRUCTURE REMARK 900 RELATED ID: 3CFP RELATED DB: PDB REMARK 900 STRUCTURE OF THE REPLICATING COMPLEX OF A POL ALPHA FAMILY DNA REMARK 900 POLYMERASE,TERNARY COMPLEX 1 DBREF 3CFR A 1 903 UNP Q38087 DPOL_BPR69 1 903 DBREF 3CFR T 1 18 PDB 3CFR 3CFR 1 18 DBREF 3CFR P 103 115 PDB 3CFR 3CFR 103 115 SEQADV 3CFR ALA A 561 UNP Q38087 LEU 561 ENGINEERED MUTATION SEQADV 3CFR GLY A 565 UNP Q38087 SER 565 ENGINEERED MUTATION SEQADV 3CFR ALA A 567 UNP Q38087 TYR 567 ENGINEERED MUTATION SEQADV 3CFR HIS A 904 UNP Q38087 EXPRESSION TAG SEQADV 3CFR HIS A 905 UNP Q38087 EXPRESSION TAG SEQADV 3CFR HIS A 906 UNP Q38087 EXPRESSION TAG SEQADV 3CFR HIS A 907 UNP Q38087 EXPRESSION TAG SEQADV 3CFR HIS A 908 UNP Q38087 EXPRESSION TAG SEQADV 3CFR HIS A 909 UNP Q38087 EXPRESSION TAG SEQRES 1 T 18 DT DC DA DA DG DT DA DA DG DC DA DG DT SEQRES 2 T 18 DC DC DG DC DG SEQRES 1 P 13 DG DC DG DG DA DC DT DG DC DT DT DA DOC SEQRES 1 A 909 MET LYS GLU PHE TYR LEU THR VAL GLU GLN ILE GLY ASP SEQRES 2 A 909 SER ILE PHE GLU ARG TYR ILE ASP SER ASN GLY ARG GLU SEQRES 3 A 909 ARG THR ARG GLU VAL GLU TYR LYS PRO SER LEU PHE ALA SEQRES 4 A 909 HIS CYS PRO GLU SER GLN ALA THR LYS TYR PHE ASP ILE SEQRES 5 A 909 TYR GLY LYS PRO CYS THR ARG LYS LEU PHE ALA ASN MET SEQRES 6 A 909 ARG ASP ALA SER GLN TRP ILE LYS ARG MET GLU ASP ILE SEQRES 7 A 909 GLY LEU GLU ALA LEU GLY MET ASP ASP PHE LYS LEU ALA SEQRES 8 A 909 TYR LEU SER ASP THR TYR ASN TYR GLU ILE LYS TYR ASP SEQRES 9 A 909 HIS THR LYS ILE ARG VAL ALA ASN PHE ASP ILE GLU VAL SEQRES 10 A 909 THR SER PRO ASP GLY PHE PRO GLU PRO SER GLN ALA LYS SEQRES 11 A 909 HIS PRO ILE ASP ALA ILE THR HIS TYR ASP SER ILE ASP SEQRES 12 A 909 ASP ARG PHE TYR VAL PHE ASP LEU LEU ASN SER PRO TYR SEQRES 13 A 909 GLY ASN VAL GLU GLU TRP SER ILE GLU ILE ALA ALA LYS SEQRES 14 A 909 LEU GLN GLU GLN GLY GLY ASP GLU VAL PRO SER GLU ILE SEQRES 15 A 909 ILE ASP LYS ILE ILE TYR MET PRO PHE ASP ASN GLU LYS SEQRES 16 A 909 GLU LEU LEU MET GLU TYR LEU ASN PHE TRP GLN GLN LYS SEQRES 17 A 909 THR PRO VAL ILE LEU THR GLY TRP ASN VAL GLU SER PHE SEQRES 18 A 909 ASP ILE PRO TYR VAL TYR ASN ARG ILE LYS ASN ILE PHE SEQRES 19 A 909 GLY GLU SER THR ALA LYS ARG LEU SER PRO HIS ARG LYS SEQRES 20 A 909 THR ARG VAL LYS VAL ILE GLU ASN MET TYR GLY SER ARG SEQRES 21 A 909 GLU ILE ILE THR LEU PHE GLY ILE SER VAL LEU ASP TYR SEQRES 22 A 909 ILE ASP LEU TYR LYS LYS PHE SER PHE THR ASN GLN PRO SEQRES 23 A 909 SER TYR SER LEU ASP TYR ILE SER GLU PHE GLU LEU ASN SEQRES 24 A 909 VAL GLY LYS LEU LYS TYR ASP GLY PRO ILE SER LYS LEU SEQRES 25 A 909 ARG GLU SER ASN HIS GLN ARG TYR ILE SER TYR ASN ILE SEQRES 26 A 909 ILE ASP VAL TYR ARG VAL LEU GLN ILE ASP ALA LYS ARG SEQRES 27 A 909 GLN PHE ILE ASN LEU SER LEU ASP MET GLY TYR TYR ALA SEQRES 28 A 909 LYS ILE GLN ILE GLN SER VAL PHE SER PRO ILE LYS THR SEQRES 29 A 909 TRP ASP ALA ILE ILE PHE ASN SER LEU LYS GLU GLN ASN SEQRES 30 A 909 LYS VAL ILE PRO GLN GLY ARG SER HIS PRO VAL GLN PRO SEQRES 31 A 909 TYR PRO GLY ALA PHE VAL LYS GLU PRO ILE PRO ASN ARG SEQRES 32 A 909 TYR LYS TYR VAL MET SER PHE ASP LEU THR SER LEU TYR SEQRES 33 A 909 PRO SER ILE ILE ARG GLN VAL ASN ILE SER PRO GLU THR SEQRES 34 A 909 ILE ALA GLY THR PHE LYS VAL ALA PRO LEU HIS ASP TYR SEQRES 35 A 909 ILE ASN ALA VAL ALA GLU ARG PRO SER ASP VAL TYR SER SEQRES 36 A 909 CYS SER PRO ASN GLY MET MET TYR TYR LYS ASP ARG ASP SEQRES 37 A 909 GLY VAL VAL PRO THR GLU ILE THR LYS VAL PHE ASN GLN SEQRES 38 A 909 ARG LYS GLU HIS LYS GLY TYR MET LEU ALA ALA GLN ARG SEQRES 39 A 909 ASN GLY GLU ILE ILE LYS GLU ALA LEU HIS ASN PRO ASN SEQRES 40 A 909 LEU SER VAL ASP GLU PRO LEU ASP VAL ASP TYR ARG PHE SEQRES 41 A 909 ASP PHE SER ASP GLU ILE LYS GLU LYS ILE LYS LYS LEU SEQRES 42 A 909 SER ALA LYS SER LEU ASN GLU MET LEU PHE ARG ALA GLN SEQRES 43 A 909 ARG THR GLU VAL ALA GLY MET THR ALA GLN ILE ASN ARG SEQRES 44 A 909 LYS ALA LEU ILE ASN GLY LEU ALA GLY ALA LEU GLY ASN SEQRES 45 A 909 VAL TRP PHE ARG TYR TYR ASP LEU ARG ASN ALA THR ALA SEQRES 46 A 909 ILE THR THR PHE GLY GLN MET ALA LEU GLN TRP ILE GLU SEQRES 47 A 909 ARG LYS VAL ASN GLU TYR LEU ASN GLU VAL CYS GLY THR SEQRES 48 A 909 GLU GLY GLU ALA PHE VAL LEU TYR GLY ASP THR ASP SER SEQRES 49 A 909 ILE TYR VAL SER ALA ASP LYS ILE ILE ASP LYS VAL GLY SEQRES 50 A 909 GLU SER LYS PHE ARG ASP THR ASN HIS TRP VAL ASP PHE SEQRES 51 A 909 LEU ASP LYS PHE ALA ARG GLU ARG MET GLU PRO ALA ILE SEQRES 52 A 909 ASP ARG GLY PHE ARG GLU MET CYS GLU TYR MET ASN ASN SEQRES 53 A 909 LYS GLN HIS LEU MET PHE MET ASP ARG GLU ALA ILE ALA SEQRES 54 A 909 GLY PRO PRO LEU GLY SER LYS GLY ILE GLY GLY PHE TRP SEQRES 55 A 909 THR GLY LYS LYS ARG TYR ALA LEU ASN VAL TRP ASP MET SEQRES 56 A 909 GLU GLY THR ARG TYR ALA GLU PRO LYS LEU LYS ILE MET SEQRES 57 A 909 GLY LEU GLU THR GLN LYS SER SER THR PRO LYS ALA VAL SEQRES 58 A 909 GLN LYS ALA LEU LYS GLU CYS ILE ARG ARG MET LEU GLN SEQRES 59 A 909 GLU GLY GLU GLU SER LEU GLN GLU TYR PHE LYS GLU PHE SEQRES 60 A 909 GLU LYS GLU PHE ARG GLN LEU ASN TYR ILE SER ILE ALA SEQRES 61 A 909 SER VAL SER SER ALA ASN ASN ILE ALA LYS TYR ASP VAL SEQRES 62 A 909 GLY GLY PHE PRO GLY PRO LYS CYS PRO PHE HIS ILE ARG SEQRES 63 A 909 GLY ILE LEU THR TYR ASN ARG ALA ILE LYS GLY ASN ILE SEQRES 64 A 909 ASP ALA PRO GLN VAL VAL GLU GLY GLU LYS VAL TYR VAL SEQRES 65 A 909 LEU PRO LEU ARG GLU GLY ASN PRO PHE GLY ASP LYS CYS SEQRES 66 A 909 ILE ALA TRP PRO SER GLY THR GLU ILE THR ASP LEU ILE SEQRES 67 A 909 LYS ASP ASP VAL LEU HIS TRP MET ASP TYR THR VAL LEU SEQRES 68 A 909 LEU GLU LYS THR PHE ILE LYS PRO LEU GLU GLY PHE THR SEQRES 69 A 909 SER ALA ALA LYS LEU ASP TYR GLU LYS LYS ALA SER LEU SEQRES 70 A 909 PHE ASP MET PHE ASP PHE HIS HIS HIS HIS HIS HIS MODRES 3CFR DOC P 115 DC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HET DOC P 115 18 HET CA A 910 1 HET CA A 911 1 HET CA A 912 1 HET CA A 913 1 HET CA A 914 1 HET CL A 915 1 HET TTP A 916 29 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM TTP THYMIDINE-5'-TRIPHOSPHATE FORMUL 2 DOC C9 H14 N3 O6 P FORMUL 4 CA 5(CA 2+) FORMUL 9 CL CL 1- FORMUL 10 TTP C10 H17 N2 O14 P3 FORMUL 11 HOH *629(H2 O) HELIX 1 1 ASN A 64 GLY A 79 1 16 HELIX 2 2 ASP A 87 TYR A 97 1 11 HELIX 3 3 ASP A 104 ILE A 108 5 5 HELIX 4 4 SER A 163 LYS A 169 1 7 HELIX 5 5 LEU A 170 GLY A 174 5 5 HELIX 6 6 PRO A 179 ASP A 184 1 6 HELIX 7 7 ASN A 193 LYS A 208 1 16 HELIX 8 8 PHE A 221 PHE A 234 1 14 HELIX 9 9 GLY A 235 LYS A 240 1 6 HELIX 10 10 ARG A 241 SER A 243 5 3 HELIX 11 11 ASP A 272 SER A 281 1 10 HELIX 12 12 SER A 289 ASN A 299 1 11 HELIX 13 13 PRO A 308 ASN A 316 1 9 HELIX 14 14 ASN A 316 GLN A 339 1 24 HELIX 15 15 GLN A 339 LYS A 352 1 14 HELIX 16 16 GLN A 354 PHE A 359 5 6 HELIX 17 17 SER A 360 GLU A 375 1 16 HELIX 18 18 SER A 414 ASN A 424 1 11 HELIX 19 19 PRO A 438 ASN A 444 1 7 HELIX 20 20 GLY A 469 LEU A 503 1 35 HELIX 21 21 SER A 523 LYS A 531 1 9 HELIX 22 22 SER A 534 LEU A 570 1 37 HELIX 23 23 ASP A 579 VAL A 608 1 30 HELIX 24 24 ALA A 629 GLY A 637 1 9 HELIX 25 25 ASP A 643 ARG A 658 1 16 HELIX 26 26 ARG A 658 ASN A 675 1 18 HELIX 27 27 LEU A 730 LYS A 734 5 5 HELIX 28 28 PRO A 738 GLU A 755 1 18 HELIX 29 29 GLY A 756 PHE A 771 1 16 HELIX 30 30 ARG A 772 LEU A 774 5 3 HELIX 31 31 ASN A 775 ALA A 780 5 6 HELIX 32 32 PRO A 802 ILE A 815 1 14 HELIX 33 33 THR A 855 MET A 866 1 12 HELIX 34 34 ASP A 867 PHE A 876 1 10 HELIX 35 35 PHE A 876 ALA A 887 1 12 SHEET 1 A 3 PHE A 4 ILE A 11 0 SHEET 2 A 3 SER A 14 ILE A 20 -1 O ARG A 18 N LEU A 6 SHEET 3 A 3 GLU A 26 VAL A 31 -1 O VAL A 31 N ILE A 15 SHEET 1 B 2 SER A 36 HIS A 40 0 SHEET 2 B 2 CYS A 57 LEU A 61 -1 O LYS A 60 N LEU A 37 SHEET 1 C 2 PHE A 50 ASP A 51 0 SHEET 2 C 2 LYS A 378 VAL A 379 1 O VAL A 379 N PHE A 50 SHEET 1 D 6 ILE A 186 PHE A 191 0 SHEET 2 D 6 ARG A 145 LEU A 151 1 N PHE A 146 O ILE A 187 SHEET 3 D 6 ILE A 133 ASP A 140 -1 N ILE A 136 O PHE A 149 SHEET 4 D 6 VAL A 110 VAL A 117 -1 N ASN A 112 O TYR A 139 SHEET 5 D 6 ILE A 212 THR A 214 1 O THR A 214 N ALA A 111 SHEET 6 D 6 SER A 269 VAL A 270 1 O SER A 269 N LEU A 213 SHEET 1 E 2 ASN A 153 SER A 154 0 SHEET 2 E 2 GLY A 157 ASN A 158 -1 O GLY A 157 N SER A 154 SHEET 1 F 2 THR A 248 ARG A 249 0 SHEET 2 F 2 THR A 264 LEU A 265 -1 O THR A 264 N ARG A 249 SHEET 1 G 7 ASN A 402 ARG A 403 0 SHEET 2 G 7 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 G 7 ARG A 707 MET A 715 -1 O ALA A 709 N PHE A 701 SHEET 4 G 7 MET A 683 ALA A 689 -1 N ILE A 688 O TRP A 713 SHEET 5 G 7 VAL A 407 LEU A 412 -1 N VAL A 407 O ALA A 689 SHEET 6 G 7 SER A 624 SER A 628 -1 O VAL A 627 N MET A 408 SHEET 7 G 7 VAL A 617 TYR A 619 -1 N LEU A 618 O TYR A 626 SHEET 1 H 4 ASN A 402 ARG A 403 0 SHEET 2 H 4 GLY A 700 GLY A 704 -1 O TRP A 702 N ASN A 402 SHEET 3 H 4 ARG A 707 MET A 715 -1 O ALA A 709 N PHE A 701 SHEET 4 H 4 THR A 718 MET A 728 -1 O MET A 728 N TYR A 708 SHEET 1 I 3 ILE A 430 THR A 433 0 SHEET 2 I 3 MET A 461 TYR A 463 -1 O MET A 462 N ALA A 431 SHEET 3 I 3 SER A 455 CYS A 456 -1 N SER A 455 O TYR A 463 SHEET 1 J 3 SER A 781 SER A 784 0 SHEET 2 J 3 LYS A 829 PRO A 834 -1 O VAL A 830 N SER A 783 SHEET 3 J 3 CYS A 845 PRO A 849 -1 O TRP A 848 N TYR A 831 LINK O3' DA P 114 P DOC P 115 1555 1555 1.59 LINK OD1 ASP A 411 CA CA A 910 1555 1555 2.59 LINK OD2 ASP A 411 CA CA A 911 1555 1555 2.65 LINK O LEU A 412 CA CA A 910 1555 1555 2.20 LINK O ASN A 505 CA CA A 913 1555 1555 2.35 LINK OD1 ASN A 507 CA CA A 913 1555 1555 2.07 LINK O LYS A 531 CA CA A 913 1555 1555 2.37 LINK OD1 ASP A 623 CA CA A 910 1555 1555 2.04 LINK OD2 ASP A 623 CA CA A 911 1555 1555 2.72 LINK CA CA A 910 O2B TTP A 916 1555 1555 2.25 LINK CA CA A 910 O1G TTP A 916 1555 1555 2.29 LINK CA CA A 910 O HOH A1019 1555 1555 2.27 LINK CA CA A 911 O2A TTP A 916 1555 1555 2.46 LINK CA CA A 911 O HOH A1019 1555 1555 2.36 CISPEP 1 VAL A 250 LYS A 251 0 -13.05 CISPEP 2 LYS A 251 VAL A 252 0 -7.58 CISPEP 3 VAL A 252 ILE A 253 0 -5.44 CISPEP 4 GLU A 254 ASN A 255 0 9.75 CISPEP 5 MET A 256 TYR A 257 0 -3.20 CISPEP 6 TYR A 257 GLY A 258 0 0.77 CISPEP 7 GLY A 637 GLU A 638 0 6.23 CISPEP 8 SER A 639 LYS A 640 0 -10.92 CISPEP 9 TYR A 791 ASP A 792 0 -0.07 CISPEP 10 VAL A 793 GLY A 794 0 -5.51 CISPEP 11 GLY A 794 GLY A 795 0 3.78 CISPEP 12 LYS A 893 LYS A 894 0 15.94 CISPEP 13 ALA A 895 SER A 896 0 14.37 CISPEP 14 SER A 896 LEU A 897 0 -3.18 CISPEP 15 PHE A 898 ASP A 899 0 -5.56 CISPEP 16 MET A 900 PHE A 901 0 -1.32 SITE 1 AC1 3 ASP A 411 LEU A 412 ASP A 623 SITE 1 AC2 3 ASP A 411 ASP A 623 SER A 624 SITE 1 AC3 3 ASP A 411 LYS A 486 GLU A 686 SITE 1 AC4 3 ASN A 505 ASN A 507 LYS A 531 SITE 1 AC5 2 CYS A 671 ASN A 676 SITE 1 AC6 12 ASP A 411 LEU A 412 SER A 414 LEU A 415 SITE 2 AC6 12 TYR A 416 ARG A 482 LYS A 560 ASN A 564 SITE 3 AC6 12 THR A 622 ASP A 623 DA T 4 DG T 5 CRYST1 74.958 119.769 130.430 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013341 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008349 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007667 0.00000