HEADER STRUCTURAL PROTEIN 10-MAR-08 3CHW TITLE COMPLEX OF DICTYOSTELIUM DISCOIDEUM ACTIN WITH PROFILIN AND THE LAST TITLE 2 POLY-PRO OF HUMAN VASP COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR ACTIN; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: PROFILIN-1; COMPND 6 CHAIN: P; COMPND 7 SYNONYM: PROFILIN I; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: VASODILATOR-STIMULATED PHOSPHOPROTEIN 16-RESIDUE PEPTIDE; COMPND 11 CHAIN: V; COMPND 12 FRAGMENT: LAST POLY-PRO REPEAT; COMPND 13 SYNONYM: VASP; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; SOURCE 3 ORGANISM_COMMON: SLIME MOLD; SOURCE 4 OTHER_DETAILS: CELL; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 GENE: PFN1; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PET29; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMAN VASP PROTEIN. KEYWDS TERNARY COMPLEX, PROFILIN, ACTIN, DICTYOSTELIUM DISCOIDEUM, VASP, KEYWDS 2 POLY-PROLINE, METHYL HISTIDINE, ATP-BINDING, CYTOSKELETON, KEYWDS 3 NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, STRUCTURAL PROTEIN, ACTIN- KEYWDS 4 BINDING, CELL JUNCTION, CELL PROJECTION, MEMBRANE, SH3-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR K.BAEK,R.DOMINGUEZ REVDAT 5 30-AUG-23 3CHW 1 REMARK LINK REVDAT 4 25-OCT-17 3CHW 1 REMARK REVDAT 3 13-JUL-11 3CHW 1 VERSN REVDAT 2 24-FEB-09 3CHW 1 VERSN REVDAT 1 19-AUG-08 3CHW 0 JRNL AUTH K.BAEK,X.LIU,F.FERRON,S.SHU,E.D.KORN,R.DOMINGUEZ JRNL TITL MODULATION OF ACTIN STRUCTURE AND FUNCTION BY JRNL TITL 2 PHOSPHORYLATION OF TYR-53 AND PROFILIN BINDING. JRNL REF PROC.NATL.ACAD.SCI.USA V. 105 11748 2008 JRNL REFN ISSN 0027-8424 JRNL PMID 18689676 JRNL DOI 10.1073/PNAS.0805852105 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.6 REMARK 3 NUMBER OF REFLECTIONS : 21648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1101 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1358 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.81 REMARK 3 BIN R VALUE (WORKING SET) : 0.1510 REMARK 3 BIN FREE R VALUE SET COUNT : 74 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3951 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 317 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 35.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : -0.17000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.455 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.254 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.493 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4152 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5653 ; 1.504 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 535 ; 5.818 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 172 ;37.267 ;24.070 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 705 ;16.747 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;16.612 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 627 ; 0.099 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3136 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2023 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2836 ; 0.306 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 311 ; 0.162 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.077 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 24 ; 0.178 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.169 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2651 ; 2.633 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4192 ; 3.830 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1700 ; 6.051 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1449 ; 8.158 ; 6.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 10 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 32 REMARK 3 RESIDUE RANGE : A 33 A 40 REMARK 3 RESIDUE RANGE : A 51 A 70 REMARK 3 RESIDUE RANGE : A 71 A 130 REMARK 3 RESIDUE RANGE : A 131 A 148 REMARK 3 RESIDUE RANGE : A 149 A 181 REMARK 3 RESIDUE RANGE : A 182 A 262 REMARK 3 RESIDUE RANGE : A 263 A 274 REMARK 3 RESIDUE RANGE : A 275 A 336 REMARK 3 RESIDUE RANGE : A 337 A 375 REMARK 3 ORIGIN FOR THE GROUP (A): 4.5960 -17.3270 -24.2060 REMARK 3 T TENSOR REMARK 3 T11: -0.1797 T22: -0.1095 REMARK 3 T33: -0.1867 T12: -0.0380 REMARK 3 T13: 0.0071 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: 0.8594 L22: 1.8905 REMARK 3 L33: 0.9816 L12: 0.3391 REMARK 3 L13: -0.3368 L23: -0.3011 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.0368 S13: -0.1140 REMARK 3 S21: -0.0143 S22: -0.0496 S23: 0.0843 REMARK 3 S31: 0.0973 S32: -0.0634 S33: 0.0591 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 5 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : P 1 P 15 REMARK 3 RESIDUE RANGE : P 16 P 38 REMARK 3 RESIDUE RANGE : P 39 P 92 REMARK 3 RESIDUE RANGE : P 93 P 116 REMARK 3 RESIDUE RANGE : P 117 P 139 REMARK 3 ORIGIN FOR THE GROUP (A): 17.9060 12.6550 -12.7830 REMARK 3 T TENSOR REMARK 3 T11: -0.1764 T22: -0.0999 REMARK 3 T33: -0.1987 T12: -0.0537 REMARK 3 T13: 0.0233 T23: -0.0687 REMARK 3 L TENSOR REMARK 3 L11: 2.9019 L22: 2.7549 REMARK 3 L33: 1.6930 L12: 0.7737 REMARK 3 L13: -0.0361 L23: -0.1428 REMARK 3 S TENSOR REMARK 3 S11: 0.2571 S12: -0.2293 S13: 0.2414 REMARK 3 S21: 0.2530 S22: -0.1676 S23: -0.0818 REMARK 3 S31: -0.0609 S32: -0.0121 S33: -0.0895 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : V 201 V 207 REMARK 3 RESIDUE RANGE : V 208 V 213 REMARK 3 ORIGIN FOR THE GROUP (A): 22.0260 26.6490 -21.1710 REMARK 3 T TENSOR REMARK 3 T11: -0.0002 T22: -0.0011 REMARK 3 T33: 0.0000 T12: -0.0023 REMARK 3 T13: -0.0001 T23: -0.0007 REMARK 3 L TENSOR REMARK 3 L11: 11.2220 L22: 12.7459 REMARK 3 L33: 2.2722 L12: -3.2931 REMARK 3 L13: -2.5482 L23: -3.7188 REMARK 3 S TENSOR REMARK 3 S11: 0.1098 S12: 0.5662 S13: 1.0343 REMARK 3 S21: -0.1249 S22: -0.1812 S23: 1.2973 REMARK 3 S31: -1.2987 S32: -1.5513 S33: 0.0714 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CHW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046795. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE BOUNCE SI (111) REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : RH-COATED SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21716 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : 0.11700 REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : 0.34900 REMARK 200 R SYM FOR SHELL (I) : 0.34900 REMARK 200 FOR SHELL : 15.80 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2PAV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, 25% PEG3350, PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.01850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.41100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.09150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 90.41100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.01850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.09150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, V REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 ASP A 4 REMARK 465 THR A 41 REMARK 465 GLY A 42 REMARK 465 VAL A 43 REMARK 465 MET A 44 REMARK 465 VAL A 45 REMARK 465 GLY A 46 REMARK 465 MET A 47 REMARK 465 GLY A 48 REMARK 465 GLN A 49 REMARK 465 LYS A 50 REMARK 465 GLY V 198 REMARK 465 ALA V 199 REMARK 465 GLY V 200 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 180 105.43 -178.35 REMARK 500 ALA A 181 -157.87 -150.65 REMARK 500 THR A 201 -30.86 -155.73 REMARK 500 SER A 234 35.81 -98.35 REMARK 500 SER A 271 156.30 -48.78 REMARK 500 ASP A 286 123.82 -25.53 REMARK 500 ASP P 26 -113.28 65.02 REMARK 500 LYS P 37 -152.51 -116.85 REMARK 500 VAL P 40 -16.71 -49.47 REMARK 500 THR P 105 -166.39 -115.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 402 O2B REMARK 620 2 ATP A 402 O2G 77.9 REMARK 620 3 HOH A 408 O 97.4 128.2 REMARK 620 4 HOH A 431 O 173.0 96.7 89.4 REMARK 620 5 HOH A 462 O 88.2 85.0 146.8 86.9 REMARK 620 6 HOH A 475 O 84.7 157.0 68.6 99.3 79.4 REMARK 620 7 HOH A 551 O 98.2 63.6 66.2 83.0 145.5 134.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2PAV RELATED DB: PDB REMARK 900 MODEL STRUCTURE FOR MOLECULAR REPLACEMENT. REMARK 900 RELATED ID: 2CI5 RELATED DB: PDB REMARK 900 RELATED ID: 2CIP RELATED DB: PDB DBREF 3CHW A 1 375 UNP P07830 ACT1_DICDI 2 376 DBREF 3CHW P 1 139 UNP P07737 PROF1_HUMAN 2 140 DBREF 3CHW V 198 213 UNP P50552 VASP_HUMAN 199 214 SEQRES 1 A 375 ASP GLY GLU ASP VAL GLN ALA LEU VAL ILE ASP ASN GLY SEQRES 2 A 375 SER GLY MET CYS LYS ALA GLY PHE ALA GLY ASP ASP ALA SEQRES 3 A 375 PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG PRO ARG SEQRES 4 A 375 HIS THR GLY VAL MET VAL GLY MET GLY GLN LYS ASP SER SEQRES 5 A 375 TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY ILE LEU SEQRES 6 A 375 THR LEU LYS TYR PRO ILE GLU HIC GLY ILE VAL THR ASN SEQRES 7 A 375 TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR PHE TYR SEQRES 8 A 375 ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO VAL LEU SEQRES 9 A 375 LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN ARG GLU SEQRES 10 A 375 LYS MET THR GLN ILE MET PHE GLU THR PHE ASN THR PRO SEQRES 11 A 375 ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER LEU TYR SEQRES 12 A 375 ALA SER GLY ARG THR THR GLY ILE VAL MET ASP SER GLY SEQRES 13 A 375 ASP GLY VAL SER HIS THR VAL PRO ILE TYR GLU GLY TYR SEQRES 14 A 375 ALA LEU PRO HIS ALA ILE LEU ARG LEU ASP LEU ALA GLY SEQRES 15 A 375 ARG ASP LEU THR ASP TYR MET MET LYS ILE LEU THR GLU SEQRES 16 A 375 ARG GLY TYR SER PHE THR THR THR ALA GLU ARG GLU ILE SEQRES 17 A 375 VAL ARG ASP ILE LYS GLU LYS LEU ALA TYR VAL ALA LEU SEQRES 18 A 375 ASP PHE GLU ALA GLU MET GLN THR ALA ALA SER SER SER SEQRES 19 A 375 ALA LEU GLU LYS SER TYR GLU LEU PRO ASP GLY GLN VAL SEQRES 20 A 375 ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO GLU ALA SEQRES 21 A 375 LEU PHE GLN PRO SER PHE LEU GLY MET GLU SER ALA GLY SEQRES 22 A 375 ILE HIS GLU THR THR TYR ASN SER ILE MET LYS CYS ASP SEQRES 23 A 375 VAL ASP ILE ARG LYS ASP LEU TYR GLY ASN VAL VAL LEU SEQRES 24 A 375 SER GLY GLY THR THR MET PHE PRO GLY ILE ALA ASP ARG SEQRES 25 A 375 MET ASN LYS GLU LEU THR ALA LEU ALA PRO SER THR MET SEQRES 26 A 375 LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS TYR SER SEQRES 27 A 375 VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SER THR SEQRES 28 A 375 PHE GLN GLN MET TRP ILE SER LYS GLU GLU TYR ASP GLU SEQRES 29 A 375 SER GLY PRO SER ILE VAL HIS ARG LYS CYS PHE SEQRES 1 P 139 ALA GLY TRP ASN ALA TYR ILE ASP ASN LEU MET ALA ASP SEQRES 2 P 139 GLY THR CYS GLN ASP ALA ALA ILE VAL GLY TYR LYS ASP SEQRES 3 P 139 SER PRO SER VAL TRP ALA ALA VAL PRO GLY LYS THR PHE SEQRES 4 P 139 VAL ASN ILE THR PRO ALA GLU VAL GLY VAL LEU VAL GLY SEQRES 5 P 139 LYS ASP ARG SER SER PHE TYR VAL ASN GLY LEU THR LEU SEQRES 6 P 139 GLY GLY GLN LYS CYS SER VAL ILE ARG ASP SER LEU LEU SEQRES 7 P 139 GLN ASP GLY GLU PHE SER MET ASP LEU ARG THR LYS SER SEQRES 8 P 139 THR GLY GLY ALA PRO THR PHE ASN VAL THR VAL THR LYS SEQRES 9 P 139 THR ASP LYS THR LEU VAL LEU LEU MET GLY LYS GLU GLY SEQRES 10 P 139 VAL HIS GLY GLY LEU ILE ASN LYS LYS CYS TYR GLU MET SEQRES 11 P 139 ALA SER HIS LEU ARG ARG SER GLN TYR SEQRES 1 V 16 GLY ALA GLY GLY GLY PRO PRO PRO ALA PRO PRO LEU PRO SEQRES 2 V 16 ALA ALA GLN MODRES 3CHW HIC A 73 HIS 4-METHYL-HISTIDINE HET HIC A 73 11 HET CA A 401 1 HET ATP A 402 31 HETNAM HIC 4-METHYL-HISTIDINE HETNAM CA CALCIUM ION HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE FORMUL 1 HIC C7 H11 N3 O2 FORMUL 4 CA CA 2+ FORMUL 5 ATP C10 H16 N5 O13 P3 FORMUL 6 HOH *317(H2 O) HELIX 1 1 GLY A 55 LYS A 61 1 7 HELIX 2 2 ASN A 78 ASN A 92 1 15 HELIX 3 3 ALA A 97 HIS A 101 5 5 HELIX 4 4 PRO A 112 THR A 126 1 15 HELIX 5 5 GLN A 137 SER A 145 1 9 HELIX 6 6 PRO A 172 ILE A 175 5 4 HELIX 7 7 ALA A 181 GLU A 195 1 15 HELIX 8 8 THR A 202 ALA A 217 1 16 HELIX 9 9 ASP A 222 SER A 233 1 12 HELIX 10 10 ASN A 252 ALA A 260 1 9 HELIX 11 11 LEU A 261 PHE A 262 5 2 HELIX 12 12 GLN A 263 GLY A 268 5 6 HELIX 13 13 GLY A 273 LYS A 284 1 12 HELIX 14 14 ILE A 289 GLY A 295 1 7 HELIX 15 15 GLY A 301 MET A 305 5 5 HELIX 16 16 GLY A 308 ALA A 319 1 12 HELIX 17 17 GLU A 334 LYS A 336 5 3 HELIX 18 18 TYR A 337 SER A 348 1 12 HELIX 19 19 LEU A 349 GLN A 354 5 6 HELIX 20 20 LYS A 359 GLY A 366 1 8 HELIX 21 21 SER A 368 CYS A 374 1 7 HELIX 22 22 TRP P 3 ALA P 12 1 10 HELIX 23 23 THR P 38 ILE P 42 5 5 HELIX 24 24 THR P 43 GLY P 52 1 10 HELIX 25 25 SER P 56 GLY P 62 1 7 HELIX 26 26 HIS P 119 ARG P 136 1 18 SHEET 1 A 6 ALA A 29 PRO A 32 0 SHEET 2 A 6 MET A 16 PHE A 21 -1 N CYS A 17 O PHE A 31 SHEET 3 A 6 LEU A 8 ASN A 12 -1 N ASP A 11 O LYS A 18 SHEET 4 A 6 VAL A 103 GLU A 107 1 O LEU A 104 N LEU A 8 SHEET 5 A 6 ALA A 131 ILE A 136 1 O TYR A 133 N LEU A 105 SHEET 6 A 6 ILE A 357 SER A 358 -1 O ILE A 357 N MET A 132 SHEET 1 B 3 TYR A 53 VAL A 54 0 SHEET 2 B 3 VAL A 35 PRO A 38 -1 N GLY A 36 O TYR A 53 SHEET 3 B 3 LEU A 65 LYS A 68 -1 O THR A 66 N ARG A 37 SHEET 1 C 2 ILE A 71 GLU A 72 0 SHEET 2 C 2 ILE A 75 VAL A 76 -1 O ILE A 75 N GLU A 72 SHEET 1 D 3 TYR A 169 ALA A 170 0 SHEET 2 D 3 SER A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 D 3 LEU A 176 LEU A 178 -1 O LEU A 178 N SER A 160 SHEET 1 E 5 TYR A 169 ALA A 170 0 SHEET 2 E 5 SER A 160 TYR A 166 -1 N TYR A 166 O TYR A 169 SHEET 3 E 5 GLY A 150 SER A 155 -1 N VAL A 152 O VAL A 163 SHEET 4 E 5 VAL A 297 SER A 300 1 O VAL A 298 N MET A 153 SHEET 5 E 5 ILE A 329 ILE A 330 1 O ILE A 330 N VAL A 297 SHEET 1 F 2 LYS A 238 GLU A 241 0 SHEET 2 F 2 VAL A 247 ILE A 250 -1 O ILE A 250 N LYS A 238 SHEET 1 G 7 SER P 29 ALA P 33 0 SHEET 2 G 7 CYS P 16 GLY P 23 -1 N ILE P 21 O TRP P 31 SHEET 3 G 7 THR P 108 GLY P 114 -1 O LEU P 109 N VAL P 22 SHEET 4 G 7 ASN P 99 LYS P 104 -1 N THR P 103 O VAL P 110 SHEET 5 G 7 SER P 84 THR P 89 -1 N LEU P 87 O VAL P 100 SHEET 6 G 7 GLN P 68 ASP P 75 -1 N SER P 71 O ARG P 88 SHEET 7 G 7 LEU P 63 LEU P 65 -1 N LEU P 63 O CYS P 70 LINK C GLU A 72 N HIC A 73 1555 1555 1.31 LINK C HIC A 73 N GLY A 74 1555 1555 1.31 LINK CA CA A 401 O2B ATP A 402 1555 1555 2.35 LINK CA CA A 401 O2G ATP A 402 1555 1555 2.34 LINK CA CA A 401 O HOH A 408 1555 1555 2.44 LINK CA CA A 401 O HOH A 431 1555 1555 2.29 LINK CA CA A 401 O HOH A 462 1555 1555 2.41 LINK CA CA A 401 O HOH A 475 1555 1555 2.37 LINK CA CA A 401 O HOH A 551 1555 1555 2.89 CISPEP 1 ALA P 1 GLY P 2 0 -6.26 SITE 1 AC2 18 GLY A 13 SER A 14 GLY A 15 MET A 16 SITE 2 AC2 18 LYS A 18 GLY A 156 ASP A 157 GLY A 158 SITE 3 AC2 18 GLY A 182 ARG A 210 LYS A 213 GLU A 214 SITE 4 AC2 18 GLY A 301 GLY A 302 THR A 303 MET A 305 SITE 5 AC2 18 PHE A 306 LYS A 336 CRYST1 38.037 76.183 180.822 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026290 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013126 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005530 0.00000