HEADER HYDROLASE 11-MAR-08 3CIH TITLE CRYSTAL STRUCTURE OF A PUTATIVE ALPHA-RHAMNOSIDASE FROM BACTEROIDES TITLE 2 THETAIOTAOMICRON COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ALPHA-RHAMNOSIDASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON VPI-5482; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 STRAIN: VPI-5482 / DSM 2079 / NCTC 10582 / E50; SOURCE 5 ATCC: 29148; SOURCE 6 GENE: BT_1001; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PSGX3(BC) KEYWDS STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE II, NYSGXRC, KEYWDS 2 12028B, (ALPHA/ALPHA)6 BARREL DOMAIN, BETA SANDWICH DOMAIN, KEYWDS 3 GLYCOSIDE, BIOSURFACTANS, PSI-2, NEW YORK SGX RESEARCH CENTER FOR KEYWDS 4 STRUCTURAL GENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.KUMARAN,S.K.BURLEY,S.SWAMINATHAN,NEW YORK SGX RESEARCH CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS (NYSGXRC) REVDAT 5 03-FEB-21 3CIH 1 AUTHOR JRNL REMARK SEQADV REVDAT 5 2 1 LINK REVDAT 4 09-JUN-09 3CIH 1 REVDAT REVDAT 3 24-FEB-09 3CIH 1 VERSN REVDAT 2 23-DEC-08 3CIH 1 AUTHOR KEYWDS REVDAT 1 01-APR-08 3CIH 0 JRNL AUTH D.KUMARAN,S.K.BURLEY,S.SWAMINATHAN JRNL TITL CRYSTAL STRUCTURE OF A PUTATIVE ALPHA-RHAMNOSIDASE FROM JRNL TITL 2 BACTEROIDES THETAIOTAOMICRON. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 61684.510 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 43710 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2190 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.48 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 77.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5595 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 310 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.017 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5814 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 384 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -7.32000 REMARK 3 B22 (A**2) : -7.32000 REMARK 3 B33 (A**2) : 14.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.27 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.32 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.37 REMARK 3 BSOL : 38.63 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : LIG.PAR REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : CARBOHYDRATE.TOP REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : LIG.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES LISTED AS MISSING IN REMARK REMARK 3 465 ARE DUE TO LACK OF ELECTRON DENSITY. RESIDUES WITH MISSING REMARK 3 ATOMS LISTED IN REMARK 470 ARE DUE TO LACK OF ELECTRON DENSITY REMARK 3 FOR SIDE CHAINS AND MODELED AS ALANINES. REMARK 4 REMARK 4 3CIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046814. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45225 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 12.00 REMARK 200 R MERGE (I) : 0.08600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.26300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 3350, 0.1M TRIS-HCL, 0.15M REMARK 280 AMMONIUM ACETATE, 0.2M NACL, PH 8.0, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 73.44750 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 99.42350 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 73.44750 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 99.42350 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 73.44750 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 99.42350 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 73.44750 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 99.42350 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 73.44750 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 99.42350 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 73.44750 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 99.42350 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 73.44750 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 99.42350 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 73.44750 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 73.44750 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 99.42350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 53250 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 ILE A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 LEU A 9 REMARK 465 SER A 10 REMARK 465 LEU A 11 REMARK 465 ALA A 12 REMARK 465 SER A 13 REMARK 465 SER A 14 REMARK 465 THR A 15 REMARK 465 PHE A 16 REMARK 465 ALA A 17 REMARK 465 GLU A 732 REMARK 465 GLY A 733 REMARK 465 HIS A 734 REMARK 465 HIS A 735 REMARK 465 HIS A 736 REMARK 465 HIS A 737 REMARK 465 HIS A 738 REMARK 465 HIS A 739 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 137 81.50 -164.07 REMARK 500 TRP A 162 -118.01 -135.19 REMARK 500 ALA A 185 143.94 -174.88 REMARK 500 ASN A 210 71.22 59.80 REMARK 500 SER A 261 -115.16 -75.09 REMARK 500 PHE A 273 163.24 174.31 REMARK 500 ARG A 327 -131.75 -109.59 REMARK 500 ASP A 337 -66.57 83.61 REMARK 500 LEU A 355 -72.84 -141.25 REMARK 500 VAL A 440 -71.04 71.83 REMARK 500 ASP A 444 18.16 56.31 REMARK 500 VAL A 545 -64.72 -130.59 REMARK 500 ASP A 549 4.98 -67.69 REMARK 500 LEU A 552 127.07 -30.75 REMARK 500 GLU A 572 45.09 -97.21 REMARK 500 PRO A 601 -2.57 -57.48 REMARK 500 GLU A 644 140.41 -36.71 REMARK 500 LYS A 679 -6.81 -147.85 REMARK 500 ARG A 730 104.52 -161.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 800 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 803 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: NYSGXRC-12028B RELATED DB: TARGETDB DBREF 3CIH A 4 731 UNP Q8A916 Q8A916_BACTN 2 729 SEQADV 3CIH MSE A 1 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH SER A 2 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH LEU A 3 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH GLU A 732 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH GLY A 733 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH HIS A 734 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH HIS A 735 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH HIS A 736 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH HIS A 737 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH HIS A 738 UNP Q8A916 EXPRESSION TAG SEQADV 3CIH HIS A 739 UNP Q8A916 EXPRESSION TAG SEQRES 1 A 739 MSE SER LEU ILE LEU LEU GLY ALA LEU SER LEU ALA SER SEQRES 2 A 739 SER THR PHE ALA GLN THR TRP ILE TRP TYR PRO GLY ASP SEQRES 3 A 739 TYR GLU ILE TRP LEU GLY ASN GLN MSE ASN ASN ARG ARG SEQRES 4 A 739 THR GLU ARG GLY ALA PHE PHE PRO PRO PHE TRP LYS THR SEQRES 5 A 739 ASP SER HIS TYR VAL VAL VAL GLU PHE SER LYS VAL LEU SEQRES 6 A 739 ASN LEU SER GLU PRO GLU GLU VAL PHE ILE ALA ALA GLU SEQRES 7 A 739 GLY THR TYR ASN VAL LYS LEU ASP GLY LYS LEU GLN PHE SEQRES 8 A 739 GLY MSE PRO GLU THR LEU LEU LEU PRO ALA GLY LYS HIS SEQRES 9 A 739 SER LEU ASN ILE LYS VAL TRP ASN GLN ALA THR PRO PRO SEQRES 10 A 739 THR ILE TYR VAL LYS GLY LYS THR VAL ASN SER ASP SER SEQRES 11 A 739 SER TRP ARG VAL THR TYR GLU ASP LYS GLU TRP ILE ASP SEQRES 12 A 739 GLU SER GLY LYS ALA SER ASP THR SER ALA THR ILE TYR SEQRES 13 A 739 MSE ASP ALA GLY CYS TRP ASN PHE ASP GLY ALA THR GLN SEQRES 14 A 739 ARG PRO SER GLN PHE SER LEU MSE ARG GLU PRO GLN GLN SEQRES 15 A 739 PRO VAL ALA LYS THR GLU GLN PRO GLU GLY GLY ILE LEU SEQRES 16 A 739 TYR ASP PHE GLY LYS GLU THR PHE GLY PHE ILE THR LEU SEQRES 17 A 739 LYS ASN LEU SER GLY LYS GLY LYS ILE ASP LEU TYR TYR SEQRES 18 A 739 GLY GLU SER PRO GLU GLU ALA LYS ASP LYS ALA TYR CYS SEQRES 19 A 739 GLU THR LEU ASP LYS LEU LEU LEU GLU PRO GLY GLN ILE SEQRES 20 A 739 THR ASP LEU ALA ILE ARG SER THR SER PRO LEU HIS HIS SEQRES 21 A 739 SER ASP ASN GLU TYR THR LEU GLU ASN SER LYS ALA PHE SEQRES 22 A 739 ARG TYR VAL TYR ILE THR HIS GLU PRO GLU VAL GLN ILE SEQRES 23 A 739 GLY GLU VAL SER MSE GLN TYR GLU TYR LEU PRO GLU GLU SEQRES 24 A 739 TYR ARG GLY ASN PHE ARG CYS ASN ASP GLU GLU LEU ASN SEQRES 25 A 739 CYS ILE TRP GLU VAL GLY ALA TYR THR MSE HIS LEU THR SEQRES 26 A 739 THR ARG GLU PHE PHE ILE ASP GLY ILE LYS ARG ASP ARG SEQRES 27 A 739 TRP VAL TRP SER GLY ASP ALA ILE GLN SER TYR LEU MSE SEQRES 28 A 739 ASN TYR TYR LEU PHE PHE ASP SER GLU SER VAL LYS ARG SEQRES 29 A 739 THR ILE TRP LEU LEU ARG GLY LYS ASP PRO VAL THR SER SEQRES 30 A 739 HIS SER ASN THR ILE MSE ASP TYR THR PHE TYR TRP PHE SEQRES 31 A 739 LEU SER VAL TYR ASP TYR TYR MSE TYR SER GLY ASP ARG SEQRES 32 A 739 HIS PHE VAL ASN GLN LEU TYR PRO ARG MSE GLN THR MSE SEQRES 33 A 739 MSE ASP TYR VAL LEU GLY ARG THR ASN LYS ASN GLY MSE SEQRES 34 A 739 VAL GLU GLY MSE SER GLY ASP TRP VAL PHE VAL ASP TRP SEQRES 35 A 739 ALA ASP GLY TYR LEU ASP LYS LYS GLY GLU LEU SER PHE SEQRES 36 A 739 GLU GLN VAL LEU PHE CYS ARG SER LEU GLU THR MSE ALA SEQRES 37 A 739 LEU CYS ALA ASP LEU VAL GLY ASP LYS ASP GLY GLN GLN SEQRES 38 A 739 LYS TYR GLU LYS LEU ALA SER ALA LEU LYS ALA LYS LEU SEQRES 39 A 739 GLU PRO THR PHE TRP ASN ASN GLN LYS GLN ALA PHE VAL SEQRES 40 A 739 HIS ASN CYS VAL ASP GLY ARG GLN SER ASP ALA VAL THR SEQRES 41 A 739 ARG TYR ALA ASN MSE PHE SER VAL PHE PHE ASP TYR LEU SEQRES 42 A 739 ASN ALA ASP LYS GLN GLN ALA ILE LYS GLN SER VAL LEU SEQRES 43 A 739 LEU ASN ASP GLU ILE LEU LYS ILE THR THR PRO TYR MSE SEQRES 44 A 739 ARG PHE TYR GLU LEU GLU ALA LEU CYS ALA LEU GLY GLU SEQRES 45 A 739 GLN GLU THR VAL MSE LYS GLU MSE LYS ALA TYR TRP GLY SEQRES 46 A 739 GLY MSE LEU LYS ALA GLY ALA THR SER PHE TRP GLU LYS SEQRES 47 A 739 TYR ASN PRO GLU GLU SER GLY THR GLN HIS LEU ALA MSE SEQRES 48 A 739 TYR GLY ARG PRO TYR GLY LYS SER LEU CYS HIS ALA TRP SEQRES 49 A 739 GLY ALA SER PRO ILE TYR LEU LEU GLY LYS TYR TYR LEU SEQRES 50 A 739 GLY VAL LYS PRO THR LYS GLU GLY TYR LYS GLU PHE ALA SEQRES 51 A 739 VAL SER PRO VAL LEU GLY GLY LEU LYS TRP MSE GLU GLY SEQRES 52 A 739 THR VAL PRO THR PRO ASN GLY ASP ILE HIS VAL TYR MSE SEQRES 53 A 739 ASP ASN LYS THR ILE LYS VAL LYS ALA THR GLU GLY LYS SEQRES 54 A 739 GLY TYR LEU THR ILE GLN SER ARG ARG GLN PRO LYS ALA SEQRES 55 A 739 ASN MSE GLY THR VAL GLU LYS VAL SER GLU GLY VAL TRP SEQRES 56 A 739 ARG LEU TRP ILE ASP SER PRO GLU GLU ARG ILE VAL THR SEQRES 57 A 739 TYR ARG LEU GLU GLY HIS HIS HIS HIS HIS HIS MODRES 3CIH MSE A 35 MET SELENOMETHIONINE MODRES 3CIH MSE A 93 MET SELENOMETHIONINE MODRES 3CIH MSE A 157 MET SELENOMETHIONINE MODRES 3CIH MSE A 177 MET SELENOMETHIONINE MODRES 3CIH MSE A 291 MET SELENOMETHIONINE MODRES 3CIH MSE A 322 MET SELENOMETHIONINE MODRES 3CIH MSE A 351 MET SELENOMETHIONINE MODRES 3CIH MSE A 383 MET SELENOMETHIONINE MODRES 3CIH MSE A 398 MET SELENOMETHIONINE MODRES 3CIH MSE A 413 MET SELENOMETHIONINE MODRES 3CIH MSE A 416 MET SELENOMETHIONINE MODRES 3CIH MSE A 417 MET SELENOMETHIONINE MODRES 3CIH MSE A 429 MET SELENOMETHIONINE MODRES 3CIH MSE A 433 MET SELENOMETHIONINE MODRES 3CIH MSE A 467 MET SELENOMETHIONINE MODRES 3CIH MSE A 525 MET SELENOMETHIONINE MODRES 3CIH MSE A 559 MET SELENOMETHIONINE MODRES 3CIH MSE A 577 MET SELENOMETHIONINE MODRES 3CIH MSE A 580 MET SELENOMETHIONINE MODRES 3CIH MSE A 587 MET SELENOMETHIONINE MODRES 3CIH MSE A 611 MET SELENOMETHIONINE MODRES 3CIH MSE A 661 MET SELENOMETHIONINE MODRES 3CIH MSE A 676 MET SELENOMETHIONINE MODRES 3CIH MSE A 704 MET SELENOMETHIONINE HET MSE A 35 8 HET MSE A 93 8 HET MSE A 157 8 HET MSE A 177 8 HET MSE A 291 8 HET MSE A 322 8 HET MSE A 351 8 HET MSE A 383 8 HET MSE A 398 8 HET MSE A 413 8 HET MSE A 416 8 HET MSE A 417 8 HET MSE A 429 8 HET MSE A 433 8 HET MSE A 467 8 HET MSE A 525 8 HET MSE A 559 8 HET MSE A 577 8 HET MSE A 580 8 HET MSE A 587 8 HET MSE A 611 8 HET MSE A 661 8 HET MSE A 676 8 HET MSE A 704 8 HET TRS A 800 8 HET EDO A 801 4 HET EDO A 802 4 HET EDO A 803 4 HETNAM MSE SELENOMETHIONINE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM EDO 1,2-ETHANEDIOL HETSYN TRS TRIS BUFFER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 24(C5 H11 N O2 SE) FORMUL 2 TRS C4 H12 N O3 1+ FORMUL 3 EDO 3(C2 H6 O2) FORMUL 6 HOH *384(H2 O) HELIX 1 1 GLY A 25 ASN A 37 1 13 HELIX 2 2 ARG A 170 PHE A 174 5 5 HELIX 3 3 SER A 224 ASP A 230 1 7 HELIX 4 4 ASP A 308 THR A 325 1 18 HELIX 5 5 TRP A 341 TYR A 354 1 14 HELIX 6 6 ASP A 358 GLY A 371 1 14 HELIX 7 7 HIS A 378 THR A 381 5 4 HELIX 8 8 ILE A 382 GLY A 401 1 20 HELIX 9 9 ASP A 402 GLY A 422 1 21 HELIX 10 10 SER A 454 GLY A 475 1 22 HELIX 11 11 ASP A 476 PHE A 498 1 23 HELIX 12 12 THR A 520 PHE A 530 1 11 HELIX 13 13 ASN A 534 VAL A 545 1 12 HELIX 14 14 THR A 556 LEU A 570 1 15 HELIX 15 15 GLU A 572 LYS A 589 1 18 HELIX 16 16 SER A 604 ALA A 610 5 7 HELIX 17 17 HIS A 622 ALA A 626 5 5 HELIX 18 18 SER A 627 TYR A 636 1 10 HELIX 19 19 LYS A 643 TYR A 646 5 4 SHEET 1 A 2 ILE A 21 TRP A 22 0 SHEET 2 A 2 GLY A 160 CYS A 161 -1 O GLY A 160 N TRP A 22 SHEET 1 B 2 THR A 40 GLU A 41 0 SHEET 2 B 2 ALA A 44 PHE A 45 -1 O ALA A 44 N GLU A 41 SHEET 1 C 6 LYS A 88 LEU A 89 0 SHEET 2 C 6 THR A 80 LEU A 85 -1 N LEU A 85 O LYS A 88 SHEET 3 C 6 GLY A 102 TRP A 111 -1 O TRP A 111 N THR A 80 SHEET 4 C 6 VAL A 58 LEU A 67 -1 N LEU A 67 O GLY A 102 SHEET 5 C 6 ARG A 133 THR A 135 -1 O THR A 135 N GLU A 60 SHEET 6 C 6 MSE A 157 ASP A 158 -1 O MSE A 157 N VAL A 134 SHEET 1 D 3 THR A 96 LEU A 99 0 SHEET 2 D 3 GLU A 71 GLU A 78 -1 N GLU A 71 O LEU A 99 SHEET 3 D 3 THR A 118 LYS A 122 -1 O TYR A 120 N ALA A 76 SHEET 1 E 8 MSE A 177 GLN A 181 0 SHEET 2 E 8 VAL A 284 TYR A 295 -1 O TYR A 293 N GLU A 179 SHEET 3 E 8 ILE A 194 GLY A 213 -1 N LYS A 209 O GLU A 288 SHEET 4 E 8 LYS A 271 HIS A 280 -1 O VAL A 276 N TYR A 196 SHEET 5 E 8 GLY A 215 GLY A 222 -1 N TYR A 220 O TYR A 277 SHEET 6 E 8 LEU A 237 GLU A 243 -1 O LEU A 240 N ILE A 217 SHEET 7 E 8 GLN A 246 ASP A 249 -1 O GLN A 246 N GLU A 243 SHEET 8 E 8 SER A 254 PRO A 257 -1 O SER A 256 N ILE A 247 SHEET 1 F 3 ALA A 185 GLU A 188 0 SHEET 2 F 3 ILE A 194 GLY A 213 -1 O ASP A 197 N ALA A 185 SHEET 3 F 3 GLU A 264 THR A 266 -1 O TYR A 265 N LEU A 208 SHEET 1 G 6 ASN A 303 CYS A 306 0 SHEET 2 G 6 TRP A 660 THR A 667 -1 O GLU A 662 N ARG A 305 SHEET 3 G 6 GLY A 670 ASP A 677 -1 O VAL A 674 N GLY A 663 SHEET 4 G 6 THR A 680 ALA A 685 -1 O LYS A 682 N TYR A 675 SHEET 5 G 6 ARG A 725 THR A 728 -1 O ARG A 725 N VAL A 683 SHEET 6 G 6 LYS A 701 ALA A 702 -1 N LYS A 701 O THR A 728 SHEET 1 H 3 GLU A 452 LEU A 453 0 SHEET 2 H 3 ASN A 509 VAL A 511 -1 O CYS A 510 N GLU A 452 SHEET 3 H 3 ARG A 514 GLN A 515 -1 O ARG A 514 N VAL A 511 SHEET 1 I 2 TRP A 499 ASN A 500 0 SHEET 2 I 2 ALA A 505 PHE A 506 -1 O ALA A 505 N ASN A 500 SHEET 1 J 5 VAL A 639 PRO A 641 0 SHEET 2 J 5 GLU A 648 VAL A 651 -1 O ALA A 650 N LYS A 640 SHEET 3 J 5 LYS A 689 GLN A 695 1 O LYS A 689 N PHE A 649 SHEET 4 J 5 VAL A 714 ILE A 719 -1 O TRP A 715 N ILE A 694 SHEET 5 J 5 VAL A 707 SER A 711 -1 N GLU A 708 O ARG A 716 LINK C GLN A 34 N MSE A 35 1555 1555 1.33 LINK C MSE A 35 N ASN A 36 1555 1555 1.33 LINK C GLY A 92 N MSE A 93 1555 1555 1.33 LINK C MSE A 93 N PRO A 94 1555 1555 1.34 LINK C TYR A 156 N MSE A 157 1555 1555 1.32 LINK C MSE A 157 N ASP A 158 1555 1555 1.32 LINK C LEU A 176 N MSE A 177 1555 1555 1.33 LINK C MSE A 177 N ARG A 178 1555 1555 1.33 LINK C SER A 290 N MSE A 291 1555 1555 1.33 LINK C MSE A 291 N GLN A 292 1555 1555 1.33 LINK C THR A 321 N MSE A 322 1555 1555 1.33 LINK C MSE A 322 N HIS A 323 1555 1555 1.33 LINK C LEU A 350 N MSE A 351 1555 1555 1.33 LINK C MSE A 351 N ASN A 352 1555 1555 1.32 LINK C ILE A 382 N MSE A 383 1555 1555 1.32 LINK C MSE A 383 N ASP A 384 1555 1555 1.33 LINK C TYR A 397 N MSE A 398 1555 1555 1.33 LINK C MSE A 398 N TYR A 399 1555 1555 1.33 LINK C ARG A 412 N MSE A 413 1555 1555 1.33 LINK C MSE A 413 N GLN A 414 1555 1555 1.33 LINK C THR A 415 N MSE A 416 1555 1555 1.33 LINK C MSE A 416 N MSE A 417 1555 1555 1.33 LINK C MSE A 417 N ASP A 418 1555 1555 1.33 LINK C GLY A 428 N MSE A 429 1555 1555 1.33 LINK C MSE A 429 N VAL A 430 1555 1555 1.33 LINK C GLY A 432 N MSE A 433 1555 1555 1.32 LINK C MSE A 433 N SER A 434 1555 1555 1.33 LINK C THR A 466 N MSE A 467 1555 1555 1.33 LINK C MSE A 467 N ALA A 468 1555 1555 1.33 LINK C ASN A 524 N MSE A 525 1555 1555 1.33 LINK C MSE A 525 N PHE A 526 1555 1555 1.33 LINK C TYR A 558 N MSE A 559 1555 1555 1.33 LINK C MSE A 559 N ARG A 560 1555 1555 1.33 LINK C VAL A 576 N MSE A 577 1555 1555 1.33 LINK C MSE A 577 N LYS A 578 1555 1555 1.33 LINK C GLU A 579 N MSE A 580 1555 1555 1.33 LINK C MSE A 580 N LYS A 581 1555 1555 1.33 LINK C GLY A 586 N MSE A 587 1555 1555 1.33 LINK C MSE A 587 N LEU A 588 1555 1555 1.33 LINK C ALA A 610 N MSE A 611 1555 1555 1.33 LINK C MSE A 611 N TYR A 612 1555 1555 1.33 LINK C TRP A 660 N MSE A 661 1555 1555 1.32 LINK C MSE A 661 N GLU A 662 1555 1555 1.32 LINK C TYR A 675 N MSE A 676 1555 1555 1.33 LINK C MSE A 676 N ASP A 677 1555 1555 1.33 LINK C ASN A 703 N MSE A 704 1555 1555 1.33 LINK C MSE A 704 N GLY A 705 1555 1555 1.33 CISPEP 1 ASP A 373 PRO A 374 0 1.07 SITE 1 AC1 11 ASP A 332 ARG A 336 TRP A 341 ASP A 344 SITE 2 AC1 11 TYR A 385 TRP A 442 GLU A 597 TYR A 612 SITE 3 AC1 11 HIS A 622 TRP A 624 HOH A 859 SITE 1 AC2 4 THR A 80 TRP A 111 ASN A 112 GLN A 113 SITE 1 AC3 6 ARG A 403 ASN A 500 LYS A 503 GLN A 515 SITE 2 AC3 6 SER A 516 ASP A 517 SITE 1 AC4 4 ILE A 346 ASP A 395 PHE A 530 HOH A1142 CRYST1 146.895 146.895 198.847 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006808 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005029 0.00000