HEADER UNKNOWN FUNCTION 15-MAR-08 3CKJ TITLE CRYSTAL STRUCTURE OF A MYCOBACTERIAL PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM PARATUBERCULOSIS; SOURCE 3 STRAIN: K-10 KEYWDS MYCOBACTERIA, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Z.MARLAND,J.ROSSJOHN REVDAT 6 21-FEB-24 3CKJ 1 REMARK REVDAT 5 25-OCT-17 3CKJ 1 REMARK REVDAT 4 13-JUL-11 3CKJ 1 VERSN REVDAT 3 24-FEB-09 3CKJ 1 VERSN REVDAT 2 18-NOV-08 3CKJ 1 JRNL REVDAT 1 29-JUL-08 3CKJ 0 JRNL AUTH Z.FULTON,A.MCALISTER,M.C.WILCE,R.BRAMMANANTH, JRNL AUTH 2 L.ZAKER-TABRIZI,M.A.PERUGINI,S.P.BOTTOMLEY,R.L.COPPEL, JRNL AUTH 3 P.K.CRELLIN,J.ROSSJOHN,T.BEDDOE JRNL TITL CRYSTAL STRUCTURE OF A UDP-GLUCOSE-SPECIFIC JRNL TITL 2 GLYCOSYLTRANSFERASE FROM A MYCOBACTERIUM SPECIES. JRNL REF J.BIOL.CHEM. V. 283 27881 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18667419 JRNL DOI 10.1074/JBC.M801853200 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 35916 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1158 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2616 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2244 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 102 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.412 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2384 ; 0.019 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3282 ; 1.568 ; 2.007 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 318 ; 5.571 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;33.923 ;22.967 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 362 ;13.170 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;13.089 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 386 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1812 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1164 ; 0.213 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1615 ; 0.308 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 146 ; 0.142 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 66 ; 0.218 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 14 ; 0.125 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1565 ; 0.959 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2473 ; 1.416 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 918 ; 2.360 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 800 ; 3.581 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 26 REMARK 3 ORIGIN FOR THE GROUP (A): 26.2099 7.3268 23.1954 REMARK 3 T TENSOR REMARK 3 T11: 0.9149 T22: 0.1209 REMARK 3 T33: 0.1588 T12: 0.3623 REMARK 3 T13: -0.0357 T23: 0.2217 REMARK 3 L TENSOR REMARK 3 L11: 15.0543 L22: 2.9704 REMARK 3 L33: 4.5971 L12: 1.9777 REMARK 3 L13: -2.4855 L23: 3.0422 REMARK 3 S TENSOR REMARK 3 S11: -0.5641 S12: -0.3296 S13: -0.1174 REMARK 3 S21: 1.0763 S22: 0.3848 S23: 0.2851 REMARK 3 S31: 0.9873 S32: 1.0152 S33: 0.1794 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): 9.6305 21.8245 28.4576 REMARK 3 T TENSOR REMARK 3 T11: 0.5267 T22: 0.1543 REMARK 3 T33: 0.1477 T12: -0.0245 REMARK 3 T13: 0.3229 T23: 0.1057 REMARK 3 L TENSOR REMARK 3 L11: 3.0931 L22: 4.6852 REMARK 3 L33: 4.0177 L12: -1.2890 REMARK 3 L13: 0.6082 L23: 0.2708 REMARK 3 S TENSOR REMARK 3 S11: -0.3836 S12: -0.5225 S13: -0.1760 REMARK 3 S21: 1.1378 S22: 0.1376 S23: 0.9268 REMARK 3 S31: 0.6617 S32: -0.1457 S33: 0.2460 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 120 REMARK 3 ORIGIN FOR THE GROUP (A): 6.0569 37.4445 20.7474 REMARK 3 T TENSOR REMARK 3 T11: 0.1836 T22: 0.0930 REMARK 3 T33: 0.3090 T12: 0.0623 REMARK 3 T13: 0.0964 T23: -0.0755 REMARK 3 L TENSOR REMARK 3 L11: 2.8476 L22: 6.0615 REMARK 3 L33: 4.0461 L12: 0.7334 REMARK 3 L13: -1.3513 L23: -0.7241 REMARK 3 S TENSOR REMARK 3 S11: -0.0422 S12: -0.4502 S13: 0.0171 REMARK 3 S21: 0.6398 S22: 0.0416 S23: 0.8800 REMARK 3 S31: -0.2176 S32: -0.3839 S33: 0.0007 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 121 A 143 REMARK 3 ORIGIN FOR THE GROUP (A): 12.1616 29.5981 23.5026 REMARK 3 T TENSOR REMARK 3 T11: 0.2429 T22: 0.0728 REMARK 3 T33: 0.1355 T12: 0.0207 REMARK 3 T13: 0.0982 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.5082 L22: 4.0881 REMARK 3 L33: 2.9066 L12: -1.1722 REMARK 3 L13: -0.4725 L23: -0.7114 REMARK 3 S TENSOR REMARK 3 S11: -0.2602 S12: -0.4616 S13: -0.0445 REMARK 3 S21: 0.7391 S22: 0.1161 S23: 0.5216 REMARK 3 S31: 0.1962 S32: -0.2209 S33: 0.1442 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 144 A 172 REMARK 3 ORIGIN FOR THE GROUP (A): 19.0797 16.5631 26.1864 REMARK 3 T TENSOR REMARK 3 T11: 0.6476 T22: 0.1681 REMARK 3 T33: 0.1955 T12: 0.1365 REMARK 3 T13: 0.0937 T23: 0.1207 REMARK 3 L TENSOR REMARK 3 L11: 4.1014 L22: 4.9046 REMARK 3 L33: 4.5377 L12: -0.4285 REMARK 3 L13: -1.7497 L23: -0.5079 REMARK 3 S TENSOR REMARK 3 S11: -0.3028 S12: -0.6080 S13: -0.3818 REMARK 3 S21: 1.0373 S22: 0.1655 S23: 0.2983 REMARK 3 S31: 0.7762 S32: 0.2628 S33: 0.1372 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 173 A 244 REMARK 3 ORIGIN FOR THE GROUP (A): 22.5374 24.4483 13.7173 REMARK 3 T TENSOR REMARK 3 T11: 0.1551 T22: 0.0534 REMARK 3 T33: 0.1199 T12: 0.0118 REMARK 3 T13: -0.0361 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 1.4323 L22: 3.0707 REMARK 3 L33: 3.5011 L12: -0.9842 REMARK 3 L13: -0.6685 L23: 1.3111 REMARK 3 S TENSOR REMARK 3 S11: -0.1261 S12: -0.2190 S13: -0.0814 REMARK 3 S21: 0.3875 S22: 0.0972 S23: 0.1236 REMARK 3 S31: 0.2838 S32: 0.1163 S33: 0.0289 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 245 A 261 REMARK 3 ORIGIN FOR THE GROUP (A): 25.8370 20.0710 20.6647 REMARK 3 T TENSOR REMARK 3 T11: 0.3976 T22: 0.1443 REMARK 3 T33: 0.0954 T12: 0.1597 REMARK 3 T13: -0.0604 T23: 0.0330 REMARK 3 L TENSOR REMARK 3 L11: 6.3477 L22: 7.9402 REMARK 3 L33: 4.0544 L12: 3.2681 REMARK 3 L13: -0.8668 L23: -0.1833 REMARK 3 S TENSOR REMARK 3 S11: -0.2791 S12: -0.4128 S13: -0.0277 REMARK 3 S21: 0.7836 S22: 0.2539 S23: -0.0493 REMARK 3 S31: 0.4959 S32: 0.5714 S33: 0.0252 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 262 A 268 REMARK 3 ORIGIN FOR THE GROUP (A): 5.9766 16.7813 9.8100 REMARK 3 T TENSOR REMARK 3 T11: 0.3724 T22: 0.2374 REMARK 3 T33: 0.6037 T12: -0.1331 REMARK 3 T13: 0.0966 T23: 0.0982 REMARK 3 L TENSOR REMARK 3 L11: 0.5972 L22: 5.2246 REMARK 3 L33: 24.1511 L12: -1.7664 REMARK 3 L13: 3.7977 L23: -11.2330 REMARK 3 S TENSOR REMARK 3 S11: -0.2919 S12: 0.3257 S13: -0.7052 REMARK 3 S21: 0.8259 S22: 0.0157 S23: 0.7357 REMARK 3 S31: 0.9558 S32: -0.9956 S33: 0.2762 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 269 A 315 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7335 28.1154 -2.9756 REMARK 3 T TENSOR REMARK 3 T11: 0.0865 T22: 0.0690 REMARK 3 T33: 0.1898 T12: 0.0083 REMARK 3 T13: -0.0472 T23: -0.0253 REMARK 3 L TENSOR REMARK 3 L11: 3.8072 L22: 2.6144 REMARK 3 L33: 4.1807 L12: -0.1301 REMARK 3 L13: 1.6792 L23: 0.8832 REMARK 3 S TENSOR REMARK 3 S11: 0.0333 S12: 0.1597 S13: -0.0951 REMARK 3 S21: -0.0709 S22: -0.1127 S23: 0.2814 REMARK 3 S31: -0.0866 S32: -0.1946 S33: 0.0794 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 316 A 329 REMARK 3 ORIGIN FOR THE GROUP (A): 18.4947 41.2903 19.3539 REMARK 3 T TENSOR REMARK 3 T11: 0.2620 T22: 0.0611 REMARK 3 T33: 0.2320 T12: 0.0025 REMARK 3 T13: -0.0357 T23: -0.0749 REMARK 3 L TENSOR REMARK 3 L11: 4.3242 L22: 6.9707 REMARK 3 L33: 9.1271 L12: -0.0995 REMARK 3 L13: 0.4990 L23: 3.1319 REMARK 3 S TENSOR REMARK 3 S11: -0.0821 S12: -0.5158 S13: 0.2809 REMARK 3 S21: 0.7160 S22: 0.0744 S23: 0.0359 REMARK 3 S31: -0.2338 S32: 0.1029 S33: 0.0077 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CKJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046887. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793, 0.9794, 0.9641, 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35916 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03000 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.50500 REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SNB REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M MONO-AMMONIUM DIHYDROGEN REMARK 280 PHOSPHATE, 0.1 M SODIUM CITRATE PH 5.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.15000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.30000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.07500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.30000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 78.22500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.30000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.30000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 26.07500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.30000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.30000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 78.22500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 52.15000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -105.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 LEU A 6 REMARK 465 VAL A 7 REMARK 465 ALA A 8 REMARK 465 GLY A 9 REMARK 465 GLU A 10 REMARK 465 LEU A 11 REMARK 465 ALA A 12 REMARK 465 GLY A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 174 REMARK 465 ASN A 175 REMARK 465 VAL A 176 REMARK 465 GLY A 177 REMARK 465 ASP A 178 REMARK 465 ALA A 179 REMARK 465 GLY A 180 REMARK 465 GLY A 181 REMARK 465 GLY A 182 REMARK 465 ALA A 183 REMARK 465 GLY A 184 REMARK 465 ALA A 185 REMARK 465 THR A 186 REMARK 465 GLY A 187 REMARK 465 GLY A 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 29 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 93 CG CD OE1 OE2 REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 223 CG CD OE1 OE2 REMARK 470 ARG A 266 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 170 O HOH A 424 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 15 N GLY A 15 CA 0.164 REMARK 500 THR A 19 C ARG A 20 N 0.140 REMARK 500 ARG A 20 C ARG A 20 O 0.135 REMARK 500 PRO A 72 CA PRO A 72 CB 0.125 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 28 24.47 -74.48 REMARK 500 SER A 71 -56.01 -21.55 REMARK 500 ASP A 90 -153.34 -87.24 REMARK 500 LEU A 110 76.06 -155.57 REMARK 500 ASP A 161 30.40 -140.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 333 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 334 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CKN RELATED DB: PDB REMARK 900 RELATED ID: 3CKO RELATED DB: PDB REMARK 900 RELATED ID: 3CKQ RELATED DB: PDB REMARK 900 RELATED ID: 3CKV RELATED DB: PDB DBREF 3CKJ A 1 329 UNP Q73WU1 Q73WU1_MYCPA 1 329 SEQRES 1 A 329 MET THR THR SER ASP LEU VAL ALA GLY GLU LEU ALA GLY SEQRES 2 A 329 ASP GLY LEU ARG ASP THR ARG PRO GLY ASP THR TRP LEU SEQRES 3 A 329 ALA ASP ARG SER TRP ASN ARG PRO GLY TRP THR VAL ALA SEQRES 4 A 329 GLU LEU GLU ALA ALA LYS ALA GLY ARG THR ILE SER VAL SEQRES 5 A 329 VAL LEU PRO ALA LEU ASP GLU GLU ASP THR ILE GLY SER SEQRES 6 A 329 VAL ILE ASP SER ILE SER PRO LEU VAL ASP GLY LEU VAL SEQRES 7 A 329 ASP GLU LEU ILE VAL LEU ASP SER GLY SER THR ASP ASP SEQRES 8 A 329 THR GLU ILE ARG ALA VAL ALA ALA GLY ALA ARG VAL VAL SEQRES 9 A 329 SER ARG GLU GLN ALA LEU PRO GLU VAL PRO ILE ARG PRO SEQRES 10 A 329 GLY LYS GLY GLU ALA LEU TRP ARG SER LEU ALA ALA SER SEQRES 11 A 329 ARG GLY ASP ILE VAL VAL PHE VAL ASP SER ASP LEU ILE SEQRES 12 A 329 ASN PRO HIS PRO MET PHE VAL PRO TRP LEU VAL GLY PRO SEQRES 13 A 329 LEU LEU THR GLY ASP GLY VAL HIS LEU VAL LYS SER PHE SEQRES 14 A 329 TYR ARG ARG PRO LEU ASN VAL GLY ASP ALA GLY GLY GLY SEQRES 15 A 329 ALA GLY ALA THR GLY GLY GLY ARG VAL THR GLU LEU VAL SEQRES 16 A 329 ALA ARG PRO LEU LEU ALA ALA LEU ARG PRO GLU LEU GLY SEQRES 17 A 329 CYS ILE LEU GLN PRO LEU GLY GLY GLU TYR ALA ALA THR SEQRES 18 A 329 ARG GLU LEU LEU THR SER VAL PRO PHE ALA PRO GLY TYR SEQRES 19 A 329 GLY VAL GLU ILE GLY LEU LEU VAL ASP THR PHE ASP ARG SEQRES 20 A 329 LEU GLY LEU ASP ALA ILE ALA GLN VAL ASN LEU GLY VAL SEQRES 21 A 329 ARG GLU HIS ARG ASN ARG PRO LEU ALA GLU LEU GLY ALA SEQRES 22 A 329 MET SER ARG GLN VAL ILE ALA THR LEU LEU SER ARG CYS SEQRES 23 A 329 GLY ILE PRO ASP SER GLY VAL GLY LEU THR GLN PHE VAL SEQRES 24 A 329 ALA ASP GLY PRO GLU GLY GLN SER TYR THR GLN HIS THR SEQRES 25 A 329 TRP PRO VAL SER LEU ALA ASP ARG PRO PRO MET GLN ALA SEQRES 26 A 329 ILE ARG PRO ARG HET PO4 A 330 5 HET CIT A 331 13 HET MRD A 332 8 HET MRD A 333 8 HET MRD A 334 8 HETNAM PO4 PHOSPHATE ION HETNAM CIT CITRIC ACID HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL FORMUL 2 PO4 O4 P 3- FORMUL 3 CIT C6 H8 O7 FORMUL 4 MRD 3(C6 H14 O2) FORMUL 7 HOH *102(H2 O) HELIX 1 1 THR A 37 ALA A 44 1 8 HELIX 2 2 THR A 62 SER A 71 1 10 HELIX 3 3 PRO A 72 VAL A 74 5 3 HELIX 4 4 ASP A 91 ALA A 99 1 9 HELIX 5 5 ARG A 106 LEU A 110 1 5 HELIX 6 6 GLY A 118 SER A 130 1 13 HELIX 7 7 MET A 148 THR A 159 1 12 HELIX 8 8 GLY A 189 VAL A 195 1 7 HELIX 9 9 VAL A 195 ARG A 204 1 10 HELIX 10 10 PRO A 205 ILE A 210 5 6 HELIX 11 11 ARG A 222 THR A 226 1 5 HELIX 12 12 PRO A 232 TYR A 234 5 3 HELIX 13 13 GLY A 235 GLY A 249 1 15 HELIX 14 14 PRO A 267 ALA A 269 5 3 HELIX 15 15 GLU A 270 CYS A 286 1 17 HELIX 16 16 PRO A 322 ILE A 326 5 5 SHEET 1 A 9 TRP A 31 ASN A 32 0 SHEET 2 A 9 THR A 24 TRP A 25 -1 N THR A 24 O ASN A 32 SHEET 3 A 9 ILE A 253 VAL A 260 -1 O GLN A 255 N TRP A 25 SHEET 4 A 9 LEU A 165 ARG A 171 1 N PHE A 169 O LEU A 258 SHEET 5 A 9 TYR A 218 THR A 221 -1 O ALA A 219 N VAL A 166 SHEET 6 A 9 ILE A 134 PHE A 137 -1 N PHE A 137 O TYR A 218 SHEET 7 A 9 ILE A 50 ALA A 56 1 N VAL A 53 O VAL A 136 SHEET 8 A 9 GLU A 80 ASP A 85 1 O ILE A 82 N VAL A 52 SHEET 9 A 9 ARG A 102 SER A 105 1 O ARG A 102 N VAL A 83 SHEET 1 B 2 LEU A 142 ILE A 143 0 SHEET 2 B 2 GLU A 262 HIS A 263 -1 O GLU A 262 N ILE A 143 SHEET 1 C 2 THR A 296 ALA A 300 0 SHEET 2 C 2 TYR A 308 THR A 312 -1 O HIS A 311 N GLN A 297 SITE 1 AC1 8 ARG A 17 PRO A 114 ARG A 116 TYR A 308 SITE 2 AC1 8 THR A 309 GLN A 310 ARG A 320 HOH A 404 SITE 1 AC2 10 GLY A 189 THR A 192 LEU A 214 GLY A 215 SITE 2 AC2 10 GLY A 216 ARG A 261 HIS A 263 HOH A 370 SITE 3 AC2 10 HOH A 399 HOH A 424 SITE 1 AC3 7 PRO A 55 LEU A 57 GLU A 59 LYS A 119 SITE 2 AC3 7 ASP A 139 SER A 140 ASP A 141 SITE 1 AC4 7 GLY A 189 ARG A 190 GLU A 193 LEU A 268 SITE 2 AC4 7 LEU A 271 GLY A 272 GLN A 297 SITE 1 AC5 5 TYR A 170 ARG A 172 GLY A 189 GLN A 212 SITE 2 AC5 5 HIS A 263 CRYST1 86.600 86.600 104.300 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011548 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011548 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009583 0.00000