data_3CKM # _entry.id 3CKM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3CKM RCSB RCSB046890 WWPDB D_1000046890 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2008-05-13 _pdbx_database_PDB_obs_spr.pdb_id 3CKM _pdbx_database_PDB_obs_spr.replace_pdb_id 2H4A _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 5KCN . unspecified PDB 5VAT . unspecified PDB 5VBG . unspecified # _pdbx_database_status.entry_id 3CKM _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-03-16 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Vijayalakshmi, J.' 1 ? 'Saper, M.A.' 2 ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structure of YraM, a protein essential for growth of Haemophilus influenzae.' Proteins 73 204 217 2008 PSFGEY US 0887-3585 0867 ? 18412262 10.1002/prot.22033 1 'Structural analyses of the Haemophilus influenzae peptidoglycan synthase activator LpoA suggest multiple conformations in solution.' 'J. Biol. Chem.' 292 17626 17642 2017 JBCHA3 US 1083-351X 0071 ? 28887305 10.1074/jbc.M117.804997 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Vijayalakshmi, J.' 1 primary 'Akerley, B.J.' 2 primary 'Saper, M.A.' 3 1 'Sathiyamoorthy, K.' 4 1 'Vijayalakshmi, J.' 5 1 'Tirupati, B.' 6 1 'Fan, L.' 7 1 'Saper, M.A.' 8 # _cell.entry_id 3CKM _cell.length_a 109.907 _cell.length_b 50.644 _cell.length_c 63.676 _cell.angle_alpha 90.00 _cell.angle_beta 106.73 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CKM _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'YRAM (HI1655)' 36225.055 1 ? ? 'C-terminal domain, UNP residues 256-573' ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn BETA-MERCAPTOETHANOL 78.133 1 ? ? ? ? 4 water nat water 18.015 353 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name LpoA # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTS(MSE)NSVQDIIAQAKQAGIKTLVGPLLKQNLDVILA DPAQIQG(MSE)DVLALNATPNSRAIPQLCYYGLSPEDEAESAANK(MSE)WNDGVRNPLVA(MSE)PQNDLGQRVGNAF NVRWQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASPTELAE(MSE)KGYLTNIVPNLAIYASSRASASATNTN TDFIAQ(MSE)NGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQL(MSE)RLYA(MSE)GADAWLLINQFNELRQVPGYRLS GLTGILSADTNCNVERD(MSE)TWYQYQDGAIVPVVDHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQAGIKTLVGPLLKQNLDVILADPAQ IQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANIRY YNLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLAIYASSRASASATNTNTDFIAQMNGVQFSDIPFFKD TNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDMTWYQYQDGAIVPVV DHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 VAL n 1 3 SER n 1 4 GLN n 1 5 ILE n 1 6 GLY n 1 7 LEU n 1 8 LEU n 1 9 LEU n 1 10 PRO n 1 11 LEU n 1 12 SER n 1 13 GLY n 1 14 ASP n 1 15 GLY n 1 16 GLN n 1 17 ILE n 1 18 LEU n 1 19 GLY n 1 20 THR n 1 21 THR n 1 22 ILE n 1 23 GLN n 1 24 SER n 1 25 GLY n 1 26 PHE n 1 27 ASN n 1 28 ASP n 1 29 ALA n 1 30 LYS n 1 31 GLY n 1 32 ASN n 1 33 SER n 1 34 THR n 1 35 ILE n 1 36 PRO n 1 37 VAL n 1 38 GLN n 1 39 VAL n 1 40 PHE n 1 41 ASP n 1 42 THR n 1 43 SER n 1 44 MSE n 1 45 ASN n 1 46 SER n 1 47 VAL n 1 48 GLN n 1 49 ASP n 1 50 ILE n 1 51 ILE n 1 52 ALA n 1 53 GLN n 1 54 ALA n 1 55 LYS n 1 56 GLN n 1 57 ALA n 1 58 GLY n 1 59 ILE n 1 60 LYS n 1 61 THR n 1 62 LEU n 1 63 VAL n 1 64 GLY n 1 65 PRO n 1 66 LEU n 1 67 LEU n 1 68 LYS n 1 69 GLN n 1 70 ASN n 1 71 LEU n 1 72 ASP n 1 73 VAL n 1 74 ILE n 1 75 LEU n 1 76 ALA n 1 77 ASP n 1 78 PRO n 1 79 ALA n 1 80 GLN n 1 81 ILE n 1 82 GLN n 1 83 GLY n 1 84 MSE n 1 85 ASP n 1 86 VAL n 1 87 LEU n 1 88 ALA n 1 89 LEU n 1 90 ASN n 1 91 ALA n 1 92 THR n 1 93 PRO n 1 94 ASN n 1 95 SER n 1 96 ARG n 1 97 ALA n 1 98 ILE n 1 99 PRO n 1 100 GLN n 1 101 LEU n 1 102 CYS n 1 103 TYR n 1 104 TYR n 1 105 GLY n 1 106 LEU n 1 107 SER n 1 108 PRO n 1 109 GLU n 1 110 ASP n 1 111 GLU n 1 112 ALA n 1 113 GLU n 1 114 SER n 1 115 ALA n 1 116 ALA n 1 117 ASN n 1 118 LYS n 1 119 MSE n 1 120 TRP n 1 121 ASN n 1 122 ASP n 1 123 GLY n 1 124 VAL n 1 125 ARG n 1 126 ASN n 1 127 PRO n 1 128 LEU n 1 129 VAL n 1 130 ALA n 1 131 MSE n 1 132 PRO n 1 133 GLN n 1 134 ASN n 1 135 ASP n 1 136 LEU n 1 137 GLY n 1 138 GLN n 1 139 ARG n 1 140 VAL n 1 141 GLY n 1 142 ASN n 1 143 ALA n 1 144 PHE n 1 145 ASN n 1 146 VAL n 1 147 ARG n 1 148 TRP n 1 149 GLN n 1 150 GLN n 1 151 LEU n 1 152 ALA n 1 153 GLY n 1 154 THR n 1 155 ASP n 1 156 ALA n 1 157 ASN n 1 158 ILE n 1 159 ARG n 1 160 TYR n 1 161 TYR n 1 162 ASN n 1 163 LEU n 1 164 PRO n 1 165 ALA n 1 166 ASP n 1 167 VAL n 1 168 THR n 1 169 TYR n 1 170 PHE n 1 171 VAL n 1 172 GLN n 1 173 GLU n 1 174 ASN n 1 175 ASN n 1 176 SER n 1 177 ASN n 1 178 THR n 1 179 THR n 1 180 ALA n 1 181 LEU n 1 182 TYR n 1 183 ALA n 1 184 VAL n 1 185 ALA n 1 186 SER n 1 187 PRO n 1 188 THR n 1 189 GLU n 1 190 LEU n 1 191 ALA n 1 192 GLU n 1 193 MSE n 1 194 LYS n 1 195 GLY n 1 196 TYR n 1 197 LEU n 1 198 THR n 1 199 ASN n 1 200 ILE n 1 201 VAL n 1 202 PRO n 1 203 ASN n 1 204 LEU n 1 205 ALA n 1 206 ILE n 1 207 TYR n 1 208 ALA n 1 209 SER n 1 210 SER n 1 211 ARG n 1 212 ALA n 1 213 SER n 1 214 ALA n 1 215 SER n 1 216 ALA n 1 217 THR n 1 218 ASN n 1 219 THR n 1 220 ASN n 1 221 THR n 1 222 ASP n 1 223 PHE n 1 224 ILE n 1 225 ALA n 1 226 GLN n 1 227 MSE n 1 228 ASN n 1 229 GLY n 1 230 VAL n 1 231 GLN n 1 232 PHE n 1 233 SER n 1 234 ASP n 1 235 ILE n 1 236 PRO n 1 237 PHE n 1 238 PHE n 1 239 LYS n 1 240 ASP n 1 241 THR n 1 242 ASN n 1 243 SER n 1 244 PRO n 1 245 GLN n 1 246 TYR n 1 247 GLN n 1 248 LYS n 1 249 LEU n 1 250 ALA n 1 251 LYS n 1 252 SER n 1 253 THR n 1 254 GLY n 1 255 GLY n 1 256 GLU n 1 257 TYR n 1 258 GLN n 1 259 LEU n 1 260 MSE n 1 261 ARG n 1 262 LEU n 1 263 TYR n 1 264 ALA n 1 265 MSE n 1 266 GLY n 1 267 ALA n 1 268 ASP n 1 269 ALA n 1 270 TRP n 1 271 LEU n 1 272 LEU n 1 273 ILE n 1 274 ASN n 1 275 GLN n 1 276 PHE n 1 277 ASN n 1 278 GLU n 1 279 LEU n 1 280 ARG n 1 281 GLN n 1 282 VAL n 1 283 PRO n 1 284 GLY n 1 285 TYR n 1 286 ARG n 1 287 LEU n 1 288 SER n 1 289 GLY n 1 290 LEU n 1 291 THR n 1 292 GLY n 1 293 ILE n 1 294 LEU n 1 295 SER n 1 296 ALA n 1 297 ASP n 1 298 THR n 1 299 ASN n 1 300 CYS n 1 301 ASN n 1 302 VAL n 1 303 GLU n 1 304 ARG n 1 305 ASP n 1 306 MSE n 1 307 THR n 1 308 TRP n 1 309 TYR n 1 310 GLN n 1 311 TYR n 1 312 GLN n 1 313 ASP n 1 314 GLY n 1 315 ALA n 1 316 ILE n 1 317 VAL n 1 318 PRO n 1 319 VAL n 1 320 VAL n 1 321 ASP n 1 322 HIS n 1 323 HIS n 1 324 HIS n 1 325 HIS n 1 326 HIS n 1 327 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Haemophilus _entity_src_gen.pdbx_gene_src_gene YraM _entity_src_gen.gene_src_species 'Haemophilus influenzae' _entity_src_gen.gene_src_strain 'Rd KW20' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus influenzae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 71421 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Origami (DE3) pLacI' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pETBlue-2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y1655_HAEIN _struct_ref.pdbx_db_accession P45299 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQAGIKTLVGPLLKQNLDVILADPAQI QGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANIRYY NLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLAIYASSRASASATNTNTDFIAQMNGVQFSDIPFFKDT NSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDMTWYQYQDGAIVPV ; _struct_ref.pdbx_align_begin 256 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3CKM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 319 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P45299 _struct_ref_seq.db_align_beg 256 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 573 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 256 _struct_ref_seq.pdbx_auth_seq_align_end 573 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CKM MET A 1 ? UNP P45299 ? ? 'EXPRESSION TAG' 255 1 1 3CKM VAL A 320 ? UNP P45299 ? ? 'EXPRESSION TAG' 574 2 1 3CKM ASP A 321 ? UNP P45299 ? ? 'EXPRESSION TAG' 575 3 1 3CKM HIS A 322 ? UNP P45299 ? ? 'EXPRESSION TAG' 576 4 1 3CKM HIS A 323 ? UNP P45299 ? ? 'EXPRESSION TAG' 577 5 1 3CKM HIS A 324 ? UNP P45299 ? ? 'EXPRESSION TAG' 578 6 1 3CKM HIS A 325 ? UNP P45299 ? ? 'EXPRESSION TAG' 579 7 1 3CKM HIS A 326 ? UNP P45299 ? ? 'EXPRESSION TAG' 580 8 1 3CKM HIS A 327 ? UNP P45299 ? ? 'EXPRESSION TAG' 581 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BME non-polymer . BETA-MERCAPTOETHANOL ? 'C2 H6 O S' 78.133 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3CKM _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.49 _exptl_crystal.description 'THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.pdbx_details '1.0M Li sulfate monohydrate, 2% W/V PEG 8000 and 0.05% BME, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 165 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-10-28 _diffrn_detector.details 'Si(111)Monochromator' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97857 1.0 2 0.97843 1.0 3 0.96321 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 5ID-B' _diffrn_source.pdbx_wavelength_list 0.97857,0.97843,0.96321 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 5ID-B # _reflns.entry_id 3CKM _reflns.d_resolution_high 1.350 _reflns.d_resolution_low 47.100 _reflns.number_obs 143557 _reflns.pdbx_scaling_rejects 3409 _reflns.pdbx_Rmerge_I_obs 0.044 _reflns.pdbx_netI_over_sigmaI 12.200 _reflns.pdbx_chi_squared 0.960 _reflns.pdbx_redundancy 3.140 _reflns.percent_possible_obs 99.400 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all 144362 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 14.73 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_Rrim_I_all 1.35 1.40 44554 44648 14350 0.428 2.8 ? 1.05 3.10 ? 14456 99.3 1 1 ? ? ? 1.40 1.45 44635 44712 14332 0.361 3.2 ? 1.03 3.11 ? 14402 99.5 2 1 ? ? ? 1.45 1.52 44619 44741 14354 0.276 3.9 ? 1.00 3.11 ? 14408 99.6 3 1 ? ? ? 1.52 1.60 44774 44933 14425 0.203 4.9 ? 0.97 3.10 ? 14452 99.8 4 1 ? ? ? 1.60 1.70 45164 45320 14425 0.152 6.1 ? 0.92 3.13 ? 14439 99.9 5 1 ? ? ? 1.70 1.83 45720 45960 14466 0.103 8.3 ? 0.86 3.16 ? 14481 99.9 6 1 ? ? ? 1.83 2.02 45766 46058 14398 0.070 11.7 ? 0.81 3.18 ? 14418 99.9 7 1 ? ? ? 2.02 2.31 45864 46279 14371 0.048 18.4 ? 0.89 3.19 ? 14399 99.8 8 1 ? ? ? 2.31 2.91 46513 47065 14441 0.038 24.0 ? 0.97 3.22 ? 14466 99.8 9 1 ? ? ? 2.91 47.10 43442 44744 13995 0.025 38.7 ? 1.13 3.10 ? 14441 96.9 10 1 ? ? ? # _refine.entry_id 3CKM _refine.ls_d_res_high 1.350 _refine.ls_d_res_low 38.950 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.390 _refine.ls_number_reflns_obs 73215 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. FRIEDEL PAIRS WERE AVERAGED FOR REFINEMENT. RESIDUES 346-359, 428 (SIDE CHAIN), 429, 430 HAVE NO INTERPRETABLE ELECTRON DENSITY. COORDINATES REPRESENT A HYPOTHETICAL MODEL. ; _refine.ls_R_factor_obs 0.160 _refine.ls_R_factor_R_work 0.157 _refine.ls_wR_factor_R_work 0.159 _refine.ls_R_factor_R_free 0.194 _refine.ls_wR_factor_R_free 0.196 _refine.ls_percent_reflns_R_free 9.800 _refine.ls_number_reflns_R_free 7201 _refine.B_iso_mean 14.197 _refine.aniso_B[1][1] 0.000 _refine.aniso_B[2][2] -0.020 _refine.aniso_B[3][3] 0.020 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.010 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.pdbx_overall_ESU_R 0.058 _refine.pdbx_overall_ESU_R_Free 0.056 _refine.overall_SU_ML 0.033 _refine.overall_SU_B 1.766 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2433 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 9 _refine_hist.number_atoms_solvent 353 _refine_hist.number_atoms_total 2795 _refine_hist.d_res_high 1.350 _refine_hist.d_res_low 38.950 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2503 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1609 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3421 1.563 1.958 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3960 1.636 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 326 5.310 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 119 36.779 26.050 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 400 11.622 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 14.455 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 386 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 2866 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 468 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1590 1.616 1.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 645 0.898 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2564 2.456 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 913 3.530 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 853 5.018 4.500 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 4112 1.598 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 354 7.731 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 4061 5.238 3.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_low _refine_ls_shell.d_res_high _refine_ls_shell.number_reflns_all _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free _refine_ls_shell.number_reflns_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.R_factor_all _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_obs 20 1.385 1.350 5438 97.977 4815 0.220 513 0.255 4815 . . . . 'X-RAY DIFFRACTION' . 20 1.423 1.385 5269 99.260 4727 0.206 503 0.246 4727 . . . . 'X-RAY DIFFRACTION' . 20 1.464 1.423 5127 99.415 4614 0.186 483 0.257 4614 . . . . 'X-RAY DIFFRACTION' . 20 1.509 1.464 5004 99.540 4477 0.169 504 0.217 4477 . . . . 'X-RAY DIFFRACTION' . 20 1.559 1.509 4815 99.626 4358 0.159 439 0.194 4358 . . . . 'X-RAY DIFFRACTION' . 20 1.613 1.559 4669 99.764 4169 0.141 489 0.176 4169 . . . . 'X-RAY DIFFRACTION' . 20 1.674 1.613 4546 99.868 4089 0.140 451 0.194 4089 . . . . 'X-RAY DIFFRACTION' . 20 1.742 1.674 4320 99.907 3905 0.134 411 0.189 3905 . . . . 'X-RAY DIFFRACTION' . 20 1.820 1.742 4205 100.000 3775 0.132 430 0.164 3775 . . . . 'X-RAY DIFFRACTION' . 20 1.908 1.820 3978 99.950 3598 0.132 378 0.182 3598 . . . . 'X-RAY DIFFRACTION' . 20 2.011 1.908 3798 100.000 3407 0.133 391 0.166 3407 . . . . 'X-RAY DIFFRACTION' . 20 2.133 2.011 3606 99.917 3250 0.127 353 0.175 3250 . . . . 'X-RAY DIFFRACTION' . 20 2.279 2.133 3388 99.941 3060 0.138 326 0.182 3060 . . . . 'X-RAY DIFFRACTION' . 20 2.461 2.279 3157 100.000 2836 0.142 321 0.182 2836 . . . . 'X-RAY DIFFRACTION' . 20 2.695 2.461 2912 100.000 2618 0.151 294 0.187 2618 . . . . 'X-RAY DIFFRACTION' . 20 3.012 2.695 2658 99.962 2377 0.164 280 0.208 2377 . . . . 'X-RAY DIFFRACTION' . 20 3.474 3.012 2331 100.000 2108 0.172 223 0.200 2108 . . . . 'X-RAY DIFFRACTION' . 20 4.246 3.474 2001 99.150 1782 0.159 202 0.172 1782 . . . . 'X-RAY DIFFRACTION' . 20 5.970 4.246 1550 96.968 1373 0.172 130 0.204 1373 . . . . 'X-RAY DIFFRACTION' . 20 38.954 5.970 894 84.564 676 0.243 80 0.288 676 . . . . 'X-RAY DIFFRACTION' . # _struct.entry_id 3CKM _struct.title 'LpoA (YraM) C-domain from Haemophilus influenzae, a regulator of PBP1A' _struct.pdbx_descriptor 'Uncharacterized protein HI1655' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CKM _struct_keywords.text 'YraM, periplasmic-binding protein, lipoprotein, unliganded, BIOSYNTHETIC PROTEIN, PBP1A, TRANSPEPTIDASE, PEPTIDOGLYCAN' _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 15 ? GLY A 31 ? GLY A 269 GLY A 285 1 ? 17 HELX_P HELX_P2 2 SER A 46 ? ALA A 57 ? SER A 300 ALA A 311 1 ? 12 HELX_P HELX_P3 3 LEU A 67 ? ASP A 77 ? LEU A 321 ASP A 331 1 ? 11 HELX_P HELX_P4 4 PRO A 78 ? GLN A 82 ? PRO A 332 GLN A 336 5 ? 5 HELX_P HELX_P5 5 SER A 107 ? ASP A 122 ? SER A 361 ASP A 376 1 ? 16 HELX_P HELX_P6 6 ASN A 134 ? GLY A 153 ? ASN A 388 GLY A 407 1 ? 20 HELX_P HELX_P7 7 ALA A 165 ? ASN A 174 ? ALA A 419 ASN A 428 1 ? 10 HELX_P HELX_P8 8 SER A 186 ? THR A 198 ? SER A 440 THR A 452 1 ? 13 HELX_P HELX_P9 9 SER A 210 ? SER A 213 ? SER A 464 SER A 467 5 ? 4 HELX_P HELX_P10 10 ALA A 214 ? THR A 219 ? ALA A 468 THR A 473 1 ? 6 HELX_P HELX_P11 11 ASN A 220 ? MSE A 227 ? ASN A 474 MSE A 481 1 ? 8 HELX_P HELX_P12 12 ILE A 235 ? ASP A 240 ? ILE A 489 ASP A 494 5 ? 6 HELX_P HELX_P13 13 SER A 243 ? THR A 253 ? SER A 497 THR A 507 1 ? 11 HELX_P HELX_P14 14 GLU A 256 ? GLN A 275 ? GLU A 510 GLN A 529 1 ? 20 HELX_P HELX_P15 15 GLN A 275 ? VAL A 282 ? GLN A 529 VAL A 536 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 102 SG ? ? ? 1_555 A CYS 300 SG ? ? A CYS 356 A CYS 554 1_555 ? ? ? ? ? ? ? 2.054 ? covale1 covale ? ? A SER 43 C ? ? ? 1_555 A MSE 44 N ? ? A SER 297 A MSE 298 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 44 C ? ? ? 1_555 A ASN 45 N ? ? A MSE 298 A ASN 299 1_555 ? ? ? ? ? ? ? 1.319 ? covale3 covale ? ? A GLY 83 C ? ? ? 1_555 A MSE 84 N ? ? A GLY 337 A MSE 338 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 84 C ? ? ? 1_555 A ASP 85 N ? ? A MSE 338 A ASP 339 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale ? ? A LYS 118 C ? ? ? 1_555 A MSE 119 N ? ? A LYS 372 A MSE 373 1_555 ? ? ? ? ? ? ? 1.335 ? covale6 covale ? ? A MSE 119 C ? ? ? 1_555 A TRP 120 N ? ? A MSE 373 A TRP 374 1_555 ? ? ? ? ? ? ? 1.317 ? covale7 covale ? ? A ALA 130 C ? ? ? 1_555 A MSE 131 N ? ? A ALA 384 A MSE 385 1_555 ? ? ? ? ? ? ? 1.331 ? covale8 covale ? ? A MSE 131 C ? ? ? 1_555 A PRO 132 N ? ? A MSE 385 A PRO 386 1_555 ? ? ? ? ? ? ? 1.335 ? covale9 covale ? ? A GLU 192 C ? ? ? 1_555 A MSE 193 N ? ? A GLU 446 A MSE 447 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A MSE 193 C ? ? ? 1_555 A LYS 194 N ? ? A MSE 447 A LYS 448 1_555 ? ? ? ? ? ? ? 1.320 ? covale11 covale ? ? A GLN 226 C ? ? ? 1_555 A MSE 227 N ? ? A GLN 480 A MSE 481 1_555 ? ? ? ? ? ? ? 1.333 ? covale12 covale ? ? A MSE 227 C ? ? ? 1_555 A ASN 228 N ? ? A MSE 481 A ASN 482 1_555 ? ? ? ? ? ? ? 1.330 ? covale13 covale ? ? A LEU 259 C ? ? ? 1_555 A MSE 260 N ? ? A LEU 513 A MSE 514 1_555 ? ? ? ? ? ? ? 1.322 ? covale14 covale ? ? A MSE 260 C ? ? ? 1_555 A ARG 261 N ? ? A MSE 514 A ARG 515 1_555 ? ? ? ? ? ? ? 1.335 ? covale15 covale ? ? A ALA 264 C ? ? ? 1_555 A MSE 265 N ? ? A ALA 518 A MSE 519 1_555 ? ? ? ? ? ? ? 1.320 ? covale16 covale ? ? A MSE 265 C ? ? ? 1_555 A GLY 266 N ? ? A MSE 519 A GLY 520 1_555 ? ? ? ? ? ? ? 1.330 ? covale17 covale ? ? A ASP 305 C A ? ? 1_555 A MSE 306 N ? ? A ASP 559 A MSE 560 1_555 ? ? ? ? ? ? ? 1.330 ? covale18 covale ? ? A ASP 305 C B ? ? 1_555 A MSE 306 N ? ? A ASP 559 A MSE 560 1_555 ? ? ? ? ? ? ? 1.320 ? covale19 covale ? ? A MSE 306 C ? ? ? 1_555 A THR 307 N ? ? A MSE 560 A THR 561 1_555 ? ? ? ? ? ? ? 1.317 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 64 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 318 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 65 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 319 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.52 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 7 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 37 ? ASP A 41 ? VAL A 291 ASP A 295 A 2 ILE A 5 ? LEU A 9 ? ILE A 259 LEU A 263 A 3 THR A 61 ? VAL A 63 ? THR A 315 VAL A 317 A 4 ASP A 85 ? ALA A 88 ? ASP A 339 ALA A 342 A 5 LEU A 101 ? TYR A 103 ? LEU A 355 TYR A 357 B 1 ASN A 157 ? TYR A 161 ? ASN A 411 TYR A 415 B 2 LEU A 128 ? PRO A 132 ? LEU A 382 PRO A 386 B 3 ALA A 180 ? ALA A 183 ? ALA A 434 ALA A 437 B 4 ALA A 205 ? ALA A 208 ? ALA A 459 ALA A 462 B 5 GLN A 231 ? ASP A 234 ? GLN A 485 ASP A 488 B 6 THR A 307 ? GLN A 312 ? THR A 561 GLN A 566 B 7 ALA A 315 ? PRO A 318 ? ALA A 569 PRO A 572 C 1 LEU A 287 ? GLY A 289 ? LEU A 541 GLY A 543 C 2 GLY A 292 ? ALA A 296 ? GLY A 546 ALA A 550 C 3 VAL A 302 ? ASP A 305 ? VAL A 556 ASP A 559 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 40 ? O PHE A 294 N LEU A 7 ? N LEU A 261 A 2 3 N LEU A 8 ? N LEU A 262 O VAL A 63 ? O VAL A 317 A 3 4 N LEU A 62 ? N LEU A 316 O ASP A 85 ? O ASP A 339 A 4 5 N VAL A 86 ? N VAL A 340 O CYS A 102 ? O CYS A 356 B 1 2 O ARG A 159 ? O ARG A 413 N VAL A 129 ? N VAL A 383 B 2 3 N ALA A 130 ? N ALA A 384 O TYR A 182 ? O TYR A 436 B 3 4 N LEU A 181 ? N LEU A 435 O TYR A 207 ? O TYR A 461 B 4 5 N ILE A 206 ? N ILE A 460 O GLN A 231 ? O GLN A 485 B 5 6 N PHE A 232 ? N PHE A 486 O TYR A 309 ? O TYR A 563 B 6 7 N GLN A 312 ? N GLN A 566 O ALA A 315 ? O ALA A 569 C 1 2 N LEU A 287 ? N LEU A 541 O LEU A 294 ? O LEU A 548 C 2 3 N SER A 295 ? N SER A 549 O GLU A 303 ? O GLU A 557 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE SO4 A 582' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE BME A 583' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 ALA A 214 ? ALA A 468 . ? 1_555 ? 2 AC1 10 SER A 215 ? SER A 469 . ? 1_555 ? 3 AC1 10 GLU A 256 ? GLU A 510 . ? 1_555 ? 4 AC1 10 TYR A 257 ? TYR A 511 . ? 1_555 ? 5 AC1 10 GLN A 258 ? GLN A 512 . ? 1_555 ? 6 AC1 10 HOH D . ? HOH A 606 . ? 1_555 ? 7 AC1 10 HOH D . ? HOH A 614 . ? 1_555 ? 8 AC1 10 HOH D . ? HOH A 623 . ? 1_555 ? 9 AC1 10 HOH D . ? HOH A 666 . ? 4_555 ? 10 AC1 10 HOH D . ? HOH A 749 . ? 1_555 ? 11 AC2 4 SER A 213 ? SER A 467 . ? 1_555 ? 12 AC2 4 PHE A 232 ? PHE A 486 . ? 1_555 ? 13 AC2 4 ASP A 234 ? ASP A 488 . ? 1_555 ? 14 AC2 4 PHE A 238 ? PHE A 492 . ? 1_555 ? # _atom_sites.entry_id 3CKM _atom_sites.fract_transf_matrix[1][1] 0.009099 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002735 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019746 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016399 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 255 ? ? ? A . n A 1 2 VAL 2 256 ? ? ? A . n A 1 3 SER 3 257 257 SER SER A . n A 1 4 GLN 4 258 258 GLN GLN A . n A 1 5 ILE 5 259 259 ILE ILE A . n A 1 6 GLY 6 260 260 GLY GLY A . n A 1 7 LEU 7 261 261 LEU LEU A . n A 1 8 LEU 8 262 262 LEU LEU A . n A 1 9 LEU 9 263 263 LEU LEU A . n A 1 10 PRO 10 264 264 PRO PRO A . n A 1 11 LEU 11 265 265 LEU LEU A . n A 1 12 SER 12 266 266 SER SER A . n A 1 13 GLY 13 267 267 GLY GLY A . n A 1 14 ASP 14 268 268 ASP ASP A . n A 1 15 GLY 15 269 269 GLY GLY A . n A 1 16 GLN 16 270 270 GLN GLN A . n A 1 17 ILE 17 271 271 ILE ILE A . n A 1 18 LEU 18 272 272 LEU LEU A . n A 1 19 GLY 19 273 273 GLY GLY A . n A 1 20 THR 20 274 274 THR THR A . n A 1 21 THR 21 275 275 THR THR A . n A 1 22 ILE 22 276 276 ILE ILE A . n A 1 23 GLN 23 277 277 GLN GLN A . n A 1 24 SER 24 278 278 SER SER A . n A 1 25 GLY 25 279 279 GLY GLY A . n A 1 26 PHE 26 280 280 PHE PHE A . n A 1 27 ASN 27 281 281 ASN ASN A . n A 1 28 ASP 28 282 282 ASP ASP A . n A 1 29 ALA 29 283 283 ALA ALA A . n A 1 30 LYS 30 284 284 LYS LYS A . n A 1 31 GLY 31 285 285 GLY GLY A . n A 1 32 ASN 32 286 286 ASN ASN A . n A 1 33 SER 33 287 287 SER SER A . n A 1 34 THR 34 288 288 THR THR A . n A 1 35 ILE 35 289 289 ILE ILE A . n A 1 36 PRO 36 290 290 PRO PRO A . n A 1 37 VAL 37 291 291 VAL VAL A . n A 1 38 GLN 38 292 292 GLN GLN A . n A 1 39 VAL 39 293 293 VAL VAL A . n A 1 40 PHE 40 294 294 PHE PHE A . n A 1 41 ASP 41 295 295 ASP ASP A . n A 1 42 THR 42 296 296 THR THR A . n A 1 43 SER 43 297 297 SER SER A . n A 1 44 MSE 44 298 298 MSE MSE A . n A 1 45 ASN 45 299 299 ASN ASN A . n A 1 46 SER 46 300 300 SER SER A . n A 1 47 VAL 47 301 301 VAL VAL A . n A 1 48 GLN 48 302 302 GLN GLN A . n A 1 49 ASP 49 303 303 ASP ASP A . n A 1 50 ILE 50 304 304 ILE ILE A . n A 1 51 ILE 51 305 305 ILE ILE A . n A 1 52 ALA 52 306 306 ALA ALA A . n A 1 53 GLN 53 307 307 GLN GLN A . n A 1 54 ALA 54 308 308 ALA ALA A . n A 1 55 LYS 55 309 309 LYS LYS A . n A 1 56 GLN 56 310 310 GLN GLN A . n A 1 57 ALA 57 311 311 ALA ALA A . n A 1 58 GLY 58 312 312 GLY GLY A . n A 1 59 ILE 59 313 313 ILE ILE A . n A 1 60 LYS 60 314 314 LYS LYS A . n A 1 61 THR 61 315 315 THR THR A . n A 1 62 LEU 62 316 316 LEU LEU A . n A 1 63 VAL 63 317 317 VAL VAL A . n A 1 64 GLY 64 318 318 GLY GLY A . n A 1 65 PRO 65 319 319 PRO PRO A . n A 1 66 LEU 66 320 320 LEU LEU A . n A 1 67 LEU 67 321 321 LEU LEU A . n A 1 68 LYS 68 322 322 LYS LYS A . n A 1 69 GLN 69 323 323 GLN GLN A . n A 1 70 ASN 70 324 324 ASN ASN A . n A 1 71 LEU 71 325 325 LEU LEU A . n A 1 72 ASP 72 326 326 ASP ASP A . n A 1 73 VAL 73 327 327 VAL VAL A . n A 1 74 ILE 74 328 328 ILE ILE A . n A 1 75 LEU 75 329 329 LEU LEU A . n A 1 76 ALA 76 330 330 ALA ALA A . n A 1 77 ASP 77 331 331 ASP ASP A . n A 1 78 PRO 78 332 332 PRO PRO A . n A 1 79 ALA 79 333 333 ALA ALA A . n A 1 80 GLN 80 334 334 GLN GLN A . n A 1 81 ILE 81 335 335 ILE ILE A . n A 1 82 GLN 82 336 336 GLN GLN A . n A 1 83 GLY 83 337 337 GLY GLY A . n A 1 84 MSE 84 338 338 MSE MSE A . n A 1 85 ASP 85 339 339 ASP ASP A . n A 1 86 VAL 86 340 340 VAL VAL A . n A 1 87 LEU 87 341 341 LEU LEU A . n A 1 88 ALA 88 342 342 ALA ALA A . n A 1 89 LEU 89 343 343 LEU LEU A . n A 1 90 ASN 90 344 344 ASN ASN A . n A 1 91 ALA 91 345 345 ALA ALA A . n A 1 92 THR 92 346 346 THR THR A . n A 1 93 PRO 93 347 347 PRO PRO A . n A 1 94 ASN 94 348 348 ASN ASN A . n A 1 95 SER 95 349 349 SER SER A . n A 1 96 ARG 96 350 350 ARG ARG A . n A 1 97 ALA 97 351 351 ALA ALA A . n A 1 98 ILE 98 352 352 ILE ILE A . n A 1 99 PRO 99 353 353 PRO PRO A . n A 1 100 GLN 100 354 354 GLN GLN A . n A 1 101 LEU 101 355 355 LEU LEU A . n A 1 102 CYS 102 356 356 CYS CYS A . n A 1 103 TYR 103 357 357 TYR TYR A . n A 1 104 TYR 104 358 358 TYR TYR A . n A 1 105 GLY 105 359 359 GLY GLY A . n A 1 106 LEU 106 360 360 LEU LEU A . n A 1 107 SER 107 361 361 SER SER A . n A 1 108 PRO 108 362 362 PRO PRO A . n A 1 109 GLU 109 363 363 GLU GLU A . n A 1 110 ASP 110 364 364 ASP ASP A . n A 1 111 GLU 111 365 365 GLU GLU A . n A 1 112 ALA 112 366 366 ALA ALA A . n A 1 113 GLU 113 367 367 GLU GLU A . n A 1 114 SER 114 368 368 SER SER A . n A 1 115 ALA 115 369 369 ALA ALA A . n A 1 116 ALA 116 370 370 ALA ALA A . n A 1 117 ASN 117 371 371 ASN ASN A . n A 1 118 LYS 118 372 372 LYS LYS A . n A 1 119 MSE 119 373 373 MSE MSE A . n A 1 120 TRP 120 374 374 TRP TRP A . n A 1 121 ASN 121 375 375 ASN ASN A . n A 1 122 ASP 122 376 376 ASP ASP A . n A 1 123 GLY 123 377 377 GLY GLY A . n A 1 124 VAL 124 378 378 VAL VAL A . n A 1 125 ARG 125 379 379 ARG ARG A . n A 1 126 ASN 126 380 380 ASN ASN A . n A 1 127 PRO 127 381 381 PRO PRO A . n A 1 128 LEU 128 382 382 LEU LEU A . n A 1 129 VAL 129 383 383 VAL VAL A . n A 1 130 ALA 130 384 384 ALA ALA A . n A 1 131 MSE 131 385 385 MSE MSE A . n A 1 132 PRO 132 386 386 PRO PRO A . n A 1 133 GLN 133 387 387 GLN GLN A . n A 1 134 ASN 134 388 388 ASN ASN A . n A 1 135 ASP 135 389 389 ASP ASP A . n A 1 136 LEU 136 390 390 LEU LEU A . n A 1 137 GLY 137 391 391 GLY GLY A . n A 1 138 GLN 138 392 392 GLN GLN A . n A 1 139 ARG 139 393 393 ARG ARG A . n A 1 140 VAL 140 394 394 VAL VAL A . n A 1 141 GLY 141 395 395 GLY GLY A . n A 1 142 ASN 142 396 396 ASN ASN A . n A 1 143 ALA 143 397 397 ALA ALA A . n A 1 144 PHE 144 398 398 PHE PHE A . n A 1 145 ASN 145 399 399 ASN ASN A . n A 1 146 VAL 146 400 400 VAL VAL A . n A 1 147 ARG 147 401 401 ARG ARG A . n A 1 148 TRP 148 402 402 TRP TRP A . n A 1 149 GLN 149 403 403 GLN GLN A . n A 1 150 GLN 150 404 404 GLN GLN A . n A 1 151 LEU 151 405 405 LEU LEU A . n A 1 152 ALA 152 406 406 ALA ALA A . n A 1 153 GLY 153 407 407 GLY GLY A . n A 1 154 THR 154 408 408 THR THR A . n A 1 155 ASP 155 409 409 ASP ASP A . n A 1 156 ALA 156 410 410 ALA ALA A . n A 1 157 ASN 157 411 411 ASN ASN A . n A 1 158 ILE 158 412 412 ILE ILE A . n A 1 159 ARG 159 413 413 ARG ARG A . n A 1 160 TYR 160 414 414 TYR TYR A . n A 1 161 TYR 161 415 415 TYR TYR A . n A 1 162 ASN 162 416 416 ASN ASN A . n A 1 163 LEU 163 417 417 LEU LEU A . n A 1 164 PRO 164 418 418 PRO PRO A . n A 1 165 ALA 165 419 419 ALA ALA A . n A 1 166 ASP 166 420 420 ASP ASP A . n A 1 167 VAL 167 421 421 VAL VAL A . n A 1 168 THR 168 422 422 THR THR A . n A 1 169 TYR 169 423 423 TYR TYR A . n A 1 170 PHE 170 424 424 PHE PHE A . n A 1 171 VAL 171 425 425 VAL VAL A . n A 1 172 GLN 172 426 426 GLN GLN A . n A 1 173 GLU 173 427 427 GLU GLU A . n A 1 174 ASN 174 428 428 ASN ASN A . n A 1 175 ASN 175 429 429 ASN ASN A . n A 1 176 SER 176 430 430 SER SER A . n A 1 177 ASN 177 431 431 ASN ASN A . n A 1 178 THR 178 432 432 THR THR A . n A 1 179 THR 179 433 433 THR THR A . n A 1 180 ALA 180 434 434 ALA ALA A . n A 1 181 LEU 181 435 435 LEU LEU A . n A 1 182 TYR 182 436 436 TYR TYR A . n A 1 183 ALA 183 437 437 ALA ALA A . n A 1 184 VAL 184 438 438 VAL VAL A . n A 1 185 ALA 185 439 439 ALA ALA A . n A 1 186 SER 186 440 440 SER SER A . n A 1 187 PRO 187 441 441 PRO PRO A . n A 1 188 THR 188 442 442 THR THR A . n A 1 189 GLU 189 443 443 GLU GLU A . n A 1 190 LEU 190 444 444 LEU LEU A . n A 1 191 ALA 191 445 445 ALA ALA A . n A 1 192 GLU 192 446 446 GLU GLU A . n A 1 193 MSE 193 447 447 MSE MSE A . n A 1 194 LYS 194 448 448 LYS LYS A . n A 1 195 GLY 195 449 449 GLY GLY A . n A 1 196 TYR 196 450 450 TYR TYR A . n A 1 197 LEU 197 451 451 LEU LEU A . n A 1 198 THR 198 452 452 THR THR A . n A 1 199 ASN 199 453 453 ASN ASN A . n A 1 200 ILE 200 454 454 ILE ILE A . n A 1 201 VAL 201 455 455 VAL VAL A . n A 1 202 PRO 202 456 456 PRO PRO A . n A 1 203 ASN 203 457 457 ASN ASN A . n A 1 204 LEU 204 458 458 LEU LEU A . n A 1 205 ALA 205 459 459 ALA ALA A . n A 1 206 ILE 206 460 460 ILE ILE A . n A 1 207 TYR 207 461 461 TYR TYR A . n A 1 208 ALA 208 462 462 ALA ALA A . n A 1 209 SER 209 463 463 SER SER A . n A 1 210 SER 210 464 464 SER SER A . n A 1 211 ARG 211 465 465 ARG ARG A . n A 1 212 ALA 212 466 466 ALA ALA A . n A 1 213 SER 213 467 467 SER SER A . n A 1 214 ALA 214 468 468 ALA ALA A . n A 1 215 SER 215 469 469 SER SER A . n A 1 216 ALA 216 470 470 ALA ALA A . n A 1 217 THR 217 471 471 THR THR A . n A 1 218 ASN 218 472 472 ASN ASN A . n A 1 219 THR 219 473 473 THR THR A . n A 1 220 ASN 220 474 474 ASN ASN A . n A 1 221 THR 221 475 475 THR THR A . n A 1 222 ASP 222 476 476 ASP ASP A . n A 1 223 PHE 223 477 477 PHE PHE A . n A 1 224 ILE 224 478 478 ILE ILE A . n A 1 225 ALA 225 479 479 ALA ALA A . n A 1 226 GLN 226 480 480 GLN GLN A . n A 1 227 MSE 227 481 481 MSE MSE A . n A 1 228 ASN 228 482 482 ASN ASN A . n A 1 229 GLY 229 483 483 GLY GLY A . n A 1 230 VAL 230 484 484 VAL VAL A . n A 1 231 GLN 231 485 485 GLN GLN A . n A 1 232 PHE 232 486 486 PHE PHE A . n A 1 233 SER 233 487 487 SER SER A . n A 1 234 ASP 234 488 488 ASP ASP A . n A 1 235 ILE 235 489 489 ILE ILE A . n A 1 236 PRO 236 490 490 PRO PRO A . n A 1 237 PHE 237 491 491 PHE PHE A . n A 1 238 PHE 238 492 492 PHE PHE A . n A 1 239 LYS 239 493 493 LYS LYS A . n A 1 240 ASP 240 494 494 ASP ASP A . n A 1 241 THR 241 495 495 THR THR A . n A 1 242 ASN 242 496 496 ASN ASN A . n A 1 243 SER 243 497 497 SER SER A . n A 1 244 PRO 244 498 498 PRO PRO A . n A 1 245 GLN 245 499 499 GLN GLN A . n A 1 246 TYR 246 500 500 TYR TYR A . n A 1 247 GLN 247 501 501 GLN GLN A . n A 1 248 LYS 248 502 502 LYS LYS A . n A 1 249 LEU 249 503 503 LEU LEU A . n A 1 250 ALA 250 504 504 ALA ALA A . n A 1 251 LYS 251 505 505 LYS LYS A . n A 1 252 SER 252 506 506 SER SER A . n A 1 253 THR 253 507 507 THR THR A . n A 1 254 GLY 254 508 508 GLY GLY A . n A 1 255 GLY 255 509 509 GLY GLY A . n A 1 256 GLU 256 510 510 GLU GLU A . n A 1 257 TYR 257 511 511 TYR TYR A . n A 1 258 GLN 258 512 512 GLN GLN A . n A 1 259 LEU 259 513 513 LEU LEU A . n A 1 260 MSE 260 514 514 MSE MSE A . n A 1 261 ARG 261 515 515 ARG ARG A . n A 1 262 LEU 262 516 516 LEU LEU A . n A 1 263 TYR 263 517 517 TYR TYR A . n A 1 264 ALA 264 518 518 ALA ALA A . n A 1 265 MSE 265 519 519 MSE MSE A . n A 1 266 GLY 266 520 520 GLY GLY A . n A 1 267 ALA 267 521 521 ALA ALA A . n A 1 268 ASP 268 522 522 ASP ASP A . n A 1 269 ALA 269 523 523 ALA ALA A . n A 1 270 TRP 270 524 524 TRP TRP A . n A 1 271 LEU 271 525 525 LEU LEU A . n A 1 272 LEU 272 526 526 LEU LEU A . n A 1 273 ILE 273 527 527 ILE ILE A . n A 1 274 ASN 274 528 528 ASN ASN A . n A 1 275 GLN 275 529 529 GLN GLN A . n A 1 276 PHE 276 530 530 PHE PHE A . n A 1 277 ASN 277 531 531 ASN ASN A . n A 1 278 GLU 278 532 532 GLU GLU A . n A 1 279 LEU 279 533 533 LEU LEU A . n A 1 280 ARG 280 534 534 ARG ARG A . n A 1 281 GLN 281 535 535 GLN GLN A . n A 1 282 VAL 282 536 536 VAL VAL A . n A 1 283 PRO 283 537 537 PRO PRO A . n A 1 284 GLY 284 538 538 GLY GLY A . n A 1 285 TYR 285 539 539 TYR TYR A . n A 1 286 ARG 286 540 540 ARG ARG A . n A 1 287 LEU 287 541 541 LEU LEU A . n A 1 288 SER 288 542 542 SER SER A . n A 1 289 GLY 289 543 543 GLY GLY A . n A 1 290 LEU 290 544 544 LEU LEU A . n A 1 291 THR 291 545 545 THR THR A . n A 1 292 GLY 292 546 546 GLY GLY A . n A 1 293 ILE 293 547 547 ILE ILE A . n A 1 294 LEU 294 548 548 LEU LEU A . n A 1 295 SER 295 549 549 SER SER A . n A 1 296 ALA 296 550 550 ALA ALA A . n A 1 297 ASP 297 551 551 ASP ASP A . n A 1 298 THR 298 552 552 THR THR A . n A 1 299 ASN 299 553 553 ASN ASN A . n A 1 300 CYS 300 554 554 CYS CYS A . n A 1 301 ASN 301 555 555 ASN ASN A . n A 1 302 VAL 302 556 556 VAL VAL A . n A 1 303 GLU 303 557 557 GLU GLU A . n A 1 304 ARG 304 558 558 ARG ARG A . n A 1 305 ASP 305 559 559 ASP ASP A . n A 1 306 MSE 306 560 560 MSE MSE A . n A 1 307 THR 307 561 561 THR THR A . n A 1 308 TRP 308 562 562 TRP TRP A . n A 1 309 TYR 309 563 563 TYR TYR A . n A 1 310 GLN 310 564 564 GLN GLN A . n A 1 311 TYR 311 565 565 TYR TYR A . n A 1 312 GLN 312 566 566 GLN GLN A . n A 1 313 ASP 313 567 567 ASP ASP A . n A 1 314 GLY 314 568 568 GLY GLY A . n A 1 315 ALA 315 569 569 ALA ALA A . n A 1 316 ILE 316 570 570 ILE ILE A . n A 1 317 VAL 317 571 571 VAL VAL A . n A 1 318 PRO 318 572 572 PRO PRO A . n A 1 319 VAL 319 573 573 VAL VAL A . n A 1 320 VAL 320 574 574 VAL VAL A . n A 1 321 ASP 321 575 ? ? ? A . n A 1 322 HIS 322 576 ? ? ? A . n A 1 323 HIS 323 577 ? ? ? A . n A 1 324 HIS 324 578 ? ? ? A . n A 1 325 HIS 325 579 ? ? ? A . n A 1 326 HIS 326 580 ? ? ? A . n A 1 327 HIS 327 581 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 582 582 SO4 SO4 A . C 3 BME 1 583 583 BME BME A . D 4 HOH 1 601 601 HOH HOH A . D 4 HOH 2 602 602 HOH HOH A . D 4 HOH 3 603 603 HOH HOH A . D 4 HOH 4 604 604 HOH HOH A . D 4 HOH 5 605 605 HOH HOH A . D 4 HOH 6 606 606 HOH HOH A . D 4 HOH 7 607 607 HOH HOH A . D 4 HOH 8 608 608 HOH HOH A . D 4 HOH 9 609 609 HOH HOH A . D 4 HOH 10 610 610 HOH HOH A . D 4 HOH 11 611 611 HOH HOH A . D 4 HOH 12 612 612 HOH HOH A . D 4 HOH 13 613 613 HOH HOH A . D 4 HOH 14 614 614 HOH HOH A . D 4 HOH 15 615 615 HOH HOH A . D 4 HOH 16 616 616 HOH HOH A . D 4 HOH 17 617 617 HOH HOH A . D 4 HOH 18 618 618 HOH HOH A . D 4 HOH 19 619 619 HOH HOH A . D 4 HOH 20 620 620 HOH HOH A . D 4 HOH 21 621 621 HOH HOH A . D 4 HOH 22 622 622 HOH HOH A . D 4 HOH 23 623 623 HOH HOH A . D 4 HOH 24 624 624 HOH HOH A . D 4 HOH 25 625 625 HOH HOH A . D 4 HOH 26 626 626 HOH HOH A . D 4 HOH 27 627 627 HOH HOH A . D 4 HOH 28 628 628 HOH HOH A . D 4 HOH 29 629 629 HOH HOH A . D 4 HOH 30 630 630 HOH HOH A . D 4 HOH 31 631 631 HOH HOH A . D 4 HOH 32 632 632 HOH HOH A . D 4 HOH 33 633 633 HOH HOH A . D 4 HOH 34 634 634 HOH HOH A . D 4 HOH 35 635 635 HOH HOH A . D 4 HOH 36 636 636 HOH HOH A . D 4 HOH 37 637 637 HOH HOH A . D 4 HOH 38 638 638 HOH HOH A . D 4 HOH 39 639 639 HOH HOH A . D 4 HOH 40 640 640 HOH HOH A . D 4 HOH 41 641 641 HOH HOH A . D 4 HOH 42 642 642 HOH HOH A . D 4 HOH 43 643 643 HOH HOH A . D 4 HOH 44 644 644 HOH HOH A . D 4 HOH 45 645 645 HOH HOH A . D 4 HOH 46 646 646 HOH HOH A . D 4 HOH 47 647 647 HOH HOH A . D 4 HOH 48 648 648 HOH HOH A . D 4 HOH 49 649 649 HOH HOH A . D 4 HOH 50 650 650 HOH HOH A . D 4 HOH 51 651 651 HOH HOH A . D 4 HOH 52 652 652 HOH HOH A . D 4 HOH 53 653 653 HOH HOH A . D 4 HOH 54 654 654 HOH HOH A . D 4 HOH 55 655 655 HOH HOH A . D 4 HOH 56 656 656 HOH HOH A . D 4 HOH 57 657 657 HOH HOH A . D 4 HOH 58 658 658 HOH HOH A . D 4 HOH 59 659 659 HOH HOH A . D 4 HOH 60 660 660 HOH HOH A . D 4 HOH 61 661 661 HOH HOH A . D 4 HOH 62 662 662 HOH HOH A . D 4 HOH 63 663 663 HOH HOH A . D 4 HOH 64 664 664 HOH HOH A . D 4 HOH 65 665 665 HOH HOH A . D 4 HOH 66 666 666 HOH HOH A . D 4 HOH 67 667 667 HOH HOH A . D 4 HOH 68 668 668 HOH HOH A . D 4 HOH 69 669 669 HOH HOH A . D 4 HOH 70 670 670 HOH HOH A . D 4 HOH 71 671 671 HOH HOH A . D 4 HOH 72 672 672 HOH HOH A . D 4 HOH 73 673 673 HOH HOH A . D 4 HOH 74 674 674 HOH HOH A . D 4 HOH 75 675 675 HOH HOH A . D 4 HOH 76 676 676 HOH HOH A . D 4 HOH 77 677 677 HOH HOH A . D 4 HOH 78 678 678 HOH HOH A . D 4 HOH 79 679 679 HOH HOH A . D 4 HOH 80 680 680 HOH HOH A . D 4 HOH 81 681 681 HOH HOH A . D 4 HOH 82 682 682 HOH HOH A . D 4 HOH 83 683 683 HOH HOH A . D 4 HOH 84 684 684 HOH HOH A . D 4 HOH 85 685 685 HOH HOH A . D 4 HOH 86 686 686 HOH HOH A . D 4 HOH 87 687 687 HOH HOH A . D 4 HOH 88 688 688 HOH HOH A . D 4 HOH 89 689 689 HOH HOH A . D 4 HOH 90 690 690 HOH HOH A . D 4 HOH 91 691 691 HOH HOH A . D 4 HOH 92 692 692 HOH HOH A . D 4 HOH 93 693 693 HOH HOH A . D 4 HOH 94 694 694 HOH HOH A . D 4 HOH 95 695 695 HOH HOH A . D 4 HOH 96 696 696 HOH HOH A . D 4 HOH 97 697 697 HOH HOH A . D 4 HOH 98 698 698 HOH HOH A . D 4 HOH 99 699 699 HOH HOH A . D 4 HOH 100 700 700 HOH HOH A . D 4 HOH 101 701 701 HOH HOH A . D 4 HOH 102 702 702 HOH HOH A . D 4 HOH 103 703 703 HOH HOH A . D 4 HOH 104 704 704 HOH HOH A . D 4 HOH 105 705 705 HOH HOH A . D 4 HOH 106 706 706 HOH HOH A . D 4 HOH 107 707 707 HOH HOH A . D 4 HOH 108 708 708 HOH HOH A . D 4 HOH 109 709 709 HOH HOH A . D 4 HOH 110 710 710 HOH HOH A . D 4 HOH 111 711 711 HOH HOH A . D 4 HOH 112 712 712 HOH HOH A . D 4 HOH 113 713 713 HOH HOH A . D 4 HOH 114 714 714 HOH HOH A . D 4 HOH 115 715 715 HOH HOH A . D 4 HOH 116 716 716 HOH HOH A . D 4 HOH 117 717 717 HOH HOH A . D 4 HOH 118 718 718 HOH HOH A . D 4 HOH 119 719 719 HOH HOH A . D 4 HOH 120 720 720 HOH HOH A . D 4 HOH 121 721 721 HOH HOH A . D 4 HOH 122 722 722 HOH HOH A . D 4 HOH 123 723 723 HOH HOH A . D 4 HOH 124 724 724 HOH HOH A . D 4 HOH 125 725 725 HOH HOH A . D 4 HOH 126 726 726 HOH HOH A . D 4 HOH 127 727 727 HOH HOH A . D 4 HOH 128 728 728 HOH HOH A . D 4 HOH 129 729 729 HOH HOH A . D 4 HOH 130 730 730 HOH HOH A . D 4 HOH 131 731 731 HOH HOH A . D 4 HOH 132 732 732 HOH HOH A . D 4 HOH 133 733 733 HOH HOH A . D 4 HOH 134 734 734 HOH HOH A . D 4 HOH 135 735 735 HOH HOH A . D 4 HOH 136 736 736 HOH HOH A . D 4 HOH 137 737 737 HOH HOH A . D 4 HOH 138 738 738 HOH HOH A . D 4 HOH 139 739 739 HOH HOH A . D 4 HOH 140 740 740 HOH HOH A . D 4 HOH 141 741 741 HOH HOH A . D 4 HOH 142 742 742 HOH HOH A . D 4 HOH 143 743 743 HOH HOH A . D 4 HOH 144 744 744 HOH HOH A . D 4 HOH 145 745 745 HOH HOH A . D 4 HOH 146 746 746 HOH HOH A . D 4 HOH 147 747 747 HOH HOH A . D 4 HOH 148 748 748 HOH HOH A . D 4 HOH 149 749 749 HOH HOH A . D 4 HOH 150 750 750 HOH HOH A . D 4 HOH 151 751 751 HOH HOH A . D 4 HOH 152 752 752 HOH HOH A . D 4 HOH 153 753 753 HOH HOH A . D 4 HOH 154 754 754 HOH HOH A . D 4 HOH 155 755 755 HOH HOH A . D 4 HOH 156 756 756 HOH HOH A . D 4 HOH 157 757 757 HOH HOH A . D 4 HOH 158 758 758 HOH HOH A . D 4 HOH 159 759 759 HOH HOH A . D 4 HOH 160 760 760 HOH HOH A . D 4 HOH 161 761 761 HOH HOH A . D 4 HOH 162 762 762 HOH HOH A . D 4 HOH 163 763 763 HOH HOH A . D 4 HOH 164 764 764 HOH HOH A . D 4 HOH 165 765 765 HOH HOH A . D 4 HOH 166 766 766 HOH HOH A . D 4 HOH 167 767 767 HOH HOH A . D 4 HOH 168 768 768 HOH HOH A . D 4 HOH 169 769 769 HOH HOH A . D 4 HOH 170 770 770 HOH HOH A . D 4 HOH 171 771 771 HOH HOH A . D 4 HOH 172 772 772 HOH HOH A . D 4 HOH 173 773 773 HOH HOH A . D 4 HOH 174 774 774 HOH HOH A . D 4 HOH 175 775 775 HOH HOH A . D 4 HOH 176 776 776 HOH HOH A . D 4 HOH 177 777 777 HOH HOH A . D 4 HOH 178 778 778 HOH HOH A . D 4 HOH 179 779 779 HOH HOH A . D 4 HOH 180 780 780 HOH HOH A . D 4 HOH 181 781 781 HOH HOH A . D 4 HOH 182 782 782 HOH HOH A . D 4 HOH 183 783 783 HOH HOH A . D 4 HOH 184 784 784 HOH HOH A . D 4 HOH 185 785 785 HOH HOH A . D 4 HOH 186 786 786 HOH HOH A . D 4 HOH 187 787 787 HOH HOH A . D 4 HOH 188 788 788 HOH HOH A . D 4 HOH 189 789 789 HOH HOH A . D 4 HOH 190 790 790 HOH HOH A . D 4 HOH 191 791 791 HOH HOH A . D 4 HOH 192 792 792 HOH HOH A . D 4 HOH 193 793 793 HOH HOH A . D 4 HOH 194 794 794 HOH HOH A . D 4 HOH 195 795 795 HOH HOH A . D 4 HOH 196 796 796 HOH HOH A . D 4 HOH 197 797 797 HOH HOH A . D 4 HOH 198 798 798 HOH HOH A . D 4 HOH 199 799 799 HOH HOH A . D 4 HOH 200 800 800 HOH HOH A . D 4 HOH 201 801 801 HOH HOH A . D 4 HOH 202 802 802 HOH HOH A . D 4 HOH 203 803 803 HOH HOH A . D 4 HOH 204 804 804 HOH HOH A . D 4 HOH 205 805 805 HOH HOH A . D 4 HOH 206 806 806 HOH HOH A . D 4 HOH 207 807 807 HOH HOH A . D 4 HOH 208 808 808 HOH HOH A . D 4 HOH 209 809 809 HOH HOH A . D 4 HOH 210 810 810 HOH HOH A . D 4 HOH 211 811 811 HOH HOH A . D 4 HOH 212 812 812 HOH HOH A . D 4 HOH 213 813 813 HOH HOH A . D 4 HOH 214 814 814 HOH HOH A . D 4 HOH 215 815 815 HOH HOH A . D 4 HOH 216 816 816 HOH HOH A . D 4 HOH 217 817 817 HOH HOH A . D 4 HOH 218 818 818 HOH HOH A . D 4 HOH 219 819 819 HOH HOH A . D 4 HOH 220 820 820 HOH HOH A . D 4 HOH 221 821 821 HOH HOH A . D 4 HOH 222 822 822 HOH HOH A . D 4 HOH 223 823 823 HOH HOH A . D 4 HOH 224 824 824 HOH HOH A . D 4 HOH 225 825 825 HOH HOH A . D 4 HOH 226 826 826 HOH HOH A . D 4 HOH 227 827 827 HOH HOH A . D 4 HOH 228 828 828 HOH HOH A . D 4 HOH 229 829 829 HOH HOH A . D 4 HOH 230 830 830 HOH HOH A . D 4 HOH 231 831 831 HOH HOH A . D 4 HOH 232 832 832 HOH HOH A . D 4 HOH 233 833 833 HOH HOH A . D 4 HOH 234 834 834 HOH HOH A . D 4 HOH 235 835 835 HOH HOH A . D 4 HOH 236 836 836 HOH HOH A . D 4 HOH 237 837 837 HOH HOH A . D 4 HOH 238 838 838 HOH HOH A . D 4 HOH 239 839 839 HOH HOH A . D 4 HOH 240 840 840 HOH HOH A . D 4 HOH 241 841 841 HOH HOH A . D 4 HOH 242 842 842 HOH HOH A . D 4 HOH 243 843 843 HOH HOH A . D 4 HOH 244 844 844 HOH HOH A . D 4 HOH 245 845 845 HOH HOH A . D 4 HOH 246 846 846 HOH HOH A . D 4 HOH 247 847 847 HOH HOH A . D 4 HOH 248 848 848 HOH HOH A . D 4 HOH 249 849 849 HOH HOH A . D 4 HOH 250 850 850 HOH HOH A . D 4 HOH 251 851 851 HOH HOH A . D 4 HOH 252 852 852 HOH HOH A . D 4 HOH 253 853 853 HOH HOH A . D 4 HOH 254 854 854 HOH HOH A . D 4 HOH 255 855 855 HOH HOH A . D 4 HOH 256 856 856 HOH HOH A . D 4 HOH 257 857 857 HOH HOH A . D 4 HOH 258 858 858 HOH HOH A . D 4 HOH 259 859 859 HOH HOH A . D 4 HOH 260 860 860 HOH HOH A . D 4 HOH 261 861 861 HOH HOH A . D 4 HOH 262 862 862 HOH HOH A . D 4 HOH 263 863 863 HOH HOH A . D 4 HOH 264 864 864 HOH HOH A . D 4 HOH 265 865 865 HOH HOH A . D 4 HOH 266 866 866 HOH HOH A . D 4 HOH 267 867 867 HOH HOH A . D 4 HOH 268 868 868 HOH HOH A . D 4 HOH 269 869 869 HOH HOH A . D 4 HOH 270 870 870 HOH HOH A . D 4 HOH 271 871 871 HOH HOH A . D 4 HOH 272 872 872 HOH HOH A . D 4 HOH 273 873 873 HOH HOH A . D 4 HOH 274 874 874 HOH HOH A . D 4 HOH 275 875 875 HOH HOH A . D 4 HOH 276 876 876 HOH HOH A . D 4 HOH 277 877 877 HOH HOH A . D 4 HOH 278 878 878 HOH HOH A . D 4 HOH 279 879 879 HOH HOH A . D 4 HOH 280 880 880 HOH HOH A . D 4 HOH 281 881 881 HOH HOH A . D 4 HOH 282 882 882 HOH HOH A . D 4 HOH 283 883 883 HOH HOH A . D 4 HOH 284 884 884 HOH HOH A . D 4 HOH 285 885 885 HOH HOH A . D 4 HOH 286 886 886 HOH HOH A . D 4 HOH 287 887 887 HOH HOH A . D 4 HOH 288 888 888 HOH HOH A . D 4 HOH 289 889 889 HOH HOH A . D 4 HOH 290 890 890 HOH HOH A . D 4 HOH 291 891 891 HOH HOH A . D 4 HOH 292 892 892 HOH HOH A . D 4 HOH 293 893 893 HOH HOH A . D 4 HOH 294 894 894 HOH HOH A . D 4 HOH 295 895 895 HOH HOH A . D 4 HOH 296 896 896 HOH HOH A . D 4 HOH 297 897 897 HOH HOH A . D 4 HOH 298 898 898 HOH HOH A . D 4 HOH 299 899 899 HOH HOH A . D 4 HOH 300 900 900 HOH HOH A . D 4 HOH 301 901 901 HOH HOH A . D 4 HOH 302 902 902 HOH HOH A . D 4 HOH 303 903 903 HOH HOH A . D 4 HOH 304 904 904 HOH HOH A . D 4 HOH 305 905 905 HOH HOH A . D 4 HOH 306 906 906 HOH HOH A . D 4 HOH 307 907 907 HOH HOH A . D 4 HOH 308 908 908 HOH HOH A . D 4 HOH 309 909 909 HOH HOH A . D 4 HOH 310 910 910 HOH HOH A . D 4 HOH 311 911 911 HOH HOH A . D 4 HOH 312 912 912 HOH HOH A . D 4 HOH 313 913 913 HOH HOH A . D 4 HOH 314 914 914 HOH HOH A . D 4 HOH 315 915 915 HOH HOH A . D 4 HOH 316 916 916 HOH HOH A . D 4 HOH 317 917 917 HOH HOH A . D 4 HOH 318 918 918 HOH HOH A . D 4 HOH 319 919 919 HOH HOH A . D 4 HOH 320 920 920 HOH HOH A . D 4 HOH 321 921 921 HOH HOH A . D 4 HOH 322 922 922 HOH HOH A . D 4 HOH 323 923 923 HOH HOH A . D 4 HOH 324 924 924 HOH HOH A . D 4 HOH 325 925 925 HOH HOH A . D 4 HOH 326 926 926 HOH HOH A . D 4 HOH 327 927 927 HOH HOH A . D 4 HOH 328 928 928 HOH HOH A . D 4 HOH 329 929 929 HOH HOH A . D 4 HOH 330 930 930 HOH HOH A . D 4 HOH 331 931 931 HOH HOH A . D 4 HOH 332 932 932 HOH HOH A . D 4 HOH 333 933 933 HOH HOH A . D 4 HOH 334 934 934 HOH HOH A . D 4 HOH 335 935 935 HOH HOH A . D 4 HOH 336 936 936 HOH HOH A . D 4 HOH 337 937 937 HOH HOH A . D 4 HOH 338 938 938 HOH HOH A . D 4 HOH 339 939 939 HOH HOH A . D 4 HOH 340 940 940 HOH HOH A . D 4 HOH 341 941 941 HOH HOH A . D 4 HOH 342 942 942 HOH HOH A . D 4 HOH 343 943 943 HOH HOH A . D 4 HOH 344 944 944 HOH HOH A . D 4 HOH 345 945 945 HOH HOH A . D 4 HOH 346 946 946 HOH HOH A . D 4 HOH 347 947 947 HOH HOH A . D 4 HOH 348 948 948 HOH HOH A . D 4 HOH 349 949 949 HOH HOH A . D 4 HOH 350 950 950 HOH HOH A . D 4 HOH 351 951 951 HOH HOH A . D 4 HOH 352 952 952 HOH HOH A . D 4 HOH 353 953 953 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 44 A MSE 298 ? MET SELENOMETHIONINE 2 A MSE 84 A MSE 338 ? MET SELENOMETHIONINE 3 A MSE 119 A MSE 373 ? MET SELENOMETHIONINE 4 A MSE 131 A MSE 385 ? MET SELENOMETHIONINE 5 A MSE 193 A MSE 447 ? MET SELENOMETHIONINE 6 A MSE 227 A MSE 481 ? MET SELENOMETHIONINE 7 A MSE 260 A MSE 514 ? MET SELENOMETHIONINE 8 A MSE 265 A MSE 519 ? MET SELENOMETHIONINE 9 A MSE 306 A MSE 560 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 917 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' citation_author 3 3 'Structure model' pdbx_database_related 4 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 5 3 'Structure model' pdbx_unobs_or_zero_occ_residues 6 3 'Structure model' struct 7 3 'Structure model' struct_keywords # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_struct.title' 2 3 'Structure model' '_struct_keywords.text' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.090 _diffrn_reflns.pdbx_d_res_low 47.100 _diffrn_reflns.pdbx_number_obs 106384 _diffrn_reflns.pdbx_Rmerge_I_obs 0.095 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.51 _diffrn_reflns.av_sigmaI_over_netI 10.80 _diffrn_reflns.pdbx_redundancy 5.58 _diffrn_reflns.pdbx_percent_possible_obs 76.70 _diffrn_reflns.number 596801 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 2.35 47.10 ? 1377 0.071 ? 3.660 6.12 98.70 1 1.87 2.35 ? 929 0.099 ? 1.800 6.22 100.00 1 1.63 1.87 ? 667 0.172 ? 1.150 6.16 99.90 1 1.48 1.63 ? 284 0.291 ? 0.980 6.13 99.70 1 1.38 1.48 ? 107 0.459 ? 0.940 6.15 99.30 1 1.29 1.38 ? 52 0.584 ? 0.950 5.72 97.70 1 1.23 1.29 ? 17 0.632 ? 0.930 4.21 77.90 1 1.18 1.23 ? 10 0.674 ? 0.960 3.64 53.00 1 1.13 1.18 ? 7 0.705 ? 0.980 3.34 29.90 1 1.09 1.13 ? 2 0.717 ? 0.980 2.87 10.10 # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.fract_x _pdbx_phasing_MAD_set_site.fract_y _pdbx_phasing_MAD_set_site.fract_z _pdbx_phasing_MAD_set_site.b_iso 1 Se 0.623 0.190 0.002 0.134 21.054 2 Se 0.533 0.857 0.399 0.278 17.010 3 Se 0.776 0.754 0.234 0.191 18.774 4 Se 0.524 0.432 0.037 0.233 16.239 5 Se 0.519 0.346 0.209 0.306 16.521 6 Se 0.537 0.702 0.394 0.034 25.490 7 Se 0.628 0.787 0.300 0.063 18.836 8 Se 0.631 0.114 0.460 0.249 28.330 9 Se 0.328 0.540 0.308 0.132 30.641 # _phasing.method MAD # _phasing_MAD_clust.id 1 _phasing_MAD_clust.expt_id '3 wavelength' _phasing_MAD_clust.number_set ? # _phasing_MAD_expt.id '3 wavelength' _phasing_MAD_expt.mean_fom ? # loop_ _phasing_MAD_set.clust_id _phasing_MAD_set.expt_id _phasing_MAD_set.set_id _phasing_MAD_set.wavelength _phasing_MAD_set.pdbx_f_prime_refined _phasing_MAD_set.pdbx_f_double_prime_refined 1 '3 wavelength' 1 0.9786 -10.06 3.39 1 '3 wavelength' 2 0.9784 -8.13 5.05 1 '3 wavelength' 3 0.9632 -3.11 3.72 # loop_ _phasing_set.id _phasing_set.pdbx_d_res_high _phasing_set.pdbx_d_res_low 1 . . 2 . . 3 . . # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal d*TREK 9.3D 'Nov 24 2004' package 'Pflugrath, J.W.' jwp@RigakuMSC.com 'data scaling' http://www.msc.com/protein/dtrek.html ? ? 1 SOLVE 2.06 28-Dec-2003 package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 2 REFMAC refmac_5.4.0034 24/04/2001 program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 d*TREK . ? ? ? ? 'data reduction' ? ? ? 5 # _pdbx_entry_details.entry_id 3CKM _pdbx_entry_details.compound_details 'THE CHEMICAL IDENTITY OF BME A 583 IS UNKNOWN BUT MODELED AS BETA-MERCAPTOETHANOL' _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.source_details ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 SER _pdbx_validate_rmsd_angle.auth_seq_id_1 349 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 SER _pdbx_validate_rmsd_angle.auth_seq_id_2 349 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 SER _pdbx_validate_rmsd_angle.auth_seq_id_3 349 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 96.25 _pdbx_validate_rmsd_angle.angle_target_value 110.10 _pdbx_validate_rmsd_angle.angle_deviation -13.85 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 354 ? ? 59.24 14.49 2 1 ASN A 429 ? ? -56.51 -178.69 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 255 ? A MET 1 2 1 Y 1 A VAL 256 ? A VAL 2 3 1 Y 1 A ASP 575 ? A ASP 321 4 1 Y 1 A HIS 576 ? A HIS 322 5 1 Y 1 A HIS 577 ? A HIS 323 6 1 Y 1 A HIS 578 ? A HIS 324 7 1 Y 1 A HIS 579 ? A HIS 325 8 1 Y 1 A HIS 580 ? A HIS 326 9 1 Y 1 A HIS 581 ? A HIS 327 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 BETA-MERCAPTOETHANOL BME 4 water HOH #