HEADER UNKNOWN FUNCTION 17-MAR-08 3CKV TITLE CRYSTAL STRUCTURE OF A MYCOBACTERIAL PROTEIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM PARATUBERCULOSIS; SOURCE 3 STRAIN: K-10 KEYWDS MYCOBACTERIA, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Z.MARLAND,J.ROSSJOHN REVDAT 6 21-FEB-24 3CKV 1 REMARK REVDAT 5 13-JUL-11 3CKV 1 VERSN REVDAT 4 24-FEB-09 3CKV 1 VERSN REVDAT 3 18-NOV-08 3CKV 1 JRNL REVDAT 2 05-AUG-08 3CKV 1 REMARK REVDAT 1 29-JUL-08 3CKV 0 JRNL AUTH Z.FULTON,A.MCALISTER,M.C.WILCE,R.BRAMMANANTH, JRNL AUTH 2 L.ZAKER-TABRIZI,M.A.PERUGINI,S.P.BOTTOMLEY,R.L.COPPEL, JRNL AUTH 3 P.K.CRELLIN,J.ROSSJOHN,T.BEDDOE JRNL TITL CRYSTAL STRUCTURE OF A UDP-GLUCOSE-SPECIFIC JRNL TITL 2 GLYCOSYLTRANSFERASE FROM A MYCOBACTERIUM SPECIES. JRNL REF J.BIOL.CHEM. V. 283 27881 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18667419 JRNL DOI 10.1074/JBC.M801853200 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 26692 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 879 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1949 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3160 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.3940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2232 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 38 REMARK 3 SOLVENT ATOMS : 48 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.122 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.477 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2391 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3295 ; 1.432 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 324 ; 5.998 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;33.692 ;23.187 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 362 ;15.076 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;18.262 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 390 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1820 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1064 ; 0.199 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1589 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 105 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 61 ; 0.189 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 7 ; 0.112 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1582 ; 0.573 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2489 ; 0.991 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 920 ; 1.422 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 794 ; 2.094 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 15 A 48 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5866 12.2636 30.5114 REMARK 3 T TENSOR REMARK 3 T11: 1.5675 T22: 0.0958 REMARK 3 T33: -0.0345 T12: 0.4728 REMARK 3 T13: 0.0847 T23: 0.4667 REMARK 3 L TENSOR REMARK 3 L11: 7.2733 L22: 3.8576 REMARK 3 L33: 3.5673 L12: -1.7241 REMARK 3 L13: -0.4274 L23: 3.5966 REMARK 3 S TENSOR REMARK 3 S11: -0.3957 S12: -1.4987 S13: -0.8165 REMARK 3 S21: 2.1112 S22: 0.5956 S23: -0.4490 REMARK 3 S31: 1.5752 S32: 1.7463 S33: -0.1999 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 49 A 156 REMARK 3 ORIGIN FOR THE GROUP (A): 7.2114 26.8444 24.8123 REMARK 3 T TENSOR REMARK 3 T11: 0.5036 T22: 0.1248 REMARK 3 T33: 0.4157 T12: -0.0966 REMARK 3 T13: 0.3499 T23: -0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.2109 L22: 4.2548 REMARK 3 L33: 3.7509 L12: -1.3325 REMARK 3 L13: -1.3686 L23: 0.6470 REMARK 3 S TENSOR REMARK 3 S11: -0.4060 S12: -0.3320 S13: -0.1636 REMARK 3 S21: 1.1043 S22: 0.0134 S23: 1.2107 REMARK 3 S31: 0.6540 S32: -0.6200 S33: 0.3925 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 157 A 255 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8901 23.0455 16.7405 REMARK 3 T TENSOR REMARK 3 T11: 0.3575 T22: 0.1184 REMARK 3 T33: 0.2107 T12: 0.0549 REMARK 3 T13: -0.0264 T23: 0.0316 REMARK 3 L TENSOR REMARK 3 L11: 2.0709 L22: 3.7142 REMARK 3 L33: 4.8217 L12: -1.0082 REMARK 3 L13: -1.0868 L23: 1.7361 REMARK 3 S TENSOR REMARK 3 S11: -0.2202 S12: -0.4196 S13: -0.1533 REMARK 3 S21: 0.8822 S22: 0.1953 S23: 0.0705 REMARK 3 S31: 0.6887 S32: 0.3472 S33: 0.0249 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 256 A 269 REMARK 3 ORIGIN FOR THE GROUP (A): 10.8796 14.1578 14.1300 REMARK 3 T TENSOR REMARK 3 T11: 0.7125 T22: 0.1879 REMARK 3 T33: 0.6872 T12: -0.1014 REMARK 3 T13: 0.2698 T23: 0.2200 REMARK 3 L TENSOR REMARK 3 L11: 0.9029 L22: 0.2857 REMARK 3 L33: 7.6344 L12: -0.5079 REMARK 3 L13: 2.6255 L23: -1.4768 REMARK 3 S TENSOR REMARK 3 S11: -0.6181 S12: 0.3304 S13: -0.6767 REMARK 3 S21: 1.0255 S22: 0.2486 S23: 1.4480 REMARK 3 S31: 0.8822 S32: -1.9321 S33: 0.3694 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 270 A 312 REMARK 3 ORIGIN FOR THE GROUP (A): 13.7930 27.9264 -3.1670 REMARK 3 T TENSOR REMARK 3 T11: 0.1108 T22: 0.1527 REMARK 3 T33: 0.3096 T12: 0.0239 REMARK 3 T13: -0.0594 T23: -0.0426 REMARK 3 L TENSOR REMARK 3 L11: 3.3925 L22: 3.0922 REMARK 3 L33: 4.8043 L12: -0.6695 REMARK 3 L13: 0.7388 L23: 1.5158 REMARK 3 S TENSOR REMARK 3 S11: 0.1120 S12: 0.2999 S13: -0.1391 REMARK 3 S21: -0.0911 S22: -0.2759 S23: 0.4304 REMARK 3 S31: -0.1446 S32: -0.4053 S33: 0.1639 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 313 A 329 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0527 39.0760 15.5046 REMARK 3 T TENSOR REMARK 3 T11: 0.2852 T22: 0.1036 REMARK 3 T33: 0.3389 T12: 0.0110 REMARK 3 T13: 0.0264 T23: -0.0350 REMARK 3 L TENSOR REMARK 3 L11: 3.6840 L22: 5.7525 REMARK 3 L33: 8.5246 L12: 0.5259 REMARK 3 L13: 0.8101 L23: 3.4606 REMARK 3 S TENSOR REMARK 3 S11: 0.0737 S12: -0.3085 S13: 0.2120 REMARK 3 S21: 0.4600 S22: 0.0062 S23: 0.1259 REMARK 3 S31: -0.4182 S32: -0.1190 S33: -0.0799 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3CKV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000046899. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0053 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26692 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 43.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.68400 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: RIGID BODY REFINEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M AMMONIUM SULPHATE, 0.1 M HEPES PH REMARK 280 7.0, 20 MM MANGANESE CHLORIDE, 1 MM SODIUM THIOSULPHATE, 100 MM REMARK 280 URIDINE-5 -DIPHOSPHATE-N-ACETYL-GLUCOSAMINE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.96600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.48350 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.48350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.98300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.48350 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.48350 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 77.94900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.48350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.48350 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.98300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.48350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.48350 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.94900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.96600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ASP A 5 REMARK 465 LEU A 6 REMARK 465 VAL A 7 REMARK 465 ALA A 8 REMARK 465 GLY A 9 REMARK 465 GLU A 10 REMARK 465 LEU A 11 REMARK 465 ALA A 12 REMARK 465 GLY A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 174 REMARK 465 ASN A 175 REMARK 465 VAL A 176 REMARK 465 GLY A 177 REMARK 465 ASP A 178 REMARK 465 ALA A 179 REMARK 465 GLY A 180 REMARK 465 GLY A 181 REMARK 465 GLY A 182 REMARK 465 ALA A 183 REMARK 465 GLY A 184 REMARK 465 ALA A 185 REMARK 465 THR A 186 REMARK 465 GLY A 187 REMARK 465 GLY A 188 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 20 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 29 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 131 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 223 CG CD OE1 OE2 REMARK 470 ARG A 264 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 306 CG CD OE1 NE2 REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 337 O HOH A 381 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLY A 15 N GLY A 15 CA 0.115 REMARK 500 ASP A 18 CG ASP A 18 OD1 0.178 REMARK 500 ASP A 18 CG ASP A 18 OD2 0.260 REMARK 500 THR A 19 C ARG A 20 N 0.164 REMARK 500 ARG A 20 CA ARG A 20 CB 0.182 REMARK 500 TRP A 36 C TRP A 36 O 0.139 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 18 CB - CG - OD1 ANGL. DEV. = -7.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 21 103.88 -59.23 REMARK 500 ARG A 29 19.53 58.06 REMARK 500 ASP A 75 -0.51 70.42 REMARK 500 SER A 86 43.73 -104.64 REMARK 500 SER A 86 42.29 -103.68 REMARK 500 ASP A 90 -154.48 -95.69 REMARK 500 LEU A 110 72.22 -157.15 REMARK 500 ILE A 326 -55.59 -126.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ARG A 20 -13.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 UDP A 331 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 330 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UDP A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 333 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3CKJ RELATED DB: PDB REMARK 900 RELATED ID: 3CKN RELATED DB: PDB REMARK 900 RELATED ID: 3KCO RELATED DB: PDB REMARK 900 RELATED ID: 3KCQ RELATED DB: PDB DBREF 3CKV A 1 329 UNP Q73WU1 Q73WU1_MYCPA 1 329 SEQRES 1 A 329 MET THR THR SER ASP LEU VAL ALA GLY GLU LEU ALA GLY SEQRES 2 A 329 ASP GLY LEU ARG ASP THR ARG PRO GLY ASP THR TRP LEU SEQRES 3 A 329 ALA ASP ARG SER TRP ASN ARG PRO GLY TRP THR VAL ALA SEQRES 4 A 329 GLU LEU GLU ALA ALA LYS ALA GLY ARG THR ILE SER VAL SEQRES 5 A 329 VAL LEU PRO ALA LEU ASP GLU GLU ASP THR ILE GLY SER SEQRES 6 A 329 VAL ILE ASP SER ILE SER PRO LEU VAL ASP GLY LEU VAL SEQRES 7 A 329 ASP GLU LEU ILE VAL LEU ASP SER GLY SER THR ASP ASP SEQRES 8 A 329 THR GLU ILE ARG ALA VAL ALA ALA GLY ALA ARG VAL VAL SEQRES 9 A 329 SER ARG GLU GLN ALA LEU PRO GLU VAL PRO ILE ARG PRO SEQRES 10 A 329 GLY LYS GLY GLU ALA LEU TRP ARG SER LEU ALA ALA SER SEQRES 11 A 329 ARG GLY ASP ILE VAL VAL PHE VAL ASP SER ASP LEU ILE SEQRES 12 A 329 ASN PRO HIS PRO MET PHE VAL PRO TRP LEU VAL GLY PRO SEQRES 13 A 329 LEU LEU THR GLY ASP GLY VAL HIS LEU VAL LYS SER PHE SEQRES 14 A 329 TYR ARG ARG PRO LEU ASN VAL GLY ASP ALA GLY GLY GLY SEQRES 15 A 329 ALA GLY ALA THR GLY GLY GLY ARG VAL THR GLU LEU VAL SEQRES 16 A 329 ALA ARG PRO LEU LEU ALA ALA LEU ARG PRO GLU LEU GLY SEQRES 17 A 329 CYS ILE LEU GLN PRO LEU GLY GLY GLU TYR ALA ALA THR SEQRES 18 A 329 ARG GLU LEU LEU THR SER VAL PRO PHE ALA PRO GLY TYR SEQRES 19 A 329 GLY VAL GLU ILE GLY LEU LEU VAL ASP THR PHE ASP ARG SEQRES 20 A 329 LEU GLY LEU ASP ALA ILE ALA GLN VAL ASN LEU GLY VAL SEQRES 21 A 329 ARG GLU HIS ARG ASN ARG PRO LEU ALA GLU LEU GLY ALA SEQRES 22 A 329 MET SER ARG GLN VAL ILE ALA THR LEU LEU SER ARG CYS SEQRES 23 A 329 GLY ILE PRO ASP SER GLY VAL GLY LEU THR GLN PHE VAL SEQRES 24 A 329 ALA ASP GLY PRO GLU GLY GLN SER TYR THR GLN HIS THR SEQRES 25 A 329 TRP PRO VAL SER LEU ALA ASP ARG PRO PRO MET GLN ALA SEQRES 26 A 329 ILE ARG PRO ARG HET SO4 A 330 5 HET UDP A 331 21 HET GOL A 332 6 HET GOL A 333 6 HETNAM SO4 SULFATE ION HETNAM UDP URIDINE-5'-DIPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 O4 S 2- FORMUL 3 UDP C9 H14 N2 O12 P2 FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *48(H2 O) HELIX 1 1 THR A 37 LYS A 45 1 9 HELIX 2 2 THR A 62 SER A 71 1 10 HELIX 3 3 PRO A 72 VAL A 74 5 3 HELIX 4 4 ASP A 91 GLY A 100 1 10 HELIX 5 5 ARG A 106 LEU A 110 1 5 HELIX 6 6 GLY A 118 SER A 130 1 13 HELIX 7 7 MET A 148 THR A 159 1 12 HELIX 8 8 GLY A 189 VAL A 195 1 7 HELIX 9 9 VAL A 195 ARG A 204 1 10 HELIX 10 10 PRO A 205 ILE A 210 5 6 HELIX 11 11 ARG A 222 THR A 226 1 5 HELIX 12 12 PRO A 232 TYR A 234 5 3 HELIX 13 13 GLY A 235 GLY A 249 1 15 HELIX 14 14 PRO A 267 ALA A 269 5 3 HELIX 15 15 GLU A 270 CYS A 286 1 17 HELIX 16 16 PRO A 322 ILE A 326 5 5 SHEET 1 A 9 TRP A 31 ASN A 32 0 SHEET 2 A 9 THR A 24 TRP A 25 -1 N THR A 24 O ASN A 32 SHEET 3 A 9 ILE A 253 VAL A 260 -1 O GLN A 255 N TRP A 25 SHEET 4 A 9 LEU A 165 ARG A 171 1 N ARG A 171 O GLY A 259 SHEET 5 A 9 TYR A 218 THR A 221 -1 O ALA A 219 N VAL A 166 SHEET 6 A 9 ILE A 134 PHE A 137 -1 N PHE A 137 O TYR A 218 SHEET 7 A 9 ILE A 50 ALA A 56 1 N VAL A 53 O VAL A 136 SHEET 8 A 9 GLU A 80 ASP A 85 1 O ILE A 82 N VAL A 52 SHEET 9 A 9 ARG A 102 SER A 105 1 O VAL A 104 N VAL A 83 SHEET 1 B 2 THR A 296 ALA A 300 0 SHEET 2 B 2 TYR A 308 THR A 312 -1 O HIS A 311 N GLN A 297 SITE 1 AC1 7 ARG A 17 PRO A 114 ARG A 116 TYR A 308 SITE 2 AC1 7 THR A 309 GLN A 310 ARG A 320 SITE 1 AC2 11 PRO A 55 ALA A 56 LEU A 57 GLU A 59 SITE 2 AC2 11 SER A 86 GLY A 118 LYS A 119 ASP A 139 SITE 3 AC2 11 SER A 140 ASP A 141 ARG A 266 SITE 1 AC3 2 GLY A 189 ARG A 190 SITE 1 AC4 3 GLY A 189 ARG A 190 THR A 192 CRYST1 86.967 86.967 103.932 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011499 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011499 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009622 0.00000