data_3CMD # _entry.id 3CMD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CMD pdb_00003cmd 10.2210/pdb3cmd/pdb RCSB RCSB046950 ? ? WWPDB D_1000046950 ? ? # _pdbx_database_status.entry_id 3CMD _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-03-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hwang, K.Y.' 1 'Nam, K.H.' 2 # _citation.id primary _citation.title ;Insight into the antibacterial drug design and architectural mechanism of peptide recognition from the E. faecium peptide deformylase structure. ; _citation.journal_abbrev Proteins _citation.journal_volume 74 _citation.page_first 261 _citation.page_last 265 _citation.year 2009 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18831047 _citation.pdbx_database_id_DOI 10.1002/prot.22257 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nam, K.H.' 1 ? primary 'Ham, J.I.' 2 ? primary 'Priyadarshi, A.' 3 ? primary 'Kim, E.E.' 4 ? primary 'Chung, N.' 5 ? primary 'Hwang, K.Y.' 6 ? # _cell.length_a 149.470 _cell.length_b 149.470 _cell.length_c 143.329 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 3CMD _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 64 2 2' _symmetry.entry_id 3CMD _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 181 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Peptide deformylase' 21774.832 2 3.5.1.88 ? ? ? 2 non-polymer syn 'FE (III) ION' 55.845 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 8 ? ? ? ? 4 non-polymer syn 'MALONATE ION' 102.046 4 ? ? ? ? 5 water nat water 18.015 207 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGLVPGRHMMITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKR IIAVHVPSPDPEADGPSLSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYE SIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE ; _entity_poly.pdbx_seq_one_letter_code_can ;SGLVPGRHMMITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKR IIAVHVPSPDPEADGPSLSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYE SIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 LEU n 1 4 VAL n 1 5 PRO n 1 6 GLY n 1 7 ARG n 1 8 HIS n 1 9 MET n 1 10 MET n 1 11 ILE n 1 12 THR n 1 13 MET n 1 14 ASP n 1 15 ASP n 1 16 ILE n 1 17 ILE n 1 18 ARG n 1 19 GLU n 1 20 GLY n 1 21 ASN n 1 22 PRO n 1 23 THR n 1 24 LEU n 1 25 ARG n 1 26 GLU n 1 27 VAL n 1 28 ALA n 1 29 LYS n 1 30 GLU n 1 31 VAL n 1 32 SER n 1 33 LEU n 1 34 PRO n 1 35 LEU n 1 36 SER n 1 37 GLU n 1 38 GLU n 1 39 ASP n 1 40 ILE n 1 41 SER n 1 42 LEU n 1 43 GLY n 1 44 LYS n 1 45 GLU n 1 46 MET n 1 47 LEU n 1 48 GLU n 1 49 PHE n 1 50 LEU n 1 51 LYS n 1 52 ASN n 1 53 SER n 1 54 GLN n 1 55 ASP n 1 56 PRO n 1 57 ILE n 1 58 LYS n 1 59 ALA n 1 60 GLU n 1 61 GLU n 1 62 LEU n 1 63 HIS n 1 64 LEU n 1 65 ARG n 1 66 GLY n 1 67 GLY n 1 68 VAL n 1 69 GLY n 1 70 LEU n 1 71 ALA n 1 72 ALA n 1 73 PRO n 1 74 GLN n 1 75 LEU n 1 76 ASP n 1 77 ILE n 1 78 SER n 1 79 LYS n 1 80 ARG n 1 81 ILE n 1 82 ILE n 1 83 ALA n 1 84 VAL n 1 85 HIS n 1 86 VAL n 1 87 PRO n 1 88 SER n 1 89 PRO n 1 90 ASP n 1 91 PRO n 1 92 GLU n 1 93 ALA n 1 94 ASP n 1 95 GLY n 1 96 PRO n 1 97 SER n 1 98 LEU n 1 99 SER n 1 100 THR n 1 101 VAL n 1 102 MET n 1 103 TYR n 1 104 ASN n 1 105 PRO n 1 106 LYS n 1 107 ILE n 1 108 LEU n 1 109 SER n 1 110 HIS n 1 111 SER n 1 112 VAL n 1 113 GLN n 1 114 ASP n 1 115 ALA n 1 116 CYS n 1 117 LEU n 1 118 GLY n 1 119 GLU n 1 120 GLY n 1 121 GLU n 1 122 GLY n 1 123 CYS n 1 124 LEU n 1 125 SER n 1 126 VAL n 1 127 ASP n 1 128 ARG n 1 129 GLU n 1 130 VAL n 1 131 PRO n 1 132 GLY n 1 133 TYR n 1 134 VAL n 1 135 VAL n 1 136 ARG n 1 137 HIS n 1 138 ALA n 1 139 LYS n 1 140 ILE n 1 141 THR n 1 142 VAL n 1 143 SER n 1 144 TYR n 1 145 TYR n 1 146 ASP n 1 147 MET n 1 148 ASN n 1 149 GLY n 1 150 GLU n 1 151 LYS n 1 152 HIS n 1 153 LYS n 1 154 ILE n 1 155 ARG n 1 156 LEU n 1 157 LYS n 1 158 ASN n 1 159 TYR n 1 160 GLU n 1 161 SER n 1 162 ILE n 1 163 VAL n 1 164 VAL n 1 165 GLN n 1 166 HIS n 1 167 GLU n 1 168 ILE n 1 169 ASP n 1 170 HIS n 1 171 ILE n 1 172 ASN n 1 173 GLY n 1 174 VAL n 1 175 MET n 1 176 PHE n 1 177 TYR n 1 178 ASP n 1 179 HIS n 1 180 ILE n 1 181 ASN n 1 182 ASP n 1 183 GLN n 1 184 ASN n 1 185 PRO n 1 186 PHE n 1 187 ALA n 1 188 LEU n 1 189 LYS n 1 190 GLU n 1 191 GLY n 1 192 VAL n 1 193 LEU n 1 194 VAL n 1 195 ILE n 1 196 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Streptococcus faecium' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterococcus faecium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1352 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q842S4_ENTFC _struct_ref.pdbx_db_accession Q842S4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPSP DPEADGPSLSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEID HINGVMFYDHINDQNPFALKEGVLVIE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CMD A 10 ? 196 ? Q842S4 1 ? 187 ? 1 187 2 1 3CMD B 10 ? 196 ? Q842S4 1 ? 187 ? 1 187 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CMD SER A 1 ? UNP Q842S4 ? ? 'expression tag' -8 1 1 3CMD GLY A 2 ? UNP Q842S4 ? ? 'expression tag' -7 2 1 3CMD LEU A 3 ? UNP Q842S4 ? ? 'expression tag' -6 3 1 3CMD VAL A 4 ? UNP Q842S4 ? ? 'expression tag' -5 4 1 3CMD PRO A 5 ? UNP Q842S4 ? ? 'expression tag' -4 5 1 3CMD GLY A 6 ? UNP Q842S4 ? ? 'expression tag' -3 6 1 3CMD ARG A 7 ? UNP Q842S4 ? ? 'expression tag' -2 7 1 3CMD HIS A 8 ? UNP Q842S4 ? ? 'expression tag' -1 8 1 3CMD MET A 9 ? UNP Q842S4 ? ? 'expression tag' 0 9 2 3CMD SER B 1 ? UNP Q842S4 ? ? 'expression tag' -8 10 2 3CMD GLY B 2 ? UNP Q842S4 ? ? 'expression tag' -7 11 2 3CMD LEU B 3 ? UNP Q842S4 ? ? 'expression tag' -6 12 2 3CMD VAL B 4 ? UNP Q842S4 ? ? 'expression tag' -5 13 2 3CMD PRO B 5 ? UNP Q842S4 ? ? 'expression tag' -4 14 2 3CMD GLY B 6 ? UNP Q842S4 ? ? 'expression tag' -3 15 2 3CMD ARG B 7 ? UNP Q842S4 ? ? 'expression tag' -2 16 2 3CMD HIS B 8 ? UNP Q842S4 ? ? 'expression tag' -1 17 2 3CMD MET B 9 ? UNP Q842S4 ? ? 'expression tag' 0 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FE non-polymer . 'FE (III) ION' ? 'Fe 3' 55.845 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLI non-polymer . 'MALONATE ION' ? 'C3 H2 O4 -2' 102.046 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3CMD _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 5.31 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 76.82 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'Na-malonate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2007-09-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PAL/PLS BEAMLINE 6C1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000 _diffrn_source.pdbx_synchrotron_site PAL/PLS _diffrn_source.pdbx_synchrotron_beamline 6C1 # _reflns.entry_id 3CMD _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 20 _reflns.number_all ? _reflns.number_obs 25754 _reflns.percent_possible_obs 75 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.121 _reflns.pdbx_netI_over_sigmaI 12.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 97.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_obs 3.45 _reflns_shell.pdbx_Rsym_value 0.304 _reflns_shell.pdbx_redundancy 6.5 _reflns_shell.number_unique_all 2518 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CMD _refine.ls_d_res_high 2.700 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 97.400 _refine.ls_number_reflns_obs 25752 _refine.ls_R_factor_R_work 0.200 _refine.ls_R_factor_R_free 0.229 _refine.ls_percent_reflns_R_free 9.600 _refine.ls_number_reflns_R_free 2537 _refine.B_iso_mean 21.323 _refine.solvent_model_param_bsol 17.617 _refine.aniso_B[1][1] 2.036 _refine.aniso_B[2][2] 2.036 _refine.aniso_B[3][3] -4.072 _refine.aniso_B[1][2] -8.373 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all 0.200 _refine.ls_R_factor_obs 0.200 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 'PDB ENTRY 1LM6' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Isotropic _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2930 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 38 _refine_hist.number_atoms_solvent 207 _refine_hist.number_atoms_total 3175 _refine_hist.d_res_high 2.700 _refine_hist.d_res_low 20.000 # _refine_ls_shell.d_res_high 2.7 _refine_ls_shell.d_res_low 20 _refine_ls_shell.number_reflns_obs 25752 _refine_ls_shell.number_reflns_R_free 2537 _refine_ls_shell.R_factor_R_work 0.200 _refine_ls_shell.R_factor_R_free 0.229 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein.param ? 'X-RAY DIFFRACTION' 2 dna-rna_rep.param ? 'X-RAY DIFFRACTION' 3 water_rep.param ? 'X-RAY DIFFRACTION' 4 ion.param ? 'X-RAY DIFFRACTION' 5 mli.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 3CMD _struct.title 'Crystal structure of peptide deformylase from VRE-E.faecium' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CMD _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'PDF, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 2 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 4 ? Q N N 5 ? R N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 12 ? ILE A 16 ? THR A 3 ILE A 7 5 ? 5 HELX_P HELX_P2 2 ASN A 21 ? GLU A 26 ? ASN A 12 GLU A 17 5 ? 6 HELX_P HELX_P3 3 SER A 36 ? ASP A 55 ? SER A 27 ASP A 46 1 ? 20 HELX_P HELX_P4 4 ASP A 55 ? LEU A 62 ? ASP A 46 LEU A 53 1 ? 8 HELX_P HELX_P5 5 PRO A 73 ? ASP A 76 ? PRO A 64 ASP A 67 5 ? 4 HELX_P HELX_P6 6 ASN A 158 ? ILE A 171 ? ASN A 149 ILE A 162 1 ? 14 HELX_P HELX_P7 7 MET A 175 ? ILE A 180 ? MET A 166 ILE A 171 5 ? 6 HELX_P HELX_P8 8 THR B 12 ? ILE B 16 ? THR B 3 ILE B 7 5 ? 5 HELX_P HELX_P9 9 ASN B 21 ? GLU B 26 ? ASN B 12 GLU B 17 5 ? 6 HELX_P HELX_P10 10 SER B 36 ? ASP B 55 ? SER B 27 ASP B 46 1 ? 20 HELX_P HELX_P11 11 ASP B 55 ? LEU B 62 ? ASP B 46 LEU B 53 1 ? 8 HELX_P HELX_P12 12 PRO B 73 ? ASP B 76 ? PRO B 64 ASP B 67 5 ? 4 HELX_P HELX_P13 13 ASN B 158 ? ILE B 171 ? ASN B 149 ILE B 162 1 ? 14 HELX_P HELX_P14 14 MET B 175 ? ILE B 180 ? MET B 166 ILE B 171 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 45 OE1 ? ? ? 1_555 E NA . NA ? ? A GLU 36 A NA 190 1_555 ? ? ? ? ? ? ? 2.977 ? ? metalc2 metalc ? ? A CYS 123 SG ? ? ? 1_555 C FE . FE ? ? A CYS 114 A FE 188 1_555 ? ? ? ? ? ? ? 2.261 ? ? metalc3 metalc ? ? A HIS 166 NE2 ? ? ? 1_555 C FE . FE ? ? A HIS 157 A FE 188 1_555 ? ? ? ? ? ? ? 2.513 ? ? metalc4 metalc ? ? A HIS 170 NE2 ? ? ? 1_555 C FE . FE ? ? A HIS 161 A FE 188 1_555 ? ? ? ? ? ? ? 2.398 ? ? metalc5 metalc ? ? D NA . NA ? ? ? 1_555 Q HOH . O ? ? A NA 189 A HOH 267 1_555 ? ? ? ? ? ? ? 2.863 ? ? metalc6 metalc ? ? E NA . NA ? ? ? 1_555 Q HOH . O ? ? A NA 190 A HOH 285 1_555 ? ? ? ? ? ? ? 2.936 ? ? metalc7 metalc ? ? B HIS 110 O ? ? ? 1_555 O NA . NA ? ? B HIS 101 B NA 194 1_555 ? ? ? ? ? ? ? 2.991 ? ? metalc8 metalc ? ? B CYS 123 SG ? ? ? 1_555 I FE . FE ? ? B CYS 114 B FE 188 1_555 ? ? ? ? ? ? ? 2.403 ? ? metalc9 metalc ? ? B HIS 166 NE2 ? ? ? 1_555 I FE . FE ? ? B HIS 157 B FE 188 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc10 metalc ? ? B HIS 170 NE2 ? ? ? 1_555 I FE . FE ? ? B HIS 161 B FE 188 1_555 ? ? ? ? ? ? ? 2.396 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 33 A . ? LEU 24 A PRO 34 A ? PRO 25 A 1 -0.03 2 LEU 33 B . ? LEU 24 B PRO 34 B ? PRO 25 B 1 -0.14 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 5 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 69 ? ALA A 71 ? GLY A 60 ALA A 62 A 2 ILE A 81 ? VAL A 86 ? ILE A 72 VAL A 77 A 3 LEU A 98 ? HIS A 110 ? LEU A 89 HIS A 101 A 4 LYS A 139 ? TYR A 145 ? LYS A 130 TYR A 136 A 5 LYS A 151 ? LYS A 157 ? LYS A 142 LYS A 148 B 1 ARG A 136 ? HIS A 137 ? ARG A 127 HIS A 128 B 2 ASP A 114 ? LEU A 117 ? ASP A 105 LEU A 108 B 3 LEU A 193 ? ILE A 195 ? LEU A 184 ILE A 186 B 4 ARG B 7 ? HIS B 8 ? ARG B -2 HIS B -1 C 1 GLY B 69 ? ALA B 71 ? GLY B 60 ALA B 62 C 2 ILE B 81 ? VAL B 86 ? ILE B 72 VAL B 77 C 3 LEU B 98 ? HIS B 110 ? LEU B 89 HIS B 101 C 4 LYS B 139 ? TYR B 145 ? LYS B 130 TYR B 136 C 5 LYS B 151 ? LYS B 157 ? LYS B 142 LYS B 148 D 1 ARG B 136 ? HIS B 137 ? ARG B 127 HIS B 128 D 2 ASP B 114 ? LEU B 117 ? ASP B 105 LEU B 108 D 3 LEU B 193 ? ILE B 195 ? LEU B 184 ILE B 186 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 70 ? N LEU A 61 O ALA A 83 ? O ALA A 74 A 2 3 N ILE A 82 ? N ILE A 73 O MET A 102 ? O MET A 93 A 3 4 N LEU A 108 ? N LEU A 99 O THR A 141 ? O THR A 132 A 4 5 N ILE A 140 ? N ILE A 131 O LEU A 156 ? O LEU A 147 B 1 2 O ARG A 136 ? O ARG A 127 N ALA A 115 ? N ALA A 106 B 2 3 N CYS A 116 ? N CYS A 107 O ILE A 195 ? O ILE A 186 B 3 4 N VAL A 194 ? N VAL A 185 O HIS B 8 ? O HIS B -1 C 1 2 N LEU B 70 ? N LEU B 61 O ALA B 83 ? O ALA B 74 C 2 3 N ILE B 82 ? N ILE B 73 O MET B 102 ? O MET B 93 C 3 4 N LEU B 108 ? N LEU B 99 O THR B 141 ? O THR B 132 C 4 5 N TYR B 144 ? N TYR B 135 O HIS B 152 ? O HIS B 143 D 1 2 O ARG B 136 ? O ARG B 127 N ALA B 115 ? N ALA B 106 D 2 3 N CYS B 116 ? N CYS B 107 O ILE B 195 ? O ILE B 186 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FE 188 ? 4 'BINDING SITE FOR RESIDUE FE A 188' AC2 Software B FE 188 ? 4 'BINDING SITE FOR RESIDUE FE B 188' AC3 Software A NA 189 ? 2 'BINDING SITE FOR RESIDUE NA A 189' AC4 Software B NA 190 ? 2 'BINDING SITE FOR RESIDUE NA B 190' AC5 Software B NA 191 ? 1 'BINDING SITE FOR RESIDUE NA B 191' AC6 Software B NA 192 ? 2 'BINDING SITE FOR RESIDUE NA B 192' AC7 Software B NA 193 ? 2 'BINDING SITE FOR RESIDUE NA B 193' AC8 Software B NA 194 ? 3 'BINDING SITE FOR RESIDUE NA B 194' AC9 Software A NA 190 ? 1 'BINDING SITE FOR RESIDUE NA A 190' BC1 Software A MLI 191 ? 9 'BINDING SITE FOR RESIDUE MLI A 191' BC2 Software B MLI 195 ? 7 'BINDING SITE FOR RESIDUE MLI B 195' BC3 Software A MLI 192 ? 5 'BINDING SITE FOR RESIDUE MLI A 192' BC4 Software A MLI 193 ? 3 'BINDING SITE FOR RESIDUE MLI A 193' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLN A 74 ? GLN A 65 . ? 1_555 ? 2 AC1 4 CYS A 123 ? CYS A 114 . ? 1_555 ? 3 AC1 4 HIS A 166 ? HIS A 157 . ? 1_555 ? 4 AC1 4 HIS A 170 ? HIS A 161 . ? 1_555 ? 5 AC2 4 GLN B 74 ? GLN B 65 . ? 1_555 ? 6 AC2 4 CYS B 123 ? CYS B 114 . ? 1_555 ? 7 AC2 4 HIS B 166 ? HIS B 157 . ? 1_555 ? 8 AC2 4 HIS B 170 ? HIS B 161 . ? 1_555 ? 9 AC3 2 GLY A 122 ? GLY A 113 . ? 1_555 ? 10 AC3 2 HIS A 166 ? HIS A 157 . ? 1_555 ? 11 AC4 2 LYS B 157 ? LYS B 148 . ? 1_555 ? 12 AC4 2 GLU B 160 ? GLU B 151 . ? 1_555 ? 13 AC5 1 GLY B 122 ? GLY B 113 . ? 1_555 ? 14 AC6 2 ASP A 14 ? ASP A 5 . ? 8_566 ? 15 AC6 2 GLU B 190 ? GLU B 181 . ? 1_555 ? 16 AC7 2 GLU B 19 ? GLU B 10 . ? 1_555 ? 17 AC7 2 TYR B 177 ? TYR B 168 . ? 1_555 ? 18 AC8 3 SER B 109 ? SER B 100 . ? 1_555 ? 19 AC8 3 HIS B 110 ? HIS B 101 . ? 1_555 ? 20 AC8 3 ARG B 155 ? ARG B 146 . ? 1_555 ? 21 AC9 1 GLU A 45 ? GLU A 36 . ? 1_555 ? 22 BC1 9 GLY A 67 ? GLY A 58 . ? 1_555 ? 23 BC1 9 GLY A 69 ? GLY A 60 . ? 1_555 ? 24 BC1 9 GLN A 74 ? GLN A 65 . ? 1_555 ? 25 BC1 9 GLY A 122 ? GLY A 113 . ? 1_555 ? 26 BC1 9 CYS A 123 ? CYS A 114 . ? 1_555 ? 27 BC1 9 LEU A 124 ? LEU A 115 . ? 1_555 ? 28 BC1 9 HIS A 166 ? HIS A 157 . ? 1_555 ? 29 BC1 9 GLU A 167 ? GLU A 158 . ? 1_555 ? 30 BC1 9 HIS A 170 ? HIS A 161 . ? 1_555 ? 31 BC2 7 GLY B 67 ? GLY B 58 . ? 1_555 ? 32 BC2 7 GLY B 69 ? GLY B 60 . ? 1_555 ? 33 BC2 7 GLN B 74 ? GLN B 65 . ? 1_555 ? 34 BC2 7 GLY B 122 ? GLY B 113 . ? 1_555 ? 35 BC2 7 CYS B 123 ? CYS B 114 . ? 1_555 ? 36 BC2 7 LEU B 124 ? LEU B 115 . ? 1_555 ? 37 BC2 7 GLU B 167 ? GLU B 158 . ? 1_555 ? 38 BC3 5 SER A 32 ? SER A 23 . ? 1_555 ? 39 BC3 5 ASP A 39 ? ASP A 30 . ? 1_555 ? 40 BC3 5 LYS A 79 ? LYS A 70 . ? 1_555 ? 41 BC3 5 LYS B 139 ? LYS B 130 . ? 2_665 ? 42 BC3 5 ARG B 155 ? ARG B 146 . ? 2_665 ? 43 BC4 3 GLU A 19 ? GLU A 10 . ? 1_555 ? 44 BC4 3 ARG A 25 ? ARG A 16 . ? 1_555 ? 45 BC4 3 TYR A 177 ? TYR A 168 . ? 1_555 ? # _atom_sites.entry_id 3CMD _atom_sites.fract_transf_matrix[1][1] 0.006690 _atom_sites.fract_transf_matrix[1][2] 0.003863 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007725 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006977 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -8 ? ? ? A . n A 1 2 GLY 2 -7 ? ? ? A . n A 1 3 LEU 3 -6 -6 LEU LEU A . n A 1 4 VAL 4 -5 -5 VAL VAL A . n A 1 5 PRO 5 -4 -4 PRO PRO A . n A 1 6 GLY 6 -3 -3 GLY GLY A . n A 1 7 ARG 7 -2 -2 ARG ARG A . n A 1 8 HIS 8 -1 -1 HIS HIS A . n A 1 9 MET 9 0 0 MET MET A . n A 1 10 MET 10 1 1 MET MET A . n A 1 11 ILE 11 2 2 ILE ILE A . n A 1 12 THR 12 3 3 THR THR A . n A 1 13 MET 13 4 4 MET MET A . n A 1 14 ASP 14 5 5 ASP ASP A . n A 1 15 ASP 15 6 6 ASP ASP A . n A 1 16 ILE 16 7 7 ILE ILE A . n A 1 17 ILE 17 8 8 ILE ILE A . n A 1 18 ARG 18 9 9 ARG ARG A . n A 1 19 GLU 19 10 10 GLU GLU A . n A 1 20 GLY 20 11 11 GLY GLY A . n A 1 21 ASN 21 12 12 ASN ASN A . n A 1 22 PRO 22 13 13 PRO PRO A . n A 1 23 THR 23 14 14 THR THR A . n A 1 24 LEU 24 15 15 LEU LEU A . n A 1 25 ARG 25 16 16 ARG ARG A . n A 1 26 GLU 26 17 17 GLU GLU A . n A 1 27 VAL 27 18 18 VAL VAL A . n A 1 28 ALA 28 19 19 ALA ALA A . n A 1 29 LYS 29 20 20 LYS LYS A . n A 1 30 GLU 30 21 21 GLU GLU A . n A 1 31 VAL 31 22 22 VAL VAL A . n A 1 32 SER 32 23 23 SER SER A . n A 1 33 LEU 33 24 24 LEU LEU A . n A 1 34 PRO 34 25 25 PRO PRO A . n A 1 35 LEU 35 26 26 LEU LEU A . n A 1 36 SER 36 27 27 SER SER A . n A 1 37 GLU 37 28 28 GLU GLU A . n A 1 38 GLU 38 29 29 GLU GLU A . n A 1 39 ASP 39 30 30 ASP ASP A . n A 1 40 ILE 40 31 31 ILE ILE A . n A 1 41 SER 41 32 32 SER SER A . n A 1 42 LEU 42 33 33 LEU LEU A . n A 1 43 GLY 43 34 34 GLY GLY A . n A 1 44 LYS 44 35 35 LYS LYS A . n A 1 45 GLU 45 36 36 GLU GLU A . n A 1 46 MET 46 37 37 MET MET A . n A 1 47 LEU 47 38 38 LEU LEU A . n A 1 48 GLU 48 39 39 GLU GLU A . n A 1 49 PHE 49 40 40 PHE PHE A . n A 1 50 LEU 50 41 41 LEU LEU A . n A 1 51 LYS 51 42 42 LYS LYS A . n A 1 52 ASN 52 43 43 ASN ASN A . n A 1 53 SER 53 44 44 SER SER A . n A 1 54 GLN 54 45 45 GLN GLN A . n A 1 55 ASP 55 46 46 ASP ASP A . n A 1 56 PRO 56 47 47 PRO PRO A . n A 1 57 ILE 57 48 48 ILE ILE A . n A 1 58 LYS 58 49 49 LYS LYS A . n A 1 59 ALA 59 50 50 ALA ALA A . n A 1 60 GLU 60 51 51 GLU GLU A . n A 1 61 GLU 61 52 52 GLU GLU A . n A 1 62 LEU 62 53 53 LEU LEU A . n A 1 63 HIS 63 54 54 HIS HIS A . n A 1 64 LEU 64 55 55 LEU LEU A . n A 1 65 ARG 65 56 56 ARG ARG A . n A 1 66 GLY 66 57 57 GLY GLY A . n A 1 67 GLY 67 58 58 GLY GLY A . n A 1 68 VAL 68 59 59 VAL VAL A . n A 1 69 GLY 69 60 60 GLY GLY A . n A 1 70 LEU 70 61 61 LEU LEU A . n A 1 71 ALA 71 62 62 ALA ALA A . n A 1 72 ALA 72 63 63 ALA ALA A . n A 1 73 PRO 73 64 64 PRO PRO A . n A 1 74 GLN 74 65 65 GLN GLN A . n A 1 75 LEU 75 66 66 LEU LEU A . n A 1 76 ASP 76 67 67 ASP ASP A . n A 1 77 ILE 77 68 68 ILE ILE A . n A 1 78 SER 78 69 69 SER SER A . n A 1 79 LYS 79 70 70 LYS LYS A . n A 1 80 ARG 80 71 71 ARG ARG A . n A 1 81 ILE 81 72 72 ILE ILE A . n A 1 82 ILE 82 73 73 ILE ILE A . n A 1 83 ALA 83 74 74 ALA ALA A . n A 1 84 VAL 84 75 75 VAL VAL A . n A 1 85 HIS 85 76 76 HIS HIS A . n A 1 86 VAL 86 77 77 VAL VAL A . n A 1 87 PRO 87 78 78 PRO PRO A . n A 1 88 SER 88 79 79 SER SER A . n A 1 89 PRO 89 80 ? ? ? A . n A 1 90 ASP 90 81 ? ? ? A . n A 1 91 PRO 91 82 ? ? ? A . n A 1 92 GLU 92 83 ? ? ? A . n A 1 93 ALA 93 84 ? ? ? A . n A 1 94 ASP 94 85 ? ? ? A . n A 1 95 GLY 95 86 ? ? ? A . n A 1 96 PRO 96 87 ? ? ? A . n A 1 97 SER 97 88 88 SER SER A . n A 1 98 LEU 98 89 89 LEU LEU A . n A 1 99 SER 99 90 90 SER SER A . n A 1 100 THR 100 91 91 THR THR A . n A 1 101 VAL 101 92 92 VAL VAL A . n A 1 102 MET 102 93 93 MET MET A . n A 1 103 TYR 103 94 94 TYR TYR A . n A 1 104 ASN 104 95 95 ASN ASN A . n A 1 105 PRO 105 96 96 PRO PRO A . n A 1 106 LYS 106 97 97 LYS LYS A . n A 1 107 ILE 107 98 98 ILE ILE A . n A 1 108 LEU 108 99 99 LEU LEU A . n A 1 109 SER 109 100 100 SER SER A . n A 1 110 HIS 110 101 101 HIS HIS A . n A 1 111 SER 111 102 102 SER SER A . n A 1 112 VAL 112 103 103 VAL VAL A . n A 1 113 GLN 113 104 104 GLN GLN A . n A 1 114 ASP 114 105 105 ASP ASP A . n A 1 115 ALA 115 106 106 ALA ALA A . n A 1 116 CYS 116 107 107 CYS CYS A . n A 1 117 LEU 117 108 108 LEU LEU A . n A 1 118 GLY 118 109 109 GLY GLY A . n A 1 119 GLU 119 110 110 GLU GLU A . n A 1 120 GLY 120 111 111 GLY GLY A . n A 1 121 GLU 121 112 112 GLU GLU A . n A 1 122 GLY 122 113 113 GLY GLY A . n A 1 123 CYS 123 114 114 CYS CYS A . n A 1 124 LEU 124 115 115 LEU LEU A . n A 1 125 SER 125 116 116 SER SER A . n A 1 126 VAL 126 117 117 VAL VAL A . n A 1 127 ASP 127 118 118 ASP ASP A . n A 1 128 ARG 128 119 119 ARG ARG A . n A 1 129 GLU 129 120 120 GLU GLU A . n A 1 130 VAL 130 121 121 VAL VAL A . n A 1 131 PRO 131 122 122 PRO PRO A . n A 1 132 GLY 132 123 123 GLY GLY A . n A 1 133 TYR 133 124 124 TYR TYR A . n A 1 134 VAL 134 125 125 VAL VAL A . n A 1 135 VAL 135 126 126 VAL VAL A . n A 1 136 ARG 136 127 127 ARG ARG A . n A 1 137 HIS 137 128 128 HIS HIS A . n A 1 138 ALA 138 129 129 ALA ALA A . n A 1 139 LYS 139 130 130 LYS LYS A . n A 1 140 ILE 140 131 131 ILE ILE A . n A 1 141 THR 141 132 132 THR THR A . n A 1 142 VAL 142 133 133 VAL VAL A . n A 1 143 SER 143 134 134 SER SER A . n A 1 144 TYR 144 135 135 TYR TYR A . n A 1 145 TYR 145 136 136 TYR TYR A . n A 1 146 ASP 146 137 137 ASP ASP A . n A 1 147 MET 147 138 138 MET MET A . n A 1 148 ASN 148 139 139 ASN ASN A . n A 1 149 GLY 149 140 140 GLY GLY A . n A 1 150 GLU 150 141 141 GLU GLU A . n A 1 151 LYS 151 142 142 LYS LYS A . n A 1 152 HIS 152 143 143 HIS HIS A . n A 1 153 LYS 153 144 144 LYS LYS A . n A 1 154 ILE 154 145 145 ILE ILE A . n A 1 155 ARG 155 146 146 ARG ARG A . n A 1 156 LEU 156 147 147 LEU LEU A . n A 1 157 LYS 157 148 148 LYS LYS A . n A 1 158 ASN 158 149 149 ASN ASN A . n A 1 159 TYR 159 150 150 TYR TYR A . n A 1 160 GLU 160 151 151 GLU GLU A . n A 1 161 SER 161 152 152 SER SER A . n A 1 162 ILE 162 153 153 ILE ILE A . n A 1 163 VAL 163 154 154 VAL VAL A . n A 1 164 VAL 164 155 155 VAL VAL A . n A 1 165 GLN 165 156 156 GLN GLN A . n A 1 166 HIS 166 157 157 HIS HIS A . n A 1 167 GLU 167 158 158 GLU GLU A . n A 1 168 ILE 168 159 159 ILE ILE A . n A 1 169 ASP 169 160 160 ASP ASP A . n A 1 170 HIS 170 161 161 HIS HIS A . n A 1 171 ILE 171 162 162 ILE ILE A . n A 1 172 ASN 172 163 163 ASN ASN A . n A 1 173 GLY 173 164 164 GLY GLY A . n A 1 174 VAL 174 165 165 VAL VAL A . n A 1 175 MET 175 166 166 MET MET A . n A 1 176 PHE 176 167 167 PHE PHE A . n A 1 177 TYR 177 168 168 TYR TYR A . n A 1 178 ASP 178 169 169 ASP ASP A . n A 1 179 HIS 179 170 170 HIS HIS A . n A 1 180 ILE 180 171 171 ILE ILE A . n A 1 181 ASN 181 172 172 ASN ASN A . n A 1 182 ASP 182 173 173 ASP ASP A . n A 1 183 GLN 183 174 174 GLN GLN A . n A 1 184 ASN 184 175 175 ASN ASN A . n A 1 185 PRO 185 176 176 PRO PRO A . n A 1 186 PHE 186 177 177 PHE PHE A . n A 1 187 ALA 187 178 178 ALA ALA A . n A 1 188 LEU 188 179 179 LEU LEU A . n A 1 189 LYS 189 180 180 LYS LYS A . n A 1 190 GLU 190 181 181 GLU GLU A . n A 1 191 GLY 191 182 182 GLY GLY A . n A 1 192 VAL 192 183 183 VAL VAL A . n A 1 193 LEU 193 184 184 LEU LEU A . n A 1 194 VAL 194 185 185 VAL VAL A . n A 1 195 ILE 195 186 186 ILE ILE A . n A 1 196 GLU 196 187 187 GLU GLU A . n B 1 1 SER 1 -8 -8 SER SER B . n B 1 2 GLY 2 -7 -7 GLY GLY B . n B 1 3 LEU 3 -6 -6 LEU LEU B . n B 1 4 VAL 4 -5 -5 VAL VAL B . n B 1 5 PRO 5 -4 -4 PRO PRO B . n B 1 6 GLY 6 -3 -3 GLY GLY B . n B 1 7 ARG 7 -2 -2 ARG ARG B . n B 1 8 HIS 8 -1 -1 HIS HIS B . n B 1 9 MET 9 0 0 MET MET B . n B 1 10 MET 10 1 1 MET MET B . n B 1 11 ILE 11 2 2 ILE ILE B . n B 1 12 THR 12 3 3 THR THR B . n B 1 13 MET 13 4 4 MET MET B . n B 1 14 ASP 14 5 5 ASP ASP B . n B 1 15 ASP 15 6 6 ASP ASP B . n B 1 16 ILE 16 7 7 ILE ILE B . n B 1 17 ILE 17 8 8 ILE ILE B . n B 1 18 ARG 18 9 9 ARG ARG B . n B 1 19 GLU 19 10 10 GLU GLU B . n B 1 20 GLY 20 11 11 GLY GLY B . n B 1 21 ASN 21 12 12 ASN ASN B . n B 1 22 PRO 22 13 13 PRO PRO B . n B 1 23 THR 23 14 14 THR THR B . n B 1 24 LEU 24 15 15 LEU LEU B . n B 1 25 ARG 25 16 16 ARG ARG B . n B 1 26 GLU 26 17 17 GLU GLU B . n B 1 27 VAL 27 18 18 VAL VAL B . n B 1 28 ALA 28 19 19 ALA ALA B . n B 1 29 LYS 29 20 20 LYS LYS B . n B 1 30 GLU 30 21 21 GLU GLU B . n B 1 31 VAL 31 22 22 VAL VAL B . n B 1 32 SER 32 23 23 SER SER B . n B 1 33 LEU 33 24 24 LEU LEU B . n B 1 34 PRO 34 25 25 PRO PRO B . n B 1 35 LEU 35 26 26 LEU LEU B . n B 1 36 SER 36 27 27 SER SER B . n B 1 37 GLU 37 28 28 GLU GLU B . n B 1 38 GLU 38 29 29 GLU GLU B . n B 1 39 ASP 39 30 30 ASP ASP B . n B 1 40 ILE 40 31 31 ILE ILE B . n B 1 41 SER 41 32 32 SER SER B . n B 1 42 LEU 42 33 33 LEU LEU B . n B 1 43 GLY 43 34 34 GLY GLY B . n B 1 44 LYS 44 35 35 LYS LYS B . n B 1 45 GLU 45 36 36 GLU GLU B . n B 1 46 MET 46 37 37 MET MET B . n B 1 47 LEU 47 38 38 LEU LEU B . n B 1 48 GLU 48 39 39 GLU GLU B . n B 1 49 PHE 49 40 40 PHE PHE B . n B 1 50 LEU 50 41 41 LEU LEU B . n B 1 51 LYS 51 42 42 LYS LYS B . n B 1 52 ASN 52 43 43 ASN ASN B . n B 1 53 SER 53 44 44 SER SER B . n B 1 54 GLN 54 45 45 GLN GLN B . n B 1 55 ASP 55 46 46 ASP ASP B . n B 1 56 PRO 56 47 47 PRO PRO B . n B 1 57 ILE 57 48 48 ILE ILE B . n B 1 58 LYS 58 49 49 LYS LYS B . n B 1 59 ALA 59 50 50 ALA ALA B . n B 1 60 GLU 60 51 51 GLU GLU B . n B 1 61 GLU 61 52 52 GLU GLU B . n B 1 62 LEU 62 53 53 LEU LEU B . n B 1 63 HIS 63 54 54 HIS HIS B . n B 1 64 LEU 64 55 55 LEU LEU B . n B 1 65 ARG 65 56 56 ARG ARG B . n B 1 66 GLY 66 57 57 GLY GLY B . n B 1 67 GLY 67 58 58 GLY GLY B . n B 1 68 VAL 68 59 59 VAL VAL B . n B 1 69 GLY 69 60 60 GLY GLY B . n B 1 70 LEU 70 61 61 LEU LEU B . n B 1 71 ALA 71 62 62 ALA ALA B . n B 1 72 ALA 72 63 63 ALA ALA B . n B 1 73 PRO 73 64 64 PRO PRO B . n B 1 74 GLN 74 65 65 GLN GLN B . n B 1 75 LEU 75 66 66 LEU LEU B . n B 1 76 ASP 76 67 67 ASP ASP B . n B 1 77 ILE 77 68 68 ILE ILE B . n B 1 78 SER 78 69 69 SER SER B . n B 1 79 LYS 79 70 70 LYS LYS B . n B 1 80 ARG 80 71 71 ARG ARG B . n B 1 81 ILE 81 72 72 ILE ILE B . n B 1 82 ILE 82 73 73 ILE ILE B . n B 1 83 ALA 83 74 74 ALA ALA B . n B 1 84 VAL 84 75 75 VAL VAL B . n B 1 85 HIS 85 76 76 HIS HIS B . n B 1 86 VAL 86 77 77 VAL VAL B . n B 1 87 PRO 87 78 78 PRO PRO B . n B 1 88 SER 88 79 79 SER SER B . n B 1 89 PRO 89 80 ? ? ? B . n B 1 90 ASP 90 81 ? ? ? B . n B 1 91 PRO 91 82 ? ? ? B . n B 1 92 GLU 92 83 ? ? ? B . n B 1 93 ALA 93 84 ? ? ? B . n B 1 94 ASP 94 85 ? ? ? B . n B 1 95 GLY 95 86 ? ? ? B . n B 1 96 PRO 96 87 ? ? ? B . n B 1 97 SER 97 88 88 SER SER B . n B 1 98 LEU 98 89 89 LEU LEU B . n B 1 99 SER 99 90 90 SER SER B . n B 1 100 THR 100 91 91 THR THR B . n B 1 101 VAL 101 92 92 VAL VAL B . n B 1 102 MET 102 93 93 MET MET B . n B 1 103 TYR 103 94 94 TYR TYR B . n B 1 104 ASN 104 95 95 ASN ASN B . n B 1 105 PRO 105 96 96 PRO PRO B . n B 1 106 LYS 106 97 97 LYS LYS B . n B 1 107 ILE 107 98 98 ILE ILE B . n B 1 108 LEU 108 99 99 LEU LEU B . n B 1 109 SER 109 100 100 SER SER B . n B 1 110 HIS 110 101 101 HIS HIS B . n B 1 111 SER 111 102 102 SER SER B . n B 1 112 VAL 112 103 103 VAL VAL B . n B 1 113 GLN 113 104 104 GLN GLN B . n B 1 114 ASP 114 105 105 ASP ASP B . n B 1 115 ALA 115 106 106 ALA ALA B . n B 1 116 CYS 116 107 107 CYS CYS B . n B 1 117 LEU 117 108 108 LEU LEU B . n B 1 118 GLY 118 109 109 GLY GLY B . n B 1 119 GLU 119 110 110 GLU GLU B . n B 1 120 GLY 120 111 111 GLY GLY B . n B 1 121 GLU 121 112 112 GLU GLU B . n B 1 122 GLY 122 113 113 GLY GLY B . n B 1 123 CYS 123 114 114 CYS CYS B . n B 1 124 LEU 124 115 115 LEU LEU B . n B 1 125 SER 125 116 116 SER SER B . n B 1 126 VAL 126 117 117 VAL VAL B . n B 1 127 ASP 127 118 118 ASP ASP B . n B 1 128 ARG 128 119 119 ARG ARG B . n B 1 129 GLU 129 120 120 GLU GLU B . n B 1 130 VAL 130 121 121 VAL VAL B . n B 1 131 PRO 131 122 122 PRO PRO B . n B 1 132 GLY 132 123 123 GLY GLY B . n B 1 133 TYR 133 124 124 TYR TYR B . n B 1 134 VAL 134 125 125 VAL VAL B . n B 1 135 VAL 135 126 126 VAL VAL B . n B 1 136 ARG 136 127 127 ARG ARG B . n B 1 137 HIS 137 128 128 HIS HIS B . n B 1 138 ALA 138 129 129 ALA ALA B . n B 1 139 LYS 139 130 130 LYS LYS B . n B 1 140 ILE 140 131 131 ILE ILE B . n B 1 141 THR 141 132 132 THR THR B . n B 1 142 VAL 142 133 133 VAL VAL B . n B 1 143 SER 143 134 134 SER SER B . n B 1 144 TYR 144 135 135 TYR TYR B . n B 1 145 TYR 145 136 136 TYR TYR B . n B 1 146 ASP 146 137 137 ASP ASP B . n B 1 147 MET 147 138 138 MET MET B . n B 1 148 ASN 148 139 139 ASN ASN B . n B 1 149 GLY 149 140 140 GLY GLY B . n B 1 150 GLU 150 141 141 GLU GLU B . n B 1 151 LYS 151 142 142 LYS LYS B . n B 1 152 HIS 152 143 143 HIS HIS B . n B 1 153 LYS 153 144 144 LYS LYS B . n B 1 154 ILE 154 145 145 ILE ILE B . n B 1 155 ARG 155 146 146 ARG ARG B . n B 1 156 LEU 156 147 147 LEU LEU B . n B 1 157 LYS 157 148 148 LYS LYS B . n B 1 158 ASN 158 149 149 ASN ASN B . n B 1 159 TYR 159 150 150 TYR TYR B . n B 1 160 GLU 160 151 151 GLU GLU B . n B 1 161 SER 161 152 152 SER SER B . n B 1 162 ILE 162 153 153 ILE ILE B . n B 1 163 VAL 163 154 154 VAL VAL B . n B 1 164 VAL 164 155 155 VAL VAL B . n B 1 165 GLN 165 156 156 GLN GLN B . n B 1 166 HIS 166 157 157 HIS HIS B . n B 1 167 GLU 167 158 158 GLU GLU B . n B 1 168 ILE 168 159 159 ILE ILE B . n B 1 169 ASP 169 160 160 ASP ASP B . n B 1 170 HIS 170 161 161 HIS HIS B . n B 1 171 ILE 171 162 162 ILE ILE B . n B 1 172 ASN 172 163 163 ASN ASN B . n B 1 173 GLY 173 164 164 GLY GLY B . n B 1 174 VAL 174 165 165 VAL VAL B . n B 1 175 MET 175 166 166 MET MET B . n B 1 176 PHE 176 167 167 PHE PHE B . n B 1 177 TYR 177 168 168 TYR TYR B . n B 1 178 ASP 178 169 169 ASP ASP B . n B 1 179 HIS 179 170 170 HIS HIS B . n B 1 180 ILE 180 171 171 ILE ILE B . n B 1 181 ASN 181 172 172 ASN ASN B . n B 1 182 ASP 182 173 173 ASP ASP B . n B 1 183 GLN 183 174 174 GLN GLN B . n B 1 184 ASN 184 175 175 ASN ASN B . n B 1 185 PRO 185 176 176 PRO PRO B . n B 1 186 PHE 186 177 177 PHE PHE B . n B 1 187 ALA 187 178 178 ALA ALA B . n B 1 188 LEU 188 179 179 LEU LEU B . n B 1 189 LYS 189 180 180 LYS LYS B . n B 1 190 GLU 190 181 181 GLU GLU B . n B 1 191 GLY 191 182 182 GLY GLY B . n B 1 192 VAL 192 183 183 VAL VAL B . n B 1 193 LEU 193 184 184 LEU LEU B . n B 1 194 VAL 194 185 185 VAL VAL B . n B 1 195 ILE 195 186 186 ILE ILE B . n B 1 196 GLU 196 187 187 GLU GLU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE 1 188 1 FE FE A . D 3 NA 1 189 1 NA NA A . E 3 NA 1 190 8 NA NA A . F 4 MLI 1 191 1 MLI MLI A . G 4 MLI 1 192 3 MLI MLI A . H 4 MLI 1 193 4 MLI MLI A . I 2 FE 1 188 2 FE FE B . J 3 NA 1 189 2 NA NA B . K 3 NA 1 190 3 NA NA B . L 3 NA 1 191 4 NA NA B . M 3 NA 1 192 5 NA NA B . N 3 NA 1 193 6 NA NA B . O 3 NA 1 194 7 NA NA B . P 4 MLI 1 195 2 MLI MLI B . Q 5 HOH 1 194 2 HOH HOH A . Q 5 HOH 2 195 9 HOH HOH A . Q 5 HOH 3 196 10 HOH HOH A . Q 5 HOH 4 197 11 HOH HOH A . Q 5 HOH 5 198 12 HOH HOH A . Q 5 HOH 6 199 18 HOH HOH A . Q 5 HOH 7 200 19 HOH HOH A . Q 5 HOH 8 201 20 HOH HOH A . Q 5 HOH 9 202 23 HOH HOH A . Q 5 HOH 10 203 24 HOH HOH A . Q 5 HOH 11 204 26 HOH HOH A . Q 5 HOH 12 205 33 HOH HOH A . Q 5 HOH 13 206 34 HOH HOH A . Q 5 HOH 14 207 35 HOH HOH A . Q 5 HOH 15 208 36 HOH HOH A . Q 5 HOH 16 209 39 HOH HOH A . Q 5 HOH 17 210 40 HOH HOH A . Q 5 HOH 18 211 43 HOH HOH A . Q 5 HOH 19 212 45 HOH HOH A . Q 5 HOH 20 213 47 HOH HOH A . Q 5 HOH 21 214 50 HOH HOH A . Q 5 HOH 22 215 51 HOH HOH A . Q 5 HOH 23 216 53 HOH HOH A . Q 5 HOH 24 217 54 HOH HOH A . Q 5 HOH 25 218 55 HOH HOH A . Q 5 HOH 26 219 59 HOH HOH A . Q 5 HOH 27 220 60 HOH HOH A . Q 5 HOH 28 221 61 HOH HOH A . Q 5 HOH 29 222 62 HOH HOH A . Q 5 HOH 30 223 64 HOH HOH A . Q 5 HOH 31 224 68 HOH HOH A . Q 5 HOH 32 225 71 HOH HOH A . Q 5 HOH 33 226 72 HOH HOH A . Q 5 HOH 34 227 74 HOH HOH A . Q 5 HOH 35 228 75 HOH HOH A . Q 5 HOH 36 229 81 HOH HOH A . Q 5 HOH 37 230 82 HOH HOH A . Q 5 HOH 38 231 84 HOH HOH A . Q 5 HOH 39 232 86 HOH HOH A . Q 5 HOH 40 233 88 HOH HOH A . Q 5 HOH 41 234 92 HOH HOH A . Q 5 HOH 42 235 93 HOH HOH A . Q 5 HOH 43 236 94 HOH HOH A . Q 5 HOH 44 237 95 HOH HOH A . Q 5 HOH 45 238 100 HOH HOH A . Q 5 HOH 46 239 101 HOH HOH A . Q 5 HOH 47 240 105 HOH HOH A . Q 5 HOH 48 241 108 HOH HOH A . Q 5 HOH 49 242 109 HOH HOH A . Q 5 HOH 50 243 112 HOH HOH A . Q 5 HOH 51 244 114 HOH HOH A . Q 5 HOH 52 245 115 HOH HOH A . Q 5 HOH 53 246 116 HOH HOH A . Q 5 HOH 54 247 117 HOH HOH A . Q 5 HOH 55 248 118 HOH HOH A . Q 5 HOH 56 249 120 HOH HOH A . Q 5 HOH 57 250 121 HOH HOH A . Q 5 HOH 58 251 122 HOH HOH A . Q 5 HOH 59 252 123 HOH HOH A . Q 5 HOH 60 253 125 HOH HOH A . Q 5 HOH 61 254 128 HOH HOH A . Q 5 HOH 62 255 133 HOH HOH A . Q 5 HOH 63 256 134 HOH HOH A . Q 5 HOH 64 257 136 HOH HOH A . Q 5 HOH 65 258 138 HOH HOH A . Q 5 HOH 66 259 139 HOH HOH A . Q 5 HOH 67 260 140 HOH HOH A . Q 5 HOH 68 261 143 HOH HOH A . Q 5 HOH 69 262 144 HOH HOH A . Q 5 HOH 70 263 149 HOH HOH A . Q 5 HOH 71 264 150 HOH HOH A . Q 5 HOH 72 265 152 HOH HOH A . Q 5 HOH 73 266 154 HOH HOH A . Q 5 HOH 74 267 155 HOH HOH A . Q 5 HOH 75 268 156 HOH HOH A . Q 5 HOH 76 269 159 HOH HOH A . Q 5 HOH 77 270 160 HOH HOH A . Q 5 HOH 78 271 164 HOH HOH A . Q 5 HOH 79 272 165 HOH HOH A . Q 5 HOH 80 273 166 HOH HOH A . Q 5 HOH 81 274 167 HOH HOH A . Q 5 HOH 82 275 168 HOH HOH A . Q 5 HOH 83 276 169 HOH HOH A . Q 5 HOH 84 277 170 HOH HOH A . Q 5 HOH 85 278 173 HOH HOH A . Q 5 HOH 86 279 174 HOH HOH A . Q 5 HOH 87 280 175 HOH HOH A . Q 5 HOH 88 281 177 HOH HOH A . Q 5 HOH 89 282 178 HOH HOH A . Q 5 HOH 90 283 179 HOH HOH A . Q 5 HOH 91 284 181 HOH HOH A . Q 5 HOH 92 285 186 HOH HOH A . Q 5 HOH 93 286 188 HOH HOH A . Q 5 HOH 94 287 189 HOH HOH A . Q 5 HOH 95 288 193 HOH HOH A . Q 5 HOH 96 289 194 HOH HOH A . Q 5 HOH 97 290 195 HOH HOH A . Q 5 HOH 98 291 196 HOH HOH A . Q 5 HOH 99 292 197 HOH HOH A . Q 5 HOH 100 293 198 HOH HOH A . Q 5 HOH 101 294 199 HOH HOH A . Q 5 HOH 102 295 210 HOH HOH A . Q 5 HOH 103 296 211 HOH HOH A . Q 5 HOH 104 297 212 HOH HOH A . Q 5 HOH 105 298 213 HOH HOH A . R 5 HOH 1 196 5 HOH HOH B . R 5 HOH 2 197 8 HOH HOH B . R 5 HOH 3 198 13 HOH HOH B . R 5 HOH 4 199 14 HOH HOH B . R 5 HOH 5 200 15 HOH HOH B . R 5 HOH 6 201 16 HOH HOH B . R 5 HOH 7 202 17 HOH HOH B . R 5 HOH 8 203 21 HOH HOH B . R 5 HOH 9 204 22 HOH HOH B . R 5 HOH 10 205 25 HOH HOH B . R 5 HOH 11 206 27 HOH HOH B . R 5 HOH 12 207 28 HOH HOH B . R 5 HOH 13 208 29 HOH HOH B . R 5 HOH 14 209 30 HOH HOH B . R 5 HOH 15 210 31 HOH HOH B . R 5 HOH 16 211 32 HOH HOH B . R 5 HOH 17 212 37 HOH HOH B . R 5 HOH 18 213 38 HOH HOH B . R 5 HOH 19 214 41 HOH HOH B . R 5 HOH 20 215 42 HOH HOH B . R 5 HOH 21 216 44 HOH HOH B . R 5 HOH 22 217 46 HOH HOH B . R 5 HOH 23 218 48 HOH HOH B . R 5 HOH 24 219 49 HOH HOH B . R 5 HOH 25 220 52 HOH HOH B . R 5 HOH 26 221 56 HOH HOH B . R 5 HOH 27 222 57 HOH HOH B . R 5 HOH 28 223 58 HOH HOH B . R 5 HOH 29 224 63 HOH HOH B . R 5 HOH 30 225 65 HOH HOH B . R 5 HOH 31 226 66 HOH HOH B . R 5 HOH 32 227 67 HOH HOH B . R 5 HOH 33 228 69 HOH HOH B . R 5 HOH 34 229 70 HOH HOH B . R 5 HOH 35 230 73 HOH HOH B . R 5 HOH 36 231 76 HOH HOH B . R 5 HOH 37 232 77 HOH HOH B . R 5 HOH 38 233 78 HOH HOH B . R 5 HOH 39 234 79 HOH HOH B . R 5 HOH 40 235 80 HOH HOH B . R 5 HOH 41 236 83 HOH HOH B . R 5 HOH 42 237 85 HOH HOH B . R 5 HOH 43 238 87 HOH HOH B . R 5 HOH 44 239 89 HOH HOH B . R 5 HOH 45 240 90 HOH HOH B . R 5 HOH 46 241 91 HOH HOH B . R 5 HOH 47 242 96 HOH HOH B . R 5 HOH 48 243 97 HOH HOH B . R 5 HOH 49 244 98 HOH HOH B . R 5 HOH 50 245 99 HOH HOH B . R 5 HOH 51 246 102 HOH HOH B . R 5 HOH 52 247 103 HOH HOH B . R 5 HOH 53 248 104 HOH HOH B . R 5 HOH 54 249 106 HOH HOH B . R 5 HOH 55 250 107 HOH HOH B . R 5 HOH 56 251 110 HOH HOH B . R 5 HOH 57 252 111 HOH HOH B . R 5 HOH 58 253 113 HOH HOH B . R 5 HOH 59 254 119 HOH HOH B . R 5 HOH 60 255 124 HOH HOH B . R 5 HOH 61 256 126 HOH HOH B . R 5 HOH 62 257 127 HOH HOH B . R 5 HOH 63 258 129 HOH HOH B . R 5 HOH 64 259 130 HOH HOH B . R 5 HOH 65 260 131 HOH HOH B . R 5 HOH 66 261 132 HOH HOH B . R 5 HOH 67 262 135 HOH HOH B . R 5 HOH 68 263 137 HOH HOH B . R 5 HOH 69 264 141 HOH HOH B . R 5 HOH 70 265 142 HOH HOH B . R 5 HOH 71 266 145 HOH HOH B . R 5 HOH 72 267 146 HOH HOH B . R 5 HOH 73 268 147 HOH HOH B . R 5 HOH 74 269 148 HOH HOH B . R 5 HOH 75 270 151 HOH HOH B . R 5 HOH 76 271 153 HOH HOH B . R 5 HOH 77 272 157 HOH HOH B . R 5 HOH 78 273 158 HOH HOH B . R 5 HOH 79 274 161 HOH HOH B . R 5 HOH 80 275 162 HOH HOH B . R 5 HOH 81 276 163 HOH HOH B . R 5 HOH 82 277 171 HOH HOH B . R 5 HOH 83 278 172 HOH HOH B . R 5 HOH 84 279 176 HOH HOH B . R 5 HOH 85 280 180 HOH HOH B . R 5 HOH 86 281 182 HOH HOH B . R 5 HOH 87 282 183 HOH HOH B . R 5 HOH 88 283 184 HOH HOH B . R 5 HOH 89 284 185 HOH HOH B . R 5 HOH 90 285 214 HOH HOH B . R 5 HOH 91 286 215 HOH HOH B . R 5 HOH 92 287 216 HOH HOH B . R 5 HOH 93 288 217 HOH HOH B . R 5 HOH 94 289 218 HOH HOH B . R 5 HOH 95 290 220 HOH HOH B . R 5 HOH 96 291 221 HOH HOH B . R 5 HOH 97 292 222 HOH HOH B . R 5 HOH 98 293 223 HOH HOH B . R 5 HOH 99 294 224 HOH HOH B . R 5 HOH 100 295 225 HOH HOH B . R 5 HOH 101 296 226 HOH HOH B . R 5 HOH 102 297 227 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,Q 2 1 B,I,J,K,L,M,N,O,P,R # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 45 ? A GLU 36 ? 1_555 NA ? E NA . ? A NA 190 ? 1_555 O ? Q HOH . ? A HOH 285 ? 1_555 78.0 ? 2 SG ? A CYS 123 ? A CYS 114 ? 1_555 FE ? C FE . ? A FE 188 ? 1_555 NE2 ? A HIS 166 ? A HIS 157 ? 1_555 130.9 ? 3 SG ? A CYS 123 ? A CYS 114 ? 1_555 FE ? C FE . ? A FE 188 ? 1_555 NE2 ? A HIS 170 ? A HIS 161 ? 1_555 111.5 ? 4 NE2 ? A HIS 166 ? A HIS 157 ? 1_555 FE ? C FE . ? A FE 188 ? 1_555 NE2 ? A HIS 170 ? A HIS 161 ? 1_555 95.5 ? 5 SG ? B CYS 123 ? B CYS 114 ? 1_555 FE ? I FE . ? B FE 188 ? 1_555 NE2 ? B HIS 166 ? B HIS 157 ? 1_555 115.4 ? 6 SG ? B CYS 123 ? B CYS 114 ? 1_555 FE ? I FE . ? B FE 188 ? 1_555 NE2 ? B HIS 170 ? B HIS 161 ? 1_555 102.7 ? 7 NE2 ? B HIS 166 ? B HIS 157 ? 1_555 FE ? I FE . ? B FE 188 ? 1_555 NE2 ? B HIS 170 ? B HIS 161 ? 1_555 103.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-13 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-11-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.pdbx_dist_value' 4 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 6 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 12 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 3 'Structure model' '_struct_ref_seq_dif.details' 18 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 1 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 5 MOLREP 'within the CCP4 program suite' ? ? ? ? phasing ? ? ? 6 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 C _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 -5 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 -4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CA _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 -4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 129.26 _pdbx_validate_rmsd_angle.angle_target_value 119.30 _pdbx_validate_rmsd_angle.angle_deviation 9.96 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.50 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A -4 ? ? -44.54 -117.58 2 1 TYR A 135 ? ? -170.71 -175.17 3 1 ASN A 149 ? ? 48.91 -127.14 4 1 PRO B -4 ? ? -75.71 -80.98 5 1 PRO B 78 ? ? -72.73 -168.95 6 1 CYS B 114 ? ? -164.63 108.75 7 1 ASN B 149 ? ? 52.81 -136.07 8 1 VAL B 183 ? ? -35.26 123.89 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -8 ? A SER 1 2 1 Y 1 A GLY -7 ? A GLY 2 3 1 Y 1 A PRO 80 ? A PRO 89 4 1 Y 1 A ASP 81 ? A ASP 90 5 1 Y 1 A PRO 82 ? A PRO 91 6 1 Y 1 A GLU 83 ? A GLU 92 7 1 Y 1 A ALA 84 ? A ALA 93 8 1 Y 1 A ASP 85 ? A ASP 94 9 1 Y 1 A GLY 86 ? A GLY 95 10 1 Y 1 A PRO 87 ? A PRO 96 11 1 Y 1 B PRO 80 ? B PRO 89 12 1 Y 1 B ASP 81 ? B ASP 90 13 1 Y 1 B PRO 82 ? B PRO 91 14 1 Y 1 B GLU 83 ? B GLU 92 15 1 Y 1 B ALA 84 ? B ALA 93 16 1 Y 1 B ASP 85 ? B ASP 94 17 1 Y 1 B GLY 86 ? B GLY 95 18 1 Y 1 B PRO 87 ? B PRO 96 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FE FE FE N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 MLI C1 C N N 251 MLI C2 C N N 252 MLI C3 C N N 253 MLI O6 O N N 254 MLI O7 O N N 255 MLI O8 O N N 256 MLI O9 O N N 257 MLI H11 H N N 258 MLI H12 H N N 259 NA NA NA N N 260 PHE N N N N 261 PHE CA C N S 262 PHE C C N N 263 PHE O O N N 264 PHE CB C N N 265 PHE CG C Y N 266 PHE CD1 C Y N 267 PHE CD2 C Y N 268 PHE CE1 C Y N 269 PHE CE2 C Y N 270 PHE CZ C Y N 271 PHE OXT O N N 272 PHE H H N N 273 PHE H2 H N N 274 PHE HA H N N 275 PHE HB2 H N N 276 PHE HB3 H N N 277 PHE HD1 H N N 278 PHE HD2 H N N 279 PHE HE1 H N N 280 PHE HE2 H N N 281 PHE HZ H N N 282 PHE HXT H N N 283 PRO N N N N 284 PRO CA C N S 285 PRO C C N N 286 PRO O O N N 287 PRO CB C N N 288 PRO CG C N N 289 PRO CD C N N 290 PRO OXT O N N 291 PRO H H N N 292 PRO HA H N N 293 PRO HB2 H N N 294 PRO HB3 H N N 295 PRO HG2 H N N 296 PRO HG3 H N N 297 PRO HD2 H N N 298 PRO HD3 H N N 299 PRO HXT H N N 300 SER N N N N 301 SER CA C N S 302 SER C C N N 303 SER O O N N 304 SER CB C N N 305 SER OG O N N 306 SER OXT O N N 307 SER H H N N 308 SER H2 H N N 309 SER HA H N N 310 SER HB2 H N N 311 SER HB3 H N N 312 SER HG H N N 313 SER HXT H N N 314 THR N N N N 315 THR CA C N S 316 THR C C N N 317 THR O O N N 318 THR CB C N R 319 THR OG1 O N N 320 THR CG2 C N N 321 THR OXT O N N 322 THR H H N N 323 THR H2 H N N 324 THR HA H N N 325 THR HB H N N 326 THR HG1 H N N 327 THR HG21 H N N 328 THR HG22 H N N 329 THR HG23 H N N 330 THR HXT H N N 331 TYR N N N N 332 TYR CA C N S 333 TYR C C N N 334 TYR O O N N 335 TYR CB C N N 336 TYR CG C Y N 337 TYR CD1 C Y N 338 TYR CD2 C Y N 339 TYR CE1 C Y N 340 TYR CE2 C Y N 341 TYR CZ C Y N 342 TYR OH O N N 343 TYR OXT O N N 344 TYR H H N N 345 TYR H2 H N N 346 TYR HA H N N 347 TYR HB2 H N N 348 TYR HB3 H N N 349 TYR HD1 H N N 350 TYR HD2 H N N 351 TYR HE1 H N N 352 TYR HE2 H N N 353 TYR HH H N N 354 TYR HXT H N N 355 VAL N N N N 356 VAL CA C N S 357 VAL C C N N 358 VAL O O N N 359 VAL CB C N N 360 VAL CG1 C N N 361 VAL CG2 C N N 362 VAL OXT O N N 363 VAL H H N N 364 VAL H2 H N N 365 VAL HA H N N 366 VAL HB H N N 367 VAL HG11 H N N 368 VAL HG12 H N N 369 VAL HG13 H N N 370 VAL HG21 H N N 371 VAL HG22 H N N 372 VAL HG23 H N N 373 VAL HXT H N N 374 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 MLI C1 C2 sing N N 237 MLI C1 C3 sing N N 238 MLI C1 H11 sing N N 239 MLI C1 H12 sing N N 240 MLI C2 O6 doub N N 241 MLI C2 O7 sing N N 242 MLI C3 O8 doub N N 243 MLI C3 O9 sing N N 244 PHE N CA sing N N 245 PHE N H sing N N 246 PHE N H2 sing N N 247 PHE CA C sing N N 248 PHE CA CB sing N N 249 PHE CA HA sing N N 250 PHE C O doub N N 251 PHE C OXT sing N N 252 PHE CB CG sing N N 253 PHE CB HB2 sing N N 254 PHE CB HB3 sing N N 255 PHE CG CD1 doub Y N 256 PHE CG CD2 sing Y N 257 PHE CD1 CE1 sing Y N 258 PHE CD1 HD1 sing N N 259 PHE CD2 CE2 doub Y N 260 PHE CD2 HD2 sing N N 261 PHE CE1 CZ doub Y N 262 PHE CE1 HE1 sing N N 263 PHE CE2 CZ sing Y N 264 PHE CE2 HE2 sing N N 265 PHE CZ HZ sing N N 266 PHE OXT HXT sing N N 267 PRO N CA sing N N 268 PRO N CD sing N N 269 PRO N H sing N N 270 PRO CA C sing N N 271 PRO CA CB sing N N 272 PRO CA HA sing N N 273 PRO C O doub N N 274 PRO C OXT sing N N 275 PRO CB CG sing N N 276 PRO CB HB2 sing N N 277 PRO CB HB3 sing N N 278 PRO CG CD sing N N 279 PRO CG HG2 sing N N 280 PRO CG HG3 sing N N 281 PRO CD HD2 sing N N 282 PRO CD HD3 sing N N 283 PRO OXT HXT sing N N 284 SER N CA sing N N 285 SER N H sing N N 286 SER N H2 sing N N 287 SER CA C sing N N 288 SER CA CB sing N N 289 SER CA HA sing N N 290 SER C O doub N N 291 SER C OXT sing N N 292 SER CB OG sing N N 293 SER CB HB2 sing N N 294 SER CB HB3 sing N N 295 SER OG HG sing N N 296 SER OXT HXT sing N N 297 THR N CA sing N N 298 THR N H sing N N 299 THR N H2 sing N N 300 THR CA C sing N N 301 THR CA CB sing N N 302 THR CA HA sing N N 303 THR C O doub N N 304 THR C OXT sing N N 305 THR CB OG1 sing N N 306 THR CB CG2 sing N N 307 THR CB HB sing N N 308 THR OG1 HG1 sing N N 309 THR CG2 HG21 sing N N 310 THR CG2 HG22 sing N N 311 THR CG2 HG23 sing N N 312 THR OXT HXT sing N N 313 TYR N CA sing N N 314 TYR N H sing N N 315 TYR N H2 sing N N 316 TYR CA C sing N N 317 TYR CA CB sing N N 318 TYR CA HA sing N N 319 TYR C O doub N N 320 TYR C OXT sing N N 321 TYR CB CG sing N N 322 TYR CB HB2 sing N N 323 TYR CB HB3 sing N N 324 TYR CG CD1 doub Y N 325 TYR CG CD2 sing Y N 326 TYR CD1 CE1 sing Y N 327 TYR CD1 HD1 sing N N 328 TYR CD2 CE2 doub Y N 329 TYR CD2 HD2 sing N N 330 TYR CE1 CZ doub Y N 331 TYR CE1 HE1 sing N N 332 TYR CE2 CZ sing Y N 333 TYR CE2 HE2 sing N N 334 TYR CZ OH sing N N 335 TYR OH HH sing N N 336 TYR OXT HXT sing N N 337 VAL N CA sing N N 338 VAL N H sing N N 339 VAL N H2 sing N N 340 VAL CA C sing N N 341 VAL CA CB sing N N 342 VAL CA HA sing N N 343 VAL C O doub N N 344 VAL C OXT sing N N 345 VAL CB CG1 sing N N 346 VAL CB CG2 sing N N 347 VAL CB HB sing N N 348 VAL CG1 HG11 sing N N 349 VAL CG1 HG12 sing N N 350 VAL CG1 HG13 sing N N 351 VAL CG2 HG21 sing N N 352 VAL CG2 HG22 sing N N 353 VAL CG2 HG23 sing N N 354 VAL OXT HXT sing N N 355 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FE (III) ION' FE 3 'SODIUM ION' NA 4 'MALONATE ION' MLI 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1LM6 _pdbx_initial_refinement_model.details 'PDB ENTRY 1LM6' #