HEADER LECTIN (AGGLUTININ) 15-SEP-76 3CNA TITLE STRUCTURE OF CONCANAVALIN A AT 2.4 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONCANAVALIN A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN; SOURCE 4 ORGANISM_TAXID: 3823 KEYWDS LECTIN (AGGLUTININ) EXPDTA X-RAY DIFFRACTION AUTHOR K.D.HARDMAN,C.F.AINSWORTH REVDAT 9 21-FEB-24 3CNA 1 REMARK SEQADV LINK REVDAT 8 24-FEB-09 3CNA 1 VERSN REVDAT 7 01-APR-03 3CNA 1 JRNL REVDAT 6 15-APR-91 3CNA 1 SOURCE SITE REVDAT 5 27-JAN-84 3CNA 1 REMARK REVDAT 4 30-SEP-83 3CNA 1 REVDAT REVDAT 3 31-DEC-80 3CNA 1 REMARK REVDAT 2 01-NOV-77 3CNA 1 AUTHOR REMARK FORMUL REVDAT 1 11-OCT-76 3CNA 0 JRNL AUTH K.D.HARDMAN,C.F.AINSWORTH JRNL TITL STRUCTURE OF CONCANAVALIN A AT 2.4-A RESOLUTION. JRNL REF BIOCHEMISTRY V. 11 4910 1972 JRNL REFN ISSN 0006-2960 JRNL PMID 4638345 JRNL DOI 10.1021/BI00776A006 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.D.HARDMAN,C.F.AINSWORTH REMARK 1 TITL STRUCTURE OF THE CONCANAVALIN REMARK 1 TITL 2 A-METHYL-ALPHA-D-MANNOPYRANOSIDE COMPLEX AT 6.0 ANGSTROMS REMARK 1 TITL 3 RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 15 1120 1976 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.D.HARDMAN,C.F.AINSWORTH REMARK 1 TITL BINDING OF NONPOLAR MOLECULES BY CRYSTALLINE CONCANAVALIN A REMARK 1 REF BIOCHEMISTRY V. 12 4442 1973 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 3 REMARK 1 AUTH K.D.HARDMAN REMARK 1 TITL CRYSTALLOGRAPHY OF A METAL-CONTAINING PROTEIN, CONCANAVALIN REMARK 1 TITL 2 A REMARK 1 REF ADV.EXP.MED.BIOL. V. 40 103 1973 REMARK 1 REFN ISSN 0065-2598 REMARK 1 REFERENCE 4 REMARK 1 EDIT R.J.FELDMANN REMARK 1 REF ATLAS OF MACROMOLECULAR 464 1976 REMARK 1 REF 2 STRUCTURE ON MICROFICHE REMARK 1 PUBL TRACOR JITCO INC.,ROCKVILLE,MD. REMARK 1 REFN REMARK 1 REFERENCE 5 REMARK 1 EDIT M.O.DAYHOFF REMARK 1 REF ATLAS OF PROTEIN SEQUENCE V. 5 268 1976 REMARK 1 REF 2 AND STRUCTURE,SUPPLEMENT 2 REMARK 1 PUBL NATIONAL BIOMEDICAL RESEARCH FOUNDATION, SILVER SPRING,MD. REMARK 1 REFN ISSN 0-912466-05-7 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : NULL REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1807 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 4 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3CNA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.57500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.45500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.62500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.57500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.45500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.62500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.57500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.45500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.62500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.57500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.45500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.62500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 135 OD2 ASP A 136 1.22 REMARK 500 O ASN A 14 CB ASP A 19 1.72 REMARK 500 OH TYR A 54 O ASP A 80 1.74 REMARK 500 O LYS A 116 OG SER A 117 1.78 REMARK 500 O ASN A 118 N THR A 120 1.80 REMARK 500 CD1 LEU A 115 CE1 HIS A 180 1.87 REMARK 500 OE2 GLU A 87 CD1 TRP A 182 1.91 REMARK 500 O SER A 134 CG2 THR A 148 1.98 REMARK 500 CG GLU A 102 O ALA A 207 2.00 REMARK 500 OE2 GLU A 87 CG TRP A 182 2.01 REMARK 500 OE2 GLU A 87 NE1 TRP A 182 2.04 REMARK 500 O ARG A 228 N LEU A 230 2.06 REMARK 500 OD2 ASP A 208 O HOH A 242 2.07 REMARK 500 CG GLU A 87 CB TRP A 182 2.08 REMARK 500 ND2 ASN A 162 OG SER A 164 2.13 REMARK 500 OE2 GLU A 87 CE2 TRP A 182 2.15 REMARK 500 CB ILE A 141 O LEU A 174 2.16 REMARK 500 OE2 GLU A 87 CD2 TRP A 182 2.16 REMARK 500 OE1 GLU A 8 OD1 ASP A 10 2.17 REMARK 500 CB PRO A 222 OG SER A 225 2.18 REMARK 500 CA THR A 15 O ASP A 19 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 58 CD ARG A 60 3555 1.44 REMARK 500 NE2 GLN A 122 OE1 GLN A 132 4555 1.49 REMARK 500 OD1 ASP A 58 NH1 ARG A 60 3555 1.88 REMARK 500 OD1 ASP A 58 NE ARG A 60 3555 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN A 237 C ASN A 237 O 0.149 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 106 CA - CB - CG2 ANGL. DEV. = 18.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 20 -179.51 -62.27 REMARK 500 LYS A 30 -1.29 54.99 REMARK 500 ARG A 33 76.31 -62.61 REMARK 500 SER A 34 143.54 -29.13 REMARK 500 ASN A 69 -14.74 55.60 REMARK 500 LEU A 81 -12.18 90.54 REMARK 500 ALA A 95 145.79 -178.28 REMARK 500 GLU A 102 152.08 168.71 REMARK 500 LYS A 116 -154.99 -132.46 REMARK 500 SER A 117 -120.73 81.53 REMARK 500 ASN A 118 15.11 39.34 REMARK 500 SER A 119 5.61 30.03 REMARK 500 THR A 123 150.40 79.74 REMARK 500 PHE A 128 147.67 166.57 REMARK 500 ASN A 131 -34.27 -169.75 REMARK 500 ASP A 136 74.16 77.92 REMARK 500 LYS A 138 -37.74 96.27 REMARK 500 ASP A 145 -1.80 -54.72 REMARK 500 THR A 150 -45.11 -142.74 REMARK 500 ASP A 151 30.71 -162.27 REMARK 500 SER A 164 77.79 -115.88 REMARK 500 TRP A 182 -130.84 -125.63 REMARK 500 GLU A 183 120.48 101.71 REMARK 500 THR A 188 121.61 178.42 REMARK 500 LYS A 200 -133.19 -80.82 REMARK 500 SER A 201 112.73 117.84 REMARK 500 ALA A 211 -154.23 -151.50 REMARK 500 SER A 215 -176.84 179.56 REMARK 500 ASN A 216 -179.51 -56.10 REMARK 500 ASP A 218 32.85 -89.15 REMARK 500 SER A 225 43.04 -89.04 REMARK 500 ARG A 228 -74.14 -68.53 REMARK 500 LEU A 229 -52.07 -8.68 REMARK 500 LEU A 230 -9.53 103.90 REMARK 500 LEU A 232 -32.77 -136.12 REMARK 500 PRO A 234 14.03 -62.63 REMARK 500 ASP A 235 -88.44 118.99 REMARK 500 ALA A 236 96.73 -50.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 238 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD1 79.0 REMARK 620 3 ASP A 19 OD1 151.4 113.8 REMARK 620 4 HIS A 24 NE2 104.4 121.2 90.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 239 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD2 REMARK 620 2 TYR A 12 O 87.4 REMARK 620 3 ASN A 14 OD1 146.7 98.2 REMARK 620 4 ASP A 19 OD2 117.4 108.1 92.2 REMARK 620 5 HOH A 242 O 74.1 109.0 73.1 141.6 REMARK 620 6 HOH A 243 O 95.7 174.1 81.9 66.0 76.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: MN REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES BINDING THE MANGANESE ION REMARK 800 REMARK 800 SITE_IDENTIFIER: CA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES BINDING THE CALCIUM ION REMARK 800 REMARK 800 SITE_IDENTIFIER: CHO REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES INVOLVED IN CARBOHYDRATE BINDING REMARK 800 REMARK 800 SITE_IDENTIFIER: NP REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RESIDUES INVOLVED IN BINDING NON-POLAR GROUPS REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 238 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 239 DBREF 3CNA A 1 237 UNP P02866 CONA_CANEN 1 237 SEQADV 3CNA ALA A 186 UNP P02866 INSERTION SEQADV 3CNA A UNP P02866 ALA 190 DELETION SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 A 237 TRP ASN MET GLN ASP GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 A 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR PRO ASN ALA ASP ALA THR SER VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASN ASP VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 A 237 ASN SER THR HIS GLN THR ASP ALA LEU HIS PHE MET PHE SEQRES 11 A 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 A 237 THR ARG VAL SER SER ASN GLY SER PRO GLU GLY SER SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU SER SER ALA ALA THR VAL SER PHE GLU ALA THR PHE SEQRES 16 A 237 ALA PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 A 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 A 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN HET MN A 238 1 HET CA A 239 1 HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION FORMUL 2 MN MN 2+ FORMUL 3 CA CA 2+ FORMUL 4 HOH *4(H2 O) SHEET 1 I 6 THR A 73 VAL A 79 0 SHEET 2 I 6 LYS A 59 TYR A 67 -1 SHEET 3 I 6 THR A 49 SER A 56 -1 SHEET 4 I 6 VAL A 189 LEU A 198 -1 SHEET 5 I 6 LEU A 107 LEU A 115 -1 SHEET 6 I 6 ASP A 124 ASN A 131 -1 SHEET 1 II 7 LYS A 35 ALA A 38 0 SHEET 2 II 7 HIS A 24 LYS A 30 -1 SHEET 3 II 7 ILE A 4 ASP A 10 -1 SHEET 4 II 7 ASP A 208 SER A 215 -1 SHEET 5 II 7 ARG A 90 THR A 97 -1 SHEET 6 II 7 SER A 169 TYR A 176 -1 SHEET 7 II 7 ASP A 139 ASP A 145 -1 SHEET 1 III 5 LYS A 46 GLY A 48 0 SHEET 2 III 5 PHE A 197 ILE A 199 -1 SHEET 3 III 5 ASN A 104 LEU A 107 -1 SHEET 4 III 5 ASN A 153 LEU A 156 -1 SHEET 5 III 5 THR A 147 THR A 150 -1 LINK OE2 GLU A 8 MN MN A 238 1555 1555 2.68 LINK OD1 ASP A 10 MN MN A 238 1555 1555 2.67 LINK OD2 ASP A 10 CA CA A 239 1555 1555 2.09 LINK O TYR A 12 CA CA A 239 1555 1555 1.96 LINK OD1 ASN A 14 CA CA A 239 1555 1555 2.04 LINK OD1 ASP A 19 MN MN A 238 1555 1555 2.32 LINK OD2 ASP A 19 CA CA A 239 1555 1555 2.26 LINK NE2 HIS A 24 MN MN A 238 1555 1555 2.07 LINK CA CA A 239 O HOH A 242 1555 1555 2.82 LINK CA CA A 239 O HOH A 243 1555 1555 1.94 CISPEP 1 ALA A 207 ASP A 208 0 8.82 SITE 1 MN 7 GLU A 8 ASP A 10 ASP A 19 HIS A 24 SITE 2 MN 7 SER A 34 HOH A 240 HOH A 241 SITE 1 CA 7 ASP A 10 TYR A 12 ASN A 14 ASP A 19 SITE 2 CA 7 ASP A 208 HOH A 242 HOH A 243 SITE 1 CHO 12 TYR A 12 PRO A 13 ASN A 14 THR A 15 SITE 2 CHO 12 ASP A 16 LEU A 99 TYR A 100 SER A 168 SITE 3 CHO 12 HIS A 205 PRO A 206 ALA A 207 ASP A 208 SITE 1 NP 10 TYR A 54 LEU A 81 LEU A 85 VAL A 89 SITE 2 NP 10 VAL A 91 PHE A 111 VAL A 179 ILE A 181 SITE 3 NP 10 PHE A 191 ILE A 214 SITE 1 AC1 6 GLU A 8 ASP A 10 ASP A 19 HIS A 24 SITE 2 AC1 6 HOH A 240 HOH A 241 SITE 1 AC2 6 ASP A 10 TYR A 12 ASN A 14 ASP A 19 SITE 2 AC2 6 HOH A 242 HOH A 243 CRYST1 63.150 86.910 89.250 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015835 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011506 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011204 0.00000