data_3CQB # _entry.id 3CQB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3CQB RCSB RCSB047083 WWPDB D_1000047083 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC91272.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CQB _pdbx_database_status.recvd_initial_deposition_date 2008-04-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, R.' 1 'Clancy, S.' 2 'Joachimiak, A.' 3 'Midwest Center for Structural Genomics (MCSG)' 4 # _citation.id primary _citation.title 'The crystal structure of heat shock protein HtpX domain from Vibrio parahaemolyticus RIMD 2210633.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wu, R.' 1 primary 'Clancy, S.' 2 primary 'Joachimiak, A.' 3 # _cell.entry_id 3CQB _cell.length_a 75.873 _cell.length_b 75.873 _cell.length_c 65.471 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CQB _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable protease htpX homolog' 11663.994 2 3.4.24.- ? 'Domain: Residues 58-161' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 6 water nat water 18.015 194 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNASKG(MSE)ALRSVGG(MSE)VIESPRNETEHWLLETVGRQAQQAGIG(MSE)PTVAIYDSADINAFATGAKRDDSLV AVSTGLLHN(MSE)TRDEAEAVLAHEVSHIANGD(MSE)VT(MSE)TL(MSE)QG ; _entity_poly.pdbx_seq_one_letter_code_can ;SNASKGMALRSVGGMVIESPRNETEHWLLETVGRQAQQAGIGMPTVAIYDSADINAFATGAKRDDSLVAVSTGLLHNMTR DEAEAVLAHEVSHIANGDMVTMTLMQG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier APC91272.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 SER n 1 5 LYS n 1 6 GLY n 1 7 MSE n 1 8 ALA n 1 9 LEU n 1 10 ARG n 1 11 SER n 1 12 VAL n 1 13 GLY n 1 14 GLY n 1 15 MSE n 1 16 VAL n 1 17 ILE n 1 18 GLU n 1 19 SER n 1 20 PRO n 1 21 ARG n 1 22 ASN n 1 23 GLU n 1 24 THR n 1 25 GLU n 1 26 HIS n 1 27 TRP n 1 28 LEU n 1 29 LEU n 1 30 GLU n 1 31 THR n 1 32 VAL n 1 33 GLY n 1 34 ARG n 1 35 GLN n 1 36 ALA n 1 37 GLN n 1 38 GLN n 1 39 ALA n 1 40 GLY n 1 41 ILE n 1 42 GLY n 1 43 MSE n 1 44 PRO n 1 45 THR n 1 46 VAL n 1 47 ALA n 1 48 ILE n 1 49 TYR n 1 50 ASP n 1 51 SER n 1 52 ALA n 1 53 ASP n 1 54 ILE n 1 55 ASN n 1 56 ALA n 1 57 PHE n 1 58 ALA n 1 59 THR n 1 60 GLY n 1 61 ALA n 1 62 LYS n 1 63 ARG n 1 64 ASP n 1 65 ASP n 1 66 SER n 1 67 LEU n 1 68 VAL n 1 69 ALA n 1 70 VAL n 1 71 SER n 1 72 THR n 1 73 GLY n 1 74 LEU n 1 75 LEU n 1 76 HIS n 1 77 ASN n 1 78 MSE n 1 79 THR n 1 80 ARG n 1 81 ASP n 1 82 GLU n 1 83 ALA n 1 84 GLU n 1 85 ALA n 1 86 VAL n 1 87 LEU n 1 88 ALA n 1 89 HIS n 1 90 GLU n 1 91 VAL n 1 92 SER n 1 93 HIS n 1 94 ILE n 1 95 ALA n 1 96 ASN n 1 97 GLY n 1 98 ASP n 1 99 MSE n 1 100 VAL n 1 101 THR n 1 102 MSE n 1 103 THR n 1 104 LEU n 1 105 MSE n 1 106 GLN n 1 107 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'htpX, VP1118' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'RIMD 2210633 / Serotype O3:K6' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vibrio parahaemolyticus RIMD 2210633' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pDM68 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HTPX_VIBPA _struct_ref.pdbx_db_accession Q87QN1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SKGMALRSVGGMVIESPRNETEHWLLETVGRQAQQAGIGMPTVAIYDSADINAFATGAKRDDSLVAVSTGLLHNMTRDEA EAVLAHEVSHIANGDMVTMTLMQG ; _struct_ref.pdbx_align_begin 58 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CQB A 4 ? 107 ? Q87QN1 58 ? 161 ? 1 104 2 1 3CQB B 4 ? 107 ? Q87QN1 58 ? 161 ? 1 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CQB SER A 1 ? UNP Q87QN1 ? ? 'EXPRESSION TAG' -2 1 1 3CQB ASN A 2 ? UNP Q87QN1 ? ? 'EXPRESSION TAG' -1 2 1 3CQB ALA A 3 ? UNP Q87QN1 ? ? 'EXPRESSION TAG' 0 3 2 3CQB SER B 1 ? UNP Q87QN1 ? ? 'EXPRESSION TAG' -2 4 2 3CQB ASN B 2 ? UNP Q87QN1 ? ? 'EXPRESSION TAG' -1 5 2 3CQB ALA B 3 ? UNP Q87QN1 ? ? 'EXPRESSION TAG' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3CQB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.33 _exptl_crystal.density_percent_sol 47.25 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '0.5M Na malonate pH 7.0, 0.1M Tris-HCl pH 7.0, 0.5% Jeffamine ED-2001 pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-2 _diffrn_detector.pdbx_collection_date 2007-10-11 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97924 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97924 # _reflns.entry_id 3CQB _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.58 _reflns.d_resolution_low 50.0 _reflns.number_all 30144 _reflns.number_obs 27657 _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.095 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.8 _reflns.B_iso_Wilson_estimate 21.538 _reflns.pdbx_redundancy 12.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.58 _reflns_shell.d_res_low 1.64 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.847 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.8 _reflns_shell.pdbx_redundancy 10.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2382 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3CQB _refine.ls_number_reflns_obs 17651 _refine.ls_number_reflns_all 17651 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.37 _refine.ls_d_res_high 1.86 _refine.ls_percent_reflns_obs 99.64 _refine.ls_R_factor_obs 0.15435 _refine.ls_R_factor_all 0.15435 _refine.ls_R_factor_R_work 0.15234 _refine.ls_R_factor_R_free 0.19227 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 958 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.966 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 24.425 _refine.aniso_B[1][1] 0.21 _refine.aniso_B[2][2] 0.21 _refine.aniso_B[3][3] -0.31 _refine.aniso_B[1][2] 0.10 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.118 _refine.pdbx_overall_ESU_R_Free 0.115 _refine.overall_SU_ML 0.066 _refine.overall_SU_B 4.219 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1509 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.number_atoms_solvent 194 _refine_hist.number_atoms_total 1732 _refine_hist.d_res_high 1.86 _refine_hist.d_res_low 46.37 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.021 ? 1589 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.475 1.950 ? 2146 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.163 5.000 ? 211 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.722 25.224 ? 67 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.439 15.000 ? 267 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.782 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.277 0.200 ? 251 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1183 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.230 0.200 ? 800 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.291 0.200 ? 1114 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.203 0.200 ? 180 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.288 0.200 ? 100 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.214 0.200 ? 56 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.923 1.500 ? 1033 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.745 2.000 ? 1654 'X-RAY DIFFRACTION' ? r_scbond_it 3.009 3.000 ? 567 'X-RAY DIFFRACTION' ? r_scangle_it 4.714 4.500 ? 492 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.860 _refine_ls_shell.d_res_low 1.908 _refine_ls_shell.number_reflns_R_work 1264 _refine_ls_shell.R_factor_R_work 0.168 _refine_ls_shell.percent_reflns_obs 99.93 _refine_ls_shell.R_factor_R_free 0.207 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 78 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1342 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CQB _struct.title 'Crystal structure of heat shock protein HtpX domain from Vibrio parahaemolyticus RIMD 2210633' _struct.pdbx_descriptor 'Probable protease htpX homolog (E.C.3.4.24.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CQB _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;Heat shock protein HtpX domain, PSI-2, Protein Structure Initiative, Structural Genomics, Midwest Center for Structural Genomics (MCSG), Hydrolase, Inner membrane, Membrane, Metal-binding, Metalloprotease, Protease, Transmembrane ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 5 ? L N N 6 ? M N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 22 ? GLY A 40 ? ASN A 19 GLY A 37 1 ? 19 HELX_P HELX_P2 2 THR A 72 ? MSE A 78 ? THR A 69 MSE A 75 1 ? 7 HELX_P HELX_P3 3 THR A 79 ? ASN A 96 ? THR A 76 ASN A 93 1 ? 18 HELX_P HELX_P4 4 LEU B 9 ? GLY B 13 ? LEU B 6 GLY B 10 5 ? 5 HELX_P HELX_P5 5 ASN B 22 ? GLY B 40 ? ASN B 19 GLY B 37 1 ? 19 HELX_P HELX_P6 6 THR B 72 ? MSE B 78 ? THR B 69 MSE B 75 1 ? 7 HELX_P HELX_P7 7 THR B 79 ? ASN B 96 ? THR B 76 ASN B 93 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLY 6 C ? ? ? 1_555 A MSE 7 N ? ? A GLY 3 A MSE 4 1_555 ? ? ? ? ? ? ? 1.337 ? covale2 covale ? ? A MSE 7 C ? ? ? 1_555 A ALA 8 N ? ? A MSE 4 A ALA 5 1_555 ? ? ? ? ? ? ? 1.341 ? covale3 covale ? ? A GLY 14 C ? ? ? 1_555 A MSE 15 N ? ? A GLY 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 15 C ? ? ? 1_555 A VAL 16 N ? ? A MSE 12 A VAL 13 1_555 ? ? ? ? ? ? ? 1.320 ? covale5 covale ? ? A GLY 42 C ? ? ? 1_555 A MSE 43 N ? ? A GLY 39 A MSE 40 1_555 ? ? ? ? ? ? ? 1.333 ? covale6 covale ? ? A MSE 43 C ? ? ? 1_555 A PRO 44 N ? ? A MSE 40 A PRO 41 1_555 ? ? ? ? ? ? ? 1.338 ? covale7 covale ? ? A ASN 77 C ? ? ? 1_555 A MSE 78 N ? ? A ASN 74 A MSE 75 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? A MSE 78 C ? ? ? 1_555 A THR 79 N ? ? A MSE 75 A THR 76 1_555 ? ? ? ? ? ? ? 1.334 ? covale9 covale ? ? A ASP 98 C ? ? ? 1_555 A MSE 99 N ? ? A ASP 95 A MSE 96 1_555 ? ? ? ? ? ? ? 1.333 ? covale10 covale ? ? A MSE 99 C ? ? ? 1_555 A VAL 100 N ? ? A MSE 96 A VAL 97 1_555 ? ? ? ? ? ? ? 1.331 ? covale11 covale ? ? A THR 101 C ? ? ? 1_555 A MSE 102 N ? ? A THR 98 A MSE 99 1_555 ? ? ? ? ? ? ? 1.332 ? covale12 covale ? ? A MSE 102 C ? ? ? 1_555 A THR 103 N ? ? A MSE 99 A THR 100 1_555 ? ? ? ? ? ? ? 1.329 ? covale13 covale ? ? A LEU 104 C ? ? ? 1_555 A MSE 105 N ? ? A LEU 101 A MSE 102 1_555 ? ? ? ? ? ? ? 1.329 ? covale14 covale ? ? A MSE 105 C ? ? ? 1_555 A GLN 106 N ? ? A MSE 102 A GLN 103 1_555 ? ? ? ? ? ? ? 1.337 ? covale15 covale ? ? B MSE 7 C ? ? ? 1_555 B ALA 8 N ? ? B MSE 4 B ALA 5 1_555 ? ? ? ? ? ? ? 1.335 ? covale16 covale ? ? B GLY 14 C ? ? ? 1_555 B MSE 15 N ? ? B GLY 11 B MSE 12 1_555 ? ? ? ? ? ? ? 1.324 ? covale17 covale ? ? B MSE 15 C ? ? ? 1_555 B VAL 16 N ? ? B MSE 12 B VAL 13 1_555 ? ? ? ? ? ? ? 1.331 ? covale18 covale ? ? B GLY 42 C ? ? ? 1_555 B MSE 43 N ? ? B GLY 39 B MSE 40 1_555 ? ? ? ? ? ? ? 1.327 ? covale19 covale ? ? B MSE 43 C ? ? ? 1_555 B PRO 44 N ? ? B MSE 40 B PRO 41 1_555 ? ? ? ? ? ? ? 1.347 ? covale20 covale ? ? B ASN 77 C ? ? ? 1_555 B MSE 78 N A ? B ASN 74 B MSE 75 1_555 ? ? ? ? ? ? ? 1.329 ? covale21 covale ? ? B ASN 77 C ? ? ? 1_555 B MSE 78 N B ? B ASN 74 B MSE 75 1_555 ? ? ? ? ? ? ? 1.330 ? covale22 covale ? ? B MSE 78 C A ? ? 1_555 B THR 79 N ? ? B MSE 75 B THR 76 1_555 ? ? ? ? ? ? ? 1.335 ? covale23 covale ? ? B MSE 78 C B ? ? 1_555 B THR 79 N ? ? B MSE 75 B THR 76 1_555 ? ? ? ? ? ? ? 1.335 ? covale24 covale ? ? B ASP 98 C ? ? ? 1_555 B MSE 99 N ? ? B ASP 95 B MSE 96 1_555 ? ? ? ? ? ? ? 1.335 ? covale25 covale ? ? B MSE 99 C ? ? ? 1_555 B VAL 100 N ? ? B MSE 96 B VAL 97 1_555 ? ? ? ? ? ? ? 1.333 ? covale26 covale ? ? B THR 101 C ? ? ? 1_555 B MSE 102 N ? ? B THR 98 B MSE 99 1_555 ? ? ? ? ? ? ? 1.329 ? covale27 covale ? ? B MSE 102 C ? ? ? 1_555 B THR 103 N ? ? B MSE 99 B THR 100 1_555 ? ? ? ? ? ? ? 1.330 ? covale28 covale ? ? B LEU 104 C ? ? ? 1_555 B MSE 105 N ? ? B LEU 101 B MSE 102 1_555 ? ? ? ? ? ? ? 1.326 ? covale29 covale ? ? B MSE 105 C ? ? ? 1_555 B GLN 106 N ? ? B MSE 102 B GLN 103 1_555 ? ? ? ? ? ? ? 1.322 ? metalc1 metalc ? ? A ASP 53 OD1 ? ? ? 1_555 D NA . NA ? ? A ASP 50 A NA 106 1_555 ? ? ? ? ? ? ? 2.422 ? metalc2 metalc ? ? B ASP 50 OD1 ? ? ? 1_555 H NA . NA ? ? B ASP 47 B NA 105 1_555 ? ? ? ? ? ? ? 2.641 ? metalc3 metalc ? ? B THR 72 OG1 ? ? ? 1_555 H NA . NA ? ? B THR 69 B NA 105 1_555 ? ? ? ? ? ? ? 2.846 ? metalc4 metalc ? ? D NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 106 A HOH 158 1_555 ? ? ? ? ? ? ? 2.690 ? metalc5 metalc ? ? D NA . NA ? ? ? 1_555 L HOH . O ? ? A NA 106 A HOH 200 1_555 ? ? ? ? ? ? ? 2.805 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 10 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? parallel A 9 10 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MSE A 15 ? VAL A 16 ? MSE A 12 VAL A 13 A 2 THR A 45 ? TYR A 49 ? THR A 42 TYR A 46 A 3 LEU A 67 ? SER A 71 ? LEU A 64 SER A 68 A 4 ILE A 54 ? THR A 59 ? ILE A 51 THR A 56 A 5 MSE A 99 ? MSE A 105 ? MSE A 96 MSE A 102 A 6 MSE B 99 ? MSE B 105 ? MSE B 96 MSE B 102 A 7 ILE B 54 ? THR B 59 ? ILE B 51 THR B 56 A 8 LEU B 67 ? SER B 71 ? LEU B 64 SER B 68 A 9 THR B 45 ? TYR B 49 ? THR B 42 TYR B 46 A 10 MSE B 15 ? VAL B 16 ? MSE B 12 VAL B 13 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MSE A 15 ? N MSE A 12 O ILE A 48 ? O ILE A 45 A 2 3 N THR A 45 ? N THR A 42 O VAL A 68 ? O VAL A 65 A 3 4 O ALA A 69 ? O ALA A 66 N PHE A 57 ? N PHE A 54 A 4 5 N ALA A 58 ? N ALA A 55 O VAL A 100 ? O VAL A 97 A 5 6 N THR A 101 ? N THR A 98 O THR B 103 ? O THR B 100 A 6 7 O VAL B 100 ? O VAL B 97 N ALA B 58 ? N ALA B 55 A 7 8 N PHE B 57 ? N PHE B 54 O ALA B 69 ? O ALA B 66 A 8 9 O VAL B 68 ? O VAL B 65 N THR B 45 ? N THR B 42 A 9 10 O ILE B 48 ? O ILE B 45 N MSE B 15 ? N MSE B 12 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE NA A 106' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NA B 105' AC4 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE EDO A 107' AC5 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE EDO B 106' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE EDO A 108' AC7 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE EDO A 109' AC8 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE EDO B 107' AC9 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL B 108' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC2 3 ASP A 50 ? ASP A 47 . ? 5_555 ? 2 AC2 3 SER A 51 ? SER A 48 . ? 1_555 ? 3 AC2 3 ASP A 53 ? ASP A 50 . ? 1_555 ? 4 AC3 4 LYS A 5 ? LYS A 2 . ? 5_555 ? 5 AC3 4 HIS A 76 ? HIS A 73 . ? 4_545 ? 6 AC3 4 ASP B 50 ? ASP B 47 . ? 1_555 ? 7 AC3 4 THR B 72 ? THR B 69 . ? 1_555 ? 8 AC4 1 HIS A 89 ? HIS A 86 . ? 1_555 ? 9 AC5 1 HIS B 89 ? HIS B 86 . ? 1_555 ? 10 AC6 4 ASN A 2 ? ASN A -1 . ? 1_555 ? 11 AC6 4 ALA A 3 ? ALA A 0 . ? 1_555 ? 12 AC6 4 SER A 4 ? SER A 1 . ? 1_555 ? 13 AC6 4 ASP B 50 ? ASP B 47 . ? 5_555 ? 14 AC7 5 HIS A 76 ? HIS A 73 . ? 1_555 ? 15 AC7 5 ASN A 77 ? ASN A 74 . ? 1_555 ? 16 AC7 5 THR B 72 ? THR B 69 . ? 4_655 ? 17 AC7 5 LEU B 75 ? LEU B 72 . ? 4_655 ? 18 AC7 5 HIS B 76 ? HIS B 73 . ? 4_655 ? 19 AC8 8 LYS A 5 ? LYS A 2 . ? 5_555 ? 20 AC8 8 HIS A 76 ? HIS A 73 . ? 4_545 ? 21 AC8 8 ASN A 77 ? ASN A 74 . ? 4_545 ? 22 AC8 8 SER B 51 ? SER B 48 . ? 1_555 ? 23 AC8 8 ALA B 52 ? ALA B 49 . ? 1_555 ? 24 AC8 8 THR B 72 ? THR B 69 . ? 1_555 ? 25 AC8 8 GLY B 73 ? GLY B 70 . ? 1_555 ? 26 AC8 8 HIS B 76 ? HIS B 73 . ? 1_555 ? 27 AC9 4 TRP B 27 ? TRP B 24 . ? 1_555 ? 28 AC9 4 LEU B 74 ? LEU B 71 . ? 1_555 ? 29 AC9 4 LEU B 75 ? LEU B 72 . ? 1_555 ? 30 AC9 4 ARG B 80 ? ARG B 77 . ? 1_555 ? # _database_PDB_matrix.entry_id 3CQB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3CQB _atom_sites.fract_transf_matrix[1][1] 0.013180 _atom_sites.fract_transf_matrix[1][2] 0.007609 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015219 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015274 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N NA O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 SER 4 1 1 SER SER A . n A 1 5 LYS 5 2 2 LYS LYS A . n A 1 6 GLY 6 3 3 GLY GLY A . n A 1 7 MSE 7 4 4 MSE MSE A . n A 1 8 ALA 8 5 5 ALA ALA A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 ARG 10 7 7 ARG ARG A . n A 1 11 SER 11 8 8 SER SER A . n A 1 12 VAL 12 9 9 VAL VAL A . n A 1 13 GLY 13 10 10 GLY GLY A . n A 1 14 GLY 14 11 11 GLY GLY A . n A 1 15 MSE 15 12 12 MSE MSE A . n A 1 16 VAL 16 13 13 VAL VAL A . n A 1 17 ILE 17 14 14 ILE ILE A . n A 1 18 GLU 18 15 15 GLU GLU A . n A 1 19 SER 19 16 16 SER SER A . n A 1 20 PRO 20 17 17 PRO PRO A . n A 1 21 ARG 21 18 18 ARG ARG A . n A 1 22 ASN 22 19 19 ASN ASN A . n A 1 23 GLU 23 20 20 GLU GLU A . n A 1 24 THR 24 21 21 THR THR A . n A 1 25 GLU 25 22 22 GLU GLU A . n A 1 26 HIS 26 23 23 HIS HIS A . n A 1 27 TRP 27 24 24 TRP TRP A . n A 1 28 LEU 28 25 25 LEU LEU A . n A 1 29 LEU 29 26 26 LEU LEU A . n A 1 30 GLU 30 27 27 GLU GLU A . n A 1 31 THR 31 28 28 THR THR A . n A 1 32 VAL 32 29 29 VAL VAL A . n A 1 33 GLY 33 30 30 GLY GLY A . n A 1 34 ARG 34 31 31 ARG ARG A . n A 1 35 GLN 35 32 32 GLN GLN A . n A 1 36 ALA 36 33 33 ALA ALA A . n A 1 37 GLN 37 34 34 GLN GLN A . n A 1 38 GLN 38 35 35 GLN GLN A . n A 1 39 ALA 39 36 36 ALA ALA A . n A 1 40 GLY 40 37 37 GLY GLY A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 GLY 42 39 39 GLY GLY A . n A 1 43 MSE 43 40 40 MSE MSE A . n A 1 44 PRO 44 41 41 PRO PRO A . n A 1 45 THR 45 42 42 THR THR A . n A 1 46 VAL 46 43 43 VAL VAL A . n A 1 47 ALA 47 44 44 ALA ALA A . n A 1 48 ILE 48 45 45 ILE ILE A . n A 1 49 TYR 49 46 46 TYR TYR A . n A 1 50 ASP 50 47 47 ASP ASP A . n A 1 51 SER 51 48 48 SER SER A . n A 1 52 ALA 52 49 49 ALA ALA A . n A 1 53 ASP 53 50 50 ASP ASP A . n A 1 54 ILE 54 51 51 ILE ILE A . n A 1 55 ASN 55 52 52 ASN ASN A . n A 1 56 ALA 56 53 53 ALA ALA A . n A 1 57 PHE 57 54 54 PHE PHE A . n A 1 58 ALA 58 55 55 ALA ALA A . n A 1 59 THR 59 56 56 THR THR A . n A 1 60 GLY 60 57 57 GLY GLY A . n A 1 61 ALA 61 58 58 ALA ALA A . n A 1 62 LYS 62 59 59 LYS LYS A . n A 1 63 ARG 63 60 ? ? ? A . n A 1 64 ASP 64 61 ? ? ? A . n A 1 65 ASP 65 62 62 ASP ASP A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 LEU 67 64 64 LEU LEU A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 ALA 69 66 66 ALA ALA A . n A 1 70 VAL 70 67 67 VAL VAL A . n A 1 71 SER 71 68 68 SER SER A . n A 1 72 THR 72 69 69 THR THR A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 LEU 75 72 72 LEU LEU A . n A 1 76 HIS 76 73 73 HIS HIS A . n A 1 77 ASN 77 74 74 ASN ASN A . n A 1 78 MSE 78 75 75 MSE MSE A . n A 1 79 THR 79 76 76 THR THR A . n A 1 80 ARG 80 77 77 ARG ARG A . n A 1 81 ASP 81 78 78 ASP ASP A . n A 1 82 GLU 82 79 79 GLU GLU A . n A 1 83 ALA 83 80 80 ALA ALA A . n A 1 84 GLU 84 81 81 GLU GLU A . n A 1 85 ALA 85 82 82 ALA ALA A . n A 1 86 VAL 86 83 83 VAL VAL A . n A 1 87 LEU 87 84 84 LEU LEU A . n A 1 88 ALA 88 85 85 ALA ALA A . n A 1 89 HIS 89 86 86 HIS HIS A . n A 1 90 GLU 90 87 87 GLU GLU A . n A 1 91 VAL 91 88 88 VAL VAL A . n A 1 92 SER 92 89 89 SER SER A . n A 1 93 HIS 93 90 90 HIS HIS A . n A 1 94 ILE 94 91 91 ILE ILE A . n A 1 95 ALA 95 92 92 ALA ALA A . n A 1 96 ASN 96 93 93 ASN ASN A . n A 1 97 GLY 97 94 94 GLY GLY A . n A 1 98 ASP 98 95 95 ASP ASP A . n A 1 99 MSE 99 96 96 MSE MSE A . n A 1 100 VAL 100 97 97 VAL VAL A . n A 1 101 THR 101 98 98 THR THR A . n A 1 102 MSE 102 99 99 MSE MSE A . n A 1 103 THR 103 100 100 THR THR A . n A 1 104 LEU 104 101 101 LEU LEU A . n A 1 105 MSE 105 102 102 MSE MSE A . n A 1 106 GLN 106 103 103 GLN GLN A . n A 1 107 GLY 107 104 ? ? ? A . n B 1 1 SER 1 -2 ? ? ? B . n B 1 2 ASN 2 -1 ? ? ? B . n B 1 3 ALA 3 0 ? ? ? B . n B 1 4 SER 4 1 ? ? ? B . n B 1 5 LYS 5 2 ? ? ? B . n B 1 6 GLY 6 3 ? ? ? B . n B 1 7 MSE 7 4 4 MSE MSE B . n B 1 8 ALA 8 5 5 ALA ALA B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 ARG 10 7 7 ARG ARG B . n B 1 11 SER 11 8 8 SER SER B . n B 1 12 VAL 12 9 9 VAL VAL B . n B 1 13 GLY 13 10 10 GLY GLY B . n B 1 14 GLY 14 11 11 GLY GLY B . n B 1 15 MSE 15 12 12 MSE MSE B . n B 1 16 VAL 16 13 13 VAL VAL B . n B 1 17 ILE 17 14 14 ILE ILE B . n B 1 18 GLU 18 15 15 GLU GLU B . n B 1 19 SER 19 16 16 SER SER B . n B 1 20 PRO 20 17 17 PRO PRO B . n B 1 21 ARG 21 18 18 ARG ARG B . n B 1 22 ASN 22 19 19 ASN ASN B . n B 1 23 GLU 23 20 20 GLU GLU B . n B 1 24 THR 24 21 21 THR THR B . n B 1 25 GLU 25 22 22 GLU GLU B . n B 1 26 HIS 26 23 23 HIS HIS B . n B 1 27 TRP 27 24 24 TRP TRP B . n B 1 28 LEU 28 25 25 LEU LEU B . n B 1 29 LEU 29 26 26 LEU LEU B . n B 1 30 GLU 30 27 27 GLU GLU B . n B 1 31 THR 31 28 28 THR THR B . n B 1 32 VAL 32 29 29 VAL VAL B . n B 1 33 GLY 33 30 30 GLY GLY B . n B 1 34 ARG 34 31 31 ARG ARG B . n B 1 35 GLN 35 32 32 GLN GLN B . n B 1 36 ALA 36 33 33 ALA ALA B . n B 1 37 GLN 37 34 34 GLN GLN B . n B 1 38 GLN 38 35 35 GLN GLN B . n B 1 39 ALA 39 36 36 ALA ALA B . n B 1 40 GLY 40 37 37 GLY GLY B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 GLY 42 39 39 GLY GLY B . n B 1 43 MSE 43 40 40 MSE MSE B . n B 1 44 PRO 44 41 41 PRO PRO B . n B 1 45 THR 45 42 42 THR THR B . n B 1 46 VAL 46 43 43 VAL VAL B . n B 1 47 ALA 47 44 44 ALA ALA B . n B 1 48 ILE 48 45 45 ILE ILE B . n B 1 49 TYR 49 46 46 TYR TYR B . n B 1 50 ASP 50 47 47 ASP ASP B . n B 1 51 SER 51 48 48 SER SER B . n B 1 52 ALA 52 49 49 ALA ALA B . n B 1 53 ASP 53 50 50 ASP ASP B . n B 1 54 ILE 54 51 51 ILE ILE B . n B 1 55 ASN 55 52 52 ASN ASN B . n B 1 56 ALA 56 53 53 ALA ALA B . n B 1 57 PHE 57 54 54 PHE PHE B . n B 1 58 ALA 58 55 55 ALA ALA B . n B 1 59 THR 59 56 56 THR THR B . n B 1 60 GLY 60 57 57 GLY GLY B . n B 1 61 ALA 61 58 58 ALA ALA B . n B 1 62 LYS 62 59 59 LYS LYS B . n B 1 63 ARG 63 60 60 ARG ARG B . n B 1 64 ASP 64 61 61 ASP ASP B . n B 1 65 ASP 65 62 62 ASP ASP B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 LEU 67 64 64 LEU LEU B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 ALA 69 66 66 ALA ALA B . n B 1 70 VAL 70 67 67 VAL VAL B . n B 1 71 SER 71 68 68 SER SER B . n B 1 72 THR 72 69 69 THR THR B . n B 1 73 GLY 73 70 70 GLY GLY B . n B 1 74 LEU 74 71 71 LEU LEU B . n B 1 75 LEU 75 72 72 LEU LEU B . n B 1 76 HIS 76 73 73 HIS HIS B . n B 1 77 ASN 77 74 74 ASN ASN B . n B 1 78 MSE 78 75 75 MSE MSE B . n B 1 79 THR 79 76 76 THR THR B . n B 1 80 ARG 80 77 77 ARG ARG B . n B 1 81 ASP 81 78 78 ASP ASP B . n B 1 82 GLU 82 79 79 GLU GLU B . n B 1 83 ALA 83 80 80 ALA ALA B . n B 1 84 GLU 84 81 81 GLU GLU B . n B 1 85 ALA 85 82 82 ALA ALA B . n B 1 86 VAL 86 83 83 VAL VAL B . n B 1 87 LEU 87 84 84 LEU LEU B . n B 1 88 ALA 88 85 85 ALA ALA B . n B 1 89 HIS 89 86 86 HIS HIS B . n B 1 90 GLU 90 87 87 GLU GLU B . n B 1 91 VAL 91 88 88 VAL VAL B . n B 1 92 SER 92 89 89 SER SER B . n B 1 93 HIS 93 90 90 HIS HIS B . n B 1 94 ILE 94 91 91 ILE ILE B . n B 1 95 ALA 95 92 92 ALA ALA B . n B 1 96 ASN 96 93 93 ASN ASN B . n B 1 97 GLY 97 94 94 GLY GLY B . n B 1 98 ASP 98 95 95 ASP ASP B . n B 1 99 MSE 99 96 96 MSE MSE B . n B 1 100 VAL 100 97 97 VAL VAL B . n B 1 101 THR 101 98 98 THR THR B . n B 1 102 MSE 102 99 99 MSE MSE B . n B 1 103 THR 103 100 100 THR THR B . n B 1 104 LEU 104 101 101 LEU LEU B . n B 1 105 MSE 105 102 102 MSE MSE B . n B 1 106 GLN 106 103 103 GLN GLN B . n B 1 107 GLY 107 104 104 GLY GLY B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 105 105 CL CL A . D 3 NA 1 106 106 NA NA A . E 4 EDO 1 107 107 EDO EDO A . F 4 EDO 1 108 108 EDO EDO A . G 4 EDO 1 109 109 EDO EDO A . H 3 NA 1 105 105 NA NA B . I 4 EDO 1 106 106 EDO EDO B . J 4 EDO 1 107 107 EDO EDO B . K 5 GOL 1 108 108 GOL GOL B . L 6 HOH 1 110 110 HOH HOH A . L 6 HOH 2 111 111 HOH HOH A . L 6 HOH 3 112 112 HOH HOH A . L 6 HOH 4 113 113 HOH HOH A . L 6 HOH 5 114 114 HOH HOH A . L 6 HOH 6 115 115 HOH HOH A . L 6 HOH 7 116 116 HOH HOH A . L 6 HOH 8 117 117 HOH HOH A . L 6 HOH 9 118 118 HOH HOH A . L 6 HOH 10 119 119 HOH HOH A . L 6 HOH 11 120 120 HOH HOH A . L 6 HOH 12 121 121 HOH HOH A . L 6 HOH 13 122 122 HOH HOH A . L 6 HOH 14 123 123 HOH HOH A . L 6 HOH 15 124 124 HOH HOH A . L 6 HOH 16 125 125 HOH HOH A . L 6 HOH 17 126 126 HOH HOH A . L 6 HOH 18 127 127 HOH HOH A . L 6 HOH 19 128 128 HOH HOH A . L 6 HOH 20 129 129 HOH HOH A . L 6 HOH 21 130 130 HOH HOH A . L 6 HOH 22 131 131 HOH HOH A . L 6 HOH 23 132 132 HOH HOH A . L 6 HOH 24 133 133 HOH HOH A . L 6 HOH 25 134 134 HOH HOH A . L 6 HOH 26 135 135 HOH HOH A . L 6 HOH 27 136 136 HOH HOH A . L 6 HOH 28 137 137 HOH HOH A . L 6 HOH 29 138 138 HOH HOH A . L 6 HOH 30 139 139 HOH HOH A . L 6 HOH 31 140 140 HOH HOH A . L 6 HOH 32 141 141 HOH HOH A . L 6 HOH 33 142 142 HOH HOH A . L 6 HOH 34 143 143 HOH HOH A . L 6 HOH 35 144 144 HOH HOH A . L 6 HOH 36 145 145 HOH HOH A . L 6 HOH 37 146 146 HOH HOH A . L 6 HOH 38 147 147 HOH HOH A . L 6 HOH 39 148 148 HOH HOH A . L 6 HOH 40 149 149 HOH HOH A . L 6 HOH 41 150 150 HOH HOH A . L 6 HOH 42 151 151 HOH HOH A . L 6 HOH 43 152 152 HOH HOH A . L 6 HOH 44 153 153 HOH HOH A . L 6 HOH 45 154 154 HOH HOH A . L 6 HOH 46 155 155 HOH HOH A . L 6 HOH 47 156 156 HOH HOH A . L 6 HOH 48 157 157 HOH HOH A . L 6 HOH 49 158 158 HOH HOH A . L 6 HOH 50 159 159 HOH HOH A . L 6 HOH 51 160 160 HOH HOH A . L 6 HOH 52 161 161 HOH HOH A . L 6 HOH 53 162 162 HOH HOH A . L 6 HOH 54 163 163 HOH HOH A . L 6 HOH 55 164 164 HOH HOH A . L 6 HOH 56 165 165 HOH HOH A . L 6 HOH 57 166 166 HOH HOH A . L 6 HOH 58 167 167 HOH HOH A . L 6 HOH 59 168 168 HOH HOH A . L 6 HOH 60 169 169 HOH HOH A . L 6 HOH 61 170 170 HOH HOH A . L 6 HOH 62 171 171 HOH HOH A . L 6 HOH 63 172 172 HOH HOH A . L 6 HOH 64 173 173 HOH HOH A . L 6 HOH 65 174 174 HOH HOH A . L 6 HOH 66 175 175 HOH HOH A . L 6 HOH 67 176 176 HOH HOH A . L 6 HOH 68 177 177 HOH HOH A . L 6 HOH 69 178 178 HOH HOH A . L 6 HOH 70 179 179 HOH HOH A . L 6 HOH 71 180 180 HOH HOH A . L 6 HOH 72 181 181 HOH HOH A . L 6 HOH 73 182 182 HOH HOH A . L 6 HOH 74 183 183 HOH HOH A . L 6 HOH 75 184 184 HOH HOH A . L 6 HOH 76 185 185 HOH HOH A . L 6 HOH 77 186 186 HOH HOH A . L 6 HOH 78 187 187 HOH HOH A . L 6 HOH 79 188 188 HOH HOH A . L 6 HOH 80 189 189 HOH HOH A . L 6 HOH 81 190 190 HOH HOH A . L 6 HOH 82 191 191 HOH HOH A . L 6 HOH 83 192 192 HOH HOH A . L 6 HOH 84 193 193 HOH HOH A . L 6 HOH 85 194 194 HOH HOH A . L 6 HOH 86 195 195 HOH HOH A . L 6 HOH 87 196 196 HOH HOH A . L 6 HOH 88 197 197 HOH HOH A . L 6 HOH 89 198 198 HOH HOH A . L 6 HOH 90 199 199 HOH HOH A . L 6 HOH 91 200 200 HOH HOH A . L 6 HOH 92 201 201 HOH HOH A . L 6 HOH 93 202 202 HOH HOH A . L 6 HOH 94 203 203 HOH HOH A . L 6 HOH 95 204 204 HOH HOH A . L 6 HOH 96 205 205 HOH HOH A . L 6 HOH 97 206 206 HOH HOH A . L 6 HOH 98 207 207 HOH HOH A . L 6 HOH 99 208 208 HOH HOH A . L 6 HOH 100 209 209 HOH HOH A . L 6 HOH 101 210 210 HOH HOH A . L 6 HOH 102 211 211 HOH HOH A . L 6 HOH 103 212 212 HOH HOH A . L 6 HOH 104 213 213 HOH HOH A . L 6 HOH 105 214 214 HOH HOH A . L 6 HOH 106 215 215 HOH HOH A . L 6 HOH 107 216 216 HOH HOH A . L 6 HOH 108 217 217 HOH HOH A . M 6 HOH 1 169 169 HOH HOH B . M 6 HOH 2 170 170 HOH HOH B . M 6 HOH 3 171 171 HOH HOH B . M 6 HOH 4 172 172 HOH HOH B . M 6 HOH 5 173 173 HOH HOH B . M 6 HOH 6 174 174 HOH HOH B . M 6 HOH 7 175 175 HOH HOH B . M 6 HOH 8 176 176 HOH HOH B . M 6 HOH 9 177 177 HOH HOH B . M 6 HOH 10 178 178 HOH HOH B . M 6 HOH 11 179 179 HOH HOH B . M 6 HOH 12 180 180 HOH HOH B . M 6 HOH 13 181 181 HOH HOH B . M 6 HOH 14 182 182 HOH HOH B . M 6 HOH 15 183 183 HOH HOH B . M 6 HOH 16 184 184 HOH HOH B . M 6 HOH 17 185 185 HOH HOH B . M 6 HOH 18 186 186 HOH HOH B . M 6 HOH 19 187 187 HOH HOH B . M 6 HOH 20 188 188 HOH HOH B . M 6 HOH 21 189 189 HOH HOH B . M 6 HOH 22 190 190 HOH HOH B . M 6 HOH 23 191 191 HOH HOH B . M 6 HOH 24 192 192 HOH HOH B . M 6 HOH 25 193 193 HOH HOH B . M 6 HOH 26 194 194 HOH HOH B . M 6 HOH 27 195 195 HOH HOH B . M 6 HOH 28 196 196 HOH HOH B . M 6 HOH 29 197 197 HOH HOH B . M 6 HOH 30 198 198 HOH HOH B . M 6 HOH 31 199 199 HOH HOH B . M 6 HOH 32 200 200 HOH HOH B . M 6 HOH 33 201 201 HOH HOH B . M 6 HOH 34 202 202 HOH HOH B . M 6 HOH 35 203 203 HOH HOH B . M 6 HOH 36 204 204 HOH HOH B . M 6 HOH 37 205 205 HOH HOH B . M 6 HOH 38 206 206 HOH HOH B . M 6 HOH 39 207 207 HOH HOH B . M 6 HOH 40 208 208 HOH HOH B . M 6 HOH 41 209 209 HOH HOH B . M 6 HOH 42 210 210 HOH HOH B . M 6 HOH 43 211 211 HOH HOH B . M 6 HOH 44 212 212 HOH HOH B . M 6 HOH 45 213 213 HOH HOH B . M 6 HOH 46 214 214 HOH HOH B . M 6 HOH 47 215 215 HOH HOH B . M 6 HOH 48 216 216 HOH HOH B . M 6 HOH 49 217 217 HOH HOH B . M 6 HOH 50 218 218 HOH HOH B . M 6 HOH 51 219 219 HOH HOH B . M 6 HOH 52 220 220 HOH HOH B . M 6 HOH 53 221 221 HOH HOH B . M 6 HOH 54 222 222 HOH HOH B . M 6 HOH 55 223 223 HOH HOH B . M 6 HOH 56 224 224 HOH HOH B . M 6 HOH 57 225 225 HOH HOH B . M 6 HOH 58 226 226 HOH HOH B . M 6 HOH 59 227 227 HOH HOH B . M 6 HOH 60 228 228 HOH HOH B . M 6 HOH 61 229 229 HOH HOH B . M 6 HOH 62 230 230 HOH HOH B . M 6 HOH 63 231 231 HOH HOH B . M 6 HOH 64 232 232 HOH HOH B . M 6 HOH 65 233 233 HOH HOH B . M 6 HOH 66 234 234 HOH HOH B . M 6 HOH 67 235 235 HOH HOH B . M 6 HOH 68 236 236 HOH HOH B . M 6 HOH 69 237 237 HOH HOH B . M 6 HOH 70 238 238 HOH HOH B . M 6 HOH 71 239 239 HOH HOH B . M 6 HOH 72 240 240 HOH HOH B . M 6 HOH 73 241 241 HOH HOH B . M 6 HOH 74 242 242 HOH HOH B . M 6 HOH 75 243 243 HOH HOH B . M 6 HOH 76 244 244 HOH HOH B . M 6 HOH 77 245 245 HOH HOH B . M 6 HOH 78 246 246 HOH HOH B . M 6 HOH 79 247 247 HOH HOH B . M 6 HOH 80 248 248 HOH HOH B . M 6 HOH 81 249 249 HOH HOH B . M 6 HOH 82 250 250 HOH HOH B . M 6 HOH 83 251 251 HOH HOH B . M 6 HOH 84 252 252 HOH HOH B . M 6 HOH 85 253 253 HOH HOH B . M 6 HOH 86 254 254 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 7 A MSE 4 ? MET SELENOMETHIONINE 2 A MSE 15 A MSE 12 ? MET SELENOMETHIONINE 3 A MSE 43 A MSE 40 ? MET SELENOMETHIONINE 4 A MSE 78 A MSE 75 ? MET SELENOMETHIONINE 5 A MSE 99 A MSE 96 ? MET SELENOMETHIONINE 6 A MSE 102 A MSE 99 ? MET SELENOMETHIONINE 7 A MSE 105 A MSE 102 ? MET SELENOMETHIONINE 8 B MSE 7 B MSE 4 ? MET SELENOMETHIONINE 9 B MSE 15 B MSE 12 ? MET SELENOMETHIONINE 10 B MSE 43 B MSE 40 ? MET SELENOMETHIONINE 11 B MSE 78 B MSE 75 ? MET SELENOMETHIONINE 12 B MSE 99 B MSE 96 ? MET SELENOMETHIONINE 13 B MSE 102 B MSE 99 ? MET SELENOMETHIONINE 14 B MSE 105 B MSE 102 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M 2 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1310 ? 1 MORE -10.5 ? 1 'SSA (A^2)' 10750 ? 2 'ABSA (A^2)' 5170 ? 2 MORE -41.0 ? 2 'SSA (A^2)' 18940 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 21.8236666667 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 53 ? A ASP 50 ? 1_555 NA ? D NA . ? A NA 106 ? 1_555 O ? L HOH . ? A HOH 158 ? 1_555 89.0 ? 2 OD1 ? A ASP 53 ? A ASP 50 ? 1_555 NA ? D NA . ? A NA 106 ? 1_555 O ? L HOH . ? A HOH 200 ? 1_555 127.0 ? 3 O ? L HOH . ? A HOH 158 ? 1_555 NA ? D NA . ? A NA 106 ? 1_555 O ? L HOH . ? A HOH 200 ? 1_555 120.4 ? 4 OD1 ? B ASP 50 ? B ASP 47 ? 1_555 NA ? H NA . ? B NA 105 ? 1_555 OG1 ? B THR 72 ? B THR 69 ? 1_555 98.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-27 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 28.2481 _pdbx_refine_tls.origin_y -4.6905 _pdbx_refine_tls.origin_z -3.7483 _pdbx_refine_tls.T[1][1] -0.0434 _pdbx_refine_tls.T[2][2] -0.0305 _pdbx_refine_tls.T[3][3] -0.0374 _pdbx_refine_tls.T[1][2] -0.0088 _pdbx_refine_tls.T[1][3] -0.0099 _pdbx_refine_tls.T[2][3] 0.0094 _pdbx_refine_tls.L[1][1] 0.0366 _pdbx_refine_tls.L[2][2] 2.2667 _pdbx_refine_tls.L[3][3] 0.9810 _pdbx_refine_tls.L[1][2] -0.0682 _pdbx_refine_tls.L[1][3] -0.0331 _pdbx_refine_tls.L[2][3] 1.0902 _pdbx_refine_tls.S[1][1] -0.0222 _pdbx_refine_tls.S[1][2] 0.0369 _pdbx_refine_tls.S[1][3] 0.0314 _pdbx_refine_tls.S[2][1] -0.1987 _pdbx_refine_tls.S[2][2] 0.0018 _pdbx_refine_tls.S[2][3] 0.1267 _pdbx_refine_tls.S[3][1] -0.1074 _pdbx_refine_tls.S[3][2] -0.0412 _pdbx_refine_tls.S[3][3] 0.0203 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A -1 A 2 A 102 A 105 ? 'X-RAY DIFFRACTION' ? 2 1 B 4 B 7 B 104 B 107 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 HKL-3000 'data collection' . ? 2 HKL-3000 'data reduction' . ? 3 HKL-3000 'data scaling' . ? 4 MLPHARE phasing . ? 5 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 188 ? ? 1_555 O B HOH 177 ? ? 5_555 1.93 2 1 ND2 A ASN -1 ? ? 1_555 O A HOH 207 ? ? 3_665 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 15 ? ? -108.81 -70.72 2 1 GLU A 15 ? ? -108.81 -70.13 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ARG 60 ? A ARG 63 3 1 Y 1 A ASP 61 ? A ASP 64 4 1 Y 1 A GLY 104 ? A GLY 107 5 1 Y 1 B SER -2 ? B SER 1 6 1 Y 1 B ASN -1 ? B ASN 2 7 1 Y 1 B ALA 0 ? B ALA 3 8 1 Y 1 B SER 1 ? B SER 4 9 1 Y 1 B LYS 2 ? B LYS 5 10 1 Y 1 B GLY 3 ? B GLY 6 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'SODIUM ION' NA 4 1,2-ETHANEDIOL EDO 5 GLYCEROL GOL 6 water HOH #