HEADER    TRANSFERASE                             07-APR-08   3CRR              
TITLE     STRUCTURE OF TRNA DIMETHYLALLYLTRANSFERASE: RNA MODIFICATION THROUGH A
TITLE    2 CHANNEL                                                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE;        
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: IPP TRANSFERASE, ISOPENTENYL-DIPHOSPHATE:TRNA               
COMPND   5 ISOPENTENYLTRANSFERASE, IPTASE, IPPT, TRNA DMATASE;                  
COMPND   6 EC: 2.5.1.8;                                                         
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA;                         
SOURCE   3 ORGANISM_TAXID: 287;                                                 
SOURCE   4 GENE: MIAA;                                                          
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PLM-1                                     
KEYWDS    TRANSFERASE, ATP-BINDING, NUCLEOTIDE-BINDING, NUCLEOTIDYLTRANSFERASE, 
KEYWDS   2 TRNA PROCESSING                                                      
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    R.H.HUANG,W.XIE,C.ZHOU                                                
REVDAT   3   21-FEB-24 3CRR    1       REMARK SEQADV LINK                       
REVDAT   2   24-FEB-09 3CRR    1       VERSN                                    
REVDAT   1   29-APR-08 3CRR    0                                                
JRNL        AUTH   W.XIE,C.ZHOU,R.H.HUANG                                       
JRNL        TITL   STRUCTURE OF TRNA DIMETHYLALLYLTRANSFERASE: RNA MODIFICATION 
JRNL        TITL 2 THROUGH A CHANNEL                                            
JRNL        REF    J.MOL.BIOL.                   V. 367   872 2007              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   17292915                                                     
JRNL        DOI    10.1016/J.JMB.2007.01.048                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.90 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS                                                  
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 50.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 1.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 86.2                           
REMARK   3   NUMBER OF REFLECTIONS             : 22653                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                            
REMARK   3   R VALUE            (WORKING SET) : 0.209                           
REMARK   3   FREE R VALUE                     : 0.235                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 6.700                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1768                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 1845                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 19                                      
REMARK   3   SOLVENT ATOMS            : 115                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 38.88                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 6.57000                                              
REMARK   3    B22 (A**2) : 6.57000                                              
REMARK   3    B33 (A**2) : -13.14000                                            
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.006                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.294                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.332 ; 1.500                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 1.980 ; 2.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 2.123 ; 2.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 3.217 ; 2.500                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : 51.56                                                
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : CNS_TOPPAR:PROTEIN_REP.PARAM                   
REMARK   3  PARAMETER FILE  2  : CNS_TOPPAR:WATER_REP.PARAM                     
REMARK   3  PARAMETER FILE  3  : CNS_TOPPAR:ION.PARAM                           
REMARK   3  PARAMETER FILE  4  : PP.PAR                                         
REMARK   3  PARAMETER FILE  5  : TRIS.PAR                                       
REMARK   3  PARAMETER FILE  6  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3  TOPOLOGY FILE  2   : NULL                                           
REMARK   3  TOPOLOGY FILE  3   : NULL                                           
REMARK   3  TOPOLOGY FILE  4   : NULL                                           
REMARK   3  TOPOLOGY FILE  5   : NULL                                           
REMARK   3  TOPOLOGY FILE  6   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 3CRR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-APR-08.                  
REMARK 100 THE DEPOSITION ID IS D_1000047133.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 15-APR-06                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-BM                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.98                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : NULL                               
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                               
REMARK 200  DATA SCALING SOFTWARE          : NULL                               
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 25456                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.900                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : NULL                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 47.50                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 6000, PH 8.5, VAPOR DIFFUSION,       
REMARK 280  HANGING DROP, TEMPERATURE 278K                                      
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -Y,X,Z+1/4                                              
REMARK 290       4555   Y,-X,Z+3/4                                              
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       28.90450            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       14.45225            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000       43.35675            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 465     LEU A   114                                                      
REMARK 465     ALA A   115                                                      
REMARK 465     ASP A   116                                                      
REMARK 465     MET A   117                                                      
REMARK 465     PRO A   118                                                      
REMARK 465     GLY A   119                                                      
REMARK 465     ALA A   120                                                      
REMARK 465     ASP A   121                                                      
REMARK 465     PRO A   122                                                      
REMARK 465     GLU A   123                                                      
REMARK 465     VAL A   124                                                      
REMARK 465     ARG A   125                                                      
REMARK 465     ALA A   126                                                      
REMARK 465     ALA A   127                                                      
REMARK 465     ILE A   128                                                      
REMARK 465     GLU A   129                                                      
REMARK 465     ALA A   130                                                      
REMARK 465     GLU A   131                                                      
REMARK 465     ALA A   132                                                      
REMARK 465     GLN A   133                                                      
REMARK 465     ALA A   134                                                      
REMARK 465     GLU A   135                                                      
REMARK 465     GLY A   136                                                      
REMARK 465     TRP A   137                                                      
REMARK 465     GLU A   138                                                      
REMARK 465     ALA A   139                                                      
REMARK 465     LEU A   140                                                      
REMARK 465     HIS A   141                                                      
REMARK 465     ARG A   142                                                      
REMARK 465     GLN A   143                                                      
REMARK 465     LEU A   144                                                      
REMARK 465     ALA A   145                                                      
REMARK 465     GLU A   146                                                      
REMARK 465     VAL A   147                                                      
REMARK 465     ASP A   148                                                      
REMARK 465     PRO A   149                                                      
REMARK 465     GLU A   150                                                      
REMARK 465     SER A   151                                                      
REMARK 465     ALA A   152                                                      
REMARK 465     ALA A   153                                                      
REMARK 465     ARG A   154                                                      
REMARK 465     ILE A   155                                                      
REMARK 465     HIS A   156                                                      
REMARK 465     PRO A   157                                                      
REMARK 465     ASN A   158                                                      
REMARK 465     ASP A   159                                                      
REMARK 465     PRO A   160                                                      
REMARK 465     GLN A   161                                                      
REMARK 465     ARG A   162                                                      
REMARK 465     LEU A   163                                                      
REMARK 465     MET A   164                                                      
REMARK 465     ARG A   165                                                      
REMARK 465     ALA A   166                                                      
REMARK 465     LEU A   167                                                      
REMARK 465     GLU A   168                                                      
REMARK 465     VAL A   169                                                      
REMARK 465     TYR A   170                                                      
REMARK 465     ARG A   171                                                      
REMARK 465     LEU A   172                                                      
REMARK 465     GLY A   173                                                      
REMARK 465     GLY A   174                                                      
REMARK 465     VAL A   175                                                      
REMARK 465     SER A   176                                                      
REMARK 465     MET A   177                                                      
REMARK 465     SER A   178                                                      
REMARK 465     ASP A   179                                                      
REMARK 465     LEU A   180                                                      
REMARK 465     ARG A   181                                                      
REMARK 465     ARG A   182                                                      
REMARK 465     ARG A   183                                                      
REMARK 465     GLN A   184                                                      
REMARK 465     SER A   185                                                      
REMARK 465     ALA A   186                                                      
REMARK 465     GLU A   187                                                      
REMARK 465     LYS A   188                                                      
REMARK 465     ALA A   189                                                      
REMARK 465     ASP A   190                                                      
REMARK 465     PHE A   191                                                      
REMARK 465     ASP A   192                                                      
REMARK 465     ALA A   193                                                      
REMARK 465     SER A   194                                                      
REMARK 465     GLY A   195                                                      
REMARK 465     ARG A   196                                                      
REMARK 465     ASN A   197                                                      
REMARK 465     GLN A   198                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A  15        3.98     81.35                                   
REMARK 500    GLU A 112      -84.44   -107.84                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MG A 324  MG                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 THR A  19   OG1                                                    
REMARK 620 2 DPO A 326   O3  166.7                                              
REMARK 620 3 DPO A 326   O7   92.8  74.8                                        
REMARK 620 4 HOH A 397   O   110.2  82.8 155.4                                  
REMARK 620 5 HOH A 398   O    89.7  87.1  97.1  91.7                            
REMARK 620 6 HOH A 423   O    92.0  92.0  86.5  84.2 175.8                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 324                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 325                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DPO A 326                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 327                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3CRM   RELATED DB: PDB                                   
REMARK 900 STRUCTURE OF TRNA DIMETHYLALLYLTRANSFERASE: RNA MODIFICATION         
REMARK 900 THROUGH A CHANNEL                                                    
REMARK 900 RELATED ID: 3CRR   RELATED DB: PDB                                   
REMARK 900 STRUCTURE OF TRNA DIMETHYLALLYLTRANSFERASE: RNA MODIFICATION         
REMARK 900 THROUGH A CHANNEL                                                    
DBREF  3CRR A    1   323  UNP    Q9HUL9   MIAA_PSEAE       1    323             
SEQADV 3CRR ARG A  314  UNP  Q9HUL9    LYS   314 CONFLICT                       
SEQRES   1 A  323  MET SER SER LEU PRO PRO ALA ILE PHE LEU MET GLY PRO          
SEQRES   2 A  323  THR ALA ALA GLY LYS THR ASP LEU ALA MET ALA LEU ALA          
SEQRES   3 A  323  ASP ALA LEU PRO CYS GLU LEU ILE SER VAL ASP SER ALA          
SEQRES   4 A  323  LEU ILE TYR ARG GLY MET ASP ILE GLY THR ALA LYS PRO          
SEQRES   5 A  323  SER ARG GLU LEU LEU ALA ARG TYR PRO HIS ARG LEU ILE          
SEQRES   6 A  323  ASP ILE ARG ASP PRO ALA GLU SER TYR SER ALA ALA GLU          
SEQRES   7 A  323  PHE ARG ALA ASP ALA LEU ALA ALA MET ALA LYS ALA THR          
SEQRES   8 A  323  ALA ARG GLY ARG ILE PRO LEU LEU VAL GLY GLY THR MET          
SEQRES   9 A  323  LEU TYR TYR LYS ALA LEU LEU GLU GLY LEU ALA ASP MET          
SEQRES  10 A  323  PRO GLY ALA ASP PRO GLU VAL ARG ALA ALA ILE GLU ALA          
SEQRES  11 A  323  GLU ALA GLN ALA GLU GLY TRP GLU ALA LEU HIS ARG GLN          
SEQRES  12 A  323  LEU ALA GLU VAL ASP PRO GLU SER ALA ALA ARG ILE HIS          
SEQRES  13 A  323  PRO ASN ASP PRO GLN ARG LEU MET ARG ALA LEU GLU VAL          
SEQRES  14 A  323  TYR ARG LEU GLY GLY VAL SER MET SER ASP LEU ARG ARG          
SEQRES  15 A  323  ARG GLN SER ALA GLU LYS ALA ASP PHE ASP ALA SER GLY          
SEQRES  16 A  323  ARG ASN GLN LEU PRO TYR THR VAL ALA GLN LEU ALA ILE          
SEQRES  17 A  323  ALA PRO GLU GLN ARG GLN VAL LEU HIS ALA ARG ILE ALA          
SEQRES  18 A  323  GLN ARG PHE ARG GLN MET LEU GLU GLN GLY PHE ILE ALA          
SEQRES  19 A  323  GLU VAL GLU ALA LEU HIS ALA ARG SER ASP LEU HIS ALA          
SEQRES  20 A  323  GLY LEU PRO SER ILE ARG ALA VAL GLY TYR ARG GLN VAL          
SEQRES  21 A  323  TRP ASP TYR LEU ASP GLY LYS LEU SER TYR ALA GLU MET          
SEQRES  22 A  323  THR GLU ARG GLY ILE ILE ALA THR ARG GLN LEU ALA LYS          
SEQRES  23 A  323  ARG GLN PHE THR TRP LEU ARG SER TRP SER HIS LEU HIS          
SEQRES  24 A  323  TRP MET ASP SER LEU ALA GLY ASP ASN LEU PRO ARG ALA          
SEQRES  25 A  323  LEU ARG TYR LEU LYS THR VAL SER ILE LEU ALA                  
HET     MG  A 324       1                                                       
HET     CL  A 325       1                                                       
HET    DPO  A 326       9                                                       
HET    TRS  A 327       8                                                       
HETNAM      MG MAGNESIUM ION                                                    
HETNAM      CL CHLORIDE ION                                                     
HETNAM     DPO DIPHOSPHATE                                                      
HETNAM     TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL                         
HETSYN     TRS TRIS BUFFER                                                      
FORMUL   2   MG    MG 2+                                                        
FORMUL   3   CL    CL 1-                                                        
FORMUL   4  DPO    O7 P2 4-                                                     
FORMUL   5  TRS    C4 H12 N O3 1+                                               
FORMUL   6  HOH   *115(H2 O)                                                    
HELIX    1   1 GLY A   17  ASP A   27  1                                  11    
HELIX    2   2 SER A   53  TYR A   60  1                                   8    
HELIX    3   3 SER A   75  ARG A   93  1                                  19    
HELIX    4   4 THR A  103  GLU A  112  1                                  10    
HELIX    5   5 GLN A  212  GLN A  230  1                                  19    
HELIX    6   6 GLY A  231  ALA A  241  1                                  11    
HELIX    7   7 PRO A  250  ALA A  254  5                                   5    
HELIX    8   8 GLY A  256  ASP A  265  1                                  10    
HELIX    9   9 SER A  269  SER A  294  1                                  26    
HELIX   10  10 ASP A  307  LEU A  316  1                                  10    
SHEET    1   A 6 HIS A  62  ARG A  63  0                                        
SHEET    2   A 6 CYS A  31  SER A  35  1  N  SER A  35   O  ARG A  63           
SHEET    3   A 6 ILE A  96  VAL A 100  1  O  LEU A  98   N  GLU A  32           
SHEET    4   A 6 PRO A   6  MET A  11  1  N  LEU A  10   O  LEU A  99           
SHEET    5   A 6 THR A 202  ALA A 209  1  O  LEU A 206   N  PHE A   9           
SHEET    6   A 6 HIS A 299  ASP A 302  1  O  HIS A 299   N  GLN A 205           
LINK         OG1 THR A  19                MG    MG A 324     1555   1555  2.18  
LINK        MG    MG A 324                 O3  DPO A 326     1555   1555  2.11  
LINK        MG    MG A 324                 O7  DPO A 326     1555   1555  2.04  
LINK        MG    MG A 324                 O   HOH A 397     1555   1555  2.26  
LINK        MG    MG A 324                 O   HOH A 398     1555   1555  2.17  
LINK        MG    MG A 324                 O   HOH A 423     1555   1555  2.23  
SITE     1 AC1  4 THR A  19  HOH A 397  HOH A 398  HOH A 423                    
SITE     1 AC2  4 ASP A  37  LEU A  40  HOH A 384  HOH A 397                    
SITE     1 AC3 14 THR A  14  ALA A  15  ALA A  16  GLY A  17                    
SITE     2 AC3 14 LYS A  18  THR A  19  ARG A 223  HOH A 337                    
SITE     3 AC3 14 HOH A 378  HOH A 384  HOH A 395  HOH A 397                    
SITE     4 AC3 14 HOH A 398  HOH A 423                                          
SITE     1 AC4  9 THR A  14  ASP A  37  ALA A  39  GLY A  48                    
SITE     2 AC4  9 THR A  49  MET A 227  HOH A 329  HOH A 337                    
SITE     3 AC4  9 HOH A 339                                                     
CRYST1   76.230   76.230   57.809  90.00  90.00  90.00 P 41          4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.013118  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.013118  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.017298        0.00000