HEADER SIGNALING PROTEIN 16-APR-08 3CUC TITLE CRYSTAL STRUCTURE OF A FIC DOMAIN CONTAINING SIGNALING PROTEIN TITLE 2 (BT_2513) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.71 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN OF UNKNOWN FUNCTION WITH A FIC DOMAIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 1-290; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES THETAIOTAOMICRON VPI-5482; SOURCE 3 ORGANISM_TAXID: 226186; SOURCE 4 STRAIN: VPI-5482 / DSM 2079 / NCTC 10582 / E50; SOURCE 5 ATCC: 29148; SOURCE 6 GENE: NP_811426.1, BT_2513; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: HK100; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS FIC PROTEIN FAMILY, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, SIGNALING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 01-FEB-23 3CUC 1 SEQADV REVDAT 6 24-JUL-19 3CUC 1 REMARK LINK REVDAT 5 25-OCT-17 3CUC 1 REMARK REVDAT 4 13-JUL-11 3CUC 1 VERSN REVDAT 3 28-JUL-10 3CUC 1 HEADER TITLE KEYWDS REVDAT 2 24-FEB-09 3CUC 1 VERSN REVDAT 1 29-APR-08 3CUC 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PROTEIN OF UNKNOWN FUNCTION WITH A FIC JRNL TITL 2 DOMAIN (NP_811426.1) FROM BACTEROIDES THETAIOTAOMICRON JRNL TITL 3 VPI-5482 AT 2.71 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36802 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1840 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2563 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE SET COUNT : 142 REMARK 3 BIN FREE R VALUE : 0.3350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4221 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 59.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.09000 REMARK 3 B22 (A**2) : 1.09000 REMARK 3 B33 (A**2) : -1.63000 REMARK 3 B12 (A**2) : 0.54000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.297 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.238 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.182 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.215 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.900 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4319 ; 0.008 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2902 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5855 ; 1.021 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7095 ; 0.808 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 527 ; 4.850 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;38.006 ;24.703 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 748 ;14.480 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;15.212 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 649 ; 0.056 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4772 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 852 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 995 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2767 ; 0.167 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2179 ; 0.182 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 2178 ; 0.083 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 67 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 16 ; 0.174 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 24 ; 0.276 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 4 ; 0.076 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2704 ; 1.067 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1066 ; 0.201 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4244 ; 1.869 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1843 ; 3.374 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1610 ; 5.041 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 10 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 4 A 7 1 REMARK 3 1 B 4 B 7 1 REMARK 3 2 A 9 A 31 1 REMARK 3 2 B 9 B 31 1 REMARK 3 3 A 33 A 52 1 REMARK 3 3 B 33 B 52 1 REMARK 3 4 A 72 A 109 1 REMARK 3 4 B 72 B 109 1 REMARK 3 5 A 129 A 148 4 REMARK 3 5 B 129 B 148 4 REMARK 3 6 A 149 A 222 1 REMARK 3 6 B 149 B 222 1 REMARK 3 7 A 224 A 231 1 REMARK 3 7 B 224 B 231 1 REMARK 3 8 A 233 A 245 4 REMARK 3 8 B 233 B 245 4 REMARK 3 9 A 246 A 251 1 REMARK 3 9 B 246 B 251 1 REMARK 3 10 A 253 A 280 1 REMARK 3 10 B 253 B 280 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 2762 ; 0.030 ; 0.050 REMARK 3 MEDIUM POSITIONAL 1 A (A): 324 ; 0.450 ; 0.500 REMARK 3 TIGHT THERMAL 1 A (A**2): 2762 ; 0.180 ; 1.000 REMARK 3 MEDIUM THERMAL 1 A (A**2): 324 ; 0.460 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 282 REMARK 3 ORIGIN FOR THE GROUP (A): 22.3659 64.3689 21.0885 REMARK 3 T TENSOR REMARK 3 T11: -0.0165 T22: 0.4913 REMARK 3 T33: 0.0247 T12: 0.1037 REMARK 3 T13: 0.0135 T23: 0.1318 REMARK 3 L TENSOR REMARK 3 L11: 3.2763 L22: 1.5192 REMARK 3 L33: 0.1600 L12: -0.6207 REMARK 3 L13: -0.7204 L23: 0.0893 REMARK 3 S TENSOR REMARK 3 S11: 0.0975 S12: 0.7228 S13: -0.0540 REMARK 3 S21: -0.1124 S22: 0.1154 S23: 0.2063 REMARK 3 S31: 0.0064 S32: -0.4889 S33: -0.2128 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 4 B 285 REMARK 3 ORIGIN FOR THE GROUP (A): 62.1228 51.6956 25.4737 REMARK 3 T TENSOR REMARK 3 T11: -0.2210 T22: -0.2096 REMARK 3 T33: -0.2022 T12: -0.0151 REMARK 3 T13: 0.0015 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.1664 L22: 0.7113 REMARK 3 L33: 1.5133 L12: -0.1195 REMARK 3 L13: -0.4176 L23: -0.2699 REMARK 3 S TENSOR REMARK 3 S11: -0.0037 S12: -0.0993 S13: -0.0690 REMARK 3 S21: 0.1303 S22: 0.0166 S23: 0.0989 REMARK 3 S31: -0.1135 S32: -0.1603 S33: -0.0128 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. REMARK 3 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. REMARK 3 3. DENSITY FOR LOOP RESIDUES A133-154 IS POOR AND REMARK 3 MODEL IS BUILT BASED ON NCS. REMARK 3 4. SOLVENTS WERE NOT MODELED DUE TO LIMITED RESOLUTION. REMARK 3 THERE ARE UNMODELED DENSITIES (LIKELY SOLVENTS) NEAR THE REMARK 3 PUTATIVE ACTIVE SITE (AROUND HIS 192). REMARK 4 REMARK 4 3CUC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-08. REMARK 100 THE DEPOSITION ID IS D_1000047219. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91837, 0.97954, 0.97882 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 (HORIZONTAL FOCUSING) REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36830 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.710 REMARK 200 RESOLUTION RANGE LOW (A) : 29.273 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.600 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : 0.15500 REMARK 200 FOR THE DATA SET : 4.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.97000 REMARK 200 R SYM FOR SHELL (I) : 0.97000 REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHELXD, AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NANODROP, 15.1% 2-METHYL-2,4 REMARK 280 -PENTANEDIOL, 0.1M MES PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.24100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 80.48200 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 80.48200 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.24100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 GLY A 2 REMARK 465 ILE A 3 REMARK 465 ASN A 114 REMARK 465 ALA A 115 REMARK 465 LYS A 116 REMARK 465 THR A 117 REMARK 465 PRO A 118 REMARK 465 ASP A 119 REMARK 465 GLY A 120 REMARK 465 GLN A 121 REMARK 465 ASP A 122 REMARK 465 ILE A 123 REMARK 465 ARG A 124 REMARK 465 MSE A 125 REMARK 465 GLN A 126 REMARK 465 ILE A 127 REMARK 465 LYS A 128 REMARK 465 ALA A 142 REMARK 465 THR A 143 REMARK 465 GLU A 283 REMARK 465 GLU A 284 REMARK 465 GLY A 285 REMARK 465 ASP A 286 REMARK 465 PHE A 287 REMARK 465 ASP A 288 REMARK 465 LYS A 289 REMARK 465 LYS A 290 REMARK 465 GLY B 0 REMARK 465 MSE B 1 REMARK 465 GLY B 2 REMARK 465 ILE B 3 REMARK 465 LYS B 113 REMARK 465 ASN B 114 REMARK 465 ALA B 115 REMARK 465 LYS B 116 REMARK 465 THR B 117 REMARK 465 PRO B 118 REMARK 465 ASP B 119 REMARK 465 GLY B 120 REMARK 465 GLN B 121 REMARK 465 ASP B 122 REMARK 465 ILE B 123 REMARK 465 ARG B 124 REMARK 465 MSE B 125 REMARK 465 GLN B 126 REMARK 465 ASP B 286 REMARK 465 PHE B 287 REMARK 465 ASP B 288 REMARK 465 LYS B 289 REMARK 465 LYS B 290 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 4 OG REMARK 470 LYS A 14 CE NZ REMARK 470 GLU A 60 CD OE1 OE2 REMARK 470 LYS A 113 CG CD CE NZ REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 ARG A 135 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 137 CG OD1 ND2 REMARK 470 LEU A 140 CG CD1 CD2 REMARK 470 THR A 141 OG1 CG2 REMARK 470 GLU A 145 CG CD OE1 OE2 REMARK 470 SER A 148 OG REMARK 470 GLU A 195 CG CD OE1 OE2 REMARK 470 HIS A 233 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 470 SER B 4 OG REMARK 470 ILE B 127 CG1 CG2 CD1 REMARK 470 LYS B 128 CG CD CE NZ REMARK 470 ARG B 135 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 281 -50.28 -123.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 371850 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. REMARK 999 THE CLONED CONSTRUCT CONTAINS RESIDUES 1-290 OF THE FULL REMARK 999 LENGTH PROTEIN. DBREF 3CUC A 1 290 UNP Q8A4T4 Q8A4T4_BACTN 1 290 DBREF 3CUC B 1 290 UNP Q8A4T4 Q8A4T4_BACTN 1 290 SEQADV 3CUC GLY A 0 UNP Q8A4T4 EXPRESSION TAG SEQADV 3CUC GLY B 0 UNP Q8A4T4 EXPRESSION TAG SEQRES 1 A 291 GLY MSE GLY ILE SER ASN ILE LYS GLN LEU TYR SER LYS SEQRES 2 A 291 TRP LYS SER LEU GLN PRO LEU LYS PRO GLU ASP LEU LYS SEQRES 3 A 291 ARG TRP ASN ASP LYS PHE LYS LEU GLU PHE ASN TYR ASN SEQRES 4 A 291 SER ASN HIS LEU GLU GLY ASN THR LEU THR TYR GLY GLN SEQRES 5 A 291 THR LYS LEU LEU LEU MSE PHE GLY GLU THR SER GLY ASN SEQRES 6 A 291 ALA SER LEU LYS ASP TYR GLU GLU MSE LYS ALA HIS ASN SEQRES 7 A 291 VAL GLY LEU GLU MSE ILE LYS GLN GLU ALA GLN ASP LYS SEQRES 8 A 291 GLU ARG PRO LEU THR GLU SER PHE ILE ARG GLU LEU ASN SEQRES 9 A 291 ARG THR ILE LEU VAL GLN ASP TYR TRP LYS ASN ALA LYS SEQRES 10 A 291 THR PRO ASP GLY GLN ASP ILE ARG MSE GLN ILE LYS VAL SEQRES 11 A 291 GLY GLU TYR LYS SER ARG PRO ASN SER VAL LEU THR ALA SEQRES 12 A 291 THR GLY GLU VAL PHE SER TYR ALA SER PRO GLU GLU THR SEQRES 13 A 291 PRO ALA PHE MSE THR SER LEU VAL ASP TRP TYR ASN LEU SEQRES 14 A 291 GLU ALA ASP LYS GLY ILE LEU THR PRO VAL GLU LEU ALA SEQRES 15 A 291 ALA LEU LEU HIS TYR ARG TYR ILE ARG ILE HIS PRO PHE SEQRES 16 A 291 GLU ASP GLY ASN GLY ARG ILE ALA ARG LEU LEU VAL ASN SEQRES 17 A 291 PHE VAL LEU HIS ARG TYR GLY TYR PRO MSE ILE VAL ILE SEQRES 18 A 291 HIS SER GLU ASP LYS SER ASN TYR LEU ASN ILE LEU HIS SEQRES 19 A 291 GLN CYS ASP VAL GLU ALA GLY LEU THR PRO SER ASP GLY SEQRES 20 A 291 ALA ASN ALA THR LEU ASN ASP ILE LEU PRO PHE VAL ASN SEQRES 21 A 291 TYR LEU SER SER CYS LEU ILE ARG SER LEU THR LEU ALA SEQRES 22 A 291 ILE LYS ALA ALA LYS GLY GLU SER ILE GLU GLU GLU GLY SEQRES 23 A 291 ASP PHE ASP LYS LYS SEQRES 1 B 291 GLY MSE GLY ILE SER ASN ILE LYS GLN LEU TYR SER LYS SEQRES 2 B 291 TRP LYS SER LEU GLN PRO LEU LYS PRO GLU ASP LEU LYS SEQRES 3 B 291 ARG TRP ASN ASP LYS PHE LYS LEU GLU PHE ASN TYR ASN SEQRES 4 B 291 SER ASN HIS LEU GLU GLY ASN THR LEU THR TYR GLY GLN SEQRES 5 B 291 THR LYS LEU LEU LEU MSE PHE GLY GLU THR SER GLY ASN SEQRES 6 B 291 ALA SER LEU LYS ASP TYR GLU GLU MSE LYS ALA HIS ASN SEQRES 7 B 291 VAL GLY LEU GLU MSE ILE LYS GLN GLU ALA GLN ASP LYS SEQRES 8 B 291 GLU ARG PRO LEU THR GLU SER PHE ILE ARG GLU LEU ASN SEQRES 9 B 291 ARG THR ILE LEU VAL GLN ASP TYR TRP LYS ASN ALA LYS SEQRES 10 B 291 THR PRO ASP GLY GLN ASP ILE ARG MSE GLN ILE LYS VAL SEQRES 11 B 291 GLY GLU TYR LYS SER ARG PRO ASN SER VAL LEU THR ALA SEQRES 12 B 291 THR GLY GLU VAL PHE SER TYR ALA SER PRO GLU GLU THR SEQRES 13 B 291 PRO ALA PHE MSE THR SER LEU VAL ASP TRP TYR ASN LEU SEQRES 14 B 291 GLU ALA ASP LYS GLY ILE LEU THR PRO VAL GLU LEU ALA SEQRES 15 B 291 ALA LEU LEU HIS TYR ARG TYR ILE ARG ILE HIS PRO PHE SEQRES 16 B 291 GLU ASP GLY ASN GLY ARG ILE ALA ARG LEU LEU VAL ASN SEQRES 17 B 291 PHE VAL LEU HIS ARG TYR GLY TYR PRO MSE ILE VAL ILE SEQRES 18 B 291 HIS SER GLU ASP LYS SER ASN TYR LEU ASN ILE LEU HIS SEQRES 19 B 291 GLN CYS ASP VAL GLU ALA GLY LEU THR PRO SER ASP GLY SEQRES 20 B 291 ALA ASN ALA THR LEU ASN ASP ILE LEU PRO PHE VAL ASN SEQRES 21 B 291 TYR LEU SER SER CYS LEU ILE ARG SER LEU THR LEU ALA SEQRES 22 B 291 ILE LYS ALA ALA LYS GLY GLU SER ILE GLU GLU GLU GLY SEQRES 23 B 291 ASP PHE ASP LYS LYS MODRES 3CUC MSE A 57 MET SELENOMETHIONINE MODRES 3CUC MSE A 73 MET SELENOMETHIONINE MODRES 3CUC MSE A 82 MET SELENOMETHIONINE MODRES 3CUC MSE A 159 MET SELENOMETHIONINE MODRES 3CUC MSE A 217 MET SELENOMETHIONINE MODRES 3CUC MSE B 57 MET SELENOMETHIONINE MODRES 3CUC MSE B 73 MET SELENOMETHIONINE MODRES 3CUC MSE B 82 MET SELENOMETHIONINE MODRES 3CUC MSE B 159 MET SELENOMETHIONINE MODRES 3CUC MSE B 217 MET SELENOMETHIONINE HET MSE A 57 13 HET MSE A 73 8 HET MSE A 82 8 HET MSE A 159 8 HET MSE A 217 8 HET MSE B 57 8 HET MSE B 73 8 HET MSE B 82 8 HET MSE B 159 8 HET MSE B 217 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 10(C5 H11 N O2 SE) HELIX 1 1 SER A 4 LEU A 16 1 13 HELIX 2 2 LYS A 20 LEU A 42 1 23 HELIX 3 3 THR A 48 GLY A 59 1 12 HELIX 4 4 SER A 66 ASP A 89 1 24 HELIX 5 5 THR A 95 LEU A 107 1 13 HELIX 6 6 GLU A 154 GLY A 173 1 20 HELIX 7 7 THR A 176 HIS A 192 1 17 HELIX 8 8 GLY A 197 TYR A 213 1 17 HELIX 9 9 HIS A 221 GLU A 223 5 3 HELIX 10 10 ASP A 224 GLY A 240 1 17 HELIX 11 11 THR A 242 ASN A 248 1 7 HELIX 12 12 ILE A 254 LYS A 277 1 24 HELIX 13 13 SER B 4 LEU B 16 1 13 HELIX 14 14 LYS B 20 LEU B 42 1 23 HELIX 15 15 THR B 48 GLY B 59 1 12 HELIX 16 16 SER B 66 ASP B 89 1 24 HELIX 17 17 THR B 95 LEU B 107 1 13 HELIX 18 18 GLU B 154 GLY B 173 1 20 HELIX 19 19 THR B 176 HIS B 192 1 17 HELIX 20 20 GLY B 197 TYR B 213 1 17 HELIX 21 21 HIS B 221 GLU B 223 5 3 HELIX 22 22 ASP B 224 GLY B 240 1 17 HELIX 23 23 THR B 242 ASN B 248 1 7 HELIX 24 24 ILE B 254 LYS B 277 1 24 SHEET 1 A 2 VAL A 139 LEU A 140 0 SHEET 2 A 2 VAL A 146 PHE A 147 -1 O PHE A 147 N VAL A 139 SHEET 1 B 2 VAL B 139 LEU B 140 0 SHEET 2 B 2 VAL B 146 PHE B 147 -1 O PHE B 147 N VAL B 139 LINK C LEU A 56 N MSE A 57 1555 1555 1.34 LINK C MSE A 57 N PHE A 58 1555 1555 1.33 LINK C GLU A 72 N MSE A 73 1555 1555 1.33 LINK C MSE A 73 N LYS A 74 1555 1555 1.32 LINK C GLU A 81 N MSE A 82 1555 1555 1.33 LINK C MSE A 82 N ILE A 83 1555 1555 1.33 LINK C PHE A 158 N MSE A 159 1555 1555 1.33 LINK C MSE A 159 N THR A 160 1555 1555 1.33 LINK C PRO A 216 N MSE A 217 1555 1555 1.32 LINK C MSE A 217 N ILE A 218 1555 1555 1.33 LINK C LEU B 56 N MSE B 57 1555 1555 1.33 LINK C MSE B 57 N PHE B 58 1555 1555 1.33 LINK C GLU B 72 N MSE B 73 1555 1555 1.34 LINK C MSE B 73 N LYS B 74 1555 1555 1.34 LINK C GLU B 81 N MSE B 82 1555 1555 1.33 LINK C MSE B 82 N ILE B 83 1555 1555 1.34 LINK C PHE B 158 N MSE B 159 1555 1555 1.33 LINK C MSE B 159 N THR B 160 1555 1555 1.33 LINK C PRO B 216 N MSE B 217 1555 1555 1.33 LINK C MSE B 217 N ILE B 218 1555 1555 1.33 CISPEP 1 GLN A 17 PRO A 18 0 -1.92 CISPEP 2 GLN B 17 PRO B 18 0 -2.15 CRYST1 138.725 138.725 120.723 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007209 0.004162 0.000000 0.00000 SCALE2 0.000000 0.008324 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008283 0.00000