data_3CUN # _entry.id 3CUN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3CUN pdb_00003cun 10.2210/pdb3cun/pdb NDB PR0341 ? ? RCSB RCSB047230 ? ? WWPDB D_1000047230 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 3CUL _pdbx_database_related.details 'Aminoacyl-tRNA synthetase ribozyme' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3CUN _pdbx_database_status.recvd_initial_deposition_date 2008-04-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Xiao, H.' 1 'Murakami, H.' 2 'Suga, H.' 3 ;Ferre-D'Amare, A.R. ; 4 # _citation.id primary _citation.title 'Structural basis of specific tRNA aminoacylation by a small in vitro selected ribozyme.' _citation.journal_abbrev Nature _citation.journal_volume 454 _citation.page_first 358 _citation.page_last 361 _citation.year 2008 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18548004 _citation.pdbx_database_id_DOI 10.1038/nature07033 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xiao, H.' 1 ? primary 'Murakami, H.' 2 ? primary 'Suga, H.' 3 ? primary ;Ferre-D'Amare, A.R. ; 4 ? # _cell.entry_id 3CUN _cell.length_a 191.368 _cell.length_b 48.076 _cell.length_c 90.645 _cell.angle_alpha 90.00 _cell.angle_beta 93.50 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CUN _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA (92-MER)' 29820.535 2 ? ? ? Flexizyme 2 polymer man 'U1 small nuclear ribonucleoprotein A' 11574.792 2 ? 'Y31H, Q36R' 'UNP residues 1-98' ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 9 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 5 non-polymer syn 'COBALT (II) ION' 58.933 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'U1 snRNP protein A, U1A protein, U1-A' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes ;(GTP)GAUGGCGAAAGCCAUUUCCGCAGGCCCCAUUGCACUCCGGGGUAUUGGCGUUAGGUGGUGGUACGAGGUUCGAAU CCUCGUACCGCAGCCA ; ;GGAUGGCGAAAGCCAUUUCCGCAGGCCCCAUUGCACUCCGGGGUAUUGGCGUUAGGUGGUGGUACGAGGUUCGAAUCCUC GUACCGCAGCCA ; C,D ? 2 'polypeptide(L)' no yes ;(MSE)AVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLK(MSE)RGQAFVIFKEVSSATNALRS (MSE)QGFPFYDKP(MSE)RIQYAKTDSDIIAK(MSE)K ; ;MAVPETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK PMRIQYAKTDSDIIAKMK ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 A n 1 4 U n 1 5 G n 1 6 G n 1 7 C n 1 8 G n 1 9 A n 1 10 A n 1 11 A n 1 12 G n 1 13 C n 1 14 C n 1 15 A n 1 16 U n 1 17 U n 1 18 U n 1 19 C n 1 20 C n 1 21 G n 1 22 C n 1 23 A n 1 24 G n 1 25 G n 1 26 C n 1 27 C n 1 28 C n 1 29 C n 1 30 A n 1 31 U n 1 32 U n 1 33 G n 1 34 C n 1 35 A n 1 36 C n 1 37 U n 1 38 C n 1 39 C n 1 40 G n 1 41 G n 1 42 G n 1 43 G n 1 44 U n 1 45 A n 1 46 U n 1 47 U n 1 48 G n 1 49 G n 1 50 C n 1 51 G n 1 52 U n 1 53 U n 1 54 A n 1 55 G n 1 56 G n 1 57 U n 1 58 G n 1 59 G n 1 60 U n 1 61 G n 1 62 G n 1 63 U n 1 64 A n 1 65 C n 1 66 G n 1 67 A n 1 68 G n 1 69 G n 1 70 U n 1 71 U n 1 72 C n 1 73 G n 1 74 A n 1 75 A n 1 76 U n 1 77 C n 1 78 C n 1 79 U n 1 80 C n 1 81 G n 1 82 U n 1 83 A n 1 84 C n 1 85 C n 1 86 G n 1 87 C n 1 88 A n 1 89 G n 1 90 C n 1 91 C n 1 92 A n 2 1 MSE n 2 2 ALA n 2 3 VAL n 2 4 PRO n 2 5 GLU n 2 6 THR n 2 7 ARG n 2 8 PRO n 2 9 ASN n 2 10 HIS n 2 11 THR n 2 12 ILE n 2 13 TYR n 2 14 ILE n 2 15 ASN n 2 16 ASN n 2 17 LEU n 2 18 ASN n 2 19 GLU n 2 20 LYS n 2 21 ILE n 2 22 LYS n 2 23 LYS n 2 24 ASP n 2 25 GLU n 2 26 LEU n 2 27 LYS n 2 28 LYS n 2 29 SER n 2 30 LEU n 2 31 HIS n 2 32 ALA n 2 33 ILE n 2 34 PHE n 2 35 SER n 2 36 ARG n 2 37 PHE n 2 38 GLY n 2 39 GLN n 2 40 ILE n 2 41 LEU n 2 42 ASP n 2 43 ILE n 2 44 LEU n 2 45 VAL n 2 46 SER n 2 47 ARG n 2 48 SER n 2 49 LEU n 2 50 LYS n 2 51 MSE n 2 52 ARG n 2 53 GLY n 2 54 GLN n 2 55 ALA n 2 56 PHE n 2 57 VAL n 2 58 ILE n 2 59 PHE n 2 60 LYS n 2 61 GLU n 2 62 VAL n 2 63 SER n 2 64 SER n 2 65 ALA n 2 66 THR n 2 67 ASN n 2 68 ALA n 2 69 LEU n 2 70 ARG n 2 71 SER n 2 72 MSE n 2 73 GLN n 2 74 GLY n 2 75 PHE n 2 76 PRO n 2 77 PHE n 2 78 TYR n 2 79 ASP n 2 80 LYS n 2 81 PRO n 2 82 MSE n 2 83 ARG n 2 84 ILE n 2 85 GLN n 2 86 TYR n 2 87 ALA n 2 88 LYS n 2 89 THR n 2 90 ASP n 2 91 SER n 2 92 ASP n 2 93 ILE n 2 94 ILE n 2 95 ALA n 2 96 LYS n 2 97 MSE n 2 98 LYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'CELL-FREE SYNTHESIS' ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? SNRPA ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP SNRPA_HUMAN P09012 2 ;MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK PMRIQYAKTDSDIIAKMK ; 1 ? 2 PDB 3CUN 3CUN 1 ;GGAUGGCGAAAGCCAUUUCCGCAGGCCCCAUUGCACUCCGGGGUAUUGGCGUUAGGUGGUGGUACGAGGUUCGAAUCCUC GUACCGCAGCCA ; ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3CUN A 6 ? 98 ? P09012 1 ? 98 ? 301 393 2 1 3CUN B 5 ? 98 ? P09012 1 ? 98 ? 400 493 3 2 3CUN C 1 ? 92 ? 3CUN 1 ? 92 ? 1 92 4 2 3CUN D 1 ? 92 ? 3CUN 101 ? 192 ? 101 192 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CUN HIS A 31 ? UNP P09012 TYR 31 'engineered mutation' 326 1 1 3CUN ARG A 36 ? UNP P09012 GLN 36 'engineered mutation' 331 2 2 3CUN HIS B 31 ? UNP P09012 TYR 31 'engineered mutation' 426 3 2 3CUN ARG B 36 ? UNP P09012 GLN 36 'engineered mutation' 431 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3CUN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_percent_sol 51.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '100 mM magenesium formate pH 7.0, 15% PEG 3000, 1 M lithium chloride, VAPOR DIFFUSION, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'magnesium formate' ? ? ? 1 2 2 'magnesium formate' ? ? ? 1 3 2 'PEG 3000' ? ? ? 1 4 2 'lithium chloride' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2005-10-06 _diffrn_detector.details 'Si (111)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9572 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 5.0.2' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 5.0.2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9572 # _reflns.entry_id 3CUN _reflns.observed_criterion_sigma_I 1.9 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30 _reflns.d_resolution_high 3.0 _reflns.number_obs 13610 _reflns.number_all ? _reflns.percent_possible_obs 80.8 _reflns.pdbx_Rmerge_I_obs 0.87 _reflns.pdbx_Rsym_value 0.87 _reflns.pdbx_netI_over_sigmaI 21.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.0 _reflns_shell.d_res_low 3.1 _reflns_shell.percent_possible_all 51.6 _reflns_shell.Rmerge_I_obs 0.501 _reflns_shell.pdbx_Rsym_value 0.501 _reflns_shell.meanI_over_sigI_obs 1.9 _reflns_shell.pdbx_redundancy 2.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1355 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CUN _refine.ls_number_reflns_obs 13610 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 185743.74 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.75 _refine.ls_d_res_high 3.00 _refine.ls_percent_reflns_obs 80.8 _refine.ls_R_factor_obs 0.252 _refine.ls_R_factor_all 0.252 _refine.ls_R_factor_R_work 0.252 _refine.ls_R_factor_R_free 0.303 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 1355 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 100.7 _refine.aniso_B[1][1] -40.72 _refine.aniso_B[2][2] 35.40 _refine.aniso_B[3][3] 5.32 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.3 _refine.solvent_model_param_bsol 25 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB entry 3CUL' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3CUN _refine_analyze.Luzzati_coordinate_error_obs 0.39 _refine_analyze.Luzzati_sigma_a_obs 0.52 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.51 _refine_analyze.Luzzati_sigma_a_free 0.53 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1407 _refine_hist.pdbx_number_atoms_nucleic_acid 3946 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 5364 _refine_hist.d_res_high 3.00 _refine_hist.d_res_low 28.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 12.4 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.00 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.93 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 3.29 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.34 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.60 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 3.00 _refine_ls_shell.d_res_low 3.19 _refine_ls_shell.number_reflns_R_work 954 _refine_ls_shell.R_factor_R_work 0.379 _refine_ls_shell.percent_reflns_obs 38.9 _refine_ls_shell.R_factor_R_free 0.41 _refine_ls_shell.R_factor_R_free_error 0.038 _refine_ls_shell.percent_reflns_R_free 10.7 _refine_ls_shell.number_reflns_R_free 114 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' 4 water_rep.param water.top 'X-RAY DIFFRACTION' 5 gtn.param gtn.top 'X-RAY DIFFRACTION' # _struct.entry_id 3CUN _struct.title 'Aminoacyl-tRNA synthetase ribozyme' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CUN _struct_keywords.pdbx_keywords 'RNA/RNA binding' _struct_keywords.text 'ARS ribozyme catalytic RNA, RNA-RNA binding COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS C 22 ? SER C 35 ? LYS A 317 SER A 330 1 ? 14 HELX_P HELX_P2 2 ARG C 36 ? GLY C 38 ? ARG A 331 GLY A 333 5 ? 3 HELX_P HELX_P3 3 GLU C 61 ? GLN C 73 ? GLU A 356 GLN A 368 1 ? 13 HELX_P HELX_P4 4 SER C 91 ? MSE C 97 ? SER A 386 MSE A 392 1 ? 7 HELX_P HELX_P5 5 LYS D 22 ? SER D 35 ? LYS B 417 SER B 430 1 ? 14 HELX_P HELX_P6 6 GLU D 61 ? GLN D 73 ? GLU B 456 GLN B 468 1 ? 13 HELX_P HELX_P7 7 SER D 91 ? LYS D 96 ? SER B 486 LYS B 491 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? C GTP 1 C G 2 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale2 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? D GTP 101 D G 102 1_555 ? ? ? ? ? ? ? 1.612 ? ? covale3 covale both ? C LYS 50 C ? ? ? 1_555 C MSE 51 N ? ? A LYS 345 A MSE 346 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale4 covale both ? C MSE 51 C ? ? ? 1_555 C ARG 52 N ? ? A MSE 346 A ARG 347 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? C SER 71 C ? ? ? 1_555 C MSE 72 N ? ? A SER 366 A MSE 367 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? C MSE 72 C ? ? ? 1_555 C GLN 73 N ? ? A MSE 367 A GLN 368 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale7 covale both ? C PRO 81 C ? ? ? 1_555 C MSE 82 N ? ? A PRO 376 A MSE 377 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale8 covale both ? C MSE 82 C ? ? ? 1_555 C ARG 83 N ? ? A MSE 377 A ARG 378 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale9 covale both ? C LYS 96 C ? ? ? 1_555 C MSE 97 N ? ? A LYS 391 A MSE 392 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? D LYS 50 C ? ? ? 1_555 D MSE 51 N ? ? B LYS 445 B MSE 446 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale11 covale both ? D MSE 51 C ? ? ? 1_555 D ARG 52 N ? ? B MSE 446 B ARG 447 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale12 covale both ? D SER 71 C ? ? ? 1_555 D MSE 72 N ? ? B SER 466 B MSE 467 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale13 covale both ? D MSE 72 C ? ? ? 1_555 D GLN 73 N ? ? B MSE 467 B GLN 468 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale14 covale both ? D PRO 81 C ? ? ? 1_555 D MSE 82 N ? ? B PRO 476 B MSE 477 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale15 covale both ? D MSE 82 C ? ? ? 1_555 D ARG 83 N ? ? B MSE 477 B ARG 478 1_555 ? ? ? ? ? ? ? 1.326 ? ? metalc1 metalc ? ? A GTP 1 O2B ? ? ? 1_555 H MG . MG ? ? C GTP 1 C MG 507 1_555 ? ? ? ? ? ? ? 1.958 ? ? metalc2 metalc ? ? A U 17 N1 ? ? ? 1_555 J K . K ? ? C U 17 C K 511 1_555 ? ? ? ? ? ? ? 2.796 ? ? metalc3 metalc ? ? B C 29 OP2 ? ? ? 1_555 N MG . MG ? ? D C 129 D MG 513 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc4 metalc ? ? B U 70 OP2 ? ? ? 1_555 L MG . MG ? ? D U 170 D MG 504 1_555 ? ? ? ? ? ? ? 2.269 ? ? metalc5 metalc ? ? B U 71 O4 ? ? ? 1_555 L MG . MG ? ? D U 171 D MG 504 1_555 ? ? ? ? ? ? ? 1.972 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A C 19 N3 ? ? C GTP 1 C C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A C 19 O2 ? ? C GTP 1 C C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A C 19 N4 ? ? C GTP 1 C C 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 17 O2 ? ? C G 2 C U 17 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 17 N3 ? ? C G 2 C U 17 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 16 N3 ? ? C A 3 C U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 16 O4 ? ? C A 3 C U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 15 N1 ? ? C U 4 C A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 15 N6 ? ? C U 4 C A 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 14 N3 ? ? C G 5 C C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 14 O2 ? ? C G 5 C C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 14 N4 ? ? C G 5 C C 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 13 N3 ? ? C G 6 C C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 13 O2 ? ? C G 6 C C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 13 N4 ? ? C G 6 C C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 12 N1 ? ? C C 7 C G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 12 O6 ? ? C C 7 C G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 12 N2 ? ? C C 7 C G 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 17 O2 ? ? ? 1_555 A C 19 N4 ? ? C U 17 C C 19 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog20 hydrog ? ? A C 20 N3 ? ? ? 1_555 A G 51 N1 ? ? C C 20 C G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A C 20 N4 ? ? ? 1_555 A G 51 O6 ? ? C C 20 C G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 20 O2 ? ? ? 1_555 A G 51 N2 ? ? C C 20 C G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 21 N1 ? ? ? 1_555 A C 50 N3 ? ? C G 21 C C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 21 N2 ? ? ? 1_555 A C 50 O2 ? ? C G 21 C C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 21 O6 ? ? ? 1_555 A C 50 N4 ? ? C G 21 C C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 21 N2 ? ? ? 1_555 A A 54 N3 ? ? C G 21 C A 54 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog27 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 49 N1 ? ? C C 22 C G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 49 O6 ? ? C C 22 C G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 49 N2 ? ? C C 22 C G 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A A 23 N1 ? ? ? 1_555 A G 48 N1 ? ? C A 23 C G 48 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog31 hydrog ? ? A A 23 N6 ? ? ? 1_555 A G 48 O6 ? ? C A 23 C G 48 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog32 hydrog ? ? A G 24 N1 ? ? ? 1_555 A U 47 O4 ? ? C G 24 C U 47 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog33 hydrog ? ? A G 25 N1 ? ? ? 1_555 A U 44 O2 ? ? C G 25 C U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog34 hydrog ? ? A G 25 O6 ? ? ? 1_555 A U 44 N3 ? ? C G 25 C U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog35 hydrog ? ? A C 26 N3 ? ? ? 1_555 A G 43 N1 ? ? C C 26 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 26 N4 ? ? ? 1_555 A G 43 O6 ? ? C C 26 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 26 O2 ? ? ? 1_555 A G 43 N2 ? ? C C 26 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 27 N3 ? ? ? 1_555 A G 42 N1 ? ? C C 27 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 27 N4 ? ? ? 1_555 A G 42 O6 ? ? C C 27 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 27 O2 ? ? ? 1_555 A G 42 N2 ? ? C C 27 C G 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 28 N3 ? ? ? 1_555 A G 41 N1 ? ? C C 28 C G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 28 N4 ? ? ? 1_555 A G 41 O6 ? ? C C 28 C G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 28 O2 ? ? ? 1_555 A G 41 N2 ? ? C C 28 C G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 29 N3 ? ? ? 1_555 A G 40 N1 ? ? C C 29 C G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 29 N4 ? ? ? 1_555 A G 40 O6 ? ? C C 29 C G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 29 O2 ? ? ? 1_555 A G 40 N2 ? ? C C 29 C G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 55 N1 ? ? ? 1_555 A C 91 N3 ? ? C G 55 C C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A G 55 N2 ? ? ? 1_555 A C 91 O2 ? ? C G 55 C C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 55 O6 ? ? ? 1_555 A C 91 N4 ? ? C G 55 C C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 56 N1 ? ? ? 1_555 A C 90 N3 ? ? C G 56 C C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 56 N2 ? ? ? 1_555 A C 90 O2 ? ? C G 56 C C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 56 O6 ? ? ? 1_555 A C 90 N4 ? ? C G 56 C C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 58 N1 ? ? ? 1_555 A A 88 N1 ? ? C G 58 C A 88 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog54 hydrog ? ? A G 58 O6 ? ? ? 1_555 A A 88 N6 ? ? C G 58 C A 88 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog55 hydrog ? ? A G 59 N1 ? ? ? 1_555 A C 87 N3 ? ? C G 59 C C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 59 N2 ? ? ? 1_555 A C 87 O2 ? ? C G 59 C C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 59 O6 ? ? ? 1_555 A C 87 N4 ? ? C G 59 C C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 61 O6 ? ? ? 1_555 A C 85 N4 ? ? C G 61 C C 85 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog59 hydrog ? ? A G 62 N1 ? ? ? 1_555 A C 84 N3 ? ? C G 62 C C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 62 N2 ? ? ? 1_555 A C 84 O2 ? ? C G 62 C C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 62 O6 ? ? ? 1_555 A C 84 N4 ? ? C G 62 C C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A U 63 N3 ? ? ? 1_555 A A 83 N1 ? ? C U 63 C A 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A U 63 O4 ? ? ? 1_555 A A 83 N6 ? ? C U 63 C A 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A A 64 N1 ? ? ? 1_555 A U 82 N3 ? ? C A 64 C U 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 64 N6 ? ? ? 1_555 A U 82 O4 ? ? C A 64 C U 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 65 N3 ? ? ? 1_555 A G 81 N1 ? ? C C 65 C G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 65 N4 ? ? ? 1_555 A G 81 O6 ? ? C C 65 C G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 65 O2 ? ? ? 1_555 A G 81 N2 ? ? C C 65 C G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 66 N1 ? ? ? 1_555 A C 80 N3 ? ? C G 66 C C 80 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog70 hydrog ? ? A A 67 N1 ? ? ? 1_555 A U 79 N3 ? ? C A 67 C U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A A 67 N6 ? ? ? 1_555 A U 79 O4 ? ? C A 67 C U 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 68 N1 ? ? ? 1_555 A C 78 N3 ? ? C G 68 C C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 68 N2 ? ? ? 1_555 A C 78 O2 ? ? C G 68 C C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 68 O6 ? ? ? 1_555 A C 78 N4 ? ? C G 68 C C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 69 N1 ? ? ? 1_555 A C 77 N3 ? ? C G 69 C C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 69 N2 ? ? ? 1_555 A C 77 O2 ? ? C G 69 C C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 69 O6 ? ? ? 1_555 A C 77 N4 ? ? C G 69 C C 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A U 70 N3 ? ? ? 1_555 A U 76 O4 ? ? C U 70 C U 76 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog79 hydrog ? ? A U 70 O2 ? ? ? 1_555 A U 76 N3 ? ? C U 70 C U 76 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog80 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B C 19 N3 ? ? D GTP 101 D C 119 1_555 ? ? ? ? ? ? 'GTP-C PAIR' ? ? ? hydrog81 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B C 20 N3 ? ? D GTP 101 D C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? B GTP 1 N2 ? ? ? 1_555 B C 20 O2 ? ? D GTP 101 D C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B C 20 N4 ? ? D GTP 101 D C 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 17 O2 ? ? D G 102 D U 117 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog85 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 17 N3 ? ? D G 102 D U 117 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog86 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 16 N3 ? ? D A 103 D U 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 16 O4 ? ? D A 103 D U 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B U 4 N3 ? ? ? 1_555 B A 15 N1 ? ? D U 104 D A 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B U 4 O4 ? ? ? 1_555 B A 15 N6 ? ? D U 104 D A 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B G 5 N1 ? ? ? 1_555 B C 14 N3 ? ? D G 105 D C 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 5 N2 ? ? ? 1_555 B C 14 O2 ? ? D G 105 D C 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 5 O6 ? ? ? 1_555 B C 14 N4 ? ? D G 105 D C 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 13 N3 ? ? D G 106 D C 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 6 N2 ? ? ? 1_555 B C 13 O2 ? ? D G 106 D C 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B G 6 O6 ? ? ? 1_555 B C 13 N4 ? ? D G 106 D C 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B C 7 N3 ? ? ? 1_555 B G 12 N1 ? ? D C 107 D G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B C 7 N4 ? ? ? 1_555 B G 12 O6 ? ? D C 107 D G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B C 7 O2 ? ? ? 1_555 B G 12 N2 ? ? D C 107 D G 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B G 8 N2 ? ? ? 1_555 B A 11 N7 ? ? D G 108 D A 111 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog100 hydrog ? ? B C 20 N3 ? ? ? 1_555 B G 51 N1 ? ? D C 120 D G 151 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B C 20 N4 ? ? ? 1_555 B G 51 O6 ? ? D C 120 D G 151 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B C 20 O2 ? ? ? 1_555 B G 51 N2 ? ? D C 120 D G 151 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B G 21 N2 ? ? ? 1_555 B C 50 O2 ? ? D G 121 D C 150 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog104 hydrog ? ? B C 22 N4 ? ? ? 1_555 B G 49 O6 ? ? D C 122 D G 149 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog105 hydrog ? ? B G 24 N1 ? ? ? 1_555 B U 47 O4 ? ? D G 124 D U 147 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog106 hydrog ? ? B G 25 N1 ? ? ? 1_555 B U 44 O2 ? ? D G 125 D U 144 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog107 hydrog ? ? B G 25 O6 ? ? ? 1_555 B U 44 N3 ? ? D G 125 D U 144 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog108 hydrog ? ? B C 26 N4 ? ? ? 1_555 B G 43 O6 ? ? D C 126 D G 143 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog109 hydrog ? ? B C 27 N3 ? ? ? 1_555 B G 42 N1 ? ? D C 127 D G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B C 27 N4 ? ? ? 1_555 B G 42 O6 ? ? D C 127 D G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B C 27 O2 ? ? ? 1_555 B G 42 N2 ? ? D C 127 D G 142 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B C 28 N3 ? ? ? 1_555 B G 41 N1 ? ? D C 128 D G 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B C 28 N4 ? ? ? 1_555 B G 41 O6 ? ? D C 128 D G 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B C 28 O2 ? ? ? 1_555 B G 41 N2 ? ? D C 128 D G 141 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? B C 29 O2 ? ? ? 1_555 B G 40 N1 ? ? D C 129 D G 140 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog116 hydrog ? ? B G 55 N2 ? ? ? 1_555 B C 91 O2 ? ? D G 155 D C 191 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog117 hydrog ? ? B G 56 N1 ? ? ? 1_555 B C 91 O2 ? ? D G 156 D C 191 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog118 hydrog ? ? B G 58 N2 ? ? ? 1_555 B G 59 O6 ? ? D G 158 D G 159 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog119 hydrog ? ? B G 58 N2 ? ? ? 1_555 B A 88 N1 ? ? D G 158 D A 188 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog120 hydrog ? ? B G 59 N1 ? ? ? 1_555 B C 87 O2 ? ? D G 159 D C 187 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog121 hydrog ? ? B U 60 O2 ? ? ? 1_555 B G 86 N2 ? ? D U 160 D G 186 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog122 hydrog ? ? B G 61 N1 ? ? ? 1_555 B C 85 N3 ? ? D G 161 D C 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B G 61 N2 ? ? ? 1_555 B C 85 O2 ? ? D G 161 D C 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B G 61 O6 ? ? ? 1_555 B C 85 N4 ? ? D G 161 D C 185 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B G 62 N1 ? ? ? 1_555 B C 84 N3 ? ? D G 162 D C 184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B G 62 N2 ? ? ? 1_555 B C 84 O2 ? ? D G 162 D C 184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B G 62 O6 ? ? ? 1_555 B C 84 N4 ? ? D G 162 D C 184 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B U 63 N3 ? ? ? 1_555 B A 83 N1 ? ? D U 163 D A 183 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B U 63 O4 ? ? ? 1_555 B A 83 N6 ? ? D U 163 D A 183 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B A 64 N1 ? ? ? 1_555 B U 82 N3 ? ? D A 164 D U 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B A 64 N6 ? ? ? 1_555 B U 82 O4 ? ? D A 164 D U 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B C 65 N3 ? ? ? 1_555 B G 81 N1 ? ? D C 165 D G 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B C 65 N4 ? ? ? 1_555 B G 81 O6 ? ? D C 165 D G 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B C 65 O2 ? ? ? 1_555 B G 81 N2 ? ? D C 165 D G 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B G 66 N1 ? ? ? 1_555 B C 80 N3 ? ? D G 166 D C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B G 66 N2 ? ? ? 1_555 B C 80 O2 ? ? D G 166 D C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B G 66 O6 ? ? ? 1_555 B C 80 N4 ? ? D G 166 D C 180 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B A 67 N1 ? ? ? 1_555 B U 79 N3 ? ? D A 167 D U 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B A 67 N6 ? ? ? 1_555 B U 79 O4 ? ? D A 167 D U 179 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B G 68 N1 ? ? ? 1_555 B C 78 N3 ? ? D G 168 D C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? B G 68 N2 ? ? ? 1_555 B C 78 O2 ? ? D G 168 D C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B G 68 O6 ? ? ? 1_555 B C 78 N4 ? ? D G 168 D C 178 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? B G 69 N1 ? ? ? 1_555 B C 77 N3 ? ? D G 169 D C 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? B G 69 N2 ? ? ? 1_555 B C 77 O2 ? ? D G 169 D C 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? B G 69 O6 ? ? ? 1_555 B C 77 N4 ? ? D G 169 D C 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? B U 70 N3 ? ? ? 1_555 B U 76 O4 ? ? D U 170 D U 176 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog147 hydrog ? ? B U 70 O2 ? ? ? 1_555 B U 76 N3 ? ? D U 170 D U 176 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE C 40 ? VAL C 45 ? ILE A 335 VAL A 340 A 2 ALA C 55 ? PHE C 59 ? ALA A 350 PHE A 354 A 3 THR C 11 ? ASN C 15 ? THR A 306 ASN A 310 A 4 ARG C 83 ? TYR C 86 ? ARG A 378 TYR A 381 B 1 ILE D 40 ? LEU D 44 ? ILE B 435 LEU B 439 B 2 GLN D 54 ? PHE D 59 ? GLN B 449 PHE B 454 B 3 THR D 11 ? ASN D 15 ? THR B 406 ASN B 410 B 4 ARG D 83 ? TYR D 86 ? ARG B 478 TYR B 481 C 1 PRO D 76 ? PHE D 77 ? PRO B 471 PHE B 472 C 2 LYS D 80 ? PRO D 81 ? LYS B 475 PRO B 476 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP C 42 ? N ASP A 337 O ILE C 58 ? O ILE A 353 A 2 3 O ALA C 55 ? O ALA A 350 N ILE C 14 ? N ILE A 309 A 3 4 N TYR C 13 ? N TYR A 308 O GLN C 85 ? O GLN A 380 B 1 2 N ASP D 42 ? N ASP B 437 O ILE D 58 ? O ILE B 453 B 2 3 O ALA D 55 ? O ALA B 450 N ILE D 14 ? N ILE B 409 B 3 4 N TYR D 13 ? N TYR B 408 O GLN D 85 ? O GLN B 480 C 1 2 N PHE D 77 ? N PHE B 472 O LYS D 80 ? O LYS B 475 # _struct_site.id AC4 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id CO _struct_site.pdbx_auth_seq_id 514 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE CO B 514' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC4 2 HIS D 31 ? HIS B 426 . ? 1_555 ? 2 AC4 2 ILE D 40 ? ILE B 435 . ? 1_555 ? # _database_PDB_matrix.entry_id 3CUN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3CUN _atom_sites.fract_transf_matrix[1][1] 0.005226 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000320 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020800 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011053 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO K MG N O P SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 1 1 GTP GTP C . n A 1 2 G 2 2 2 G G C . n A 1 3 A 3 3 3 A A C . n A 1 4 U 4 4 4 U U C . n A 1 5 G 5 5 5 G G C . n A 1 6 G 6 6 6 G G C . n A 1 7 C 7 7 7 C C C . n A 1 8 G 8 8 8 G G C . n A 1 9 A 9 9 9 A A C . n A 1 10 A 10 10 10 A A C . n A 1 11 A 11 11 11 A A C . n A 1 12 G 12 12 12 G G C . n A 1 13 C 13 13 13 C C C . n A 1 14 C 14 14 14 C C C . n A 1 15 A 15 15 15 A A C . n A 1 16 U 16 16 16 U U C . n A 1 17 U 17 17 17 U U C . n A 1 18 U 18 18 18 U U C . n A 1 19 C 19 19 19 C C C . n A 1 20 C 20 20 20 C C C . n A 1 21 G 21 21 21 G G C . n A 1 22 C 22 22 22 C C C . n A 1 23 A 23 23 23 A A C . n A 1 24 G 24 24 24 G G C . n A 1 25 G 25 25 25 G G C . n A 1 26 C 26 26 26 C C C . n A 1 27 C 27 27 27 C C C . n A 1 28 C 28 28 28 C C C . n A 1 29 C 29 29 29 C C C . n A 1 30 A 30 30 30 A A C . n A 1 31 U 31 31 31 U U C . n A 1 32 U 32 32 32 U U C . n A 1 33 G 33 33 33 G G C . n A 1 34 C 34 34 34 C C C . n A 1 35 A 35 35 35 A A C . n A 1 36 C 36 36 36 C C C . n A 1 37 U 37 37 37 U U C . n A 1 38 C 38 38 38 C C C . n A 1 39 C 39 39 39 C C C . n A 1 40 G 40 40 40 G G C . n A 1 41 G 41 41 41 G G C . n A 1 42 G 42 42 42 G G C . n A 1 43 G 43 43 43 G G C . n A 1 44 U 44 44 44 U U C . n A 1 45 A 45 45 45 A A C . n A 1 46 U 46 46 46 U U C . n A 1 47 U 47 47 47 U U C . n A 1 48 G 48 48 48 G G C . n A 1 49 G 49 49 49 G G C . n A 1 50 C 50 50 50 C C C . n A 1 51 G 51 51 51 G G C . n A 1 52 U 52 52 52 U U C . n A 1 53 U 53 53 53 U U C . n A 1 54 A 54 54 54 A A C . n A 1 55 G 55 55 55 G G C . n A 1 56 G 56 56 56 G G C . n A 1 57 U 57 57 57 U U C . n A 1 58 G 58 58 58 G G C . n A 1 59 G 59 59 59 G G C . n A 1 60 U 60 60 60 U U C . n A 1 61 G 61 61 61 G G C . n A 1 62 G 62 62 62 G G C . n A 1 63 U 63 63 63 U U C . n A 1 64 A 64 64 64 A A C . n A 1 65 C 65 65 65 C C C . n A 1 66 G 66 66 66 G G C . n A 1 67 A 67 67 67 A A C . n A 1 68 G 68 68 68 G G C . n A 1 69 G 69 69 69 G G C . n A 1 70 U 70 70 70 U U C . n A 1 71 U 71 71 71 U U C . n A 1 72 C 72 72 72 C C C . n A 1 73 G 73 73 73 G G C . n A 1 74 A 74 74 74 A A C . n A 1 75 A 75 75 75 A A C . n A 1 76 U 76 76 76 U U C . n A 1 77 C 77 77 77 C C C . n A 1 78 C 78 78 78 C C C . n A 1 79 U 79 79 79 U U C . n A 1 80 C 80 80 80 C C C . n A 1 81 G 81 81 81 G G C . n A 1 82 U 82 82 82 U U C . n A 1 83 A 83 83 83 A A C . n A 1 84 C 84 84 84 C C C . n A 1 85 C 85 85 85 C C C . n A 1 86 G 86 86 86 G G C . n A 1 87 C 87 87 87 C C C . n A 1 88 A 88 88 88 A A C . n A 1 89 G 89 89 89 G G C . n A 1 90 C 90 90 90 C C C . n A 1 91 C 91 91 91 C C C . n A 1 92 A 92 92 92 A A C . n B 1 1 GTP 1 101 101 GTP GTP D . n B 1 2 G 2 102 102 G G D . n B 1 3 A 3 103 103 A A D . n B 1 4 U 4 104 104 U U D . n B 1 5 G 5 105 105 G G D . n B 1 6 G 6 106 106 G G D . n B 1 7 C 7 107 107 C C D . n B 1 8 G 8 108 108 G G D . n B 1 9 A 9 109 109 A A D . n B 1 10 A 10 110 110 A A D . n B 1 11 A 11 111 111 A A D . n B 1 12 G 12 112 112 G G D . n B 1 13 C 13 113 113 C C D . n B 1 14 C 14 114 114 C C D . n B 1 15 A 15 115 115 A A D . n B 1 16 U 16 116 116 U U D . n B 1 17 U 17 117 117 U U D . n B 1 18 U 18 118 118 U U D . n B 1 19 C 19 119 119 C C D . n B 1 20 C 20 120 120 C C D . n B 1 21 G 21 121 121 G G D . n B 1 22 C 22 122 122 C C D . n B 1 23 A 23 123 123 A A D . n B 1 24 G 24 124 124 G G D . n B 1 25 G 25 125 125 G G D . n B 1 26 C 26 126 126 C C D . n B 1 27 C 27 127 127 C C D . n B 1 28 C 28 128 128 C C D . n B 1 29 C 29 129 129 C C D . n B 1 30 A 30 130 130 A A D . n B 1 31 U 31 131 131 U U D . n B 1 32 U 32 132 132 U U D . n B 1 33 G 33 133 133 G G D . n B 1 34 C 34 134 134 C C D . n B 1 35 A 35 135 135 A A D . n B 1 36 C 36 136 136 C C D . n B 1 37 U 37 137 137 U U D . n B 1 38 C 38 138 138 C C D . n B 1 39 C 39 139 139 C C D . n B 1 40 G 40 140 140 G G D . n B 1 41 G 41 141 141 G G D . n B 1 42 G 42 142 142 G G D . n B 1 43 G 43 143 143 G G D . n B 1 44 U 44 144 144 U U D . n B 1 45 A 45 145 145 A A D . n B 1 46 U 46 146 146 U U D . n B 1 47 U 47 147 147 U U D . n B 1 48 G 48 148 148 G G D . n B 1 49 G 49 149 149 G G D . n B 1 50 C 50 150 150 C C D . n B 1 51 G 51 151 151 G G D . n B 1 52 U 52 152 152 U U D . n B 1 53 U 53 153 153 U U D . n B 1 54 A 54 154 154 A A D . n B 1 55 G 55 155 155 G G D . n B 1 56 G 56 156 156 G G D . n B 1 57 U 57 157 157 U U D . n B 1 58 G 58 158 158 G G D . n B 1 59 G 59 159 159 G G D . n B 1 60 U 60 160 160 U U D . n B 1 61 G 61 161 161 G G D . n B 1 62 G 62 162 162 G G D . n B 1 63 U 63 163 163 U U D . n B 1 64 A 64 164 164 A A D . n B 1 65 C 65 165 165 C C D . n B 1 66 G 66 166 166 G G D . n B 1 67 A 67 167 167 A A D . n B 1 68 G 68 168 168 G G D . n B 1 69 G 69 169 169 G G D . n B 1 70 U 70 170 170 U U D . n B 1 71 U 71 171 171 U U D . n B 1 72 C 72 172 172 C C D . n B 1 73 G 73 173 173 G G D . n B 1 74 A 74 174 174 A A D . n B 1 75 A 75 175 175 A A D . n B 1 76 U 76 176 176 U U D . n B 1 77 C 77 177 177 C C D . n B 1 78 C 78 178 178 C C D . n B 1 79 U 79 179 179 U U D . n B 1 80 C 80 180 180 C C D . n B 1 81 G 81 181 181 G G D . n B 1 82 U 82 182 182 U U D . n B 1 83 A 83 183 183 A A D . n B 1 84 C 84 184 184 C C D . n B 1 85 C 85 185 185 C C D . n B 1 86 G 86 186 186 G G D . n B 1 87 C 87 187 187 C C D . n B 1 88 A 88 188 188 A A D . n B 1 89 G 89 189 189 G G D . n B 1 90 C 90 190 190 C C D . n B 1 91 C 91 191 191 C C D . n B 1 92 A 92 192 192 A A D . n C 2 1 MSE 1 296 ? ? ? A . n C 2 2 ALA 2 297 ? ? ? A . n C 2 3 VAL 3 298 ? ? ? A . n C 2 4 PRO 4 299 ? ? ? A . n C 2 5 GLU 5 300 ? ? ? A . n C 2 6 THR 6 301 ? ? ? A . n C 2 7 ARG 7 302 302 ARG ARG A . n C 2 8 PRO 8 303 303 PRO PRO A . n C 2 9 ASN 9 304 304 ASN ASN A . n C 2 10 HIS 10 305 305 HIS HIS A . n C 2 11 THR 11 306 306 THR THR A . n C 2 12 ILE 12 307 307 ILE ILE A . n C 2 13 TYR 13 308 308 TYR TYR A . n C 2 14 ILE 14 309 309 ILE ILE A . n C 2 15 ASN 15 310 310 ASN ASN A . n C 2 16 ASN 16 311 311 ASN ASN A . n C 2 17 LEU 17 312 312 LEU LEU A . n C 2 18 ASN 18 313 313 ASN ASN A . n C 2 19 GLU 19 314 314 GLU GLU A . n C 2 20 LYS 20 315 315 LYS LYS A . n C 2 21 ILE 21 316 316 ILE ILE A . n C 2 22 LYS 22 317 317 LYS LYS A . n C 2 23 LYS 23 318 318 LYS LYS A . n C 2 24 ASP 24 319 319 ASP ASP A . n C 2 25 GLU 25 320 320 GLU GLU A . n C 2 26 LEU 26 321 321 LEU LEU A . n C 2 27 LYS 27 322 322 LYS LYS A . n C 2 28 LYS 28 323 323 LYS LYS A . n C 2 29 SER 29 324 324 SER SER A . n C 2 30 LEU 30 325 325 LEU LEU A . n C 2 31 HIS 31 326 326 HIS HIS A . n C 2 32 ALA 32 327 327 ALA ALA A . n C 2 33 ILE 33 328 328 ILE ILE A . n C 2 34 PHE 34 329 329 PHE PHE A . n C 2 35 SER 35 330 330 SER SER A . n C 2 36 ARG 36 331 331 ARG ARG A . n C 2 37 PHE 37 332 332 PHE PHE A . n C 2 38 GLY 38 333 333 GLY GLY A . n C 2 39 GLN 39 334 334 GLN GLN A . n C 2 40 ILE 40 335 335 ILE ILE A . n C 2 41 LEU 41 336 336 LEU LEU A . n C 2 42 ASP 42 337 337 ASP ASP A . n C 2 43 ILE 43 338 338 ILE ILE A . n C 2 44 LEU 44 339 339 LEU LEU A . n C 2 45 VAL 45 340 340 VAL VAL A . n C 2 46 SER 46 341 341 SER SER A . n C 2 47 ARG 47 342 342 ARG ARG A . n C 2 48 SER 48 343 343 SER SER A . n C 2 49 LEU 49 344 344 LEU LEU A . n C 2 50 LYS 50 345 345 LYS LYS A . n C 2 51 MSE 51 346 346 MSE MSE A . n C 2 52 ARG 52 347 347 ARG ARG A . n C 2 53 GLY 53 348 348 GLY GLY A . n C 2 54 GLN 54 349 349 GLN GLN A . n C 2 55 ALA 55 350 350 ALA ALA A . n C 2 56 PHE 56 351 351 PHE PHE A . n C 2 57 VAL 57 352 352 VAL VAL A . n C 2 58 ILE 58 353 353 ILE ILE A . n C 2 59 PHE 59 354 354 PHE PHE A . n C 2 60 LYS 60 355 355 LYS LYS A . n C 2 61 GLU 61 356 356 GLU GLU A . n C 2 62 VAL 62 357 357 VAL VAL A . n C 2 63 SER 63 358 358 SER SER A . n C 2 64 SER 64 359 359 SER SER A . n C 2 65 ALA 65 360 360 ALA ALA A . n C 2 66 THR 66 361 361 THR THR A . n C 2 67 ASN 67 362 362 ASN ASN A . n C 2 68 ALA 68 363 363 ALA ALA A . n C 2 69 LEU 69 364 364 LEU LEU A . n C 2 70 ARG 70 365 365 ARG ARG A . n C 2 71 SER 71 366 366 SER SER A . n C 2 72 MSE 72 367 367 MSE MSE A . n C 2 73 GLN 73 368 368 GLN GLN A . n C 2 74 GLY 74 369 369 GLY GLY A . n C 2 75 PHE 75 370 370 PHE PHE A . n C 2 76 PRO 76 371 371 PRO PRO A . n C 2 77 PHE 77 372 372 PHE PHE A . n C 2 78 TYR 78 373 373 TYR TYR A . n C 2 79 ASP 79 374 374 ASP ASP A . n C 2 80 LYS 80 375 375 LYS LYS A . n C 2 81 PRO 81 376 376 PRO PRO A . n C 2 82 MSE 82 377 377 MSE MSE A . n C 2 83 ARG 83 378 378 ARG ARG A . n C 2 84 ILE 84 379 379 ILE ILE A . n C 2 85 GLN 85 380 380 GLN GLN A . n C 2 86 TYR 86 381 381 TYR TYR A . n C 2 87 ALA 87 382 382 ALA ALA A . n C 2 88 LYS 88 383 383 LYS LYS A . n C 2 89 THR 89 384 384 THR THR A . n C 2 90 ASP 90 385 385 ASP ASP A . n C 2 91 SER 91 386 386 SER SER A . n C 2 92 ASP 92 387 387 ASP ASP A . n C 2 93 ILE 93 388 388 ILE ILE A . n C 2 94 ILE 94 389 389 ILE ILE A . n C 2 95 ALA 95 390 390 ALA ALA A . n C 2 96 LYS 96 391 391 LYS LYS A . n C 2 97 MSE 97 392 392 MSE MSE A . n C 2 98 LYS 98 393 ? ? ? A . n D 2 1 MSE 1 396 ? ? ? B . n D 2 2 ALA 2 397 ? ? ? B . n D 2 3 VAL 3 398 ? ? ? B . n D 2 4 PRO 4 399 ? ? ? B . n D 2 5 GLU 5 400 ? ? ? B . n D 2 6 THR 6 401 401 THR THR B . n D 2 7 ARG 7 402 402 ARG ARG B . n D 2 8 PRO 8 403 403 PRO PRO B . n D 2 9 ASN 9 404 404 ASN ASN B . n D 2 10 HIS 10 405 405 HIS HIS B . n D 2 11 THR 11 406 406 THR THR B . n D 2 12 ILE 12 407 407 ILE ILE B . n D 2 13 TYR 13 408 408 TYR TYR B . n D 2 14 ILE 14 409 409 ILE ILE B . n D 2 15 ASN 15 410 410 ASN ASN B . n D 2 16 ASN 16 411 411 ASN ASN B . n D 2 17 LEU 17 412 412 LEU LEU B . n D 2 18 ASN 18 413 413 ASN ASN B . n D 2 19 GLU 19 414 414 GLU GLU B . n D 2 20 LYS 20 415 415 LYS LYS B . n D 2 21 ILE 21 416 416 ILE ILE B . n D 2 22 LYS 22 417 417 LYS LYS B . n D 2 23 LYS 23 418 418 LYS LYS B . n D 2 24 ASP 24 419 419 ASP ASP B . n D 2 25 GLU 25 420 420 GLU GLU B . n D 2 26 LEU 26 421 421 LEU LEU B . n D 2 27 LYS 27 422 422 LYS LYS B . n D 2 28 LYS 28 423 423 LYS LYS B . n D 2 29 SER 29 424 424 SER SER B . n D 2 30 LEU 30 425 425 LEU LEU B . n D 2 31 HIS 31 426 426 HIS HIS B . n D 2 32 ALA 32 427 427 ALA ALA B . n D 2 33 ILE 33 428 428 ILE ILE B . n D 2 34 PHE 34 429 429 PHE PHE B . n D 2 35 SER 35 430 430 SER SER B . n D 2 36 ARG 36 431 431 ARG ARG B . n D 2 37 PHE 37 432 432 PHE PHE B . n D 2 38 GLY 38 433 433 GLY GLY B . n D 2 39 GLN 39 434 434 GLN GLN B . n D 2 40 ILE 40 435 435 ILE ILE B . n D 2 41 LEU 41 436 436 LEU LEU B . n D 2 42 ASP 42 437 437 ASP ASP B . n D 2 43 ILE 43 438 438 ILE ILE B . n D 2 44 LEU 44 439 439 LEU LEU B . n D 2 45 VAL 45 440 440 VAL VAL B . n D 2 46 SER 46 441 441 SER SER B . n D 2 47 ARG 47 442 442 ARG ARG B . n D 2 48 SER 48 443 443 SER SER B . n D 2 49 LEU 49 444 444 LEU LEU B . n D 2 50 LYS 50 445 445 LYS LYS B . n D 2 51 MSE 51 446 446 MSE MSE B . n D 2 52 ARG 52 447 447 ARG ARG B . n D 2 53 GLY 53 448 448 GLY GLY B . n D 2 54 GLN 54 449 449 GLN GLN B . n D 2 55 ALA 55 450 450 ALA ALA B . n D 2 56 PHE 56 451 451 PHE PHE B . n D 2 57 VAL 57 452 452 VAL VAL B . n D 2 58 ILE 58 453 453 ILE ILE B . n D 2 59 PHE 59 454 454 PHE PHE B . n D 2 60 LYS 60 455 455 LYS LYS B . n D 2 61 GLU 61 456 456 GLU GLU B . n D 2 62 VAL 62 457 457 VAL VAL B . n D 2 63 SER 63 458 458 SER SER B . n D 2 64 SER 64 459 459 SER SER B . n D 2 65 ALA 65 460 460 ALA ALA B . n D 2 66 THR 66 461 461 THR THR B . n D 2 67 ASN 67 462 462 ASN ASN B . n D 2 68 ALA 68 463 463 ALA ALA B . n D 2 69 LEU 69 464 464 LEU LEU B . n D 2 70 ARG 70 465 465 ARG ARG B . n D 2 71 SER 71 466 466 SER SER B . n D 2 72 MSE 72 467 467 MSE MSE B . n D 2 73 GLN 73 468 468 GLN GLN B . n D 2 74 GLY 74 469 469 GLY GLY B . n D 2 75 PHE 75 470 470 PHE PHE B . n D 2 76 PRO 76 471 471 PRO PRO B . n D 2 77 PHE 77 472 472 PHE PHE B . n D 2 78 TYR 78 473 473 TYR TYR B . n D 2 79 ASP 79 474 474 ASP ASP B . n D 2 80 LYS 80 475 475 LYS LYS B . n D 2 81 PRO 81 476 476 PRO PRO B . n D 2 82 MSE 82 477 477 MSE MSE B . n D 2 83 ARG 83 478 478 ARG ARG B . n D 2 84 ILE 84 479 479 ILE ILE B . n D 2 85 GLN 85 480 480 GLN GLN B . n D 2 86 TYR 86 481 481 TYR TYR B . n D 2 87 ALA 87 482 482 ALA ALA B . n D 2 88 LYS 88 483 483 LYS LYS B . n D 2 89 THR 89 484 484 THR THR B . n D 2 90 ASP 90 485 485 ASP ASP B . n D 2 91 SER 91 486 486 SER SER B . n D 2 92 ASP 92 487 487 ASP ASP B . n D 2 93 ILE 93 488 488 ILE ILE B . n D 2 94 ILE 94 489 489 ILE ILE B . n D 2 95 ALA 95 490 490 ALA ALA B . n D 2 96 LYS 96 491 491 LYS LYS B . n D 2 97 MSE 97 492 ? ? ? B . n D 2 98 LYS 98 493 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG 1 501 501 MG MG C . F 3 MG 1 503 503 MG MG C . G 3 MG 1 506 506 MG MG C . H 3 MG 1 507 507 MG MG C . I 3 MG 1 510 510 MG MG C . J 4 K 1 511 511 K K C . K 3 MG 1 502 502 MG MG D . L 3 MG 1 504 504 MG MG D . M 3 MG 1 512 512 MG MG D . N 3 MG 1 513 513 MG MG D . O 5 CO 1 514 514 CO CO B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GTP 1 C GTP 1 ? G "GUANOSINE-5'-TRIPHOSPHATE" 2 B GTP 1 D GTP 101 ? G "GUANOSINE-5'-TRIPHOSPHATE" 3 C MSE 51 A MSE 346 ? MET SELENOMETHIONINE 4 C MSE 72 A MSE 367 ? MET SELENOMETHIONINE 5 C MSE 82 A MSE 377 ? MET SELENOMETHIONINE 6 C MSE 97 A MSE 392 ? MET SELENOMETHIONINE 7 D MSE 51 B MSE 446 ? MET SELENOMETHIONINE 8 D MSE 72 B MSE 467 ? MET SELENOMETHIONINE 9 D MSE 82 B MSE 477 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,F,G,H,I,J 2 1 B,D,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id OP2 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id B _pdbx_struct_conn_angle.ptnr1_label_comp_id U _pdbx_struct_conn_angle.ptnr1_label_seq_id 70 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id D _pdbx_struct_conn_angle.ptnr1_auth_comp_id U _pdbx_struct_conn_angle.ptnr1_auth_seq_id 170 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id MG _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id L _pdbx_struct_conn_angle.ptnr2_label_comp_id MG _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id D _pdbx_struct_conn_angle.ptnr2_auth_comp_id MG _pdbx_struct_conn_angle.ptnr2_auth_seq_id 504 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id O4 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id B _pdbx_struct_conn_angle.ptnr3_label_comp_id U _pdbx_struct_conn_angle.ptnr3_label_seq_id 71 _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id D _pdbx_struct_conn_angle.ptnr3_auth_comp_id U _pdbx_struct_conn_angle.ptnr3_auth_seq_id 171 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 96.8 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-06-24 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 5 'Structure model' 1 4 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_ref_seq_dif 4 3 'Structure model' struct_site 5 4 'Structure model' chem_comp_atom 6 4 'Structure model' chem_comp_bond 7 4 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_conn.conn_type_id' 4 3 'Structure model' '_struct_conn.id' 5 3 'Structure model' '_struct_conn.pdbx_dist_value' 6 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 3 'Structure model' '_struct_ref_seq_dif.details' 22 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 23 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 24 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 25 5 'Structure model' '_chem_comp_atom.atom_id' 26 5 'Structure model' '_chem_comp_bond.atom_id_2' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" C GTP 1 ? ? "O3'" C GTP 1 ? ? P C G 2 ? ? 99.15 119.70 -20.55 1.20 Y 2 1 "C2'" C A 9 ? ? "C3'" C A 9 ? ? "O3'" C A 9 ? ? 126.56 113.70 12.86 1.60 N 3 1 "C4'" C A 9 ? ? "C3'" C A 9 ? ? "C2'" C A 9 ? ? 108.68 102.60 6.08 1.00 N 4 1 N1 C U 32 ? ? "C1'" C U 32 ? ? "C2'" C U 32 ? ? 122.03 114.00 8.03 1.30 N 5 1 "C2'" C U 53 ? ? "C3'" C U 53 ? ? "O3'" C U 53 ? ? 127.95 113.70 14.25 1.60 N 6 1 "O3'" D GTP 101 ? ? P D G 102 ? ? "O5'" D G 102 ? ? 81.92 104.00 -22.08 1.90 Y 7 1 "O3'" D GTP 101 ? ? P D G 102 ? ? OP1 D G 102 ? ? 120.25 110.50 9.75 1.10 Y 8 1 C A ARG 302 ? ? N A PRO 303 ? ? CA A PRO 303 ? ? 130.64 119.30 11.34 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 303 ? ? -42.19 154.84 2 1 ASN A 304 ? ? -174.00 137.97 3 1 ASN A 311 ? ? 74.07 40.71 4 1 LYS A 318 ? ? -52.17 -73.65 5 1 ASP A 337 ? ? 172.21 161.10 6 1 GLN A 368 ? ? -42.54 108.32 7 1 ASP A 374 ? ? 73.85 40.12 8 1 TYR A 381 ? ? -49.25 166.20 9 1 ASP A 387 ? ? -18.77 -63.37 10 1 ARG B 402 ? ? 60.05 96.07 11 1 ASN B 411 ? ? 87.14 52.06 12 1 ASN B 413 ? ? -42.38 103.90 13 1 LYS B 418 ? ? -21.28 -70.92 14 1 ASP B 437 ? ? 177.78 155.44 15 1 SER B 443 ? ? -55.83 -178.12 16 1 ASN B 462 ? ? -43.62 -74.71 17 1 LEU B 464 ? ? -59.06 -78.09 18 1 ARG B 465 ? ? -28.95 -59.59 19 1 SER B 466 ? ? -76.59 -72.01 20 1 PHE B 470 ? ? -35.81 142.79 21 1 PHE B 472 ? ? -167.07 93.63 22 1 ASP B 474 ? ? 79.69 -11.12 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id G _pdbx_validate_planes.auth_asym_id D _pdbx_validate_planes.auth_seq_id 166 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.052 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C3'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id C _pdbx_validate_chiral.auth_comp_id A _pdbx_validate_chiral.auth_seq_id 9 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 302 ? CG ? C ARG 7 CG 2 1 Y 1 A ARG 302 ? CD ? C ARG 7 CD 3 1 Y 1 A ARG 302 ? NE ? C ARG 7 NE 4 1 Y 1 A ARG 302 ? CZ ? C ARG 7 CZ 5 1 Y 1 A ARG 302 ? NH1 ? C ARG 7 NH1 6 1 Y 1 A ARG 302 ? NH2 ? C ARG 7 NH2 7 1 Y 1 A LYS 317 ? CG ? C LYS 22 CG 8 1 Y 1 A LYS 317 ? CD ? C LYS 22 CD 9 1 Y 1 A LYS 317 ? CE ? C LYS 22 CE 10 1 Y 1 A LYS 317 ? NZ ? C LYS 22 NZ 11 1 Y 1 A ASP 319 ? CG ? C ASP 24 CG 12 1 Y 1 A ASP 319 ? OD1 ? C ASP 24 OD1 13 1 Y 1 A ASP 319 ? OD2 ? C ASP 24 OD2 14 1 Y 1 A LYS 323 ? CG ? C LYS 28 CG 15 1 Y 1 A LYS 323 ? CD ? C LYS 28 CD 16 1 Y 1 A LYS 323 ? CE ? C LYS 28 CE 17 1 Y 1 A LYS 323 ? NZ ? C LYS 28 NZ 18 1 Y 1 A LYS 345 ? CG ? C LYS 50 CG 19 1 Y 1 A LYS 345 ? CD ? C LYS 50 CD 20 1 Y 1 A LYS 345 ? CE ? C LYS 50 CE 21 1 Y 1 A LYS 345 ? NZ ? C LYS 50 NZ 22 1 Y 1 A ARG 365 ? CG ? C ARG 70 CG 23 1 Y 1 A ARG 365 ? CD ? C ARG 70 CD 24 1 Y 1 A ARG 365 ? NE ? C ARG 70 NE 25 1 Y 1 A ARG 365 ? CZ ? C ARG 70 CZ 26 1 Y 1 A ARG 365 ? NH1 ? C ARG 70 NH1 27 1 Y 1 A ARG 365 ? NH2 ? C ARG 70 NH2 28 1 Y 1 A LYS 391 ? CG ? C LYS 96 CG 29 1 Y 1 A LYS 391 ? CD ? C LYS 96 CD 30 1 Y 1 A LYS 391 ? CE ? C LYS 96 CE 31 1 Y 1 A LYS 391 ? NZ ? C LYS 96 NZ 32 1 Y 1 A MSE 392 ? CG ? C MSE 97 CG 33 1 Y 1 A MSE 392 ? SE ? C MSE 97 SE 34 1 Y 1 A MSE 392 ? CE ? C MSE 97 CE 35 1 Y 1 B THR 401 ? OG1 ? D THR 6 OG1 36 1 Y 1 B THR 401 ? CG2 ? D THR 6 CG2 37 1 Y 1 B ARG 402 ? CG ? D ARG 7 CG 38 1 Y 1 B ARG 402 ? CD ? D ARG 7 CD 39 1 Y 1 B ARG 402 ? NE ? D ARG 7 NE 40 1 Y 1 B ARG 402 ? CZ ? D ARG 7 CZ 41 1 Y 1 B ARG 402 ? NH1 ? D ARG 7 NH1 42 1 Y 1 B ARG 402 ? NH2 ? D ARG 7 NH2 43 1 Y 1 B LYS 415 ? CG ? D LYS 20 CG 44 1 Y 1 B LYS 415 ? CD ? D LYS 20 CD 45 1 Y 1 B LYS 415 ? CE ? D LYS 20 CE 46 1 Y 1 B LYS 415 ? NZ ? D LYS 20 NZ 47 1 Y 1 B LYS 417 ? CG ? D LYS 22 CG 48 1 Y 1 B LYS 417 ? CD ? D LYS 22 CD 49 1 Y 1 B LYS 417 ? CE ? D LYS 22 CE 50 1 Y 1 B LYS 417 ? NZ ? D LYS 22 NZ 51 1 Y 1 B GLU 420 ? CG ? D GLU 25 CG 52 1 Y 1 B GLU 420 ? CD ? D GLU 25 CD 53 1 Y 1 B GLU 420 ? OE1 ? D GLU 25 OE1 54 1 Y 1 B GLU 420 ? OE2 ? D GLU 25 OE2 55 1 Y 1 B LYS 423 ? CG ? D LYS 28 CG 56 1 Y 1 B LYS 423 ? CD ? D LYS 28 CD 57 1 Y 1 B LYS 423 ? CE ? D LYS 28 CE 58 1 Y 1 B LYS 423 ? NZ ? D LYS 28 NZ 59 1 Y 1 B GLN 434 ? CG ? D GLN 39 CG 60 1 Y 1 B GLN 434 ? CD ? D GLN 39 CD 61 1 Y 1 B GLN 434 ? OE1 ? D GLN 39 OE1 62 1 Y 1 B GLN 434 ? NE2 ? D GLN 39 NE2 63 1 Y 1 B ARG 442 ? CG ? D ARG 47 CG 64 1 Y 1 B ARG 442 ? CD ? D ARG 47 CD 65 1 Y 1 B ARG 442 ? NE ? D ARG 47 NE 66 1 Y 1 B ARG 442 ? CZ ? D ARG 47 CZ 67 1 Y 1 B ARG 442 ? NH1 ? D ARG 47 NH1 68 1 Y 1 B ARG 442 ? NH2 ? D ARG 47 NH2 69 1 Y 1 B GLU 456 ? CG ? D GLU 61 CG 70 1 Y 1 B GLU 456 ? CD ? D GLU 61 CD 71 1 Y 1 B GLU 456 ? OE1 ? D GLU 61 OE1 72 1 Y 1 B GLU 456 ? OE2 ? D GLU 61 OE2 73 1 Y 1 B LYS 491 ? CG ? D LYS 96 CG 74 1 Y 1 B LYS 491 ? CD ? D LYS 96 CD 75 1 Y 1 B LYS 491 ? CE ? D LYS 96 CE 76 1 Y 1 B LYS 491 ? NZ ? D LYS 96 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 296 ? C MSE 1 2 1 Y 1 A ALA 297 ? C ALA 2 3 1 Y 1 A VAL 298 ? C VAL 3 4 1 Y 1 A PRO 299 ? C PRO 4 5 1 Y 1 A GLU 300 ? C GLU 5 6 1 Y 1 A THR 301 ? C THR 6 7 1 Y 1 A LYS 393 ? C LYS 98 8 1 Y 1 B MSE 396 ? D MSE 1 9 1 Y 1 B ALA 397 ? D ALA 2 10 1 Y 1 B VAL 398 ? D VAL 3 11 1 Y 1 B PRO 399 ? D PRO 4 12 1 Y 1 B GLU 400 ? D GLU 5 13 1 Y 1 B MSE 492 ? D MSE 97 14 1 Y 1 B LYS 493 ? D LYS 98 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CO CO CO N N 146 G OP3 O N N 147 G P P N N 148 G OP1 O N N 149 G OP2 O N N 150 G "O5'" O N N 151 G "C5'" C N N 152 G "C4'" C N R 153 G "O4'" O N N 154 G "C3'" C N S 155 G "O3'" O N N 156 G "C2'" C N R 157 G "O2'" O N N 158 G "C1'" C N R 159 G N9 N Y N 160 G C8 C Y N 161 G N7 N Y N 162 G C5 C Y N 163 G C6 C N N 164 G O6 O N N 165 G N1 N N N 166 G C2 C N N 167 G N2 N N N 168 G N3 N N N 169 G C4 C Y N 170 G HOP3 H N N 171 G HOP2 H N N 172 G "H5'" H N N 173 G "H5''" H N N 174 G "H4'" H N N 175 G "H3'" H N N 176 G "HO3'" H N N 177 G "H2'" H N N 178 G "HO2'" H N N 179 G "H1'" H N N 180 G H8 H N N 181 G H1 H N N 182 G H21 H N N 183 G H22 H N N 184 GLN N N N N 185 GLN CA C N S 186 GLN C C N N 187 GLN O O N N 188 GLN CB C N N 189 GLN CG C N N 190 GLN CD C N N 191 GLN OE1 O N N 192 GLN NE2 N N N 193 GLN OXT O N N 194 GLN H H N N 195 GLN H2 H N N 196 GLN HA H N N 197 GLN HB2 H N N 198 GLN HB3 H N N 199 GLN HG2 H N N 200 GLN HG3 H N N 201 GLN HE21 H N N 202 GLN HE22 H N N 203 GLN HXT H N N 204 GLU N N N N 205 GLU CA C N S 206 GLU C C N N 207 GLU O O N N 208 GLU CB C N N 209 GLU CG C N N 210 GLU CD C N N 211 GLU OE1 O N N 212 GLU OE2 O N N 213 GLU OXT O N N 214 GLU H H N N 215 GLU H2 H N N 216 GLU HA H N N 217 GLU HB2 H N N 218 GLU HB3 H N N 219 GLU HG2 H N N 220 GLU HG3 H N N 221 GLU HE2 H N N 222 GLU HXT H N N 223 GLY N N N N 224 GLY CA C N N 225 GLY C C N N 226 GLY O O N N 227 GLY OXT O N N 228 GLY H H N N 229 GLY H2 H N N 230 GLY HA2 H N N 231 GLY HA3 H N N 232 GLY HXT H N N 233 GTP PG P N N 234 GTP O1G O N N 235 GTP O2G O N N 236 GTP O3G O N N 237 GTP O3B O N N 238 GTP PB P N N 239 GTP O1B O N N 240 GTP O2B O N N 241 GTP O3A O N N 242 GTP PA P N N 243 GTP O1A O N N 244 GTP O2A O N N 245 GTP "O5'" O N N 246 GTP "C5'" C N N 247 GTP "C4'" C N R 248 GTP "O4'" O N N 249 GTP "C3'" C N S 250 GTP "O3'" O N N 251 GTP "C2'" C N R 252 GTP "O2'" O N N 253 GTP "C1'" C N R 254 GTP N9 N Y N 255 GTP C8 C Y N 256 GTP N7 N Y N 257 GTP C5 C Y N 258 GTP C6 C N N 259 GTP O6 O N N 260 GTP N1 N N N 261 GTP C2 C N N 262 GTP N2 N N N 263 GTP N3 N N N 264 GTP C4 C Y N 265 GTP HOG2 H N N 266 GTP HOG3 H N N 267 GTP HOB2 H N N 268 GTP HOA2 H N N 269 GTP "H5'" H N N 270 GTP "H5''" H N N 271 GTP "H4'" H N N 272 GTP "H3'" H N N 273 GTP "HO3'" H N N 274 GTP "H2'" H N N 275 GTP "HO2'" H N N 276 GTP "H1'" H N N 277 GTP H8 H N N 278 GTP HN1 H N N 279 GTP HN21 H N N 280 GTP HN22 H N N 281 HIS N N N N 282 HIS CA C N S 283 HIS C C N N 284 HIS O O N N 285 HIS CB C N N 286 HIS CG C Y N 287 HIS ND1 N Y N 288 HIS CD2 C Y N 289 HIS CE1 C Y N 290 HIS NE2 N Y N 291 HIS OXT O N N 292 HIS H H N N 293 HIS H2 H N N 294 HIS HA H N N 295 HIS HB2 H N N 296 HIS HB3 H N N 297 HIS HD1 H N N 298 HIS HD2 H N N 299 HIS HE1 H N N 300 HIS HE2 H N N 301 HIS HXT H N N 302 ILE N N N N 303 ILE CA C N S 304 ILE C C N N 305 ILE O O N N 306 ILE CB C N S 307 ILE CG1 C N N 308 ILE CG2 C N N 309 ILE CD1 C N N 310 ILE OXT O N N 311 ILE H H N N 312 ILE H2 H N N 313 ILE HA H N N 314 ILE HB H N N 315 ILE HG12 H N N 316 ILE HG13 H N N 317 ILE HG21 H N N 318 ILE HG22 H N N 319 ILE HG23 H N N 320 ILE HD11 H N N 321 ILE HD12 H N N 322 ILE HD13 H N N 323 ILE HXT H N N 324 K K K N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MG MG MG N N 373 MSE N N N N 374 MSE CA C N S 375 MSE C C N N 376 MSE O O N N 377 MSE OXT O N N 378 MSE CB C N N 379 MSE CG C N N 380 MSE SE SE N N 381 MSE CE C N N 382 MSE H H N N 383 MSE H2 H N N 384 MSE HA H N N 385 MSE HXT H N N 386 MSE HB2 H N N 387 MSE HB3 H N N 388 MSE HG2 H N N 389 MSE HG3 H N N 390 MSE HE1 H N N 391 MSE HE2 H N N 392 MSE HE3 H N N 393 PHE N N N N 394 PHE CA C N S 395 PHE C C N N 396 PHE O O N N 397 PHE CB C N N 398 PHE CG C Y N 399 PHE CD1 C Y N 400 PHE CD2 C Y N 401 PHE CE1 C Y N 402 PHE CE2 C Y N 403 PHE CZ C Y N 404 PHE OXT O N N 405 PHE H H N N 406 PHE H2 H N N 407 PHE HA H N N 408 PHE HB2 H N N 409 PHE HB3 H N N 410 PHE HD1 H N N 411 PHE HD2 H N N 412 PHE HE1 H N N 413 PHE HE2 H N N 414 PHE HZ H N N 415 PHE HXT H N N 416 PRO N N N N 417 PRO CA C N S 418 PRO C C N N 419 PRO O O N N 420 PRO CB C N N 421 PRO CG C N N 422 PRO CD C N N 423 PRO OXT O N N 424 PRO H H N N 425 PRO HA H N N 426 PRO HB2 H N N 427 PRO HB3 H N N 428 PRO HG2 H N N 429 PRO HG3 H N N 430 PRO HD2 H N N 431 PRO HD3 H N N 432 PRO HXT H N N 433 SER N N N N 434 SER CA C N S 435 SER C C N N 436 SER O O N N 437 SER CB C N N 438 SER OG O N N 439 SER OXT O N N 440 SER H H N N 441 SER H2 H N N 442 SER HA H N N 443 SER HB2 H N N 444 SER HB3 H N N 445 SER HG H N N 446 SER HXT H N N 447 THR N N N N 448 THR CA C N S 449 THR C C N N 450 THR O O N N 451 THR CB C N R 452 THR OG1 O N N 453 THR CG2 C N N 454 THR OXT O N N 455 THR H H N N 456 THR H2 H N N 457 THR HA H N N 458 THR HB H N N 459 THR HG1 H N N 460 THR HG21 H N N 461 THR HG22 H N N 462 THR HG23 H N N 463 THR HXT H N N 464 TYR N N N N 465 TYR CA C N S 466 TYR C C N N 467 TYR O O N N 468 TYR CB C N N 469 TYR CG C Y N 470 TYR CD1 C Y N 471 TYR CD2 C Y N 472 TYR CE1 C Y N 473 TYR CE2 C Y N 474 TYR CZ C Y N 475 TYR OH O N N 476 TYR OXT O N N 477 TYR H H N N 478 TYR H2 H N N 479 TYR HA H N N 480 TYR HB2 H N N 481 TYR HB3 H N N 482 TYR HD1 H N N 483 TYR HD2 H N N 484 TYR HE1 H N N 485 TYR HE2 H N N 486 TYR HH H N N 487 TYR HXT H N N 488 U OP3 O N N 489 U P P N N 490 U OP1 O N N 491 U OP2 O N N 492 U "O5'" O N N 493 U "C5'" C N N 494 U "C4'" C N R 495 U "O4'" O N N 496 U "C3'" C N S 497 U "O3'" O N N 498 U "C2'" C N R 499 U "O2'" O N N 500 U "C1'" C N R 501 U N1 N N N 502 U C2 C N N 503 U O2 O N N 504 U N3 N N N 505 U C4 C N N 506 U O4 O N N 507 U C5 C N N 508 U C6 C N N 509 U HOP3 H N N 510 U HOP2 H N N 511 U "H5'" H N N 512 U "H5''" H N N 513 U "H4'" H N N 514 U "H3'" H N N 515 U "HO3'" H N N 516 U "H2'" H N N 517 U "HO2'" H N N 518 U "H1'" H N N 519 U H3 H N N 520 U H5 H N N 521 U H6 H N N 522 VAL N N N N 523 VAL CA C N S 524 VAL C C N N 525 VAL O O N N 526 VAL CB C N N 527 VAL CG1 C N N 528 VAL CG2 C N N 529 VAL OXT O N N 530 VAL H H N N 531 VAL H2 H N N 532 VAL HA H N N 533 VAL HB H N N 534 VAL HG11 H N N 535 VAL HG12 H N N 536 VAL HG13 H N N 537 VAL HG21 H N N 538 VAL HG22 H N N 539 VAL HG23 H N N 540 VAL HXT H N N 541 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 GTP PG O1G doub N N 231 GTP PG O2G sing N N 232 GTP PG O3G sing N N 233 GTP PG O3B sing N N 234 GTP O2G HOG2 sing N N 235 GTP O3G HOG3 sing N N 236 GTP O3B PB sing N N 237 GTP PB O1B doub N N 238 GTP PB O2B sing N N 239 GTP PB O3A sing N N 240 GTP O2B HOB2 sing N N 241 GTP O3A PA sing N N 242 GTP PA O1A doub N N 243 GTP PA O2A sing N N 244 GTP PA "O5'" sing N N 245 GTP O2A HOA2 sing N N 246 GTP "O5'" "C5'" sing N N 247 GTP "C5'" "C4'" sing N N 248 GTP "C5'" "H5'" sing N N 249 GTP "C5'" "H5''" sing N N 250 GTP "C4'" "O4'" sing N N 251 GTP "C4'" "C3'" sing N N 252 GTP "C4'" "H4'" sing N N 253 GTP "O4'" "C1'" sing N N 254 GTP "C3'" "O3'" sing N N 255 GTP "C3'" "C2'" sing N N 256 GTP "C3'" "H3'" sing N N 257 GTP "O3'" "HO3'" sing N N 258 GTP "C2'" "O2'" sing N N 259 GTP "C2'" "C1'" sing N N 260 GTP "C2'" "H2'" sing N N 261 GTP "O2'" "HO2'" sing N N 262 GTP "C1'" N9 sing N N 263 GTP "C1'" "H1'" sing N N 264 GTP N9 C8 sing Y N 265 GTP N9 C4 sing Y N 266 GTP C8 N7 doub Y N 267 GTP C8 H8 sing N N 268 GTP N7 C5 sing Y N 269 GTP C5 C6 sing N N 270 GTP C5 C4 doub Y N 271 GTP C6 O6 doub N N 272 GTP C6 N1 sing N N 273 GTP N1 C2 sing N N 274 GTP N1 HN1 sing N N 275 GTP C2 N2 sing N N 276 GTP C2 N3 doub N N 277 GTP N2 HN21 sing N N 278 GTP N2 HN22 sing N N 279 GTP N3 C4 sing N N 280 HIS N CA sing N N 281 HIS N H sing N N 282 HIS N H2 sing N N 283 HIS CA C sing N N 284 HIS CA CB sing N N 285 HIS CA HA sing N N 286 HIS C O doub N N 287 HIS C OXT sing N N 288 HIS CB CG sing N N 289 HIS CB HB2 sing N N 290 HIS CB HB3 sing N N 291 HIS CG ND1 sing Y N 292 HIS CG CD2 doub Y N 293 HIS ND1 CE1 doub Y N 294 HIS ND1 HD1 sing N N 295 HIS CD2 NE2 sing Y N 296 HIS CD2 HD2 sing N N 297 HIS CE1 NE2 sing Y N 298 HIS CE1 HE1 sing N N 299 HIS NE2 HE2 sing N N 300 HIS OXT HXT sing N N 301 ILE N CA sing N N 302 ILE N H sing N N 303 ILE N H2 sing N N 304 ILE CA C sing N N 305 ILE CA CB sing N N 306 ILE CA HA sing N N 307 ILE C O doub N N 308 ILE C OXT sing N N 309 ILE CB CG1 sing N N 310 ILE CB CG2 sing N N 311 ILE CB HB sing N N 312 ILE CG1 CD1 sing N N 313 ILE CG1 HG12 sing N N 314 ILE CG1 HG13 sing N N 315 ILE CG2 HG21 sing N N 316 ILE CG2 HG22 sing N N 317 ILE CG2 HG23 sing N N 318 ILE CD1 HD11 sing N N 319 ILE CD1 HD12 sing N N 320 ILE CD1 HD13 sing N N 321 ILE OXT HXT sing N N 322 LEU N CA sing N N 323 LEU N H sing N N 324 LEU N H2 sing N N 325 LEU CA C sing N N 326 LEU CA CB sing N N 327 LEU CA HA sing N N 328 LEU C O doub N N 329 LEU C OXT sing N N 330 LEU CB CG sing N N 331 LEU CB HB2 sing N N 332 LEU CB HB3 sing N N 333 LEU CG CD1 sing N N 334 LEU CG CD2 sing N N 335 LEU CG HG sing N N 336 LEU CD1 HD11 sing N N 337 LEU CD1 HD12 sing N N 338 LEU CD1 HD13 sing N N 339 LEU CD2 HD21 sing N N 340 LEU CD2 HD22 sing N N 341 LEU CD2 HD23 sing N N 342 LEU OXT HXT sing N N 343 LYS N CA sing N N 344 LYS N H sing N N 345 LYS N H2 sing N N 346 LYS CA C sing N N 347 LYS CA CB sing N N 348 LYS CA HA sing N N 349 LYS C O doub N N 350 LYS C OXT sing N N 351 LYS CB CG sing N N 352 LYS CB HB2 sing N N 353 LYS CB HB3 sing N N 354 LYS CG CD sing N N 355 LYS CG HG2 sing N N 356 LYS CG HG3 sing N N 357 LYS CD CE sing N N 358 LYS CD HD2 sing N N 359 LYS CD HD3 sing N N 360 LYS CE NZ sing N N 361 LYS CE HE2 sing N N 362 LYS CE HE3 sing N N 363 LYS NZ HZ1 sing N N 364 LYS NZ HZ2 sing N N 365 LYS NZ HZ3 sing N N 366 LYS OXT HXT sing N N 367 MSE N CA sing N N 368 MSE N H sing N N 369 MSE N H2 sing N N 370 MSE CA C sing N N 371 MSE CA CB sing N N 372 MSE CA HA sing N N 373 MSE C O doub N N 374 MSE C OXT sing N N 375 MSE OXT HXT sing N N 376 MSE CB CG sing N N 377 MSE CB HB2 sing N N 378 MSE CB HB3 sing N N 379 MSE CG SE sing N N 380 MSE CG HG2 sing N N 381 MSE CG HG3 sing N N 382 MSE SE CE sing N N 383 MSE CE HE1 sing N N 384 MSE CE HE2 sing N N 385 MSE CE HE3 sing N N 386 PHE N CA sing N N 387 PHE N H sing N N 388 PHE N H2 sing N N 389 PHE CA C sing N N 390 PHE CA CB sing N N 391 PHE CA HA sing N N 392 PHE C O doub N N 393 PHE C OXT sing N N 394 PHE CB CG sing N N 395 PHE CB HB2 sing N N 396 PHE CB HB3 sing N N 397 PHE CG CD1 doub Y N 398 PHE CG CD2 sing Y N 399 PHE CD1 CE1 sing Y N 400 PHE CD1 HD1 sing N N 401 PHE CD2 CE2 doub Y N 402 PHE CD2 HD2 sing N N 403 PHE CE1 CZ doub Y N 404 PHE CE1 HE1 sing N N 405 PHE CE2 CZ sing Y N 406 PHE CE2 HE2 sing N N 407 PHE CZ HZ sing N N 408 PHE OXT HXT sing N N 409 PRO N CA sing N N 410 PRO N CD sing N N 411 PRO N H sing N N 412 PRO CA C sing N N 413 PRO CA CB sing N N 414 PRO CA HA sing N N 415 PRO C O doub N N 416 PRO C OXT sing N N 417 PRO CB CG sing N N 418 PRO CB HB2 sing N N 419 PRO CB HB3 sing N N 420 PRO CG CD sing N N 421 PRO CG HG2 sing N N 422 PRO CG HG3 sing N N 423 PRO CD HD2 sing N N 424 PRO CD HD3 sing N N 425 PRO OXT HXT sing N N 426 SER N CA sing N N 427 SER N H sing N N 428 SER N H2 sing N N 429 SER CA C sing N N 430 SER CA CB sing N N 431 SER CA HA sing N N 432 SER C O doub N N 433 SER C OXT sing N N 434 SER CB OG sing N N 435 SER CB HB2 sing N N 436 SER CB HB3 sing N N 437 SER OG HG sing N N 438 SER OXT HXT sing N N 439 THR N CA sing N N 440 THR N H sing N N 441 THR N H2 sing N N 442 THR CA C sing N N 443 THR CA CB sing N N 444 THR CA HA sing N N 445 THR C O doub N N 446 THR C OXT sing N N 447 THR CB OG1 sing N N 448 THR CB CG2 sing N N 449 THR CB HB sing N N 450 THR OG1 HG1 sing N N 451 THR CG2 HG21 sing N N 452 THR CG2 HG22 sing N N 453 THR CG2 HG23 sing N N 454 THR OXT HXT sing N N 455 TYR N CA sing N N 456 TYR N H sing N N 457 TYR N H2 sing N N 458 TYR CA C sing N N 459 TYR CA CB sing N N 460 TYR CA HA sing N N 461 TYR C O doub N N 462 TYR C OXT sing N N 463 TYR CB CG sing N N 464 TYR CB HB2 sing N N 465 TYR CB HB3 sing N N 466 TYR CG CD1 doub Y N 467 TYR CG CD2 sing Y N 468 TYR CD1 CE1 sing Y N 469 TYR CD1 HD1 sing N N 470 TYR CD2 CE2 doub Y N 471 TYR CD2 HD2 sing N N 472 TYR CE1 CZ doub Y N 473 TYR CE1 HE1 sing N N 474 TYR CE2 CZ sing Y N 475 TYR CE2 HE2 sing N N 476 TYR CZ OH sing N N 477 TYR OH HH sing N N 478 TYR OXT HXT sing N N 479 U OP3 P sing N N 480 U OP3 HOP3 sing N N 481 U P OP1 doub N N 482 U P OP2 sing N N 483 U P "O5'" sing N N 484 U OP2 HOP2 sing N N 485 U "O5'" "C5'" sing N N 486 U "C5'" "C4'" sing N N 487 U "C5'" "H5'" sing N N 488 U "C5'" "H5''" sing N N 489 U "C4'" "O4'" sing N N 490 U "C4'" "C3'" sing N N 491 U "C4'" "H4'" sing N N 492 U "O4'" "C1'" sing N N 493 U "C3'" "O3'" sing N N 494 U "C3'" "C2'" sing N N 495 U "C3'" "H3'" sing N N 496 U "O3'" "HO3'" sing N N 497 U "C2'" "O2'" sing N N 498 U "C2'" "C1'" sing N N 499 U "C2'" "H2'" sing N N 500 U "O2'" "HO2'" sing N N 501 U "C1'" N1 sing N N 502 U "C1'" "H1'" sing N N 503 U N1 C2 sing N N 504 U N1 C6 sing N N 505 U C2 O2 doub N N 506 U C2 N3 sing N N 507 U N3 C4 sing N N 508 U N3 H3 sing N N 509 U C4 O4 doub N N 510 U C4 C5 sing N N 511 U C5 C6 doub N N 512 U C5 H5 sing N N 513 U C6 H6 sing N N 514 VAL N CA sing N N 515 VAL N H sing N N 516 VAL N H2 sing N N 517 VAL CA C sing N N 518 VAL CA CB sing N N 519 VAL CA HA sing N N 520 VAL C O doub N N 521 VAL C OXT sing N N 522 VAL CB CG1 sing N N 523 VAL CB CG2 sing N N 524 VAL CB HB sing N N 525 VAL CG1 HG11 sing N N 526 VAL CG1 HG12 sing N N 527 VAL CG1 HG13 sing N N 528 VAL CG2 HG21 sing N N 529 VAL CG2 HG22 sing N N 530 VAL CG2 HG23 sing N N 531 VAL OXT HXT sing N N 532 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3CUN 'double helix' 3CUN 'a-form double helix' 3CUN 'hairpin loop' 3CUN tetraloop 3CUN 'bulge loop' 3CUN 'mismatched base pair' 3CUN 'internal loop' 3CUN 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 12 1_555 A C 7 1_555 -0.755 0.219 -0.013 3.174 9.240 3.322 1 C_G12:C7_C C 12 ? C 7 ? 19 1 1 A C 13 1_555 A G 6 1_555 0.369 0.020 -0.225 6.264 -7.725 3.642 2 C_C13:G6_C C 13 ? C 6 ? 19 1 1 A C 14 1_555 A G 5 1_555 -0.545 -0.264 -0.419 4.526 -8.962 3.315 3 C_C14:G5_C C 14 ? C 5 ? 19 1 1 A A 15 1_555 A U 4 1_555 0.258 -0.133 0.543 -7.429 -11.611 5.413 4 C_A15:U4_C C 15 ? C 4 ? 20 1 1 A U 16 1_555 A A 3 1_555 -0.373 0.175 0.378 -6.461 -22.768 2.629 5 C_U16:A3_C C 16 ? C 3 ? 20 1 1 A U 17 1_555 A G 2 1_555 2.504 -0.547 0.279 3.558 -11.508 1.988 6 C_U17:G2_C C 17 ? C 2 ? 28 ? 1 A C 19 1_555 A GTP 1 1_555 0.474 -0.222 -0.728 7.234 8.613 -0.032 7 C_C19:GTP1_C C 19 ? C 1 ? 19 1 1 A C 20 1_555 A G 51 1_555 -0.487 0.253 0.629 -14.155 4.878 4.583 8 C_C20:G51_C C 20 ? C 51 ? 19 1 1 A G 21 1_555 A C 50 1_555 -0.456 0.123 -0.733 -23.845 -32.053 5.149 9 C_G21:C50_C C 21 ? C 50 ? 19 1 1 A C 22 1_555 A G 49 1_555 -0.025 -0.242 0.724 -18.086 -12.578 -9.025 10 C_C22:G49_C C 22 ? C 49 ? 19 1 1 A A 23 1_555 A G 48 1_555 0.311 1.286 0.063 -6.771 1.376 -21.081 11 C_A23:G48_C C 23 ? C 48 ? 8 ? 1 A G 24 1_555 A U 47 1_555 4.861 0.807 -0.254 29.103 8.210 -58.566 12 C_G24:U47_C C 24 ? C 47 ? ? 1 1 A G 25 1_555 A U 44 1_555 -2.255 -0.749 -0.750 -3.968 -0.888 -4.884 13 C_G25:U44_C C 25 ? C 44 ? 28 ? 1 A C 26 1_555 A G 43 1_555 0.823 -0.633 0.154 7.575 -19.470 -0.070 14 C_C26:G43_C C 26 ? C 43 ? 19 1 1 A C 27 1_555 A G 42 1_555 -0.049 -0.045 -0.099 10.631 -8.150 -1.335 15 C_C27:G42_C C 27 ? C 42 ? 19 1 1 A C 28 1_555 A G 41 1_555 0.054 -0.454 -0.172 4.209 -9.427 -3.052 16 C_C28:G41_C C 28 ? C 41 ? 19 1 1 A C 29 1_555 A G 40 1_555 0.213 -0.296 -0.092 7.907 -9.141 -5.922 17 C_C29:G40_C C 29 ? C 40 ? 19 1 1 A G 55 1_555 A C 91 1_555 -0.108 0.128 -0.007 -3.547 -2.389 6.834 18 C_G55:C91_C C 55 ? C 91 ? 19 1 1 A G 56 1_555 A C 90 1_555 -0.498 -0.058 0.101 -6.069 -18.257 11.556 19 C_G56:C90_C C 56 ? C 90 ? 19 1 1 A G 58 1_555 A A 88 1_555 0.758 1.462 0.345 -6.556 -3.301 -8.043 20 C_G58:A88_C C 58 ? C 88 ? 8 1 1 A G 59 1_555 A C 87 1_555 -0.131 -0.318 0.240 1.601 -10.392 -5.116 21 C_G59:C87_C C 59 ? C 87 ? 19 1 1 A G 61 1_555 A C 85 1_555 -1.310 0.111 -0.280 1.002 -10.044 -5.724 22 C_G61:C85_C C 61 ? C 85 ? ? ? 1 A G 62 1_555 A C 84 1_555 -1.547 -0.523 1.099 10.890 -10.807 -3.152 23 C_G62:C84_C C 62 ? C 84 ? 19 1 1 A U 63 1_555 A A 83 1_555 0.725 -0.111 0.068 13.032 1.700 7.425 24 C_U63:A83_C C 63 ? C 83 ? 20 1 1 A A 64 1_555 A U 82 1_555 -0.538 -0.302 -0.240 -10.437 -12.276 7.723 25 C_A64:U82_C C 64 ? C 82 ? 20 1 1 A C 65 1_555 A G 81 1_555 -0.061 0.325 0.323 -0.306 -11.023 3.206 26 C_C65:G81_C C 65 ? C 81 ? 19 1 1 A G 66 1_555 A C 80 1_555 -0.365 0.445 -0.038 -3.341 -12.531 21.504 27 C_G66:C80_C C 66 ? C 80 ? ? 1 1 A A 67 1_555 A U 79 1_555 -0.321 -0.037 0.127 5.153 -8.711 -1.104 28 C_A67:U79_C C 67 ? C 79 ? 20 1 1 A G 68 1_555 A C 78 1_555 -0.593 -0.132 0.219 6.037 -12.295 12.347 29 C_G68:C78_C C 68 ? C 78 ? 19 1 1 A G 69 1_555 A C 77 1_555 -0.200 0.020 0.033 -3.466 -19.591 0.542 30 C_G69:C77_C C 69 ? C 77 ? 19 1 1 A U 70 1_555 A U 76 1_555 2.897 -1.769 0.498 -5.066 2.754 2.197 31 C_U70:U76_C C 70 ? C 76 ? 16 1 1 B A 11 1_555 B G 8 1_555 -7.060 -5.399 0.561 -21.295 -0.317 -13.229 32 D_A111:G108_D D 111 ? D 108 ? ? ? 1 B G 12 1_555 B C 7 1_555 0.159 0.224 0.085 -4.408 2.967 3.523 33 D_G112:C107_D D 112 ? D 107 ? 19 1 1 B C 13 1_555 B G 6 1_555 -0.928 0.116 -0.208 2.228 -1.405 -2.289 34 D_C113:G106_D D 113 ? D 106 ? 19 1 1 B C 14 1_555 B G 5 1_555 0.936 -0.535 -0.274 4.679 -10.247 -0.939 35 D_C114:G105_D D 114 ? D 105 ? 19 1 1 B A 15 1_555 B U 4 1_555 -0.245 -0.002 0.324 8.847 -17.556 2.211 36 D_A115:U104_D D 115 ? D 104 ? 20 1 1 B U 16 1_555 B A 3 1_555 -0.727 0.166 -0.168 -1.009 -22.356 6.751 37 D_U116:A103_D D 116 ? D 103 ? 20 1 1 B U 17 1_555 B G 2 1_555 1.039 -0.137 0.644 -3.844 5.303 -1.286 38 D_U117:G102_D D 117 ? D 102 ? 28 1 1 B C 19 1_555 B GTP 1 1_555 -0.713 0.365 -1.097 9.435 -4.325 1.321 39 D_C119:GTP101_D D 119 ? D 101 ? ? 1 1 B C 20 1_555 B G 51 1_555 -0.390 0.111 -0.422 13.492 6.128 -0.388 40 D_C120:G151_D D 120 ? D 151 ? 19 1 1 B G 21 1_555 B C 50 1_555 -1.023 1.301 0.528 -12.244 0.678 25.956 41 D_G121:C150_D D 121 ? D 150 ? ? ? 1 B C 22 1_555 B G 49 1_555 -0.422 0.306 -0.162 -2.190 -16.463 -8.889 42 D_C122:G149_D D 122 ? D 149 ? ? ? 1 B G 24 1_555 B U 47 1_555 4.639 0.902 -0.520 21.399 25.831 -51.761 43 D_G124:U147_D D 124 ? D 147 ? ? 1 1 B G 25 1_555 B U 44 1_555 -4.047 -0.923 0.228 4.639 0.916 8.687 44 D_G125:U144_D D 125 ? D 144 ? 28 ? 1 B C 26 1_555 B G 43 1_555 -1.205 0.148 -0.812 17.622 -13.823 -8.427 45 D_C126:G143_D D 126 ? D 143 ? ? 1 1 B C 27 1_555 B G 42 1_555 0.645 0.014 -0.334 -0.480 12.726 9.789 46 D_C127:G142_D D 127 ? D 142 ? 19 1 1 B C 28 1_555 B G 41 1_555 0.856 -0.108 -0.130 -8.342 -1.981 10.519 47 D_C128:G141_D D 128 ? D 141 ? 19 1 1 B C 29 1_555 B G 40 1_555 1.785 -0.168 0.094 -7.499 -2.936 13.596 48 D_C129:G140_D D 129 ? D 140 ? ? 1 1 B G 55 1_555 B C 91 1_555 -1.490 0.185 -1.429 -17.126 -8.651 12.245 49 D_G155:C191_D D 155 ? D 191 ? ? ? 1 B G 58 1_555 B A 88 1_555 3.388 1.853 1.012 -10.555 -9.929 21.438 50 D_G158:A188_D D 158 ? D 188 ? ? ? 1 B G 59 1_555 B C 87 1_555 -1.351 -0.020 0.164 4.652 -22.877 2.149 51 D_G159:C187_D D 159 ? D 187 ? ? 1 1 B U 60 1_555 B G 86 1_555 0.961 0.303 1.526 -11.803 -9.837 2.289 52 D_U160:G186_D D 160 ? D 186 ? ? ? 1 B G 61 1_555 B C 85 1_555 -1.022 -0.439 0.894 1.229 -15.853 6.057 53 D_G161:C185_D D 161 ? D 185 ? 19 1 1 B G 62 1_555 B C 84 1_555 -0.226 -0.374 0.154 -5.546 -16.006 -0.167 54 D_G162:C184_D D 162 ? D 184 ? 19 1 1 B U 63 1_555 B A 83 1_555 -0.443 0.102 -0.291 5.103 -14.181 -1.014 55 D_U163:A183_D D 163 ? D 183 ? 20 1 1 B A 64 1_555 B U 82 1_555 1.308 -0.034 0.010 -0.276 -14.619 -1.818 56 D_A164:U182_D D 164 ? D 182 ? 20 1 1 B C 65 1_555 B G 81 1_555 0.035 -0.190 0.465 0.724 -8.967 2.337 57 D_C165:G181_D D 165 ? D 181 ? 19 1 1 B G 66 1_555 B C 80 1_555 -0.496 0.193 -0.736 -12.244 -13.378 -1.589 58 D_G166:C180_D D 166 ? D 180 ? 19 1 1 B A 67 1_555 B U 79 1_555 -0.180 -0.056 -0.702 -8.738 -9.899 3.288 59 D_A167:U179_D D 167 ? D 179 ? 20 1 1 B G 68 1_555 B C 78 1_555 -0.756 -0.457 -0.152 -1.992 -8.163 0.253 60 D_G168:C178_D D 168 ? D 178 ? 19 1 1 B G 69 1_555 B C 77 1_555 -0.354 -0.231 -1.021 -20.859 -21.399 0.866 61 D_G169:C177_D D 169 ? D 177 ? 19 1 1 B U 70 1_555 B U 76 1_555 2.914 -1.708 -0.155 -2.647 -6.756 4.186 62 D_U170:U176_D D 170 ? D 176 ? 16 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 12 1_555 A C 7 1_555 A C 13 1_555 A G 6 1_555 0.677 -0.918 3.223 0.979 19.077 34.585 -3.457 -0.897 2.429 29.473 -1.512 39.369 1 CC_G12C13:G6C7_CC C 12 ? C 7 ? C 13 ? C 6 ? 1 A C 13 1_555 A G 6 1_555 A C 14 1_555 A G 5 1_555 -0.047 -2.140 3.316 3.152 12.797 24.523 -7.097 0.748 1.956 27.716 -6.826 27.792 2 CC_C13C14:G5G6_CC C 13 ? C 6 ? C 14 ? C 5 ? 1 A C 14 1_555 A G 5 1_555 A A 15 1_555 A U 4 1_555 0.527 -1.938 3.372 -6.526 16.785 32.715 -5.009 -1.593 2.035 27.369 10.641 37.225 3 CC_C14A15:U4G5_CC C 14 ? C 5 ? C 15 ? C 4 ? 1 A A 15 1_555 A U 4 1_555 A U 16 1_555 A A 3 1_555 -0.517 -1.444 2.948 0.390 9.980 31.856 -3.904 0.954 2.393 17.648 -0.689 33.346 4 CC_A15U16:A3U4_CC C 15 ? C 4 ? C 16 ? C 3 ? 1 A U 16 1_555 A A 3 1_555 A U 17 1_555 A G 2 1_555 -0.045 -0.797 2.979 0.592 2.911 40.638 -1.434 0.124 2.917 4.185 -0.851 40.742 5 CC_U16U17:G2A3_CC C 16 ? C 3 ? C 17 ? C 2 ? 1 A U 17 1_555 A G 2 1_555 A C 19 1_555 A GTP 1 1_555 -1.917 -1.944 2.799 6.411 7.930 47.108 -2.865 2.738 2.199 9.788 -7.913 48.137 6 CC_U17C19:GTP1G2_CC C 17 ? C 2 ? C 19 ? C 1 ? 1 A C 19 1_555 A GTP 1 1_555 A C 20 1_555 A G 51 1_555 0.932 -2.238 3.798 -8.239 12.448 30.067 -5.932 -2.973 2.382 22.347 14.790 33.492 7 CC_C19C20:G51GTP1_CC C 19 ? C 1 ? C 20 ? C 51 ? 1 A C 20 1_555 A G 51 1_555 A G 21 1_555 A C 50 1_555 0.603 -1.995 3.413 11.250 11.992 32.223 -4.877 0.580 2.596 20.058 -18.817 36.077 8 CC_C20G21:C50G51_CC C 20 ? C 51 ? C 21 ? C 50 ? 1 A G 21 1_555 A C 50 1_555 A C 22 1_555 A G 49 1_555 -1.479 -1.582 3.140 -18.217 3.502 35.423 -2.747 -0.047 3.323 5.329 27.721 39.848 9 CC_G21C22:G49C50_CC C 21 ? C 50 ? C 22 ? C 49 ? 1 A C 22 1_555 A G 49 1_555 A A 23 1_555 A G 48 1_555 -1.346 -1.342 2.730 5.266 6.572 33.666 -3.025 2.879 2.208 11.132 -8.920 34.674 10 CC_C22A23:G48G49_CC C 22 ? C 49 ? C 23 ? C 48 ? 1 A A 23 1_555 A G 48 1_555 A G 24 1_555 A U 47 1_555 -1.111 -1.643 2.852 7.070 -5.041 40.757 -1.846 2.217 2.804 -7.140 -10.015 41.634 11 CC_A23G24:U47G48_CC C 23 ? C 48 ? C 24 ? C 47 ? 1 A G 25 1_555 A U 44 1_555 A C 26 1_555 A G 43 1_555 -0.157 -0.841 3.129 -7.117 -0.636 47.206 -0.991 -0.352 3.130 -0.789 8.827 47.713 12 CC_G25C26:G43U44_CC C 25 ? C 44 ? C 26 ? C 43 ? 1 A C 26 1_555 A G 43 1_555 A C 27 1_555 A G 42 1_555 0.377 -1.750 3.331 1.775 -1.051 29.612 -3.188 -0.351 3.406 -2.052 -3.467 29.682 13 CC_C26C27:G42G43_CC C 26 ? C 43 ? C 27 ? C 42 ? 1 A C 27 1_555 A G 42 1_555 A C 28 1_555 A G 41 1_555 0.137 -2.796 3.414 1.028 5.112 28.206 -6.764 -0.051 2.876 10.377 -2.087 28.675 14 CC_C27C28:G41G42_CC C 27 ? C 42 ? C 28 ? C 41 ? 1 A C 28 1_555 A G 41 1_555 A C 29 1_555 A G 40 1_555 -0.588 -1.918 3.332 0.547 1.154 30.796 -3.834 1.213 3.249 2.172 -1.029 30.821 15 CC_C28C29:G40G41_CC C 28 ? C 41 ? C 29 ? C 40 ? 1 A G 55 1_555 A C 91 1_555 A G 56 1_555 A C 90 1_555 0.388 -1.753 3.458 5.357 2.252 28.841 -3.960 0.439 3.330 4.463 -10.619 29.409 16 CC_G55G56:C90C91_CC C 55 ? C 91 ? C 56 ? C 90 ? 1 A G 56 1_555 A C 90 1_555 A G 58 1_555 A A 88 1_555 -1.523 -0.995 6.425 -0.429 11.170 68.510 -1.666 1.309 6.228 9.856 0.379 69.306 17 CC_G56G58:A88C90_CC C 56 ? C 90 ? C 58 ? C 88 ? 1 A G 58 1_555 A A 88 1_555 A G 59 1_555 A C 87 1_555 0.457 -2.167 2.760 1.786 14.626 24.843 -6.554 -0.649 1.331 30.782 -3.758 28.825 18 CC_G58G59:C87A88_CC C 58 ? C 88 ? C 59 ? C 87 ? 1 A G 59 1_555 A C 87 1_555 A G 61 1_555 A C 85 1_555 -0.594 -4.163 5.777 -5.091 27.669 63.604 -5.270 0.232 3.924 25.010 4.602 68.947 19 CC_G59G61:C85C87_CC C 59 ? C 87 ? C 61 ? C 85 ? 1 A G 61 1_555 A C 85 1_555 A G 62 1_555 A C 84 1_555 0.972 -1.868 2.729 -8.717 -3.866 33.945 -2.609 -2.684 2.599 -6.466 14.577 35.221 20 CC_G61G62:C84C85_CC C 61 ? C 85 ? C 62 ? C 84 ? 1 A G 62 1_555 A C 84 1_555 A U 63 1_555 A A 83 1_555 0.205 -1.203 3.214 5.486 1.990 43.607 -1.791 0.234 3.161 2.665 -7.345 43.977 21 CC_G62U63:A83C84_CC C 62 ? C 84 ? C 63 ? C 83 ? 1 A U 63 1_555 A A 83 1_555 A A 64 1_555 A U 82 1_555 0.230 -1.833 3.429 4.741 26.189 25.704 -5.880 0.175 1.162 46.011 -8.330 36.838 22 CC_U63A64:U82A83_CC C 63 ? C 83 ? C 64 ? C 82 ? 1 A A 64 1_555 A U 82 1_555 A C 65 1_555 A G 81 1_555 -0.431 -1.033 2.977 -6.317 3.010 34.209 -2.137 -0.151 2.909 5.052 10.602 34.897 23 CC_A64C65:G81U82_CC C 64 ? C 82 ? C 65 ? C 81 ? 1 A C 65 1_555 A G 81 1_555 A G 66 1_555 A C 80 1_555 0.941 -1.198 3.317 1.586 3.902 31.956 -2.853 -1.413 3.194 7.048 -2.866 32.225 24 CC_C65G66:C80G81_CC C 65 ? C 81 ? C 66 ? C 80 ? 1 A G 66 1_555 A C 80 1_555 A A 67 1_555 A U 79 1_555 -1.013 -1.547 2.973 -1.316 3.901 32.000 -3.400 1.616 2.808 7.039 2.375 32.257 25 CC_G66A67:U79C80_CC C 66 ? C 80 ? C 67 ? C 79 ? 1 A A 67 1_555 A U 79 1_555 A G 68 1_555 A C 78 1_555 0.492 -1.176 3.103 -0.702 7.627 28.373 -3.797 -1.106 2.689 15.213 1.400 29.368 26 CC_A67G68:C78U79_CC C 67 ? C 79 ? C 68 ? C 78 ? 1 A G 68 1_555 A C 78 1_555 A G 69 1_555 A C 77 1_555 0.098 -2.202 3.353 1.084 7.126 32.308 -5.017 0.002 2.819 12.611 -1.918 33.081 27 CC_G68G69:C77C78_CC C 68 ? C 78 ? C 69 ? C 77 ? 1 A G 69 1_555 A C 77 1_555 A U 70 1_555 A U 76 1_555 0.629 -1.320 3.268 -0.552 2.727 50.057 -1.752 -0.781 3.190 3.220 0.652 50.129 28 CC_G69U70:U76C77_CC C 69 ? C 77 ? C 70 ? C 76 ? 1 B A 11 1_555 B G 8 1_555 B G 12 1_555 B C 7 1_555 1.422 -0.867 2.993 -2.927 7.645 54.060 -1.353 -1.706 2.781 8.357 3.199 54.630 29 DD_A111G112:C107G108_DD D 111 ? D 108 ? D 112 ? D 107 ? 1 B G 12 1_555 B C 7 1_555 B C 13 1_555 B G 6 1_555 -1.007 -1.853 3.228 1.477 5.869 25.048 -5.661 2.637 2.668 13.287 -3.344 25.757 30 DD_G112C113:G106C107_DD D 112 ? D 107 ? D 113 ? D 106 ? 1 B C 13 1_555 B G 6 1_555 B C 14 1_555 B G 5 1_555 1.084 -2.121 3.413 3.316 -0.416 34.113 -3.530 -1.285 3.524 -0.708 -5.636 34.271 31 DD_C113C114:G105G106_DD D 113 ? D 106 ? D 114 ? D 105 ? 1 B C 14 1_555 B G 5 1_555 B A 15 1_555 B U 4 1_555 -0.539 -2.204 3.110 -4.163 11.615 22.857 -7.509 0.270 1.858 26.935 9.654 25.936 32 DD_C114A115:U104G105_DD D 114 ? D 105 ? D 115 ? D 104 ? 1 B A 15 1_555 B U 4 1_555 B U 16 1_555 B A 3 1_555 0.115 -1.065 3.485 4.382 14.575 31.405 -4.007 0.477 2.732 25.161 -7.565 34.815 33 DD_A115U116:A103U104_DD D 115 ? D 104 ? D 116 ? D 103 ? 1 B U 16 1_555 B A 3 1_555 B U 17 1_555 B G 2 1_555 -0.041 -1.404 3.584 -8.326 8.910 38.839 -3.065 -0.916 3.144 13.014 12.161 40.638 34 DD_U116U117:G102A103_DD D 116 ? D 103 ? D 117 ? D 102 ? 1 B U 17 1_555 B G 2 1_555 B C 19 1_555 B GTP 1 1_555 -1.015 -1.945 2.568 17.896 -1.215 44.941 -2.311 2.279 2.093 -1.520 -22.385 48.216 35 DD_U117C119:GTP101G102_DD D 117 ? D 102 ? D 119 ? D 101 ? 1 B C 19 1_555 B GTP 1 1_555 B C 20 1_555 B G 51 1_555 0.053 -2.117 2.868 -6.118 12.563 27.895 -5.727 -0.968 1.728 24.230 11.799 31.137 36 DD_C119C120:G151GTP101_DD D 119 ? D 101 ? D 120 ? D 151 ? 1 B C 20 1_555 B G 51 1_555 B G 21 1_555 B C 50 1_555 1.922 -2.333 3.879 -5.650 3.224 28.406 -5.407 -5.169 3.167 6.463 11.327 29.126 37 DD_C120G121:C150G151_DD D 120 ? D 151 ? D 121 ? D 150 ? 1 B G 21 1_555 B C 50 1_555 B C 22 1_555 B G 49 1_555 -1.433 -2.007 3.351 13.919 0.228 35.526 -3.103 3.869 2.615 0.358 -21.807 38.074 38 DD_G121C122:G149C150_DD D 121 ? D 150 ? D 122 ? D 149 ? 1 B C 22 1_555 B G 49 1_555 B G 24 1_555 B U 47 1_555 -1.165 -2.847 6.488 17.184 26.912 70.477 -3.760 1.874 4.948 22.229 -14.194 76.512 39 DD_C122G124:U147G149_DD D 122 ? D 149 ? D 124 ? D 147 ? 1 B G 25 1_555 B U 44 1_555 B C 26 1_555 B G 43 1_555 -0.797 -2.198 2.900 4.339 -2.674 42.177 -2.791 1.494 2.935 -3.699 -6.003 42.469 40 DD_G125C126:G143U144_DD D 125 ? D 144 ? D 126 ? D 143 ? 1 B C 26 1_555 B G 43 1_555 B C 27 1_555 B G 42 1_555 0.872 -1.986 3.833 -4.418 3.032 35.728 -3.689 -2.113 3.529 4.907 7.152 36.115 41 DD_C126C127:G142G143_DD D 126 ? D 143 ? D 127 ? D 142 ? 1 B C 27 1_555 B G 42 1_555 B C 28 1_555 B G 41 1_555 -0.367 -1.862 3.296 1.976 3.892 34.974 -3.639 0.892 3.053 6.445 -3.272 35.237 42 DD_C127C128:G141G142_DD D 127 ? D 142 ? D 128 ? D 141 ? 1 B C 28 1_555 B G 41 1_555 B C 29 1_555 B G 40 1_555 -0.240 -1.938 3.326 1.413 6.370 30.660 -4.737 0.699 2.861 11.879 -2.634 31.331 43 DD_C128C129:G140G141_DD D 128 ? D 141 ? D 129 ? D 140 ? 1 B G 58 1_555 B A 88 1_555 B G 59 1_555 B C 87 1_555 -1.696 -1.595 2.467 5.221 11.405 16.821 -6.996 5.857 0.703 33.570 -15.367 20.956 44 DD_G158G159:C187A188_DD D 158 ? D 188 ? D 159 ? D 187 ? 1 B G 59 1_555 B C 87 1_555 B U 60 1_555 B G 86 1_555 0.239 -1.071 3.727 -8.311 6.713 41.219 -2.231 -1.264 3.411 9.348 11.572 42.523 45 DD_G159U160:G186C187_DD D 159 ? D 187 ? D 160 ? D 186 ? 1 B U 60 1_555 B G 86 1_555 B G 61 1_555 B C 85 1_555 0.144 -2.431 2.163 1.358 7.776 25.138 -6.489 -0.115 1.367 17.329 -3.027 26.329 46 DD_U160G161:C185G186_DD D 160 ? D 186 ? D 161 ? D 185 ? 1 B G 61 1_555 B C 85 1_555 B G 62 1_555 B C 84 1_555 -0.056 -1.331 3.423 3.172 6.957 38.609 -2.813 0.464 3.132 10.397 -4.741 39.330 47 DD_G161G162:C184C185_DD D 161 ? D 185 ? D 162 ? D 184 ? 1 B G 62 1_555 B C 84 1_555 B U 63 1_555 B A 83 1_555 -0.703 -0.932 2.846 2.439 5.501 32.498 -2.420 1.583 2.600 9.726 -4.311 33.035 48 DD_G162U163:A183C184_DD D 162 ? D 184 ? D 163 ? D 183 ? 1 B U 63 1_555 B A 83 1_555 B A 64 1_555 B U 82 1_555 0.443 -1.406 3.721 -1.070 6.807 39.648 -2.896 -0.778 3.431 9.944 1.562 40.218 49 DD_U163A164:U182A183_DD D 163 ? D 183 ? D 164 ? D 182 ? 1 B A 64 1_555 B U 82 1_555 B C 65 1_555 B G 81 1_555 0.586 -2.110 3.089 -1.894 5.439 26.137 -5.793 -1.695 2.557 11.844 4.125 26.753 50 DD_A164C165:G181U182_DD D 164 ? D 182 ? D 165 ? D 181 ? 1 B C 65 1_555 B G 81 1_555 B G 66 1_555 B C 80 1_555 -0.416 -2.316 3.536 5.605 6.686 24.037 -7.092 2.497 2.643 15.418 -12.925 25.550 51 DD_C165G166:C180G181_DD D 165 ? D 181 ? D 166 ? D 180 ? 1 B G 66 1_555 B C 80 1_555 B A 67 1_555 B U 79 1_555 -0.178 -1.418 3.144 -3.300 12.447 32.468 -4.047 -0.149 2.458 21.248 5.633 34.865 52 DD_G166A167:U179C180_DD D 166 ? D 180 ? D 167 ? D 179 ? 1 B A 67 1_555 B U 79 1_555 B G 68 1_555 B C 78 1_555 -0.232 -1.617 3.164 -8.141 7.140 27.127 -4.639 -1.168 2.622 14.510 16.543 29.171 53 DD_A167G168:C178U179_DD D 167 ? D 179 ? D 168 ? D 178 ? 1 B G 68 1_555 B C 78 1_555 B G 69 1_555 B C 77 1_555 0.399 -1.863 3.953 5.588 16.197 32.236 -5.448 0.212 2.766 26.928 -9.291 36.399 54 DD_G168G169:C177C178_DD D 168 ? D 178 ? D 169 ? D 177 ? 1 B G 69 1_555 B C 77 1_555 B U 70 1_555 B U 76 1_555 0.594 -0.829 2.928 -4.273 1.752 48.269 -1.129 -1.015 2.839 2.137 5.211 48.476 55 DD_G169U170:U176C177_DD D 169 ? D 177 ? D 170 ? D 176 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 'POTASSIUM ION' K 5 'COBALT (II) ION' CO # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3CUL _pdbx_initial_refinement_model.details 'PDB entry 3CUL' #