data_3CZC # _entry.id 3CZC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 3CZC RCSB RCSB047395 WWPDB D_1000047395 # _pdbx_database_status.entry_id 3CZC _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-04-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lei, J.' 1 'Su, X.D.' 2 # _citation.id primary _citation.title 'Crystal structures of phosphotransferase system enzymes PtxB (IIB(Asc)) and PtxA (IIA(Asc)) from Streptococcus mutans' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 386 _citation.page_first 465 _citation.page_last 475 _citation.year 2009 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19135450 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2008.12.046 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lei, J.' 1 primary 'Li, L.F.' 2 primary 'Su, X.D.' 3 # _cell.entry_id 3CZC _cell.length_a 36.000 _cell.length_b 41.400 _cell.length_c 54.900 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3CZC _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man RmpB 11908.539 1 2.7.1.69 ? ? ? 2 water nat water 18.015 59 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PTS EII, Putative PTS system, enzyme IIB component' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)AS(MSE)TGGQQ(MSE)GRGSMVKVLTACGNG(MSE)GSS(MSE)VIK(MSE)KVENALRQLGVSDIESASC SVGEAKGLASNYDIVVASNHLIHELDGRTNGKLIGLDNL(MSE)DDNEIKTKLEEALK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMASMTGGQQMGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASNYDIVVASNHLIHE LDGRTNGKLIGLDNLMDDNEIKTKLEEALK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 ALA n 1 6 SER n 1 7 MSE n 1 8 THR n 1 9 GLY n 1 10 GLY n 1 11 GLN n 1 12 GLN n 1 13 MSE n 1 14 GLY n 1 15 ARG n 1 16 GLY n 1 17 SER n 1 18 MET n 1 19 VAL n 1 20 LYS n 1 21 VAL n 1 22 LEU n 1 23 THR n 1 24 ALA n 1 25 CYS n 1 26 GLY n 1 27 ASN n 1 28 GLY n 1 29 MSE n 1 30 GLY n 1 31 SER n 1 32 SER n 1 33 MSE n 1 34 VAL n 1 35 ILE n 1 36 LYS n 1 37 MSE n 1 38 LYS n 1 39 VAL n 1 40 GLU n 1 41 ASN n 1 42 ALA n 1 43 LEU n 1 44 ARG n 1 45 GLN n 1 46 LEU n 1 47 GLY n 1 48 VAL n 1 49 SER n 1 50 ASP n 1 51 ILE n 1 52 GLU n 1 53 SER n 1 54 ALA n 1 55 SER n 1 56 CYS n 1 57 SER n 1 58 VAL n 1 59 GLY n 1 60 GLU n 1 61 ALA n 1 62 LYS n 1 63 GLY n 1 64 LEU n 1 65 ALA n 1 66 SER n 1 67 ASN n 1 68 TYR n 1 69 ASP n 1 70 ILE n 1 71 VAL n 1 72 VAL n 1 73 ALA n 1 74 SER n 1 75 ASN n 1 76 HIS n 1 77 LEU n 1 78 ILE n 1 79 HIS n 1 80 GLU n 1 81 LEU n 1 82 ASP n 1 83 GLY n 1 84 ARG n 1 85 THR n 1 86 ASN n 1 87 GLY n 1 88 LYS n 1 89 LEU n 1 90 ILE n 1 91 GLY n 1 92 LEU n 1 93 ASP n 1 94 ASN n 1 95 LEU n 1 96 MSE n 1 97 ASP n 1 98 ASP n 1 99 ASN n 1 100 GLU n 1 101 ILE n 1 102 LYS n 1 103 THR n 1 104 LYS n 1 105 LEU n 1 106 GLU n 1 107 GLU n 1 108 ALA n 1 109 LEU n 1 110 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ptxB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain UA159 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus mutans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1309 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q93DB0_STRMU _struct_ref.pdbx_db_accession Q93DB0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGEAKGLASNYDIVVASNHLIHELDGRTNGKLIGLDNLMD DNEIKTKLEEALK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3CZC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 18 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 110 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q93DB0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 93 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 93 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3CZC GLY A 1 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -16 1 1 3CZC SER A 2 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -15 2 1 3CZC HIS A 3 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -14 3 1 3CZC MSE A 4 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -13 4 1 3CZC ALA A 5 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -12 5 1 3CZC SER A 6 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -11 6 1 3CZC MSE A 7 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -10 7 1 3CZC THR A 8 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -9 8 1 3CZC GLY A 9 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -8 9 1 3CZC GLY A 10 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -7 10 1 3CZC GLN A 11 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -6 11 1 3CZC GLN A 12 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -5 12 1 3CZC MSE A 13 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -4 13 1 3CZC GLY A 14 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -3 14 1 3CZC ARG A 15 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -2 15 1 3CZC GLY A 16 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' -1 16 1 3CZC SER A 17 ? UNP Q93DB0 ? ? 'EXPRESSION TAG' 0 17 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 3CZC _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 1.717724 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 28.393608 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 289 _exptl_crystal_grow.pdbx_details '0.1M MES, 1.5-1.8M (NH4)2SO4, pH 6.5, Vapor diffusion, temperature 289K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2007-07-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.981 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BSRF BEAMLINE 3W1A' _diffrn_source.pdbx_wavelength_list 0.981 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site BSRF _diffrn_source.pdbx_synchrotron_beamline 3W1A # _reflns.entry_id 3CZC _reflns.d_resolution_high 2.000 _reflns.number_obs 5665 _reflns.pdbx_Rmerge_I_obs 0.025 _reflns.pdbx_netI_over_sigmaI 58.330 _reflns.percent_possible_obs 96.000 _reflns.B_iso_Wilson_estimate 21.478 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.4 _reflns.number_all ? _reflns.pdbx_Rsym_value 0.028 _reflns.pdbx_redundancy 7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.30 _reflns_shell.number_measured_obs 23150 _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs 3265 _reflns_shell.Rmerge_I_obs 0.040 _reflns_shell.meanI_over_sigI_obs 42.2 _reflns_shell.pdbx_Rsym_value 0.038 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_redundancy 7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3265 _reflns_shell.percent_possible_all 89.00 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3CZC _refine.ls_d_res_high 2.020 _refine.ls_d_res_low 19.370 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 100.000 _refine.ls_number_reflns_obs 5401 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_obs 0.17740 _refine.ls_R_factor_R_work 0.17454 _refine.ls_R_factor_R_free 0.23734 _refine.ls_percent_reflns_R_free 4.700 _refine.ls_number_reflns_R_free 264 _refine.B_iso_mean 15.320 _refine.aniso_B[1][1] -0.050 _refine.aniso_B[2][2] -0.070 _refine.aniso_B[3][3] 0.110 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.913 _refine.pdbx_overall_ESU_R 0.203 _refine.pdbx_overall_ESU_R_Free 0.183 _refine.overall_SU_ML 0.120 _refine.overall_SU_B 4.392 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 6711 _refine.ls_R_factor_all 0.23 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 700 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 59 _refine_hist.number_atoms_total 759 _refine_hist.d_res_high 2.020 _refine_hist.d_res_low 19.370 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.022 ? 712 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.594 1.989 ? 946 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.432 5.000 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.739 26.786 ? 28 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.959 15.000 ? 144 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.839 15.000 ? 3 'X-RAY DIFFRACTION' ? r_chiral_restr 0.105 0.200 ? 114 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 503 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.201 0.200 ? 314 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.292 0.200 ? 467 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.285 0.200 ? 43 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.249 0.200 ? 28 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.162 0.200 ? 9 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.277 1.500 ? 481 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.769 2.000 ? 738 'X-RAY DIFFRACTION' ? r_scbond_it 2.990 3.000 ? 245 'X-RAY DIFFRACTION' ? r_scangle_it 4.768 4.500 ? 206 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 2.024 _refine_ls_shell.d_res_low 2.076 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.000 _refine_ls_shell.number_reflns_R_work 358 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.225 _refine_ls_shell.R_factor_R_free 0.350 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 26 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 384 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3CZC _struct.title 'The Crystal Structure of a putative PTS IIB(PtxB) from Streptococcus mutans' _struct.pdbx_descriptor 'RmpB (E.C.2.7.1.69)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3CZC _struct_keywords.text 'alpha/beta sandwich, Phosphotransferase system, Transferase, Transport' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 28 ? LEU A 46 ? GLY A 11 LEU A 29 1 ? 19 HELX_P HELX_P2 2 SER A 57 ? ALA A 65 ? SER A 40 ALA A 48 1 ? 9 HELX_P HELX_P3 3 SER A 66 ? TYR A 68 ? SER A 49 TYR A 51 5 ? 3 HELX_P HELX_P4 4 LEU A 77 ? LEU A 81 ? LEU A 60 LEU A 64 5 ? 5 HELX_P HELX_P5 5 ASP A 97 ? LYS A 110 ? ASP A 80 LYS A 93 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLY 28 C ? ? ? 1_555 A MSE 29 N ? ? A GLY 11 A MSE 12 1_555 ? ? ? ? ? ? ? 1.316 ? covale2 covale ? ? A MSE 29 C ? ? ? 1_555 A GLY 30 N ? ? A MSE 12 A GLY 13 1_555 ? ? ? ? ? ? ? 1.329 ? covale3 covale ? ? A SER 32 C ? ? ? 1_555 A MSE 33 N ? ? A SER 15 A MSE 16 1_555 ? ? ? ? ? ? ? 1.332 ? covale4 covale ? ? A MSE 33 C ? ? ? 1_555 A VAL 34 N ? ? A MSE 16 A VAL 17 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A LYS 36 C ? ? ? 1_555 A MSE 37 N ? ? A LYS 19 A MSE 20 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A MSE 37 C ? ? ? 1_555 A LYS 38 N ? ? A MSE 20 A LYS 21 1_555 ? ? ? ? ? ? ? 1.344 ? covale7 covale ? ? A LEU 95 C ? ? ? 1_555 A MSE 96 N ? ? A LEU 78 A MSE 79 1_555 ? ? ? ? ? ? ? 1.328 ? covale8 covale ? ? A MSE 96 C ? ? ? 1_555 A ASP 97 N ? ? A MSE 79 A ASP 80 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 51 ? CYS A 56 ? ILE A 34 CYS A 39 A 2 VAL A 19 ? ALA A 24 ? VAL A 2 ALA A 7 A 3 ILE A 70 ? SER A 74 ? ILE A 53 SER A 57 A 4 LYS A 88 ? LEU A 92 ? LYS A 71 LEU A 75 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ALA A 54 ? O ALA A 37 N THR A 23 ? N THR A 6 A 2 3 N LEU A 22 ? N LEU A 5 O VAL A 72 ? O VAL A 55 A 3 4 N VAL A 71 ? N VAL A 54 O ILE A 90 ? O ILE A 73 # _atom_sites.entry_id 3CZC _atom_sites.fract_transf_matrix[1][1] 0.027778 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024155 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018215 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -16 ? ? ? A . n A 1 2 SER 2 -15 ? ? ? A . n A 1 3 HIS 3 -14 ? ? ? A . n A 1 4 MSE 4 -13 ? ? ? A . n A 1 5 ALA 5 -12 ? ? ? A . n A 1 6 SER 6 -11 ? ? ? A . n A 1 7 MSE 7 -10 ? ? ? A . n A 1 8 THR 8 -9 ? ? ? A . n A 1 9 GLY 9 -8 ? ? ? A . n A 1 10 GLY 10 -7 ? ? ? A . n A 1 11 GLN 11 -6 ? ? ? A . n A 1 12 GLN 12 -5 ? ? ? A . n A 1 13 MSE 13 -4 ? ? ? A . n A 1 14 GLY 14 -3 ? ? ? A . n A 1 15 ARG 15 -2 ? ? ? A . n A 1 16 GLY 16 -1 ? ? ? A . n A 1 17 SER 17 0 ? ? ? A . n A 1 18 MET 18 1 1 MET MET A . n A 1 19 VAL 19 2 2 VAL VAL A . n A 1 20 LYS 20 3 3 LYS LYS A . n A 1 21 VAL 21 4 4 VAL VAL A . n A 1 22 LEU 22 5 5 LEU LEU A . n A 1 23 THR 23 6 6 THR THR A . n A 1 24 ALA 24 7 7 ALA ALA A . n A 1 25 CYS 25 8 8 CYS CYS A . n A 1 26 GLY 26 9 9 GLY GLY A . n A 1 27 ASN 27 10 10 ASN ASN A . n A 1 28 GLY 28 11 11 GLY GLY A . n A 1 29 MSE 29 12 12 MSE MSE A . n A 1 30 GLY 30 13 13 GLY GLY A . n A 1 31 SER 31 14 14 SER SER A . n A 1 32 SER 32 15 15 SER SER A . n A 1 33 MSE 33 16 16 MSE MSE A . n A 1 34 VAL 34 17 17 VAL VAL A . n A 1 35 ILE 35 18 18 ILE ILE A . n A 1 36 LYS 36 19 19 LYS LYS A . n A 1 37 MSE 37 20 20 MSE MSE A . n A 1 38 LYS 38 21 21 LYS LYS A . n A 1 39 VAL 39 22 22 VAL VAL A . n A 1 40 GLU 40 23 23 GLU GLU A . n A 1 41 ASN 41 24 24 ASN ASN A . n A 1 42 ALA 42 25 25 ALA ALA A . n A 1 43 LEU 43 26 26 LEU LEU A . n A 1 44 ARG 44 27 27 ARG ARG A . n A 1 45 GLN 45 28 28 GLN GLN A . n A 1 46 LEU 46 29 29 LEU LEU A . n A 1 47 GLY 47 30 30 GLY GLY A . n A 1 48 VAL 48 31 31 VAL VAL A . n A 1 49 SER 49 32 32 SER SER A . n A 1 50 ASP 50 33 33 ASP ASP A . n A 1 51 ILE 51 34 34 ILE ILE A . n A 1 52 GLU 52 35 35 GLU GLU A . n A 1 53 SER 53 36 36 SER SER A . n A 1 54 ALA 54 37 37 ALA ALA A . n A 1 55 SER 55 38 38 SER SER A . n A 1 56 CYS 56 39 39 CYS CYS A . n A 1 57 SER 57 40 40 SER SER A . n A 1 58 VAL 58 41 41 VAL VAL A . n A 1 59 GLY 59 42 42 GLY GLY A . n A 1 60 GLU 60 43 43 GLU GLU A . n A 1 61 ALA 61 44 44 ALA ALA A . n A 1 62 LYS 62 45 45 LYS LYS A . n A 1 63 GLY 63 46 46 GLY GLY A . n A 1 64 LEU 64 47 47 LEU LEU A . n A 1 65 ALA 65 48 48 ALA ALA A . n A 1 66 SER 66 49 49 SER SER A . n A 1 67 ASN 67 50 50 ASN ASN A . n A 1 68 TYR 68 51 51 TYR TYR A . n A 1 69 ASP 69 52 52 ASP ASP A . n A 1 70 ILE 70 53 53 ILE ILE A . n A 1 71 VAL 71 54 54 VAL VAL A . n A 1 72 VAL 72 55 55 VAL VAL A . n A 1 73 ALA 73 56 56 ALA ALA A . n A 1 74 SER 74 57 57 SER SER A . n A 1 75 ASN 75 58 58 ASN ASN A . n A 1 76 HIS 76 59 59 HIS HIS A . n A 1 77 LEU 77 60 60 LEU LEU A . n A 1 78 ILE 78 61 61 ILE ILE A . n A 1 79 HIS 79 62 62 HIS HIS A . n A 1 80 GLU 80 63 63 GLU GLU A . n A 1 81 LEU 81 64 64 LEU LEU A . n A 1 82 ASP 82 65 65 ASP ASP A . n A 1 83 GLY 83 66 66 GLY GLY A . n A 1 84 ARG 84 67 67 ARG ARG A . n A 1 85 THR 85 68 68 THR THR A . n A 1 86 ASN 86 69 69 ASN ASN A . n A 1 87 GLY 87 70 70 GLY GLY A . n A 1 88 LYS 88 71 71 LYS LYS A . n A 1 89 LEU 89 72 72 LEU LEU A . n A 1 90 ILE 90 73 73 ILE ILE A . n A 1 91 GLY 91 74 74 GLY GLY A . n A 1 92 LEU 92 75 75 LEU LEU A . n A 1 93 ASP 93 76 76 ASP ASP A . n A 1 94 ASN 94 77 77 ASN ASN A . n A 1 95 LEU 95 78 78 LEU LEU A . n A 1 96 MSE 96 79 79 MSE MSE A . n A 1 97 ASP 97 80 80 ASP ASP A . n A 1 98 ASP 98 81 81 ASP ASP A . n A 1 99 ASN 99 82 82 ASN ASN A . n A 1 100 GLU 100 83 83 GLU GLU A . n A 1 101 ILE 101 84 84 ILE ILE A . n A 1 102 LYS 102 85 85 LYS LYS A . n A 1 103 THR 103 86 86 THR THR A . n A 1 104 LYS 104 87 87 LYS LYS A . n A 1 105 LEU 105 88 88 LEU LEU A . n A 1 106 GLU 106 89 89 GLU GLU A . n A 1 107 GLU 107 90 90 GLU GLU A . n A 1 108 ALA 108 91 91 ALA ALA A . n A 1 109 LEU 109 92 92 LEU LEU A . n A 1 110 LYS 110 93 93 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 94 94 HOH HOH A . B 2 HOH 2 95 95 HOH HOH A . B 2 HOH 3 96 96 HOH HOH A . B 2 HOH 4 97 97 HOH HOH A . B 2 HOH 5 98 98 HOH HOH A . B 2 HOH 6 99 99 HOH HOH A . B 2 HOH 7 100 100 HOH HOH A . B 2 HOH 8 101 101 HOH HOH A . B 2 HOH 9 102 102 HOH HOH A . B 2 HOH 10 103 103 HOH HOH A . B 2 HOH 11 104 104 HOH HOH A . B 2 HOH 12 105 105 HOH HOH A . B 2 HOH 13 106 106 HOH HOH A . B 2 HOH 14 107 107 HOH HOH A . B 2 HOH 15 108 108 HOH HOH A . B 2 HOH 16 109 109 HOH HOH A . B 2 HOH 17 110 110 HOH HOH A . B 2 HOH 18 111 111 HOH HOH A . B 2 HOH 19 112 112 HOH HOH A . B 2 HOH 20 113 113 HOH HOH A . B 2 HOH 21 114 114 HOH HOH A . B 2 HOH 22 115 115 HOH HOH A . B 2 HOH 23 116 116 HOH HOH A . B 2 HOH 24 117 117 HOH HOH A . B 2 HOH 25 118 118 HOH HOH A . B 2 HOH 26 119 119 HOH HOH A . B 2 HOH 27 120 120 HOH HOH A . B 2 HOH 28 121 121 HOH HOH A . B 2 HOH 29 122 122 HOH HOH A . B 2 HOH 30 123 123 HOH HOH A . B 2 HOH 31 124 124 HOH HOH A . B 2 HOH 32 125 125 HOH HOH A . B 2 HOH 33 126 126 HOH HOH A . B 2 HOH 34 127 127 HOH HOH A . B 2 HOH 35 128 128 HOH HOH A . B 2 HOH 36 129 129 HOH HOH A . B 2 HOH 37 130 130 HOH HOH A . B 2 HOH 38 131 131 HOH HOH A . B 2 HOH 39 132 132 HOH HOH A . B 2 HOH 40 133 133 HOH HOH A . B 2 HOH 41 134 134 HOH HOH A . B 2 HOH 42 135 135 HOH HOH A . B 2 HOH 43 136 136 HOH HOH A . B 2 HOH 44 138 138 HOH HOH A . B 2 HOH 45 139 139 HOH HOH A . B 2 HOH 46 140 140 HOH HOH A . B 2 HOH 47 141 141 HOH HOH A . B 2 HOH 48 143 143 HOH HOH A . B 2 HOH 49 144 144 HOH HOH A . B 2 HOH 50 145 145 HOH HOH A . B 2 HOH 51 146 146 HOH HOH A . B 2 HOH 52 147 147 HOH HOH A . B 2 HOH 53 148 148 HOH HOH A . B 2 HOH 54 149 149 HOH HOH A . B 2 HOH 55 150 150 HOH HOH A . B 2 HOH 56 151 151 HOH HOH A . B 2 HOH 57 152 152 HOH HOH A . B 2 HOH 58 153 153 HOH HOH A . B 2 HOH 59 154 154 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 29 A MSE 12 ? MET SELENOMETHIONINE 2 A MSE 33 A MSE 16 ? MET SELENOMETHIONINE 3 A MSE 37 A MSE 20 ? MET SELENOMETHIONINE 4 A MSE 96 A MSE 79 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-03-10 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _phasing.method SAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 PDB_EXTRACT 3.005 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 XDS . ? ? ? ? 'data reduction' ? ? ? 5 XDS . ? ? ? ? 'data scaling' ? ? ? 6 SHELXCD . ? ? ? ? phasing ? ? ? 7 SHELXE . ? ? ? ? 'model building' ? ? ? 8 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 153 ? ? O A HOH 154 ? ? 1.49 2 1 OE1 A GLU 90 ? ? O A HOH 127 ? ? 2.15 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -16 ? A GLY 1 2 1 Y 1 A SER -15 ? A SER 2 3 1 Y 1 A HIS -14 ? A HIS 3 4 1 Y 1 A MSE -13 ? A MSE 4 5 1 Y 1 A ALA -12 ? A ALA 5 6 1 Y 1 A SER -11 ? A SER 6 7 1 Y 1 A MSE -10 ? A MSE 7 8 1 Y 1 A THR -9 ? A THR 8 9 1 Y 1 A GLY -8 ? A GLY 9 10 1 Y 1 A GLY -7 ? A GLY 10 11 1 Y 1 A GLN -6 ? A GLN 11 12 1 Y 1 A GLN -5 ? A GLN 12 13 1 Y 1 A MSE -4 ? A MSE 13 14 1 Y 1 A GLY -3 ? A GLY 14 15 1 Y 1 A ARG -2 ? A ARG 15 16 1 Y 1 A GLY -1 ? A GLY 16 17 1 Y 1 A SER 0 ? A SER 17 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #