data_3D0P # _entry.id 3D0P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3D0P pdb_00003d0p 10.2210/pdb3d0p/pdb NDB PD1139 ? ? RCSB RCSB047444 ? ? WWPDB D_1000047444 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3D0P _pdbx_database_status.recvd_initial_deposition_date 2008-05-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pallan, P.S.' 1 'Egli, M.' 2 # _citation.id primary _citation.title ;Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complex. ; _citation.journal_abbrev 'Cell Cycle' _citation.journal_volume 7 _citation.page_first 2562 _citation.page_last 2569 _citation.year 2008 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1538-4101 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18719385 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pallan, P.S.' 1 ? primary 'Egli, M.' 2 ? # _cell.entry_id 3D0P _cell.length_a 98.397 _cell.length_b 66.660 _cell.length_c 76.926 _cell.angle_alpha 90.00 _cell.angle_beta 122.31 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3D0P _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Ribonuclease H' 15429.371 2 3.1.26.4 D132N ? ? 2 polymer syn ;DNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DCP*DG)-3') ; 3663.392 2 ? ? ? 'Dickerson dodecamer' 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 water nat water 18.015 166 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RNase H' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;EEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWV KDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYG ; ;EEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSNSQTAIKWV KDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYG ; A,C ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DC)(DG)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DG)' CGCGAATTCGCG B,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 GLU n 1 3 ILE n 1 4 ILE n 1 5 TRP n 1 6 GLU n 1 7 SER n 1 8 LEU n 1 9 SER n 1 10 VAL n 1 11 ASP n 1 12 VAL n 1 13 GLY n 1 14 SER n 1 15 GLN n 1 16 GLY n 1 17 ASN n 1 18 PRO n 1 19 GLY n 1 20 ILE n 1 21 VAL n 1 22 GLU n 1 23 TYR n 1 24 LYS n 1 25 GLY n 1 26 VAL n 1 27 ASP n 1 28 THR n 1 29 LYS n 1 30 THR n 1 31 GLY n 1 32 GLU n 1 33 VAL n 1 34 LEU n 1 35 PHE n 1 36 GLU n 1 37 ARG n 1 38 GLU n 1 39 PRO n 1 40 ILE n 1 41 PRO n 1 42 ILE n 1 43 GLY n 1 44 THR n 1 45 ASN n 1 46 ASN n 1 47 MET n 1 48 GLY n 1 49 GLU n 1 50 PHE n 1 51 LEU n 1 52 ALA n 1 53 ILE n 1 54 VAL n 1 55 HIS n 1 56 GLY n 1 57 LEU n 1 58 ARG n 1 59 TYR n 1 60 LEU n 1 61 LYS n 1 62 GLU n 1 63 ARG n 1 64 ASN n 1 65 SER n 1 66 ARG n 1 67 LYS n 1 68 PRO n 1 69 ILE n 1 70 TYR n 1 71 SER n 1 72 ASN n 1 73 SER n 1 74 GLN n 1 75 THR n 1 76 ALA n 1 77 ILE n 1 78 LYS n 1 79 TRP n 1 80 VAL n 1 81 LYS n 1 82 ASP n 1 83 LYS n 1 84 LYS n 1 85 ALA n 1 86 LYS n 1 87 SER n 1 88 THR n 1 89 LEU n 1 90 VAL n 1 91 ARG n 1 92 ASN n 1 93 GLU n 1 94 GLU n 1 95 THR n 1 96 ALA n 1 97 LEU n 1 98 ILE n 1 99 TRP n 1 100 LYS n 1 101 LEU n 1 102 VAL n 1 103 ASP n 1 104 GLU n 1 105 ALA n 1 106 GLU n 1 107 GLU n 1 108 TRP n 1 109 LEU n 1 110 ASN n 1 111 THR n 1 112 HIS n 1 113 THR n 1 114 TYR n 1 115 GLU n 1 116 THR n 1 117 PRO n 1 118 ILE n 1 119 LEU n 1 120 LYS n 1 121 TRP n 1 122 GLN n 1 123 THR n 1 124 ASP n 1 125 LYS n 1 126 TRP n 1 127 GLY n 1 128 GLU n 1 129 ILE n 1 130 LYS n 1 131 ALA n 1 132 ASP n 1 133 TYR n 1 134 GLY n 2 1 DC n 2 2 DG n 2 3 DC n 2 4 DG n 2 5 DA n 2 6 DA n 2 7 DT n 2 8 DT n 2 9 DC n 2 10 DG n 2 11 DC n 2 12 DG n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'Bacillus halodurans RNase H, D132N mutant' 2 1 sample ? ? ? ? ? 'Synthetic DNA' # loop_ _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.db_code _struct_ref.db_name _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 2 3D0P 3D0P PDB 1 1 CGCGAATTCGCG ? 1 Q9KEI9 RNH1_BACHD UNP 2 61 ;EEIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFLAIVHGLRYLKERNSRKPIYSDSQTAIKWV KDKKAKSTLVRNEETALIWKLVDEAEEWLNTHTYETPILKWQTDKWGEIKADYG ; ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3D0P B 1 ? 12 ? 3D0P 1 ? 12 ? 1 12 2 1 3D0P D 1 ? 12 ? 3D0P 1 ? 12 ? 1 12 3 2 3D0P A 1 ? 134 ? Q9KEI9 61 ? 194 ? 61 194 4 2 3D0P C 1 ? 134 ? Q9KEI9 61 ? 194 ? 61 194 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 3 3D0P ASN A 72 ? UNP Q9KEI9 ASP 132 'engineered mutation' 132 1 4 3D0P ASN C 72 ? UNP Q9KEI9 ASP 132 'engineered mutation' 132 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3D0P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.79 _exptl_crystal.density_percent_sol 55.94 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '0.1 M sodium acetate, 8 % (w/v) PEG 4000, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'sodium acetate' ? ? ? 1 2 1 'PEG 4000' ? ? ? 1 3 2 'sodium acetate' ? ? ? 1 4 2 'PEG 4000' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2007-10-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'C(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97850 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97850 # _reflns.entry_id 3D0P _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.80 _reflns.d_resolution_low 50.00 _reflns.number_all 38816 _reflns.number_obs 37768 _reflns.percent_possible_obs 97.3 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 94.7 _reflns_shell.Rmerge_I_obs 0.248 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 12.4 _reflns_shell.pdbx_redundancy 7.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3643 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 3D0P _refine.ls_number_reflns_obs 35877 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.59 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 99.99 _refine.ls_R_factor_obs 0.21539 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21396 _refine.ls_R_factor_R_free 0.24108 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1886 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.961 _refine.correlation_coeff_Fo_to_Fc_free 0.951 _refine.B_iso_mean 31.474 _refine.aniso_B[1][1] -1.44 _refine.aniso_B[2][2] -1.40 _refine.aniso_B[3][3] 1.32 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.42 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1ZBI, using one protein molecule.' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.133 _refine.pdbx_overall_ESU_R_Free 0.124 _refine.overall_SU_ML 0.086 _refine.overall_SU_B 5.491 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2169 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 166 _refine_hist.number_atoms_total 2822 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 41.59 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 2763 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.672 2.175 ? 3844 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.925 5.000 ? 265 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.558 25.146 ? 103 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.627 15.000 ? 406 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.274 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.120 0.200 ? 421 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.021 ? 1906 'X-RAY DIFFRACTION' ? r_mcbond_it 1.042 1.500 ? 1323 'X-RAY DIFFRACTION' ? r_mcangle_it 1.862 2.000 ? 2148 'X-RAY DIFFRACTION' ? r_scbond_it 2.448 3.000 ? 1440 'X-RAY DIFFRACTION' ? r_scangle_it 3.633 4.500 ? 1696 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.803 _refine_ls_shell.d_res_low 1.849 _refine_ls_shell.number_reflns_R_work 2515 _refine_ls_shell.R_factor_R_work 0.256 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.285 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 120 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 2515 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3D0P _struct.title ;Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complex ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3D0P _struct_keywords.pdbx_keywords hydrolase/DNA _struct_keywords.text ;RNase H-DNA complex, A-form, B-form, metal ions, protein-DNA complex, Cytoplasm, Endonuclease, Hydrolase, Magnesium, Manganese, Metal-binding, Nuclease, hydrolase-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? # loop_ _struct_biol.id _struct_biol.details 1 ;The second part of the biological assembly is generated by the two fold axis of Chain identifier A: -X, Y, -Z -1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -1.000000 ; 2 ;The second part of the biological assembly is generated by the two fold axis of Chain identifier B: -X, Y, -Z -1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -1.000000 ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 44 ? ARG A 63 ? THR A 104 ARG A 123 1 ? 20 HELX_P HELX_P2 2 SER A 73 ? LYS A 83 ? SER A 133 LYS A 143 1 ? 11 HELX_P HELX_P3 3 ASN A 92 ? GLU A 94 ? ASN A 152 GLU A 154 5 ? 3 HELX_P HELX_P4 4 THR A 95 ? HIS A 112 ? THR A 155 HIS A 172 1 ? 18 HELX_P HELX_P5 5 GLN A 122 ? GLY A 127 ? GLN A 182 GLY A 187 1 ? 6 HELX_P HELX_P6 6 THR C 44 ? ARG C 63 ? THR C 104 ARG C 123 1 ? 20 HELX_P HELX_P7 7 SER C 73 ? LYS C 83 ? SER C 133 LYS C 143 1 ? 11 HELX_P HELX_P8 8 THR C 95 ? HIS C 112 ? THR C 155 HIS C 172 1 ? 18 HELX_P HELX_P9 9 GLN C 122 ? GLY C 127 ? GLN C 182 GLY C 187 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? C NA 1 C HOH 262 1_555 ? ? ? ? ? ? ? 2.199 ? ? metalc2 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? C NA 1 C HOH 266 1_555 ? ? ? ? ? ? ? 2.361 ? ? metalc3 metalc ? ? E NA . NA ? ? ? 1_555 H HOH . O ? ? C NA 1 C HOH 285 1_555 ? ? ? ? ? ? ? 2.445 ? ? hydrog1 hydrog ? ? D DC 1 N3 ? ? ? 1_555 D DG 12 N1 ? ? D DC 1 D DG 12 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? D DC 1 N4 ? ? ? 1_555 D DG 12 O6 ? ? D DC 1 D DG 12 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? D DC 1 O2 ? ? ? 1_555 D DG 12 N2 ? ? D DC 1 D DG 12 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? D DG 2 N1 ? ? ? 1_555 D DC 11 N3 ? ? D DG 2 D DC 11 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? D DG 2 N2 ? ? ? 1_555 D DC 11 O2 ? ? D DG 2 D DC 11 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? D DG 2 O6 ? ? ? 1_555 D DC 11 N4 ? ? D DG 2 D DC 11 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? D DC 3 N3 ? ? ? 1_555 D DG 10 N1 ? ? D DC 3 D DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? D DC 3 N4 ? ? ? 1_555 D DG 10 O6 ? ? D DC 3 D DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? D DC 3 O2 ? ? ? 1_555 D DG 10 N2 ? ? D DC 3 D DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? D DG 4 N1 ? ? ? 1_555 D DC 9 N3 ? ? D DG 4 D DC 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? D DG 4 N2 ? ? ? 1_555 D DC 9 O2 ? ? D DG 4 D DC 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? D DG 4 O6 ? ? ? 1_555 D DC 9 N4 ? ? D DG 4 D DC 9 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? D DA 5 N1 ? ? ? 1_555 D DT 8 N3 ? ? D DA 5 D DT 8 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? D DA 5 N6 ? ? ? 1_555 D DT 8 O4 ? ? D DA 5 D DT 8 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? D DA 6 N1 ? ? ? 1_555 D DT 7 N3 ? ? D DA 6 D DT 7 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? D DA 6 N6 ? ? ? 1_555 D DT 7 O4 ? ? D DA 6 D DT 7 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? D DT 7 N3 ? ? ? 1_555 D DA 6 N1 ? ? D DT 7 D DA 6 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? D DT 7 O4 ? ? ? 1_555 D DA 6 N6 ? ? D DT 7 D DA 6 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? D DT 8 N3 ? ? ? 1_555 D DA 5 N1 ? ? D DT 8 D DA 5 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? D DT 8 O4 ? ? ? 1_555 D DA 5 N6 ? ? D DT 8 D DA 5 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? D DC 9 N3 ? ? ? 1_555 D DG 4 N1 ? ? D DC 9 D DG 4 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? D DC 9 N4 ? ? ? 1_555 D DG 4 O6 ? ? D DC 9 D DG 4 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? D DC 9 O2 ? ? ? 1_555 D DG 4 N2 ? ? D DC 9 D DG 4 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? D DG 10 N1 ? ? ? 1_555 D DC 3 N3 ? ? D DG 10 D DC 3 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? D DG 10 N2 ? ? ? 1_555 D DC 3 O2 ? ? D DG 10 D DC 3 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? D DG 10 O6 ? ? ? 1_555 D DC 3 N4 ? ? D DG 10 D DC 3 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? D DC 11 N3 ? ? ? 1_555 D DG 2 N1 ? ? D DC 11 D DG 2 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? D DC 11 N4 ? ? ? 1_555 D DG 2 O6 ? ? D DC 11 D DG 2 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? D DC 11 O2 ? ? ? 1_555 D DG 2 N2 ? ? D DC 11 D DG 2 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? D DG 12 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 12 D DC 1 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? D DG 12 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 12 D DC 1 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D DG 12 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 12 D DC 1 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLU 1 A . ? GLU 61 A GLU 2 A ? GLU 62 A 1 -2.92 2 ASN 17 A . ? ASN 77 A PRO 18 A ? PRO 78 A 1 2.87 3 ASN 17 C . ? ASN 77 C PRO 18 C ? PRO 78 C 1 3.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 33 ? GLY A 43 ? VAL A 93 GLY A 103 A 2 GLY A 19 ? ASP A 27 ? GLY A 79 ASP A 87 A 3 LEU A 8 ? SER A 14 ? LEU A 68 SER A 74 A 4 ILE A 69 ? SER A 71 ? ILE A 129 SER A 131 A 5 ILE A 118 ? LYS A 120 ? ILE A 178 LYS A 180 B 1 VAL C 33 ? GLY C 43 ? VAL C 93 GLY C 103 B 2 GLY C 19 ? ASP C 27 ? GLY C 79 ASP C 87 B 3 LEU C 8 ? SER C 14 ? LEU C 68 SER C 74 B 4 ILE C 69 ? SER C 71 ? ILE C 129 SER C 131 B 5 ILE C 118 ? LYS C 120 ? ILE C 178 LYS C 180 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 40 ? O ILE A 100 N VAL A 21 ? N VAL A 81 A 2 3 O VAL A 26 ? O VAL A 86 N SER A 9 ? N SER A 69 A 3 4 N LEU A 8 ? N LEU A 68 O TYR A 70 ? O TYR A 130 A 4 5 N ILE A 69 ? N ILE A 129 O LEU A 119 ? O LEU A 179 B 1 2 O ARG C 37 ? O ARG C 97 N TYR C 23 ? N TYR C 83 B 2 3 O VAL C 26 ? O VAL C 86 N SER C 9 ? N SER C 69 B 3 4 N LEU C 8 ? N LEU C 68 O TYR C 70 ? O TYR C 130 B 4 5 N ILE C 69 ? N ILE C 129 O LEU C 119 ? O LEU C 179 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id C _struct_site.pdbx_auth_comp_id NA _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE NA C 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 LEU C 51 ? LEU C 111 . ? 1_555 ? 2 AC1 4 HOH H . ? HOH C 262 . ? 1_555 ? 3 AC1 4 HOH H . ? HOH C 266 . ? 1_555 ? 4 AC1 4 HOH H . ? HOH C 285 . ? 1_555 ? # _database_PDB_matrix.entry_id 3D0P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3D0P _atom_sites.fract_transf_matrix[1][1] 0.010163 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006427 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015002 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015381 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 61 61 GLU GLU A . n A 1 2 GLU 2 62 62 GLU GLU A . n A 1 3 ILE 3 63 63 ILE ILE A . n A 1 4 ILE 4 64 64 ILE ILE A . n A 1 5 TRP 5 65 65 TRP TRP A . n A 1 6 GLU 6 66 66 GLU GLU A . n A 1 7 SER 7 67 67 SER SER A . n A 1 8 LEU 8 68 68 LEU LEU A . n A 1 9 SER 9 69 69 SER SER A . n A 1 10 VAL 10 70 70 VAL VAL A . n A 1 11 ASP 11 71 71 ASP ASP A . n A 1 12 VAL 12 72 72 VAL VAL A . n A 1 13 GLY 13 73 73 GLY GLY A . n A 1 14 SER 14 74 74 SER SER A . n A 1 15 GLN 15 75 75 GLN GLN A . n A 1 16 GLY 16 76 76 GLY GLY A . n A 1 17 ASN 17 77 77 ASN ASN A . n A 1 18 PRO 18 78 78 PRO PRO A . n A 1 19 GLY 19 79 79 GLY GLY A . n A 1 20 ILE 20 80 80 ILE ILE A . n A 1 21 VAL 21 81 81 VAL VAL A . n A 1 22 GLU 22 82 82 GLU GLU A . n A 1 23 TYR 23 83 83 TYR TYR A . n A 1 24 LYS 24 84 84 LYS LYS A . n A 1 25 GLY 25 85 85 GLY GLY A . n A 1 26 VAL 26 86 86 VAL VAL A . n A 1 27 ASP 27 87 87 ASP ASP A . n A 1 28 THR 28 88 88 THR THR A . n A 1 29 LYS 29 89 89 LYS LYS A . n A 1 30 THR 30 90 90 THR THR A . n A 1 31 GLY 31 91 91 GLY GLY A . n A 1 32 GLU 32 92 92 GLU GLU A . n A 1 33 VAL 33 93 93 VAL VAL A . n A 1 34 LEU 34 94 94 LEU LEU A . n A 1 35 PHE 35 95 95 PHE PHE A . n A 1 36 GLU 36 96 96 GLU GLU A . n A 1 37 ARG 37 97 97 ARG ARG A . n A 1 38 GLU 38 98 98 GLU GLU A . n A 1 39 PRO 39 99 99 PRO PRO A . n A 1 40 ILE 40 100 100 ILE ILE A . n A 1 41 PRO 41 101 101 PRO PRO A . n A 1 42 ILE 42 102 102 ILE ILE A . n A 1 43 GLY 43 103 103 GLY GLY A . n A 1 44 THR 44 104 104 THR THR A . n A 1 45 ASN 45 105 105 ASN ASN A . n A 1 46 ASN 46 106 106 ASN ASN A . n A 1 47 MET 47 107 107 MET MET A . n A 1 48 GLY 48 108 108 GLY GLY A . n A 1 49 GLU 49 109 109 GLU GLU A . n A 1 50 PHE 50 110 110 PHE PHE A . n A 1 51 LEU 51 111 111 LEU LEU A . n A 1 52 ALA 52 112 112 ALA ALA A . n A 1 53 ILE 53 113 113 ILE ILE A . n A 1 54 VAL 54 114 114 VAL VAL A . n A 1 55 HIS 55 115 115 HIS HIS A . n A 1 56 GLY 56 116 116 GLY GLY A . n A 1 57 LEU 57 117 117 LEU LEU A . n A 1 58 ARG 58 118 118 ARG ARG A . n A 1 59 TYR 59 119 119 TYR TYR A . n A 1 60 LEU 60 120 120 LEU LEU A . n A 1 61 LYS 61 121 121 LYS LYS A . n A 1 62 GLU 62 122 122 GLU GLU A . n A 1 63 ARG 63 123 123 ARG ARG A . n A 1 64 ASN 64 124 124 ASN ASN A . n A 1 65 SER 65 125 125 SER SER A . n A 1 66 ARG 66 126 126 ARG ARG A . n A 1 67 LYS 67 127 127 LYS LYS A . n A 1 68 PRO 68 128 128 PRO PRO A . n A 1 69 ILE 69 129 129 ILE ILE A . n A 1 70 TYR 70 130 130 TYR TYR A . n A 1 71 SER 71 131 131 SER SER A . n A 1 72 ASN 72 132 132 ASN ASN A . n A 1 73 SER 73 133 133 SER SER A . n A 1 74 GLN 74 134 134 GLN GLN A . n A 1 75 THR 75 135 135 THR THR A . n A 1 76 ALA 76 136 136 ALA ALA A . n A 1 77 ILE 77 137 137 ILE ILE A . n A 1 78 LYS 78 138 138 LYS LYS A . n A 1 79 TRP 79 139 139 TRP TRP A . n A 1 80 VAL 80 140 140 VAL VAL A . n A 1 81 LYS 81 141 141 LYS LYS A . n A 1 82 ASP 82 142 142 ASP ASP A . n A 1 83 LYS 83 143 143 LYS LYS A . n A 1 84 LYS 84 144 144 LYS LYS A . n A 1 85 ALA 85 145 145 ALA ALA A . n A 1 86 LYS 86 146 146 LYS LYS A . n A 1 87 SER 87 147 147 SER SER A . n A 1 88 THR 88 148 148 THR THR A . n A 1 89 LEU 89 149 149 LEU LEU A . n A 1 90 VAL 90 150 150 VAL VAL A . n A 1 91 ARG 91 151 151 ARG ARG A . n A 1 92 ASN 92 152 152 ASN ASN A . n A 1 93 GLU 93 153 153 GLU GLU A . n A 1 94 GLU 94 154 154 GLU GLU A . n A 1 95 THR 95 155 155 THR THR A . n A 1 96 ALA 96 156 156 ALA ALA A . n A 1 97 LEU 97 157 157 LEU LEU A . n A 1 98 ILE 98 158 158 ILE ILE A . n A 1 99 TRP 99 159 159 TRP TRP A . n A 1 100 LYS 100 160 160 LYS LYS A . n A 1 101 LEU 101 161 161 LEU LEU A . n A 1 102 VAL 102 162 162 VAL VAL A . n A 1 103 ASP 103 163 163 ASP ASP A . n A 1 104 GLU 104 164 164 GLU GLU A . n A 1 105 ALA 105 165 165 ALA ALA A . n A 1 106 GLU 106 166 166 GLU GLU A . n A 1 107 GLU 107 167 167 GLU GLU A . n A 1 108 TRP 108 168 168 TRP TRP A . n A 1 109 LEU 109 169 169 LEU LEU A . n A 1 110 ASN 110 170 170 ASN ASN A . n A 1 111 THR 111 171 171 THR THR A . n A 1 112 HIS 112 172 172 HIS HIS A . n A 1 113 THR 113 173 173 THR THR A . n A 1 114 TYR 114 174 174 TYR TYR A . n A 1 115 GLU 115 175 175 GLU GLU A . n A 1 116 THR 116 176 176 THR THR A . n A 1 117 PRO 117 177 177 PRO PRO A . n A 1 118 ILE 118 178 178 ILE ILE A . n A 1 119 LEU 119 179 179 LEU LEU A . n A 1 120 LYS 120 180 180 LYS LYS A . n A 1 121 TRP 121 181 181 TRP TRP A . n A 1 122 GLN 122 182 182 GLN GLN A . n A 1 123 THR 123 183 183 THR THR A . n A 1 124 ASP 124 184 184 ASP ASP A . n A 1 125 LYS 125 185 185 LYS LYS A . n A 1 126 TRP 126 186 186 TRP TRP A . n A 1 127 GLY 127 187 187 GLY GLY A . n A 1 128 GLU 128 188 188 GLU GLU A . n A 1 129 ILE 129 189 189 ILE ILE A . n A 1 130 LYS 130 190 190 LYS LYS A . n A 1 131 ALA 131 191 191 ALA ALA A . n A 1 132 ASP 132 192 192 ASP ASP A . n A 1 133 TYR 133 193 193 TYR TYR A . n A 1 134 GLY 134 194 194 GLY GLY A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DG 2 2 2 DG DG B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DG 4 4 4 DG DG B . n B 2 5 DA 5 5 5 DA DA B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DT 7 7 7 DT DT B . n B 2 8 DT 8 8 8 DT DT B . n B 2 9 DC 9 9 9 DC DC B . n B 2 10 DG 10 10 10 DG DG B . n B 2 11 DC 11 11 11 DC DC B . n B 2 12 DG 12 12 12 DG DG B . n C 1 1 GLU 1 61 ? ? ? C . n C 1 2 GLU 2 62 62 GLU GLU C . n C 1 3 ILE 3 63 63 ILE ILE C . n C 1 4 ILE 4 64 64 ILE ILE C . n C 1 5 TRP 5 65 65 TRP TRP C . n C 1 6 GLU 6 66 66 GLU GLU C . n C 1 7 SER 7 67 67 SER SER C . n C 1 8 LEU 8 68 68 LEU LEU C . n C 1 9 SER 9 69 69 SER SER C . n C 1 10 VAL 10 70 70 VAL VAL C . n C 1 11 ASP 11 71 71 ASP ASP C . n C 1 12 VAL 12 72 72 VAL VAL C . n C 1 13 GLY 13 73 73 GLY GLY C . n C 1 14 SER 14 74 74 SER SER C . n C 1 15 GLN 15 75 75 GLN GLN C . n C 1 16 GLY 16 76 76 GLY GLY C . n C 1 17 ASN 17 77 77 ASN ASN C . n C 1 18 PRO 18 78 78 PRO PRO C . n C 1 19 GLY 19 79 79 GLY GLY C . n C 1 20 ILE 20 80 80 ILE ILE C . n C 1 21 VAL 21 81 81 VAL VAL C . n C 1 22 GLU 22 82 82 GLU GLU C . n C 1 23 TYR 23 83 83 TYR TYR C . n C 1 24 LYS 24 84 84 LYS LYS C . n C 1 25 GLY 25 85 85 GLY GLY C . n C 1 26 VAL 26 86 86 VAL VAL C . n C 1 27 ASP 27 87 87 ASP ASP C . n C 1 28 THR 28 88 88 THR THR C . n C 1 29 LYS 29 89 89 LYS LYS C . n C 1 30 THR 30 90 90 THR THR C . n C 1 31 GLY 31 91 91 GLY GLY C . n C 1 32 GLU 32 92 92 GLU GLU C . n C 1 33 VAL 33 93 93 VAL VAL C . n C 1 34 LEU 34 94 94 LEU LEU C . n C 1 35 PHE 35 95 95 PHE PHE C . n C 1 36 GLU 36 96 96 GLU GLU C . n C 1 37 ARG 37 97 97 ARG ARG C . n C 1 38 GLU 38 98 98 GLU GLU C . n C 1 39 PRO 39 99 99 PRO PRO C . n C 1 40 ILE 40 100 100 ILE ILE C . n C 1 41 PRO 41 101 101 PRO PRO C . n C 1 42 ILE 42 102 102 ILE ILE C . n C 1 43 GLY 43 103 103 GLY GLY C . n C 1 44 THR 44 104 104 THR THR C . n C 1 45 ASN 45 105 105 ASN ASN C . n C 1 46 ASN 46 106 106 ASN ASN C . n C 1 47 MET 47 107 107 MET MET C . n C 1 48 GLY 48 108 108 GLY GLY C . n C 1 49 GLU 49 109 109 GLU GLU C . n C 1 50 PHE 50 110 110 PHE PHE C . n C 1 51 LEU 51 111 111 LEU LEU C . n C 1 52 ALA 52 112 112 ALA ALA C . n C 1 53 ILE 53 113 113 ILE ILE C . n C 1 54 VAL 54 114 114 VAL VAL C . n C 1 55 HIS 55 115 115 HIS HIS C . n C 1 56 GLY 56 116 116 GLY GLY C . n C 1 57 LEU 57 117 117 LEU LEU C . n C 1 58 ARG 58 118 118 ARG ARG C . n C 1 59 TYR 59 119 119 TYR TYR C . n C 1 60 LEU 60 120 120 LEU LEU C . n C 1 61 LYS 61 121 121 LYS LYS C . n C 1 62 GLU 62 122 122 GLU GLU C . n C 1 63 ARG 63 123 123 ARG ARG C . n C 1 64 ASN 64 124 124 ASN ASN C . n C 1 65 SER 65 125 125 SER SER C . n C 1 66 ARG 66 126 126 ARG ARG C . n C 1 67 LYS 67 127 127 LYS LYS C . n C 1 68 PRO 68 128 128 PRO PRO C . n C 1 69 ILE 69 129 129 ILE ILE C . n C 1 70 TYR 70 130 130 TYR TYR C . n C 1 71 SER 71 131 131 SER SER C . n C 1 72 ASN 72 132 132 ASN ASN C . n C 1 73 SER 73 133 133 SER SER C . n C 1 74 GLN 74 134 134 GLN GLN C . n C 1 75 THR 75 135 135 THR THR C . n C 1 76 ALA 76 136 136 ALA ALA C . n C 1 77 ILE 77 137 137 ILE ILE C . n C 1 78 LYS 78 138 138 LYS LYS C . n C 1 79 TRP 79 139 139 TRP TRP C . n C 1 80 VAL 80 140 140 VAL VAL C . n C 1 81 LYS 81 141 141 LYS LYS C . n C 1 82 ASP 82 142 142 ASP ASP C . n C 1 83 LYS 83 143 143 LYS LYS C . n C 1 84 LYS 84 144 144 LYS LYS C . n C 1 85 ALA 85 145 145 ALA ALA C . n C 1 86 LYS 86 146 146 LYS LYS C . n C 1 87 SER 87 147 147 SER SER C . n C 1 88 THR 88 148 148 THR THR C . n C 1 89 LEU 89 149 149 LEU LEU C . n C 1 90 VAL 90 150 150 VAL VAL C . n C 1 91 ARG 91 151 151 ARG ARG C . n C 1 92 ASN 92 152 152 ASN ASN C . n C 1 93 GLU 93 153 153 GLU GLU C . n C 1 94 GLU 94 154 154 GLU GLU C . n C 1 95 THR 95 155 155 THR THR C . n C 1 96 ALA 96 156 156 ALA ALA C . n C 1 97 LEU 97 157 157 LEU LEU C . n C 1 98 ILE 98 158 158 ILE ILE C . n C 1 99 TRP 99 159 159 TRP TRP C . n C 1 100 LYS 100 160 160 LYS LYS C . n C 1 101 LEU 101 161 161 LEU LEU C . n C 1 102 VAL 102 162 162 VAL VAL C . n C 1 103 ASP 103 163 163 ASP ASP C . n C 1 104 GLU 104 164 164 GLU GLU C . n C 1 105 ALA 105 165 165 ALA ALA C . n C 1 106 GLU 106 166 166 GLU GLU C . n C 1 107 GLU 107 167 167 GLU GLU C . n C 1 108 TRP 108 168 168 TRP TRP C . n C 1 109 LEU 109 169 169 LEU LEU C . n C 1 110 ASN 110 170 170 ASN ASN C . n C 1 111 THR 111 171 171 THR THR C . n C 1 112 HIS 112 172 172 HIS HIS C . n C 1 113 THR 113 173 173 THR THR C . n C 1 114 TYR 114 174 174 TYR TYR C . n C 1 115 GLU 115 175 175 GLU GLU C . n C 1 116 THR 116 176 176 THR THR C . n C 1 117 PRO 117 177 177 PRO PRO C . n C 1 118 ILE 118 178 178 ILE ILE C . n C 1 119 LEU 119 179 179 LEU LEU C . n C 1 120 LYS 120 180 180 LYS LYS C . n C 1 121 TRP 121 181 181 TRP TRP C . n C 1 122 GLN 122 182 182 GLN GLN C . n C 1 123 THR 123 183 183 THR THR C . n C 1 124 ASP 124 184 184 ASP ASP C . n C 1 125 LYS 125 185 185 LYS LYS C . n C 1 126 TRP 126 186 186 TRP TRP C . n C 1 127 GLY 127 187 187 GLY GLY C . n C 1 128 GLU 128 188 188 GLU GLU C . n C 1 129 ILE 129 189 189 ILE ILE C . n C 1 130 LYS 130 190 190 LYS LYS C . n C 1 131 ALA 131 191 191 ALA ALA C . n C 1 132 ASP 132 192 192 ASP ASP C . n C 1 133 TYR 133 193 193 TYR TYR C . n C 1 134 GLY 134 194 194 GLY GLY C . n D 2 1 DC 1 1 1 DC DC D . n D 2 2 DG 2 2 2 DG DG D . n D 2 3 DC 3 3 3 DC DC D . n D 2 4 DG 4 4 4 DG DG D . n D 2 5 DA 5 5 5 DA DA D . n D 2 6 DA 6 6 6 DA DA D . n D 2 7 DT 7 7 7 DT DT D . n D 2 8 DT 8 8 8 DT DT D . n D 2 9 DC 9 9 9 DC DC D . n D 2 10 DG 10 10 10 DG DG D . n D 2 11 DC 11 11 11 DC DC D . n D 2 12 DG 12 12 12 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NA 1 1 1 NA NA C . F 4 HOH 1 195 195 HOH HOH A . F 4 HOH 2 196 196 HOH HOH A . F 4 HOH 3 197 197 HOH HOH A . F 4 HOH 4 198 198 HOH HOH A . F 4 HOH 5 199 199 HOH HOH A . F 4 HOH 6 200 200 HOH HOH A . F 4 HOH 7 201 201 HOH HOH A . F 4 HOH 8 202 202 HOH HOH A . F 4 HOH 9 203 203 HOH HOH A . F 4 HOH 10 204 204 HOH HOH A . F 4 HOH 11 205 205 HOH HOH A . F 4 HOH 12 206 206 HOH HOH A . F 4 HOH 13 207 207 HOH HOH A . F 4 HOH 14 208 208 HOH HOH A . F 4 HOH 15 209 209 HOH HOH A . F 4 HOH 16 210 210 HOH HOH A . F 4 HOH 17 211 211 HOH HOH A . F 4 HOH 18 212 212 HOH HOH A . F 4 HOH 19 213 213 HOH HOH A . F 4 HOH 20 214 214 HOH HOH A . F 4 HOH 21 215 215 HOH HOH A . F 4 HOH 22 216 216 HOH HOH A . F 4 HOH 23 217 217 HOH HOH A . F 4 HOH 24 218 218 HOH HOH A . F 4 HOH 25 219 219 HOH HOH A . F 4 HOH 26 220 220 HOH HOH A . F 4 HOH 27 221 221 HOH HOH A . F 4 HOH 28 222 222 HOH HOH A . F 4 HOH 29 223 223 HOH HOH A . F 4 HOH 30 224 224 HOH HOH A . F 4 HOH 31 225 225 HOH HOH A . F 4 HOH 32 226 226 HOH HOH A . F 4 HOH 33 227 227 HOH HOH A . F 4 HOH 34 228 228 HOH HOH A . F 4 HOH 35 229 229 HOH HOH A . F 4 HOH 36 230 230 HOH HOH A . F 4 HOH 37 231 231 HOH HOH A . F 4 HOH 38 232 232 HOH HOH A . F 4 HOH 39 233 233 HOH HOH A . F 4 HOH 40 234 234 HOH HOH A . F 4 HOH 41 235 235 HOH HOH A . F 4 HOH 42 236 236 HOH HOH A . F 4 HOH 43 237 237 HOH HOH A . F 4 HOH 44 238 238 HOH HOH A . F 4 HOH 45 239 239 HOH HOH A . F 4 HOH 46 240 240 HOH HOH A . F 4 HOH 47 241 241 HOH HOH A . F 4 HOH 48 242 242 HOH HOH A . F 4 HOH 49 243 243 HOH HOH A . F 4 HOH 50 244 244 HOH HOH A . F 4 HOH 51 245 245 HOH HOH A . F 4 HOH 52 246 246 HOH HOH A . F 4 HOH 53 247 247 HOH HOH A . F 4 HOH 54 248 248 HOH HOH A . F 4 HOH 55 249 249 HOH HOH A . F 4 HOH 56 250 250 HOH HOH A . F 4 HOH 57 251 251 HOH HOH A . F 4 HOH 58 252 252 HOH HOH A . F 4 HOH 59 254 254 HOH HOH A . G 4 HOH 1 17 17 HOH HOH B . G 4 HOH 2 25 25 HOH HOH B . G 4 HOH 3 41 41 HOH HOH B . G 4 HOH 4 62 62 HOH HOH B . G 4 HOH 5 72 72 HOH HOH B . G 4 HOH 6 73 73 HOH HOH B . G 4 HOH 7 74 74 HOH HOH B . G 4 HOH 8 77 77 HOH HOH B . G 4 HOH 9 79 79 HOH HOH B . G 4 HOH 10 85 85 HOH HOH B . G 4 HOH 11 89 89 HOH HOH B . G 4 HOH 12 95 95 HOH HOH B . G 4 HOH 13 100 100 HOH HOH B . G 4 HOH 14 101 101 HOH HOH B . G 4 HOH 15 109 109 HOH HOH B . G 4 HOH 16 116 116 HOH HOH B . G 4 HOH 17 123 123 HOH HOH B . G 4 HOH 18 124 124 HOH HOH B . G 4 HOH 19 125 125 HOH HOH B . G 4 HOH 20 136 136 HOH HOH B . G 4 HOH 21 137 137 HOH HOH B . G 4 HOH 22 142 142 HOH HOH B . G 4 HOH 23 144 144 HOH HOH B . G 4 HOH 24 249 249 HOH HOH B . G 4 HOH 25 253 253 HOH HOH B . H 4 HOH 1 233 233 HOH HOH C . H 4 HOH 2 235 235 HOH HOH C . H 4 HOH 3 236 236 HOH HOH C . H 4 HOH 4 237 237 HOH HOH C . H 4 HOH 5 238 238 HOH HOH C . H 4 HOH 6 239 239 HOH HOH C . H 4 HOH 7 240 240 HOH HOH C . H 4 HOH 8 241 241 HOH HOH C . H 4 HOH 9 242 242 HOH HOH C . H 4 HOH 10 243 243 HOH HOH C . H 4 HOH 11 244 244 HOH HOH C . H 4 HOH 12 245 245 HOH HOH C . H 4 HOH 13 246 246 HOH HOH C . H 4 HOH 14 247 247 HOH HOH C . H 4 HOH 15 248 248 HOH HOH C . H 4 HOH 16 249 249 HOH HOH C . H 4 HOH 17 250 250 HOH HOH C . H 4 HOH 18 251 251 HOH HOH C . H 4 HOH 19 252 252 HOH HOH C . H 4 HOH 20 253 253 HOH HOH C . H 4 HOH 21 254 254 HOH HOH C . H 4 HOH 22 255 255 HOH HOH C . H 4 HOH 23 256 256 HOH HOH C . H 4 HOH 24 257 257 HOH HOH C . H 4 HOH 25 258 258 HOH HOH C . H 4 HOH 26 259 259 HOH HOH C . H 4 HOH 27 260 260 HOH HOH C . H 4 HOH 28 261 261 HOH HOH C . H 4 HOH 29 262 262 HOH HOH C . H 4 HOH 30 263 263 HOH HOH C . H 4 HOH 31 264 264 HOH HOH C . H 4 HOH 32 265 265 HOH HOH C . H 4 HOH 33 266 266 HOH HOH C . H 4 HOH 34 267 267 HOH HOH C . H 4 HOH 35 268 268 HOH HOH C . H 4 HOH 36 269 269 HOH HOH C . H 4 HOH 37 270 270 HOH HOH C . H 4 HOH 38 271 271 HOH HOH C . H 4 HOH 39 272 272 HOH HOH C . H 4 HOH 40 273 273 HOH HOH C . H 4 HOH 41 274 274 HOH HOH C . H 4 HOH 42 275 275 HOH HOH C . H 4 HOH 43 276 276 HOH HOH C . H 4 HOH 44 277 277 HOH HOH C . H 4 HOH 45 278 278 HOH HOH C . H 4 HOH 46 279 279 HOH HOH C . H 4 HOH 47 280 280 HOH HOH C . H 4 HOH 48 281 281 HOH HOH C . H 4 HOH 49 282 282 HOH HOH C . H 4 HOH 50 283 283 HOH HOH C . H 4 HOH 51 284 284 HOH HOH C . H 4 HOH 52 285 285 HOH HOH C . H 4 HOH 53 286 286 HOH HOH C . H 4 HOH 54 287 287 HOH HOH C . H 4 HOH 55 288 288 HOH HOH C . H 4 HOH 56 289 289 HOH HOH C . H 4 HOH 57 290 290 HOH HOH C . H 4 HOH 58 291 291 HOH HOH C . H 4 HOH 59 292 292 HOH HOH C . H 4 HOH 60 293 293 HOH HOH C . H 4 HOH 61 294 294 HOH HOH C . H 4 HOH 62 295 295 HOH HOH C . H 4 HOH 63 296 296 HOH HOH C . I 4 HOH 1 15 15 HOH HOH D . I 4 HOH 2 55 55 HOH HOH D . I 4 HOH 3 59 59 HOH HOH D . I 4 HOH 4 71 71 HOH HOH D . I 4 HOH 5 78 78 HOH HOH D . I 4 HOH 6 80 80 HOH HOH D . I 4 HOH 7 83 83 HOH HOH D . I 4 HOH 8 87 87 HOH HOH D . I 4 HOH 9 90 90 HOH HOH D . I 4 HOH 10 91 91 HOH HOH D . I 4 HOH 11 110 110 HOH HOH D . I 4 HOH 12 127 127 HOH HOH D . I 4 HOH 13 165 165 HOH HOH D . I 4 HOH 14 166 166 HOH HOH D . I 4 HOH 15 167 167 HOH HOH D . I 4 HOH 16 172 172 HOH HOH D . I 4 HOH 17 173 173 HOH HOH D . I 4 HOH 18 248 248 HOH HOH D . I 4 HOH 19 297 297 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA tetrameric 4 2 author_and_software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,F,G 2 1,3 C,D,E,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4040 ? 1 MORE -19 ? 1 'SSA (A^2)' 15980 ? 2 'ABSA (A^2)' 4400 ? 2 MORE -38 ? 2 'SSA (A^2)' 16050 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 57.2800632103 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 65.0154365134 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? H HOH . ? C HOH 262 ? 1_555 NA ? E NA . ? C NA 1 ? 1_555 O ? H HOH . ? C HOH 266 ? 1_555 88.7 ? 2 O ? H HOH . ? C HOH 262 ? 1_555 NA ? E NA . ? C NA 1 ? 1_555 O ? H HOH . ? C HOH 285 ? 1_555 95.4 ? 3 O ? H HOH . ? C HOH 266 ? 1_555 NA ? E NA . ? C NA 1 ? 1_555 O ? H HOH . ? C HOH 285 ? 1_555 77.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' struct_ref_seq_dif 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 32.4421 _pdbx_refine_tls.origin_y 1.8450 _pdbx_refine_tls.origin_z 18.6056 _pdbx_refine_tls.T[1][1] -0.0111 _pdbx_refine_tls.T[2][2] -0.0474 _pdbx_refine_tls.T[3][3] -0.0271 _pdbx_refine_tls.T[1][2] -0.0155 _pdbx_refine_tls.T[1][3] -0.0067 _pdbx_refine_tls.T[2][3] 0.0369 _pdbx_refine_tls.L[1][1] 0.7634 _pdbx_refine_tls.L[2][2] 0.0489 _pdbx_refine_tls.L[3][3] 0.6241 _pdbx_refine_tls.L[1][2] 0.1292 _pdbx_refine_tls.L[1][3] 0.6812 _pdbx_refine_tls.L[2][3] 0.0981 _pdbx_refine_tls.S[1][1] -0.0048 _pdbx_refine_tls.S[1][2] 0.0790 _pdbx_refine_tls.S[1][3] 0.0547 _pdbx_refine_tls.S[2][1] 0.0320 _pdbx_refine_tls.S[2][2] -0.0239 _pdbx_refine_tls.S[2][3] 0.0141 _pdbx_refine_tls.S[3][1] 0.0094 _pdbx_refine_tls.S[3][2] 0.1036 _pdbx_refine_tls.S[3][3] 0.0286 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 61 A 1 A 194 A 134 ? 'X-RAY DIFFRACTION' ? 2 1 B 1 B 1 B 12 B 12 ? 'X-RAY DIFFRACTION' ? 3 1 C 62 C 2 C 194 C 134 ? 'X-RAY DIFFRACTION' ? 4 1 D 1 D 1 D 12 D 12 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0066 ? 1 MAR345dtb 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 MOLREP phasing . ? 5 CNS refinement . ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 102.15 108.00 -5.85 0.70 N 2 1 "O5'" B DG 4 ? ? "C5'" B DG 4 ? ? "C4'" B DG 4 ? ? 104.25 109.40 -5.15 0.80 N 3 1 "O4'" B DC 9 ? ? "C1'" B DC 9 ? ? N1 B DC 9 ? ? 103.32 108.00 -4.68 0.70 N 4 1 "O4'" B DC 11 ? ? "C4'" B DC 11 ? ? "C3'" B DC 11 ? ? 101.86 104.50 -2.64 0.40 N 5 1 "O4'" D DC 1 ? ? "C1'" D DC 1 ? ? N1 D DC 1 ? ? 110.65 108.30 2.35 0.30 N 6 1 "O4'" D DG 2 ? ? "C1'" D DG 2 ? ? N9 D DG 2 ? ? 112.76 108.30 4.46 0.30 N 7 1 "O4'" D DC 3 ? ? "C1'" D DC 3 ? ? N1 D DC 3 ? ? 103.62 108.00 -4.38 0.70 N 8 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 114.11 108.30 5.81 0.30 N 9 1 "C3'" D DG 4 ? ? "O3'" D DG 4 ? ? P D DA 5 ? ? 127.40 119.70 7.70 1.20 Y 10 1 "O4'" D DC 9 ? ? "C4'" D DC 9 ? ? "C3'" D DC 9 ? ? 100.02 104.50 -4.48 0.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 62 ? ? -82.17 -153.48 2 1 GLN A 75 ? ? -84.44 -105.54 3 1 ASP A 192 ? ? -33.77 131.27 4 1 SER C 74 ? ? -162.87 111.33 5 1 ASP C 192 ? ? -39.92 130.26 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLN 75 ? CB ? A GLN 15 CB 2 1 Y 0 A GLN 75 ? CG ? A GLN 15 CG 3 1 Y 0 A GLN 75 ? CD ? A GLN 15 CD 4 1 Y 0 A GLN 75 ? OE1 ? A GLN 15 OE1 5 1 Y 0 A GLN 75 ? NE2 ? A GLN 15 NE2 6 1 Y 0 C GLN 75 ? CB ? C GLN 15 CB 7 1 Y 0 C GLN 75 ? CG ? C GLN 15 CG 8 1 Y 0 C GLN 75 ? CD ? C GLN 15 CD # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id C _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 61 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id C _pdbx_unobs_or_zero_occ_residues.label_comp_id GLU _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 NA NA NA N N 379 PHE N N N N 380 PHE CA C N S 381 PHE C C N N 382 PHE O O N N 383 PHE CB C N N 384 PHE CG C Y N 385 PHE CD1 C Y N 386 PHE CD2 C Y N 387 PHE CE1 C Y N 388 PHE CE2 C Y N 389 PHE CZ C Y N 390 PHE OXT O N N 391 PHE H H N N 392 PHE H2 H N N 393 PHE HA H N N 394 PHE HB2 H N N 395 PHE HB3 H N N 396 PHE HD1 H N N 397 PHE HD2 H N N 398 PHE HE1 H N N 399 PHE HE2 H N N 400 PHE HZ H N N 401 PHE HXT H N N 402 PRO N N N N 403 PRO CA C N S 404 PRO C C N N 405 PRO O O N N 406 PRO CB C N N 407 PRO CG C N N 408 PRO CD C N N 409 PRO OXT O N N 410 PRO H H N N 411 PRO HA H N N 412 PRO HB2 H N N 413 PRO HB3 H N N 414 PRO HG2 H N N 415 PRO HG3 H N N 416 PRO HD2 H N N 417 PRO HD3 H N N 418 PRO HXT H N N 419 SER N N N N 420 SER CA C N S 421 SER C C N N 422 SER O O N N 423 SER CB C N N 424 SER OG O N N 425 SER OXT O N N 426 SER H H N N 427 SER H2 H N N 428 SER HA H N N 429 SER HB2 H N N 430 SER HB3 H N N 431 SER HG H N N 432 SER HXT H N N 433 THR N N N N 434 THR CA C N S 435 THR C C N N 436 THR O O N N 437 THR CB C N R 438 THR OG1 O N N 439 THR CG2 C N N 440 THR OXT O N N 441 THR H H N N 442 THR H2 H N N 443 THR HA H N N 444 THR HB H N N 445 THR HG1 H N N 446 THR HG21 H N N 447 THR HG22 H N N 448 THR HG23 H N N 449 THR HXT H N N 450 TRP N N N N 451 TRP CA C N S 452 TRP C C N N 453 TRP O O N N 454 TRP CB C N N 455 TRP CG C Y N 456 TRP CD1 C Y N 457 TRP CD2 C Y N 458 TRP NE1 N Y N 459 TRP CE2 C Y N 460 TRP CE3 C Y N 461 TRP CZ2 C Y N 462 TRP CZ3 C Y N 463 TRP CH2 C Y N 464 TRP OXT O N N 465 TRP H H N N 466 TRP H2 H N N 467 TRP HA H N N 468 TRP HB2 H N N 469 TRP HB3 H N N 470 TRP HD1 H N N 471 TRP HE1 H N N 472 TRP HE3 H N N 473 TRP HZ2 H N N 474 TRP HZ3 H N N 475 TRP HH2 H N N 476 TRP HXT H N N 477 TYR N N N N 478 TYR CA C N S 479 TYR C C N N 480 TYR O O N N 481 TYR CB C N N 482 TYR CG C Y N 483 TYR CD1 C Y N 484 TYR CD2 C Y N 485 TYR CE1 C Y N 486 TYR CE2 C Y N 487 TYR CZ C Y N 488 TYR OH O N N 489 TYR OXT O N N 490 TYR H H N N 491 TYR H2 H N N 492 TYR HA H N N 493 TYR HB2 H N N 494 TYR HB3 H N N 495 TYR HD1 H N N 496 TYR HD2 H N N 497 TYR HE1 H N N 498 TYR HE2 H N N 499 TYR HH H N N 500 TYR HXT H N N 501 VAL N N N N 502 VAL CA C N S 503 VAL C C N N 504 VAL O O N N 505 VAL CB C N N 506 VAL CG1 C N N 507 VAL CG2 C N N 508 VAL OXT O N N 509 VAL H H N N 510 VAL H2 H N N 511 VAL HA H N N 512 VAL HB H N N 513 VAL HG11 H N N 514 VAL HG12 H N N 515 VAL HG13 H N N 516 VAL HG21 H N N 517 VAL HG22 H N N 518 VAL HG23 H N N 519 VAL HXT H N N 520 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TRP N CA sing N N 442 TRP N H sing N N 443 TRP N H2 sing N N 444 TRP CA C sing N N 445 TRP CA CB sing N N 446 TRP CA HA sing N N 447 TRP C O doub N N 448 TRP C OXT sing N N 449 TRP CB CG sing N N 450 TRP CB HB2 sing N N 451 TRP CB HB3 sing N N 452 TRP CG CD1 doub Y N 453 TRP CG CD2 sing Y N 454 TRP CD1 NE1 sing Y N 455 TRP CD1 HD1 sing N N 456 TRP CD2 CE2 doub Y N 457 TRP CD2 CE3 sing Y N 458 TRP NE1 CE2 sing Y N 459 TRP NE1 HE1 sing N N 460 TRP CE2 CZ2 sing Y N 461 TRP CE3 CZ3 doub Y N 462 TRP CE3 HE3 sing N N 463 TRP CZ2 CH2 doub Y N 464 TRP CZ2 HZ2 sing N N 465 TRP CZ3 CH2 sing Y N 466 TRP CZ3 HZ3 sing N N 467 TRP CH2 HH2 sing N N 468 TRP OXT HXT sing N N 469 TYR N CA sing N N 470 TYR N H sing N N 471 TYR N H2 sing N N 472 TYR CA C sing N N 473 TYR CA CB sing N N 474 TYR CA HA sing N N 475 TYR C O doub N N 476 TYR C OXT sing N N 477 TYR CB CG sing N N 478 TYR CB HB2 sing N N 479 TYR CB HB3 sing N N 480 TYR CG CD1 doub Y N 481 TYR CG CD2 sing Y N 482 TYR CD1 CE1 sing Y N 483 TYR CD1 HD1 sing N N 484 TYR CD2 CE2 doub Y N 485 TYR CD2 HD2 sing N N 486 TYR CE1 CZ doub Y N 487 TYR CE1 HE1 sing N N 488 TYR CE2 CZ sing Y N 489 TYR CE2 HE2 sing N N 490 TYR CZ OH sing N N 491 TYR OH HH sing N N 492 TYR OXT HXT sing N N 493 VAL N CA sing N N 494 VAL N H sing N N 495 VAL N H2 sing N N 496 VAL CA C sing N N 497 VAL CA CB sing N N 498 VAL CA HA sing N N 499 VAL C O doub N N 500 VAL C OXT sing N N 501 VAL CB CG1 sing N N 502 VAL CB CG2 sing N N 503 VAL CB HB sing N N 504 VAL CG1 HG11 sing N N 505 VAL CG1 HG12 sing N N 506 VAL CG1 HG13 sing N N 507 VAL CG2 HG21 sing N N 508 VAL CG2 HG22 sing N N 509 VAL CG2 HG23 sing N N 510 VAL OXT HXT sing N N 511 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3D0P 'double helix' 3D0P 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 D DC 1 1_555 D DG 12 2_656 0.167 -0.177 0.398 -19.861 -1.752 -2.897 1 D_DC1:DG12_D D 1 ? D 12 ? 19 1 1 D DG 2 1_555 D DC 11 2_656 -0.336 -0.260 0.049 4.383 -4.013 -0.290 2 D_DG2:DC11_D D 2 ? D 11 ? 19 1 1 D DC 3 1_555 D DG 10 2_656 0.053 -0.095 -0.152 4.702 -9.083 0.051 3 D_DC3:DG10_D D 3 ? D 10 ? 19 1 1 D DG 4 1_555 D DC 9 2_656 -0.098 -0.114 0.284 16.779 -8.151 -0.753 4 D_DG4:DC9_D D 4 ? D 9 ? 19 1 1 D DA 5 1_555 D DT 8 2_656 -0.005 -0.202 -0.052 5.503 -17.518 2.066 5 D_DA5:DT8_D D 5 ? D 8 ? 20 1 1 D DA 6 1_555 D DT 7 2_656 -0.027 -0.075 0.098 4.355 -20.075 3.708 6 D_DA6:DT7_D D 6 ? D 7 ? 20 1 1 D DT 7 1_555 D DA 6 2_656 0.027 -0.075 0.098 -4.355 -20.075 3.708 7 D_DT7:DA6_D D 7 ? D 6 ? 20 1 1 D DT 8 1_555 D DA 5 2_656 0.005 -0.202 -0.052 -5.503 -17.518 2.066 8 D_DT8:DA5_D D 8 ? D 5 ? 20 1 1 D DC 9 1_555 D DG 4 2_656 0.098 -0.114 0.284 -16.779 -8.151 -0.753 9 D_DC9:DG4_D D 9 ? D 4 ? 19 1 1 D DG 10 1_555 D DC 3 2_656 -0.053 -0.095 -0.152 -4.702 -9.083 0.051 10 D_DG10:DC3_D D 10 ? D 3 ? 19 1 1 D DC 11 1_555 D DG 2 2_656 0.336 -0.260 0.049 -4.383 -4.013 -0.290 11 D_DC11:DG2_D D 11 ? D 2 ? 19 1 1 D DG 12 1_555 D DC 1 2_656 -0.167 -0.177 0.398 19.861 -1.752 -2.897 12 D_DG12:DC1_D D 12 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 D DC 1 1_555 D DG 12 2_656 D DG 2 1_555 D DC 11 2_656 0.332 -0.010 2.799 2.862 11.443 28.221 -1.978 -0.139 2.618 22.276 -5.572 30.541 1 DD_DC1DG2:DC11DG12_DD D 1 ? D 12 ? D 2 ? D 11 ? 1 D DG 2 1_555 D DC 11 2_656 D DC 3 1_555 D DG 10 2_656 -0.421 -0.539 3.363 2.805 7.502 31.754 -2.258 1.234 3.111 13.444 -5.027 32.723 2 DD_DG2DC3:DG10DC11_DD D 2 ? D 11 ? D 3 ? D 10 ? 1 D DC 3 1_555 D DG 10 2_656 D DG 4 1_555 D DC 9 2_656 0.532 0.591 3.185 -1.682 15.859 24.734 -2.338 -1.421 2.976 33.001 3.500 29.363 3 DD_DC3DG4:DC9DG10_DD D 3 ? D 10 ? D 4 ? D 9 ? 1 D DG 4 1_555 D DC 9 2_656 D DA 5 1_555 D DT 8 2_656 -0.456 -0.117 3.490 2.457 3.523 41.849 -0.551 0.906 3.439 4.916 -3.428 42.059 4 DD_DG4DA5:DT8DC9_DD D 4 ? D 9 ? D 5 ? D 8 ? 1 D DA 5 1_555 D DT 8 2_656 D DA 6 1_555 D DT 7 2_656 0.092 -0.185 3.195 -1.707 2.794 37.022 -0.653 -0.367 3.166 4.389 2.682 37.162 5 DD_DA5DA6:DT7DT8_DD D 5 ? D 8 ? D 6 ? D 7 ? 1 D DA 6 1_555 D DT 7 2_656 D DT 7 1_555 D DA 6 2_656 0.000 -0.482 3.416 0.000 1.175 32.151 -1.089 0.000 3.397 2.120 0.000 32.172 6 DD_DA6DT7:DA6DT7_DD D 6 ? D 7 ? D 7 ? D 6 ? 1 D DT 7 1_555 D DA 6 2_656 D DT 8 1_555 D DA 5 2_656 -0.092 -0.185 3.195 1.707 2.794 37.022 -0.653 0.367 3.166 4.389 -2.682 37.162 7 DD_DT7DT8:DA5DA6_DD D 7 ? D 6 ? D 8 ? D 5 ? 1 D DT 8 1_555 D DA 5 2_656 D DC 9 1_555 D DG 4 2_656 0.456 -0.117 3.490 -2.457 3.523 41.849 -0.551 -0.906 3.439 4.916 3.428 42.059 8 DD_DT8DC9:DG4DA5_DD D 8 ? D 5 ? D 9 ? D 4 ? 1 D DC 9 1_555 D DG 4 2_656 D DG 10 1_555 D DC 3 2_656 -0.532 0.591 3.185 1.682 15.859 24.734 -2.338 1.421 2.976 33.001 -3.500 29.363 9 DD_DC9DG10:DC3DG4_DD D 9 ? D 4 ? D 10 ? D 3 ? 1 D DG 10 1_555 D DC 3 2_656 D DC 11 1_555 D DG 2 2_656 0.421 -0.539 3.363 -2.805 7.502 31.754 -2.258 -1.234 3.111 13.444 5.027 32.723 10 DD_DG10DC11:DG2DC3_DD D 10 ? D 3 ? D 11 ? D 2 ? 1 D DC 11 1_555 D DG 2 2_656 D DG 12 1_555 D DC 1 2_656 -0.332 -0.010 2.799 -2.862 11.443 28.221 -1.978 0.139 2.618 22.276 5.572 30.541 11 DD_DC11DG12:DC1DG2_DD D 11 ? D 2 ? D 12 ? D 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SODIUM ION' NA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZBI _pdbx_initial_refinement_model.details 'PDB ENTRY 1ZBI, using one protein molecule.' #