HEADER TRANSFERASE 06-MAY-08 3D1J TITLE CRYSTAL STRUCTURE OF E.COLI GS MUTANT DMGS(C7S;C408S) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: STARCH [BACTERIAL GLYCOGEN] SYNTHASE; COMPND 5 EC: 2.4.1.21; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: GLGA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24A KEYWDS GLYCOSYL-TRANSFERASE, GT-B FOLD, ROSSMANN FOLD, OPEN FORM, GLYCOGEN KEYWDS 2 BIOSYNTHESIS, GLYCOSYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR F.SHENG,J.H.GEIGER REVDAT 4 30-AUG-23 3D1J 1 REMARK REVDAT 3 20-OCT-21 3D1J 1 SEQADV REVDAT 2 07-JUL-09 3D1J 1 JRNL REVDAT 1 24-MAR-09 3D1J 0 JRNL AUTH F.SHENG,X.JIA,A.YEP,J.PREISS,J.H.GEIGER JRNL TITL THE CRYSTAL STRUCTURES OF THE OPEN AND CATALYTICALLY JRNL TITL 2 COMPETENT CLOSED CONFORMATION OF ESCHERICHIA COLI GLYCOGEN JRNL TITL 3 SYNTHASE. JRNL REF J.BIOL.CHEM. V. 284 17796 2009 JRNL REFN ISSN 0021-9258 JRNL PMID 19244233 JRNL DOI 10.1074/JBC.M809804200 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 17683 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 879 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1234 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3718 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 20 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.29000 REMARK 3 B22 (A**2) : 1.29000 REMARK 3 B33 (A**2) : -1.93000 REMARK 3 B12 (A**2) : 0.64000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.909 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.380 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.266 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.380 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3818 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5194 ; 1.469 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 476 ; 6.225 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 179 ;33.309 ;22.849 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 587 ;19.349 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;20.682 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 561 ; 0.094 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2973 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2036 ; 0.284 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2639 ; 0.346 ; 0.500 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 291 ; 0.184 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 37 ; 0.305 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 8 ; 0.315 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2381 ; 0.882 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3758 ; 1.546 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1612 ; 0.681 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1435 ; 1.076 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 3D1J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000047474. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-04 REMARK 200 TEMPERATURE (KELVIN) : 98 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 32-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20539 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.34500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1RZU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% (W/V) PEG 4000, 0.1 M TRIS, 0.2 M REMARK 280 NA TARTRATE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 116.47950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.24947 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 28.51300 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 116.47950 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 67.24947 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 28.51300 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 116.47950 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 67.24947 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 28.51300 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 116.47950 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 67.24947 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 28.51300 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 116.47950 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 67.24947 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 28.51300 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 116.47950 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 67.24947 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.51300 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 134.49894 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 57.02600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 134.49894 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 57.02600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 134.49894 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 57.02600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 134.49894 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 57.02600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 134.49894 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 57.02600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 134.49894 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 57.02600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 476 REMARK 465 LYS A 477 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LEU A 108 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 10 112.04 -161.10 REMARK 500 THR A 16 15.17 -140.81 REMARK 500 ALA A 84 69.97 -157.20 REMARK 500 PRO A 94 -7.42 -49.82 REMARK 500 ALA A 102 153.60 -49.88 REMARK 500 ASP A 137 163.22 71.68 REMARK 500 LEU A 163 -7.86 -47.44 REMARK 500 HIS A 172 1.31 -64.95 REMARK 500 ASN A 192 60.21 37.32 REMARK 500 ALA A 200 -73.43 -47.16 REMARK 500 TYR A 226 49.82 36.90 REMARK 500 SER A 254 115.78 170.20 REMARK 500 ASP A 258 106.92 -59.31 REMARK 500 THR A 269 40.77 -141.25 REMARK 500 LYS A 277 -72.74 -65.63 REMARK 500 ARG A 278 -66.90 -29.08 REMARK 500 ALA A 283 -9.67 -54.70 REMARK 500 ASP A 289 120.55 -179.99 REMARK 500 GLU A 319 -37.48 -36.42 REMARK 500 ASP A 331 107.35 -46.74 REMARK 500 PRO A 332 -65.29 -28.51 REMARK 500 HIS A 356 89.95 -178.86 REMARK 500 PRO A 373 46.67 -94.33 REMARK 500 TYR A 474 59.95 -68.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2QYY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD-TYPE E.COLI GS IN COMPLEX WITH ADP AND DGM REMARK 900 RELATED ID: 2QZS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD-TYPE E.COLI GS IN COMPLEX WITH ADP AND REMARK 900 GLUCOSE REMARK 900 RELATED ID: 2R4U RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD-TYPE E.COLI GS IN COMPLEX WITH ADP AND REMARK 900 GLUCOSE REMARK 900 RELATED ID: 2R4T RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF WILD-TYPE E.COLI GS IN COMPLEX WITH ADP AND REMARK 900 GLUCOSE DBREF 3D1J A 1 477 UNP P0A6U8 GLGA_ECOLI 1 477 SEQADV 3D1J SER A 7 UNP P0A6U8 CYS 7 ENGINEERED MUTATION SEQADV 3D1J SER A 408 UNP P0A6U8 CYS 408 ENGINEERED MUTATION SEQRES 1 A 477 MET GLN VAL LEU HIS VAL SER SER GLU MET PHE PRO LEU SEQRES 2 A 477 LEU LYS THR GLY GLY LEU ALA ASP VAL ILE GLY ALA LEU SEQRES 3 A 477 PRO ALA ALA GLN ILE ALA ASP GLY VAL ASP ALA ARG VAL SEQRES 4 A 477 LEU LEU PRO ALA PHE PRO ASP ILE ARG ARG GLY VAL THR SEQRES 5 A 477 ASP ALA GLN VAL VAL SER ARG ARG ASP THR PHE ALA GLY SEQRES 6 A 477 HIS ILE THR LEU LEU PHE GLY HIS TYR ASN GLY VAL GLY SEQRES 7 A 477 ILE TYR LEU ILE ASP ALA PRO HIS LEU TYR ASP ARG PRO SEQRES 8 A 477 GLY SER PRO TYR HIS ASP THR ASN LEU PHE ALA TYR THR SEQRES 9 A 477 ASP ASN VAL LEU ARG PHE ALA LEU LEU GLY TRP VAL GLY SEQRES 10 A 477 ALA GLU MET ALA SER GLY LEU ASP PRO PHE TRP ARG PRO SEQRES 11 A 477 ASP VAL VAL HIS ALA HIS ASP TRP HIS ALA GLY LEU ALA SEQRES 12 A 477 PRO ALA TYR LEU ALA ALA ARG GLY ARG PRO ALA LYS SER SEQRES 13 A 477 VAL PHE THR VAL HIS ASN LEU ALA TYR GLN GLY MET PHE SEQRES 14 A 477 TYR ALA HIS HIS MET ASN ASP ILE GLN LEU PRO TRP SER SEQRES 15 A 477 PHE PHE ASN ILE HIS GLY LEU GLU PHE ASN GLY GLN ILE SEQRES 16 A 477 SER PHE LEU LYS ALA GLY LEU TYR TYR ALA ASP HIS ILE SEQRES 17 A 477 THR ALA VAL SER PRO THR TYR ALA ARG GLU ILE THR GLU SEQRES 18 A 477 PRO GLN PHE ALA TYR GLY MET GLU GLY LEU LEU GLN GLN SEQRES 19 A 477 ARG HIS ARG GLU GLY ARG LEU SER GLY VAL LEU ASN GLY SEQRES 20 A 477 VAL ASP GLU LYS ILE TRP SER PRO GLU THR ASP LEU LEU SEQRES 21 A 477 LEU ALA SER ARG TYR THR ARG ASP THR LEU GLU ASP LYS SEQRES 22 A 477 ALA GLU ASN LYS ARG GLN LEU GLN ILE ALA MET GLY LEU SEQRES 23 A 477 LYS VAL ASP ASP LYS VAL PRO LEU PHE ALA VAL VAL SER SEQRES 24 A 477 ARG LEU THR SER GLN LYS GLY LEU ASP LEU VAL LEU GLU SEQRES 25 A 477 ALA LEU PRO GLY LEU LEU GLU GLN GLY GLY GLN LEU ALA SEQRES 26 A 477 LEU LEU GLY ALA GLY ASP PRO VAL LEU GLN GLU GLY PHE SEQRES 27 A 477 LEU ALA ALA ALA ALA GLU TYR PRO GLY GLN VAL GLY VAL SEQRES 28 A 477 GLN ILE GLY TYR HIS GLU ALA PHE SER HIS ARG ILE MET SEQRES 29 A 477 GLY GLY ALA ASP VAL ILE LEU VAL PRO SER ARG PHE GLU SEQRES 30 A 477 PRO CYS GLY LEU THR GLN LEU TYR GLY LEU LYS TYR GLY SEQRES 31 A 477 THR LEU PRO LEU VAL ARG ARG THR GLY GLY LEU ALA ASP SEQRES 32 A 477 THR VAL SER ASP SER SER LEU GLU ASN LEU ALA ASP GLY SEQRES 33 A 477 VAL ALA SER GLY PHE VAL PHE GLU ASP SER ASN ALA TRP SEQRES 34 A 477 SER LEU LEU ARG ALA ILE ARG ARG ALA PHE VAL LEU TRP SEQRES 35 A 477 SER ARG PRO SER LEU TRP ARG PHE VAL GLN ARG GLN ALA SEQRES 36 A 477 MET ALA MET ASP PHE SER TRP GLN VAL ALA ALA LYS SER SEQRES 37 A 477 TYR ARG GLU LEU TYR TYR ARG LEU LYS FORMUL 2 HOH *20(H2 O) HELIX 1 1 GLY A 18 ASP A 33 1 16 HELIX 2 2 PHE A 44 ARG A 49 1 6 HELIX 3 3 ALA A 84 ASP A 89 1 6 HELIX 4 4 ASP A 105 SER A 122 1 18 HELIX 5 5 TRP A 138 GLY A 141 5 4 HELIX 6 6 LEU A 142 ARG A 150 1 9 HELIX 7 7 TYR A 170 ASP A 176 5 7 HELIX 8 8 PRO A 180 PHE A 184 5 5 HELIX 9 9 PHE A 197 ALA A 205 1 9 HELIX 10 10 SER A 212 ILE A 219 1 8 HELIX 11 11 MET A 228 GLY A 239 1 12 HELIX 12 12 THR A 269 GLU A 271 5 3 HELIX 13 13 ASP A 272 GLY A 285 1 14 HELIX 14 14 GLY A 306 GLN A 320 1 15 HELIX 15 15 ASP A 331 TYR A 345 1 15 HELIX 16 16 HIS A 356 ALA A 367 1 12 HELIX 17 17 LEU A 381 GLY A 390 1 10 HELIX 18 18 THR A 398 VAL A 405 1 8 HELIX 19 19 SER A 409 ASP A 415 1 7 HELIX 20 20 ASN A 427 SER A 443 1 17 HELIX 21 21 ARG A 444 MET A 458 1 15 HELIX 22 22 SER A 461 TYR A 474 1 14 SHEET 1 A 9 GLN A 55 ARG A 60 0 SHEET 2 A 9 ILE A 67 TYR A 74 -1 O LEU A 69 N VAL A 57 SHEET 3 A 9 VAL A 77 ASP A 83 -1 O ILE A 79 N GLY A 72 SHEET 4 A 9 ASP A 36 PRO A 42 1 N VAL A 39 O TYR A 80 SHEET 5 A 9 GLN A 2 VAL A 6 1 N HIS A 5 O ARG A 38 SHEET 6 A 9 VAL A 132 HIS A 136 1 O HIS A 134 N VAL A 6 SHEET 7 A 9 LYS A 155 VAL A 160 1 O LYS A 155 N VAL A 133 SHEET 8 A 9 HIS A 207 ALA A 210 1 O THR A 209 N VAL A 160 SHEET 9 A 9 LEU A 241 GLY A 243 1 O SER A 242 N ILE A 208 SHEET 1 B 3 MET A 168 PHE A 169 0 SHEET 2 B 3 GLN A 194 SER A 196 -1 O ILE A 195 N PHE A 169 SHEET 3 B 3 GLU A 190 PHE A 191 -1 N PHE A 191 O GLN A 194 SHEET 1 C 6 VAL A 349 ILE A 353 0 SHEET 2 C 6 GLN A 323 GLY A 328 1 N LEU A 326 O GLN A 352 SHEET 3 C 6 LEU A 294 VAL A 298 1 N PHE A 295 O GLN A 323 SHEET 4 C 6 VAL A 369 VAL A 372 1 O VAL A 369 N ALA A 296 SHEET 5 C 6 LEU A 392 ARG A 396 1 O LEU A 394 N VAL A 372 SHEET 6 C 6 PHE A 421 PHE A 423 1 O PHE A 421 N VAL A 395 CISPEP 1 PHE A 11 PRO A 12 0 3.47 CRYST1 232.959 232.959 85.539 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004293 0.002478 0.000000 0.00000 SCALE2 0.000000 0.004957 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011691 0.00000