HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 13-MAY-08 3D3Y TITLE CRYSTAL STRUCTURE OF A CONSERVED PROTEIN FROM ENTEROCOCCUS FAECALIS TITLE 2 V583 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS; SOURCE 3 ORGANISM_TAXID: 226185; SOURCE 4 STRAIN: V583; SOURCE 5 ATCC: 700802; SOURCE 6 GENE: EF_3151; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS APC29635, CONSERVED PROTEIN, ENTEROCOCCUS FAECALIS V583, STRUCTURAL KEYWDS 2 GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,H.LI,S.CLANCY,A.JOACHIMIAK,MIDWEST CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (MCSG) REVDAT 3 13-JUL-11 3D3Y 1 VERSN REVDAT 2 24-FEB-09 3D3Y 1 VERSN REVDAT 1 15-JUL-08 3D3Y 0 JRNL AUTH K.TAN,H.LI,S.CLANCY,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF A CONSERVED PROTEIN FROM JRNL TITL 2 ENTEROCOCCUS FAECALIS V583. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 35207 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1850 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2497 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2280 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.2570 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3429 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 215 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.24000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.145 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.097 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.775 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3523 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4756 ; 1.395 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 426 ; 5.805 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 180 ;39.209 ;25.222 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 630 ;14.089 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.177 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 531 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2674 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1626 ; 0.210 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2440 ; 0.305 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 198 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.208 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.143 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2218 ; 1.040 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3430 ; 1.450 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1500 ; 2.644 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1325 ; 3.953 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 231 REMARK 3 ORIGIN FOR THE GROUP (A): 18.6690 43.6330 -7.3000 REMARK 3 T TENSOR REMARK 3 T11: -0.1618 T22: -0.1379 REMARK 3 T33: -0.0723 T12: 0.0459 REMARK 3 T13: -0.0067 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.7313 L22: 0.8391 REMARK 3 L33: 1.8482 L12: 0.0614 REMARK 3 L13: -0.3661 L23: 0.0861 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: 0.0796 S13: 0.0559 REMARK 3 S21: -0.0382 S22: 0.0073 S23: -0.0670 REMARK 3 S31: -0.1643 S32: -0.1445 S33: -0.0421 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 232 A 422 REMARK 3 ORIGIN FOR THE GROUP (A): 26.3490 44.0540 22.1480 REMARK 3 T TENSOR REMARK 3 T11: -0.1032 T22: -0.1492 REMARK 3 T33: -0.0626 T12: 0.0232 REMARK 3 T13: -0.0044 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.9001 L22: 1.0538 REMARK 3 L33: 0.8629 L12: 0.2350 REMARK 3 L13: 0.0944 L23: 0.0924 REMARK 3 S TENSOR REMARK 3 S11: 0.0184 S12: 0.0176 S13: -0.0406 REMARK 3 S21: 0.0110 S22: 0.0078 S23: -0.0318 REMARK 3 S31: -0.0790 S32: 0.0299 S33: -0.0262 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3D3Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-08. REMARK 100 THE RCSB ID CODE IS RCSB047561. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37069 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 38.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.58100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, RESOLVE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE, 4M AMMONIUM REMARK 280 ACETATE, PH 4.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 61.21850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.21850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 34.50150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 61.21850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.21850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.50150 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 61.21850 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 61.21850 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 34.50150 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 61.21850 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 61.21850 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 34.50150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS REMARK 300 EXPERIMENTALLY UNKNOWN. FROM MOLECULAR PACKING, IT IS LIKELY A REMARK 300 MONOMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 67 36.44 -81.54 REMARK 500 GLN A 98 -70.23 -88.18 REMARK 500 ALA A 121 54.99 38.87 REMARK 500 ASP A 261 29.12 49.69 REMARK 500 LYS A 294 -73.11 67.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 423 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 424 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 425 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 426 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 429 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 430 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC29635 RELATED DB: TARGETDB DBREF 3D3Y A 1 422 UNP Q82ZB5 Q82ZB5_ENTFA 1 422 SEQADV 3D3Y SER A -2 UNP Q82ZB5 EXPRESSION TAG SEQADV 3D3Y ASN A -1 UNP Q82ZB5 EXPRESSION TAG SEQADV 3D3Y ALA A 0 UNP Q82ZB5 EXPRESSION TAG SEQRES 1 A 425 SER ASN ALA MSE SER VAL GLN LEU VAL LYS GLY VAL ASN SEQRES 2 A 425 LEU HIS VAL ILE PRO THR GLU LYS TYR LYS THR VAL ARG SEQRES 3 A 425 LEU LEU VAL ARG PHE ASN THR ARG LEU ASN HIS GLU THR SEQRES 4 A 425 ILE THR LYS ARG THR LEU LEU SER SER LEU MSE GLU THR SEQRES 5 A 425 ASN SER LEU ASN TYR PRO ASN GLN VAL LYS LEU SER GLU SEQRES 6 A 425 ARG LEU ALA GLU LEU TYR GLY ALA SER PHE GLY ILE GLY SEQRES 7 A 425 VAL SER LYS LYS GLY ASN GLN HIS TRP PHE ASN ILE SER SEQRES 8 A 425 MSE ASN ILE VAL ASN ASP HIS TYR LEU GLN ASP SER GLN SEQRES 9 A 425 VAL LEU ALA GLU ALA VAL ASP PHE LEU LYS GLU ILE ILE SEQRES 10 A 425 PHE ALA PRO ASN ILE GLN ALA GLY GLN PHE GLU ALA GLU SEQRES 11 A 425 THR PHE GLN ARG GLU LYS GLU ASN LEU LYS ALA TYR LEU SEQRES 12 A 425 GLU SER ILE VAL GLU ASP LYS GLN THR TYR ALA SER LEU SEQRES 13 A 425 ALA LEU GLN SER VAL TYR PHE ASN GLN SER GLU ASP GLN SEQRES 14 A 425 LYS ILE PRO SER PHE GLY THR VAL ALA ALA LEU ALA GLU SEQRES 15 A 425 GLU THR ALA ALA SER LEU ALA ALA TYR TYR GLN LYS MSE SEQRES 16 A 425 LEU ALA GLU ASP GLN VAL ASP ILE PHE VAL LEU GLY ASP SEQRES 17 A 425 VAL ASN GLU ALA GLU LEU VAL PRO LEU PHE LYS GLN LEU SEQRES 18 A 425 PRO PHE THR PRO ARG GLU GLU GLY LYS ALA ALA ILE PHE SEQRES 19 A 425 TYR ASN GLN PRO ILE ARG ASN VAL ILE GLU GLU ARG THR SEQRES 20 A 425 GLU ARG GLU VAL LEU ALA GLN SER LYS LEU ASN LEU ALA SEQRES 21 A 425 TYR ASN THR ASP ILE TYR TYR GLY ASP SER TYR TYR PHE SEQRES 22 A 425 ALA LEU GLN VAL PHE ASN GLY ILE PHE GLY GLY PHE PRO SEQRES 23 A 425 HIS SER LYS LEU PHE MSE ASN VAL ARG GLU LYS GLU HIS SEQRES 24 A 425 LEU ALA TYR TYR ALA SER SER SER ILE ASP THR PHE ARG SEQRES 25 A 425 GLY PHE MSE THR VAL GLN THR GLY ILE ASP GLY LYS ASN SEQRES 26 A 425 ARG ASN GLN VAL LEU ARG LEU ILE SER THR GLU LEU GLU SEQRES 27 A 425 ASN ILE ARG LEU GLY LYS ILE ARG GLU LEU GLU ILE GLU SEQRES 28 A 425 GLN THR LYS ALA MSE LEU LYS ASN GLN TYR ILE LEU ALA SEQRES 29 A 425 LEU ASP ASN ALA GLY ALA TRP LEU GLU LYS GLU TYR LEU SEQRES 30 A 425 ASN GLU LEU MSE PRO GLN THR MSE LEU THR ALA GLU GLU SEQRES 31 A 425 TRP ILE ALA ARG ILE ASN ALA VAL THR ILE PRO GLU ILE SEQRES 32 A 425 GLN GLU VAL ALA LYS ARG LEU GLU LEU GLN ALA ILE PHE SEQRES 33 A 425 PHE LEU GLU GLY GLU THR GLU ASN ASP MODRES 3D3Y MSE A 1 MET SELENOMETHIONINE MODRES 3D3Y MSE A 47 MET SELENOMETHIONINE MODRES 3D3Y MSE A 89 MET SELENOMETHIONINE MODRES 3D3Y MSE A 192 MET SELENOMETHIONINE MODRES 3D3Y MSE A 289 MET SELENOMETHIONINE MODRES 3D3Y MSE A 312 MET SELENOMETHIONINE MODRES 3D3Y MSE A 353 MET SELENOMETHIONINE MODRES 3D3Y MSE A 378 MET SELENOMETHIONINE MODRES 3D3Y MSE A 382 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 47 8 HET MSE A 89 8 HET MSE A 192 8 HET MSE A 289 8 HET MSE A 312 8 HET MSE A 353 8 HET MSE A 378 8 HET MSE A 382 8 HET ACT A 423 4 HET ACT A 424 4 HET ACT A 425 4 HET ACT A 426 4 HET EDO A 427 4 HET EDO A 428 4 HET EDO A 429 4 HET EDO A 430 4 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 ACT 4(C2 H3 O2 1-) FORMUL 6 EDO 4(C2 H6 O2) FORMUL 10 HOH *215(H2 O) HELIX 1 1 THR A 36 ASN A 50 1 15 HELIX 2 2 ASN A 56 LEU A 67 1 12 HELIX 3 3 ASP A 94 LEU A 97 5 4 HELIX 4 4 GLN A 101 ALA A 116 1 16 HELIX 5 5 GLU A 125 ASP A 146 1 22 HELIX 6 6 ASP A 146 PHE A 160 1 15 HELIX 7 7 THR A 173 GLU A 180 1 8 HELIX 8 8 THR A 181 ASP A 196 1 16 HELIX 9 9 ASN A 207 GLN A 217 1 11 HELIX 10 10 TYR A 268 GLY A 280 1 13 HELIX 11 11 SER A 285 VAL A 291 1 7 HELIX 12 12 ASP A 319 LYS A 321 5 3 HELIX 13 13 ASN A 322 LEU A 339 1 18 HELIX 14 14 ARG A 343 LEU A 362 1 20 HELIX 15 15 ASN A 364 MSE A 378 1 15 HELIX 16 16 THR A 384 VAL A 395 1 12 HELIX 17 17 THR A 396 LEU A 407 1 12 SHEET 1 A 6 MSE A 1 VAL A 6 0 SHEET 2 A 6 VAL A 9 PRO A 15 -1 O LEU A 11 N VAL A 3 SHEET 3 A 6 GLN A 197 GLY A 204 1 O VAL A 202 N ILE A 14 SHEET 4 A 6 THR A 21 ARG A 31 -1 N ARG A 27 O ASP A 199 SHEET 5 A 6 GLN A 82 VAL A 92 -1 O ILE A 91 N VAL A 22 SHEET 6 A 6 SER A 71 LYS A 79 -1 N GLY A 73 O SER A 88 SHEET 1 B 2 ILE A 119 GLN A 120 0 SHEET 2 B 2 GLN A 123 PHE A 124 -1 O GLN A 123 N GLN A 120 SHEET 1 C 5 GLU A 241 VAL A 248 0 SHEET 2 C 5 GLU A 408 GLU A 418 1 O GLU A 416 N GLU A 245 SHEET 3 C 5 SER A 252 ASN A 259 -1 N ASN A 255 O PHE A 413 SHEET 4 C 5 PHE A 311 ILE A 318 -1 O VAL A 314 N LEU A 256 SHEET 5 C 5 TYR A 300 ASP A 306 -1 N SER A 302 O GLN A 315 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N SER A 2 1555 1555 1.33 LINK C LEU A 46 N MSE A 47 1555 1555 1.34 LINK C MSE A 47 N GLU A 48 1555 1555 1.33 LINK C SER A 88 N MSE A 89 1555 1555 1.34 LINK C MSE A 89 N ASN A 90 1555 1555 1.33 LINK C LYS A 191 N MSE A 192 1555 1555 1.34 LINK C MSE A 192 N LEU A 193 1555 1555 1.33 LINK C PHE A 288 N MSE A 289 1555 1555 1.33 LINK C MSE A 289 N ASN A 290 1555 1555 1.32 LINK C PHE A 311 N MSE A 312 1555 1555 1.32 LINK C MSE A 312 N THR A 313 1555 1555 1.33 LINK C ALA A 352 N MSE A 353 1555 1555 1.33 LINK C MSE A 353 N LEU A 354 1555 1555 1.33 LINK C LEU A 377 N MSE A 378 1555 1555 1.33 LINK C MSE A 378 N PRO A 379 1555 1555 1.34 LINK C THR A 381 N MSE A 382 1555 1555 1.34 LINK C MSE A 382 N LEU A 383 1555 1555 1.33 SITE 1 AC1 5 SER A 71 PHE A 72 SER A 88 TYR A 299 SITE 2 AC1 5 HOH A 592 SITE 1 AC2 6 ALA A 250 GLN A 251 SER A 252 GLY A 320 SITE 2 AC2 6 HOH A 498 HOH A 556 SITE 1 AC3 5 GLN A 57 SER A 61 TYR A 299 TYR A 300 SITE 2 AC3 5 HOH A 453 SITE 1 AC4 4 GLN A 156 SER A 304 THR A 313 HOH A 596 SITE 1 AC5 3 THR A 16 GLU A 17 TRP A 368 SITE 1 AC6 4 HIS A 296 TYR A 299 ASP A 319 HOH A 485 SITE 1 AC7 6 ALA A 187 GLN A 190 ASP A 266 SER A 267 SITE 2 AC7 6 HOH A 447 HOH A 548 SITE 1 AC8 6 LEU A 193 ALA A 194 PHE A 220 THR A 221 SITE 2 AC8 6 ARG A 223 HOH A 510 CRYST1 122.437 122.437 69.003 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008167 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008167 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014492 0.00000