HEADER TRANSFERASE 13-MAY-08 3D40 TITLE CRYSTAL STRUCTURE OF FOSFOMYCIN RESISTANCE KINASE FOMA FROM TITLE 2 STREPTOMYCES WEDMORENSIS COMPLEXED WITH DIPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FOMA PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES WEDMORENSIS; SOURCE 3 GENE: FOMA; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET28B KEYWDS FOSFOMYCIN, ANTIBIOTIC RESISTANCE, KINASE, PHOSPHORYL TRANSFER, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.PAKHOMOVA,S.G.BARTLETT,A.AUGUSTUS,T.KUZUYAMA,M.E.NEWCOMER REVDAT 6 03-APR-24 3D40 1 REMARK REVDAT 5 21-FEB-24 3D40 1 REMARK SEQADV REVDAT 4 24-FEB-09 3D40 1 VERSN REVDAT 3 28-OCT-08 3D40 1 JRNL REVDAT 2 09-SEP-08 3D40 1 JRNL REVDAT 1 12-AUG-08 3D40 0 JRNL AUTH S.PAKHOMOVA,S.G.BARTLETT,A.AUGUSTUS,T.KUZUYAMA,M.E.NEWCOMER JRNL TITL CRYSTAL STRUCTURE OF FOSFOMYCIN RESISTANCE KINASE FOMA FROM JRNL TITL 2 STREPTOMYCES WEDMORENSIS. JRNL REF J.BIOL.CHEM. V. 283 28518 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18701452 JRNL DOI 10.1074/JBC.M803709200 REMARK 2 REMARK 2 RESOLUTION. 1.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 50201 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.600 REMARK 3 FREE R VALUE TEST SET COUNT : 834 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.53 REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 REFLECTION IN BIN (WORKING SET) : 2784 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1907 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 231 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.061 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.065 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.040 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.221 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2001 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2716 ; 1.738 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 250 ; 5.409 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;29.600 ;21.765 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 325 ;13.526 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;14.671 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 311 ; 0.123 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1501 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 920 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1397 ; 0.318 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 194 ; 0.158 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 60 ; 0.169 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.175 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1288 ; 1.250 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2019 ; 1.917 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 793 ; 2.803 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 697 ; 4.418 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 3D40 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-08. REMARK 100 THE DEPOSITION ID IS D_1000047563. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CAMD REMARK 200 BEAMLINE : GCPCC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.38079 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52986 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.530 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 34.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.51000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: MODEL OF SEMET FOMA FORM BASED ON MAD DATA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% PEG 3350, 0.1 M TRI-AMMONIUM REMARK 280 CITRATE, 0.1 M MES, PH 7.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.69733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.34867 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 26.34867 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 52.69733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 52.69733 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 GLY A 57 REMARK 465 HIS A 58 REMARK 465 GLY A 59 REMARK 465 ALA A 60 REMARK 465 ILE A 61 REMARK 465 ARG A 62 REMARK 465 ASP A 63 REMARK 465 HIS A 64 REMARK 465 ASP A 65 REMARK 465 SER A 66 REMARK 465 THR A 67 REMARK 465 HIS A 68 REMARK 465 GLY A 179 REMARK 465 ALA A 180 REMARK 465 GLY A 181 REMARK 465 TRP A 207 REMARK 465 ASP A 208 REMARK 465 ALA A 209 REMARK 465 THR A 210 REMARK 465 THR A 263 REMARK 465 ALA A 264 REMARK 465 SER A 265 REMARK 465 ALA A 266 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A -8 OG REMARK 470 LYS A 18 CG CD CE NZ REMARK 470 ASP A 178 CG OD1 OD2 REMARK 470 GLU A 206 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 204 O HOH A 3041 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2960 O HOH A 2960 6555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 15 13.97 -141.39 REMARK 500 TYR A 43 40.61 -90.95 REMARK 500 SER A 193 78.85 -157.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DPO A 2811 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3D41 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FOSFOMYCIN RESISTANCE KINASE FOMA FROM REMARK 900 STREPTOMYCES WEDMORENSIS COMPLEXED WITH MGAMPPNP AND FOSFOMYCIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS STATE THAT THE RESEQUENCING OF THE PROTEIN CONFIRMED REMARK 999 RESIDUE 31 IS ARG. DBREF 3D40 A 1 266 UNP Q56187 Q56187_STRWE 1 266 SEQADV 3D40 MET A -19 UNP Q56187 EXPRESSION TAG SEQADV 3D40 GLY A -18 UNP Q56187 EXPRESSION TAG SEQADV 3D40 SER A -17 UNP Q56187 EXPRESSION TAG SEQADV 3D40 SER A -16 UNP Q56187 EXPRESSION TAG SEQADV 3D40 HIS A -15 UNP Q56187 EXPRESSION TAG SEQADV 3D40 HIS A -14 UNP Q56187 EXPRESSION TAG SEQADV 3D40 HIS A -13 UNP Q56187 EXPRESSION TAG SEQADV 3D40 HIS A -12 UNP Q56187 EXPRESSION TAG SEQADV 3D40 HIS A -11 UNP Q56187 EXPRESSION TAG SEQADV 3D40 HIS A -10 UNP Q56187 EXPRESSION TAG SEQADV 3D40 SER A -9 UNP Q56187 EXPRESSION TAG SEQADV 3D40 SER A -8 UNP Q56187 EXPRESSION TAG SEQADV 3D40 GLY A -7 UNP Q56187 EXPRESSION TAG SEQADV 3D40 LEU A -6 UNP Q56187 EXPRESSION TAG SEQADV 3D40 VAL A -5 UNP Q56187 EXPRESSION TAG SEQADV 3D40 PRO A -4 UNP Q56187 EXPRESSION TAG SEQADV 3D40 ARG A -3 UNP Q56187 EXPRESSION TAG SEQADV 3D40 GLY A -2 UNP Q56187 EXPRESSION TAG SEQADV 3D40 SER A -1 UNP Q56187 EXPRESSION TAG SEQADV 3D40 HIS A 0 UNP Q56187 EXPRESSION TAG SEQADV 3D40 ARG A 31 UNP Q56187 PRO 31 SEE REMARK 999 SEQRES 1 A 286 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 286 LEU VAL PRO ARG GLY SER HIS MET THR PRO ASP PHE LEU SEQRES 3 A 286 ALA ILE LYS VAL GLY GLY SER LEU PHE SER ARG LYS ASP SEQRES 4 A 286 GLU PRO GLY SER LEU ASP ASP ASP ALA VAL THR ARG PHE SEQRES 5 A 286 ALA ARG ASN PHE ALA ARG LEU ALA GLU THR TYR ARG GLY SEQRES 6 A 286 ARG MET VAL LEU ILE SER GLY GLY GLY ALA PHE GLY HIS SEQRES 7 A 286 GLY ALA ILE ARG ASP HIS ASP SER THR HIS ALA PHE SER SEQRES 8 A 286 LEU ALA GLY LEU THR GLU ALA THR PHE GLU VAL LYS LYS SEQRES 9 A 286 ARG TRP ALA GLU LYS LEU ARG GLY ILE GLY VAL ASP ALA SEQRES 10 A 286 PHE PRO LEU GLN LEU ALA ALA MET CYS THR LEU ARG ASN SEQRES 11 A 286 GLY ILE PRO GLN LEU ARG SER GLU VAL LEU ARG ASP VAL SEQRES 12 A 286 LEU ASP HIS GLY ALA LEU PRO VAL LEU ALA GLY ASP ALA SEQRES 13 A 286 LEU PHE ASP GLU HIS GLY LYS LEU TRP ALA PHE SER SER SEQRES 14 A 286 ASP ARG VAL PRO GLU VAL LEU LEU PRO MET VAL GLU GLY SEQRES 15 A 286 ARG LEU ARG VAL VAL THR LEU THR ASP VAL ASP GLY ILE SEQRES 16 A 286 VAL THR ASP GLY ALA GLY GLY ASP THR ILE LEU PRO GLU SEQRES 17 A 286 VAL ASP ALA ARG SER PRO GLU GLN ALA TYR ALA ALA LEU SEQRES 18 A 286 TRP GLY SER SER GLU TRP ASP ALA THR GLY ALA MET HIS SEQRES 19 A 286 THR LYS LEU ASP ALA LEU VAL THR CYS ALA ARG ARG GLY SEQRES 20 A 286 ALA GLU CYS PHE ILE MET ARG GLY ASP PRO GLY SER ASP SEQRES 21 A 286 LEU GLU PHE LEU THR ALA PRO PHE SER SER TRP PRO ALA SEQRES 22 A 286 HIS VAL ARG SER THR ARG ILE THR THR THR ALA SER ALA HET DPO A2811 9 HETNAM DPO DIPHOSPHATE FORMUL 2 DPO O7 P2 4- FORMUL 3 HOH *231(H2 O) HELIX 1 1 GLY A 12 PHE A 15 5 4 HELIX 2 2 ASP A 25 TYR A 43 1 19 HELIX 3 3 LEU A 72 ILE A 93 1 22 HELIX 4 4 GLN A 101 ALA A 104 5 4 HELIX 5 5 GLU A 118 HIS A 126 1 9 HELIX 6 6 SER A 148 ASP A 150 5 3 HELIX 7 7 ARG A 151 LEU A 156 1 6 HELIX 8 8 PRO A 194 SER A 204 1 11 HELIX 9 9 GLY A 211 ARG A 226 1 16 HELIX 10 10 LEU A 241 ALA A 246 5 6 HELIX 11 11 PRO A 247 TRP A 251 5 5 SHEET 1 A 8 ALA A 97 PRO A 99 0 SHEET 2 A 8 LEU A 129 ALA A 133 1 O LEU A 129 N PHE A 98 SHEET 3 A 8 MET A 47 SER A 51 1 N LEU A 49 O LEU A 132 SHEET 4 A 8 PHE A 5 VAL A 10 1 N ILE A 8 O ILE A 50 SHEET 5 A 8 LEU A 164 THR A 170 1 O VAL A 167 N LYS A 9 SHEET 6 A 8 GLU A 229 ARG A 234 1 O PHE A 231 N THR A 168 SHEET 7 A 8 THR A 258 THR A 261 -1 O ILE A 260 N CYS A 230 SHEET 8 A 8 GLU A 188 ASP A 190 1 N VAL A 189 O ARG A 259 SHEET 1 B 2 CYS A 106 ARG A 109 0 SHEET 2 B 2 ILE A 112 LEU A 115 -1 O GLN A 114 N THR A 107 SHEET 1 C 2 ASP A 135 PHE A 138 0 SHEET 2 C 2 LEU A 144 PHE A 147 -1 O PHE A 147 N ASP A 135 SHEET 1 D 2 VAL A 176 THR A 177 0 SHEET 2 D 2 THR A 184 ILE A 185 -1 O THR A 184 N THR A 177 SITE 1 AC1 10 LYS A 9 GLY A 11 GLY A 12 GLY A 52 SITE 2 AC1 10 GLY A 53 ASP A 150 ALA A 212 LYS A 216 SITE 3 AC1 10 HOH A3027 HOH A3028 CRYST1 88.361 88.361 79.046 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011317 0.006534 0.000000 0.00000 SCALE2 0.000000 0.013068 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012651 0.00000