data_3DFU # _entry.id 3DFU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DFU pdb_00003dfu 10.2210/pdb3dfu/pdb RCSB RCSB047985 ? ? WWPDB D_1000047985 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 377822 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 3DFU _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-06-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of Protein of Unknown Function from the 6-Phosphogluconate Dehydrogenase-Like Family (NP_601885.1) from CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO at 2.07 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 3DFU _cell.length_a 155.790 _cell.length_b 47.070 _cell.length_c 63.240 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DFU _symmetry.Int_Tables_number 18 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized Protein from 6-Phosphogluconate Dehydrogenase-Like Family' 25779.957 2 ? ? ? ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 water nat water 18.015 249 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)QAPRLRVGIFDDGSSTVN(MSE)AEKLDSVGHYVTVLHAPEDIRDFELVVIDAHGVEGYVEKLSAFARRGQ (MSE)FLHTSLTHGITV(MSE)DPLETSGGIV(MSE)SAHPIGQDRWVASALDELGETIVGLLVGELGGSIVEIADDKRA QLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDIV(MSE)DSAQQFQALPSLDEVIAQYDSINNPGRQRLFRDLARRQ AEISRAQDIELWAIQKEDR ; _entity_poly.pdbx_seq_one_letter_code_can ;GMQAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPEDIRDFELVVIDAHGVEGYVEKLSAFARRGQMFLHTSLTHGI TVMDPLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFL DEFLGDPDVTSDIVMDSAQQFQALPSLDEVIAQYDSINNPGRQRLFRDLARRQAEISRAQDIELWAIQKEDR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 377822 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 GLN n 1 4 ALA n 1 5 PRO n 1 6 ARG n 1 7 LEU n 1 8 ARG n 1 9 VAL n 1 10 GLY n 1 11 ILE n 1 12 PHE n 1 13 ASP n 1 14 ASP n 1 15 GLY n 1 16 SER n 1 17 SER n 1 18 THR n 1 19 VAL n 1 20 ASN n 1 21 MSE n 1 22 ALA n 1 23 GLU n 1 24 LYS n 1 25 LEU n 1 26 ASP n 1 27 SER n 1 28 VAL n 1 29 GLY n 1 30 HIS n 1 31 TYR n 1 32 VAL n 1 33 THR n 1 34 VAL n 1 35 LEU n 1 36 HIS n 1 37 ALA n 1 38 PRO n 1 39 GLU n 1 40 ASP n 1 41 ILE n 1 42 ARG n 1 43 ASP n 1 44 PHE n 1 45 GLU n 1 46 LEU n 1 47 VAL n 1 48 VAL n 1 49 ILE n 1 50 ASP n 1 51 ALA n 1 52 HIS n 1 53 GLY n 1 54 VAL n 1 55 GLU n 1 56 GLY n 1 57 TYR n 1 58 VAL n 1 59 GLU n 1 60 LYS n 1 61 LEU n 1 62 SER n 1 63 ALA n 1 64 PHE n 1 65 ALA n 1 66 ARG n 1 67 ARG n 1 68 GLY n 1 69 GLN n 1 70 MSE n 1 71 PHE n 1 72 LEU n 1 73 HIS n 1 74 THR n 1 75 SER n 1 76 LEU n 1 77 THR n 1 78 HIS n 1 79 GLY n 1 80 ILE n 1 81 THR n 1 82 VAL n 1 83 MSE n 1 84 ASP n 1 85 PRO n 1 86 LEU n 1 87 GLU n 1 88 THR n 1 89 SER n 1 90 GLY n 1 91 GLY n 1 92 ILE n 1 93 VAL n 1 94 MSE n 1 95 SER n 1 96 ALA n 1 97 HIS n 1 98 PRO n 1 99 ILE n 1 100 GLY n 1 101 GLN n 1 102 ASP n 1 103 ARG n 1 104 TRP n 1 105 VAL n 1 106 ALA n 1 107 SER n 1 108 ALA n 1 109 LEU n 1 110 ASP n 1 111 GLU n 1 112 LEU n 1 113 GLY n 1 114 GLU n 1 115 THR n 1 116 ILE n 1 117 VAL n 1 118 GLY n 1 119 LEU n 1 120 LEU n 1 121 VAL n 1 122 GLY n 1 123 GLU n 1 124 LEU n 1 125 GLY n 1 126 GLY n 1 127 SER n 1 128 ILE n 1 129 VAL n 1 130 GLU n 1 131 ILE n 1 132 ALA n 1 133 ASP n 1 134 ASP n 1 135 LYS n 1 136 ARG n 1 137 ALA n 1 138 GLN n 1 139 LEU n 1 140 ALA n 1 141 ALA n 1 142 ALA n 1 143 LEU n 1 144 THR n 1 145 TYR n 1 146 ALA n 1 147 GLY n 1 148 PHE n 1 149 LEU n 1 150 SER n 1 151 THR n 1 152 LEU n 1 153 GLN n 1 154 ARG n 1 155 ASP n 1 156 ALA n 1 157 SER n 1 158 TYR n 1 159 PHE n 1 160 LEU n 1 161 ASP n 1 162 GLU n 1 163 PHE n 1 164 LEU n 1 165 GLY n 1 166 ASP n 1 167 PRO n 1 168 ASP n 1 169 VAL n 1 170 THR n 1 171 SER n 1 172 ASP n 1 173 ILE n 1 174 VAL n 1 175 MSE n 1 176 ASP n 1 177 SER n 1 178 ALA n 1 179 GLN n 1 180 GLN n 1 181 PHE n 1 182 GLN n 1 183 ALA n 1 184 LEU n 1 185 PRO n 1 186 SER n 1 187 LEU n 1 188 ASP n 1 189 GLU n 1 190 VAL n 1 191 ILE n 1 192 ALA n 1 193 GLN n 1 194 TYR n 1 195 ASP n 1 196 SER n 1 197 ILE n 1 198 ASN n 1 199 ASN n 1 200 PRO n 1 201 GLY n 1 202 ARG n 1 203 GLN n 1 204 ARG n 1 205 LEU n 1 206 PHE n 1 207 ARG n 1 208 ASP n 1 209 LEU n 1 210 ALA n 1 211 ARG n 1 212 ARG n 1 213 GLN n 1 214 ALA n 1 215 GLU n 1 216 ILE n 1 217 SER n 1 218 ARG n 1 219 ALA n 1 220 GLN n 1 221 ASP n 1 222 ILE n 1 223 GLU n 1 224 LEU n 1 225 TRP n 1 226 ALA n 1 227 ILE n 1 228 GLN n 1 229 LYS n 1 230 GLU n 1 231 ASP n 1 232 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'Brevibacterium flavum' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP_601885.1, Cgl2689, cg2976' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Corynebacterium glutamicum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1718 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 13032 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8NM90_CORGL _struct_ref.pdbx_db_accession Q8NM90 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPEDIRDFELVVIDAHGVEGYVEKLSAFARRGQMFLHTSLTHGITV MDPLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDE FLGDPDVTSDIVMDSAQQFQALPSLDEVIAQYDSINNPGRQRLFRDLARRQAEISRAQDIELWAIQKEDR ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DFU A 3 ? 232 ? Q8NM90 2 ? 231 ? 2 231 2 1 3DFU B 3 ? 232 ? Q8NM90 2 ? 231 ? 2 231 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 3DFU GLY A 1 ? UNP Q8NM90 ? ? 'expression tag' 0 1 1 3DFU MSE A 2 ? UNP Q8NM90 ? ? 'expression tag' 1 2 2 3DFU GLY B 1 ? UNP Q8NM90 ? ? 'expression tag' 0 3 2 3DFU MSE B 2 ? UNP Q8NM90 ? ? 'expression tag' 1 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 3DFU # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.25 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '20.0% polyethylene glycol 6000, 1.0M lithium chloride, 0.1M MES pH 6.0, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2008-05-14 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97960 1.0 3 0.97905 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.91837,0.97960,0.97905 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 3DFU _reflns.d_resolution_high 2.07 _reflns.d_resolution_low 27.951 _reflns.number_obs 29174 _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_netI_over_sigmaI 12.280 _reflns.percent_possible_obs 98.700 _reflns.B_iso_Wilson_estimate 30.352 _reflns.observed_criterion_sigma_I -3.00 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.07 2.14 9976 ? 5190 0.433 2.2 ? ? ? ? ? 98.70 1 1 2.14 2.23 10891 ? 5663 0.306 3.0 ? ? ? ? ? 98.90 2 1 2.23 2.33 10393 ? 5383 0.236 3.9 ? ? ? ? ? 99.00 3 1 2.33 2.45 10298 ? 5331 0.177 4.9 ? ? ? ? ? 99.30 4 1 2.45 2.61 11035 ? 5701 0.132 6.5 ? ? ? ? ? 99.00 5 1 2.61 2.81 10430 ? 5397 0.096 8.7 ? ? ? ? ? 99.00 6 1 2.81 3.09 10403 ? 5361 0.064 12.1 ? ? ? ? ? 99.00 7 1 3.09 3.53 10435 ? 5379 0.037 19.0 ? ? ? ? ? 98.80 8 1 3.53 4.44 10657 ? 5444 0.023 28.5 ? ? ? ? ? 98.60 9 1 4.44 ? 10767 ? 5433 0.018 34.0 ? ? ? ? ? 97.00 10 1 # _refine.entry_id 3DFU _refine.ls_d_res_high 2.070 _refine.ls_d_res_low 27.951 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.430 _refine.ls_number_reflns_obs 29123 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. GOL MOLECULE FROM THE CRYO SOLUTION IS MODELED. ; _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.223 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1479 _refine.B_iso_mean 31.660 _refine.aniso_B[1][1] -1.740 _refine.aniso_B[2][2] 2.000 _refine.aniso_B[3][3] -0.260 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.933 _refine.pdbx_overall_ESU_R 0.221 _refine.pdbx_overall_ESU_R_Free 0.174 _refine.overall_SU_ML 0.128 _refine.overall_SU_B 9.323 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3445 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 3700 _refine_hist.d_res_high 2.070 _refine_hist.d_res_low 27.951 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 3590 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 2340 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4891 1.525 1.957 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 5731 1.383 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 476 3.561 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 164 31.513 24.573 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 587 11.265 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22 16.730 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 567 0.093 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 4094 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 716 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 686 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 2293 0.143 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1764 0.148 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1737 0.073 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 219 0.095 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 7 0.066 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 37 0.149 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 8 0.035 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2723 1.138 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 944 0.163 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3679 1.689 4.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1396 3.290 6.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1200 4.291 8.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 'LOOSE POSITIONAL' A 2703 0.750 5.000 1 'X-RAY DIFFRACTION' 1 ? ? ? 1 'LOOSE THERMAL' A 2703 2.260 10.000 1 'X-RAY DIFFRACTION' 2 ? ? ? # _refine_ls_shell.d_res_high 2.068 _refine_ls_shell.d_res_low 2.122 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.530 _refine_ls_shell.number_reflns_R_work 2020 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.239 _refine_ls_shell.R_factor_R_free 0.252 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 104 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2124 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 1 A 5 A 228 6 . . PRO GLN A 4 A 227 1 ? 2 1 B 5 B 228 6 . . PRO GLN B 4 B 227 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 3DFU _struct.title 'CRYSTAL STRUCTURE OF A PUTATIVE ROSSMANN-LIKE DEHYDROGENASE (CGL2689) FROM CORYNEBACTERIUM GLUTAMICUM AT 2.07 A RESOLUTION' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;PUTATIVE ROSSMANN-LIKE DEHYDROGENASE, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-2, OXIDOREDUCTASE ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 3DFU # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.details 'AUTHORS STATE THAT CRYSTAL PACKING ANALYSIS SUPPORTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 20 ? VAL A 28 ? ASN A 19 VAL A 27 1 ? 9 HELX_P HELX_P2 2 ALA A 37 ? PHE A 44 ? ALA A 36 PHE A 43 5 ? 8 HELX_P HELX_P3 3 GLY A 53 ? ALA A 63 ? GLY A 52 ALA A 62 1 ? 11 HELX_P HELX_P4 4 GLY A 79 ? VAL A 82 ? GLY A 78 VAL A 81 5 ? 4 HELX_P HELX_P5 5 MSE A 83 ? SER A 89 ? MSE A 82 SER A 88 1 ? 7 HELX_P HELX_P6 6 ASP A 110 ? LEU A 124 ? ASP A 109 LEU A 123 1 ? 15 HELX_P HELX_P7 7 ALA A 132 ? ASP A 134 ? ALA A 131 ASP A 133 5 ? 3 HELX_P HELX_P8 8 LYS A 135 ? GLY A 165 ? LYS A 134 GLY A 164 1 ? 31 HELX_P HELX_P9 9 ASP A 166 ? GLN A 180 ? ASP A 165 GLN A 179 1 ? 15 HELX_P HELX_P10 10 SER A 186 ? SER A 196 ? SER A 185 SER A 195 1 ? 11 HELX_P HELX_P11 11 ASN A 199 ? ARG A 218 ? ASN A 198 ARG A 217 1 ? 20 HELX_P HELX_P12 12 ALA A 219 ? LYS A 229 ? ALA A 218 LYS A 228 1 ? 11 HELX_P HELX_P13 13 ASN B 20 ? VAL B 28 ? ASN B 19 VAL B 27 1 ? 9 HELX_P HELX_P14 14 ALA B 37 ? ARG B 42 ? ALA B 36 ARG B 41 5 ? 6 HELX_P HELX_P15 15 GLY B 53 ? SER B 62 ? GLY B 52 SER B 61 1 ? 10 HELX_P HELX_P16 16 ALA B 63 ? ALA B 65 ? ALA B 62 ALA B 64 5 ? 3 HELX_P HELX_P17 17 GLY B 79 ? VAL B 82 ? GLY B 78 VAL B 81 5 ? 4 HELX_P HELX_P18 18 MSE B 83 ? SER B 89 ? MSE B 82 SER B 88 1 ? 7 HELX_P HELX_P19 19 ASP B 110 ? LEU B 124 ? ASP B 109 LEU B 123 1 ? 15 HELX_P HELX_P20 20 ALA B 132 ? ASP B 134 ? ALA B 131 ASP B 133 5 ? 3 HELX_P HELX_P21 21 LYS B 135 ? GLY B 165 ? LYS B 134 GLY B 164 1 ? 31 HELX_P HELX_P22 22 ASP B 166 ? GLN B 180 ? ASP B 165 GLN B 179 1 ? 15 HELX_P HELX_P23 23 SER B 186 ? ILE B 197 ? SER B 185 ILE B 196 1 ? 12 HELX_P HELX_P24 24 ASN B 199 ? ARG B 218 ? ASN B 198 ARG B 217 1 ? 20 HELX_P HELX_P25 25 ALA B 219 ? GLN B 228 ? ALA B 218 GLN B 227 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 20 C ? ? ? 1_555 A MSE 21 N ? ? A ASN 19 A MSE 20 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 21 C ? ? ? 1_555 A ALA 22 N ? ? A MSE 20 A ALA 21 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A GLN 69 C ? ? ? 1_555 A MSE 70 N ? ? A GLN 68 A MSE 69 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale4 covale both ? A MSE 70 C ? ? ? 1_555 A PHE 71 N ? ? A MSE 69 A PHE 70 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale5 covale both ? A VAL 82 C ? ? ? 1_555 A MSE 83 N ? ? A VAL 81 A MSE 82 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale6 covale both ? A MSE 83 C ? ? ? 1_555 A ASP 84 N ? ? A MSE 82 A ASP 83 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale7 covale both ? A VAL 93 C ? ? ? 1_555 A MSE 94 N ? ? A VAL 92 A MSE 93 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale8 covale both ? A MSE 94 C ? ? ? 1_555 A SER 95 N ? ? A MSE 93 A SER 94 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale9 covale both ? A VAL 174 C ? ? ? 1_555 A MSE 175 N ? ? A VAL 173 A MSE 174 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale10 covale both ? A MSE 175 C ? ? ? 1_555 A ASP 176 N ? ? A MSE 174 A ASP 175 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale11 covale both ? B MSE 2 C ? ? ? 1_555 B GLN 3 N ? ? B MSE 1 B GLN 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale12 covale both ? B ASN 20 C ? ? ? 1_555 B MSE 21 N ? ? B ASN 19 B MSE 20 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale13 covale both ? B MSE 21 C ? ? ? 1_555 B ALA 22 N ? ? B MSE 20 B ALA 21 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale14 covale both ? B GLN 69 C ? ? ? 1_555 B MSE 70 N ? ? B GLN 68 B MSE 69 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale15 covale both ? B MSE 70 C ? ? ? 1_555 B PHE 71 N ? ? B MSE 69 B PHE 70 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale16 covale both ? B VAL 82 C ? ? ? 1_555 B MSE 83 N ? ? B VAL 81 B MSE 82 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale17 covale both ? B MSE 83 C ? ? ? 1_555 B ASP 84 N ? ? B MSE 82 B ASP 83 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale18 covale both ? B VAL 93 C ? ? ? 1_555 B MSE 94 N ? ? B VAL 92 B MSE 93 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale19 covale both ? B MSE 94 C ? ? ? 1_555 B SER 95 N ? ? B MSE 93 B SER 94 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale20 covale both ? B VAL 174 C ? ? ? 1_555 B MSE 175 N ? ? B VAL 173 B MSE 174 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale21 covale both ? B MSE 175 C ? ? ? 1_555 B ASP 176 N ? ? B MSE 174 B ASP 175 1_555 ? ? ? ? ? ? ? 1.337 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? anti-parallel B 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 31 ? VAL A 34 ? TYR A 30 VAL A 33 A 2 ARG A 8 ? PHE A 12 ? ARG A 7 PHE A 11 A 3 LEU A 46 ? ILE A 49 ? LEU A 45 ILE A 48 A 4 MSE A 70 ? HIS A 73 ? MSE A 69 HIS A 72 A 5 ILE A 92 ? GLY A 100 ? ILE A 91 GLY A 99 A 6 ARG A 103 ? ALA A 108 ? ARG A 102 ALA A 107 A 7 SER A 127 ? ILE A 128 ? SER A 126 ILE A 127 B 1 TYR B 31 ? VAL B 34 ? TYR B 30 VAL B 33 B 2 ARG B 8 ? ASP B 13 ? ARG B 7 ASP B 12 B 3 LEU B 46 ? ASP B 50 ? LEU B 45 ASP B 49 B 4 MSE B 70 ? HIS B 73 ? MSE B 69 HIS B 72 B 5 ILE B 92 ? GLY B 100 ? ILE B 91 GLY B 99 B 6 ARG B 103 ? ALA B 108 ? ARG B 102 ALA B 107 B 7 SER B 127 ? ILE B 128 ? SER B 126 ILE B 127 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 31 ? O TYR A 30 N VAL A 9 ? N VAL A 8 A 2 3 N PHE A 12 ? N PHE A 11 O VAL A 48 ? O VAL A 47 A 3 4 N VAL A 47 ? N VAL A 46 O MSE A 70 ? O MSE A 69 A 4 5 N PHE A 71 ? N PHE A 70 O ILE A 92 ? O ILE A 91 A 5 6 N HIS A 97 ? N HIS A 96 O VAL A 105 ? O VAL A 104 A 6 7 N TRP A 104 ? N TRP A 103 O SER A 127 ? O SER A 126 B 1 2 O TYR B 31 ? O TYR B 30 N VAL B 9 ? N VAL B 8 B 2 3 N PHE B 12 ? N PHE B 11 O VAL B 48 ? O VAL B 47 B 3 4 N ILE B 49 ? N ILE B 48 O LEU B 72 ? O LEU B 71 B 4 5 N PHE B 71 ? N PHE B 70 O ILE B 92 ? O ILE B 91 B 5 6 N ILE B 99 ? N ILE B 98 O ARG B 103 ? O ARG B 102 B 6 7 N TRP B 104 ? N TRP B 103 O SER B 127 ? O SER B 126 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id GOL _struct_site.pdbx_auth_seq_id 232 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE GOL A 232' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 PRO A 5 ? PRO A 4 . ? 1_555 ? 2 AC1 5 LEU A 112 ? LEU A 111 . ? 2_765 ? 3 AC1 5 LEU A 120 ? LEU A 119 . ? 1_555 ? 4 AC1 5 GLU A 123 ? GLU A 122 . ? 1_555 ? 5 AC1 5 HOH D . ? HOH A 356 . ? 1_555 ? # _atom_sites.entry_id 3DFU _atom_sites.fract_transf_matrix[1][1] 0.006419 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021245 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015813 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 GLN 3 2 2 GLN GLN A . n A 1 4 ALA 4 3 3 ALA ALA A . n A 1 5 PRO 5 4 4 PRO PRO A . n A 1 6 ARG 6 5 5 ARG ARG A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 ARG 8 7 7 ARG ARG A . n A 1 9 VAL 9 8 8 VAL VAL A . n A 1 10 GLY 10 9 9 GLY GLY A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 PHE 12 11 11 PHE PHE A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 ASP 14 13 13 ASP ASP A . n A 1 15 GLY 15 14 14 GLY GLY A . n A 1 16 SER 16 15 15 SER SER A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 THR 18 17 17 THR THR A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 ASN 20 19 19 ASN ASN A . n A 1 21 MSE 21 20 20 MSE MSE A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 LYS 24 23 23 LYS LYS A . n A 1 25 LEU 25 24 24 LEU LEU A . n A 1 26 ASP 26 25 25 ASP ASP A . n A 1 27 SER 27 26 26 SER SER A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 HIS 30 29 29 HIS HIS A . n A 1 31 TYR 31 30 30 TYR TYR A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 LEU 35 34 34 LEU LEU A . n A 1 36 HIS 36 35 35 HIS HIS A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 PRO 38 37 37 PRO PRO A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 ASP 40 39 39 ASP ASP A . n A 1 41 ILE 41 40 40 ILE ILE A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 ASP 43 42 42 ASP ASP A . n A 1 44 PHE 44 43 43 PHE PHE A . n A 1 45 GLU 45 44 44 GLU GLU A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 VAL 47 46 46 VAL VAL A . n A 1 48 VAL 48 47 47 VAL VAL A . n A 1 49 ILE 49 48 48 ILE ILE A . n A 1 50 ASP 50 49 49 ASP ASP A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 HIS 52 51 51 HIS HIS A . n A 1 53 GLY 53 52 52 GLY GLY A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 GLU 55 54 54 GLU GLU A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 TYR 57 56 56 TYR TYR A . n A 1 58 VAL 58 57 57 VAL VAL A . n A 1 59 GLU 59 58 58 GLU GLU A . n A 1 60 LYS 60 59 59 LYS LYS A . n A 1 61 LEU 61 60 60 LEU LEU A . n A 1 62 SER 62 61 61 SER SER A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 PHE 64 63 63 PHE PHE A . n A 1 65 ALA 65 64 64 ALA ALA A . n A 1 66 ARG 66 65 65 ARG ARG A . n A 1 67 ARG 67 66 66 ARG ARG A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 GLN 69 68 68 GLN GLN A . n A 1 70 MSE 70 69 69 MSE MSE A . n A 1 71 PHE 71 70 70 PHE PHE A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 HIS 73 72 72 HIS HIS A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 SER 75 74 74 SER SER A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 THR 77 76 76 THR THR A . n A 1 78 HIS 78 77 77 HIS HIS A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 MSE 83 82 82 MSE MSE A . n A 1 84 ASP 84 83 83 ASP ASP A . n A 1 85 PRO 85 84 84 PRO PRO A . n A 1 86 LEU 86 85 85 LEU LEU A . n A 1 87 GLU 87 86 86 GLU GLU A . n A 1 88 THR 88 87 87 THR THR A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 GLY 90 89 89 GLY GLY A . n A 1 91 GLY 91 90 90 GLY GLY A . n A 1 92 ILE 92 91 91 ILE ILE A . n A 1 93 VAL 93 92 92 VAL VAL A . n A 1 94 MSE 94 93 93 MSE MSE A . n A 1 95 SER 95 94 94 SER SER A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 HIS 97 96 96 HIS HIS A . n A 1 98 PRO 98 97 97 PRO PRO A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 GLN 101 100 100 GLN GLN A . n A 1 102 ASP 102 101 101 ASP ASP A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 TRP 104 103 103 TRP TRP A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 ALA 106 105 105 ALA ALA A . n A 1 107 SER 107 106 106 SER SER A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 GLY 113 112 112 GLY GLY A . n A 1 114 GLU 114 113 113 GLU GLU A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 ILE 116 115 115 ILE ILE A . n A 1 117 VAL 117 116 116 VAL VAL A . n A 1 118 GLY 118 117 117 GLY GLY A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 LEU 120 119 119 LEU LEU A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 GLY 122 121 121 GLY GLY A . n A 1 123 GLU 123 122 122 GLU GLU A . n A 1 124 LEU 124 123 123 LEU LEU A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 SER 127 126 126 SER SER A . n A 1 128 ILE 128 127 127 ILE ILE A . n A 1 129 VAL 129 128 128 VAL VAL A . n A 1 130 GLU 130 129 129 GLU GLU A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 ALA 132 131 131 ALA ALA A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 ASP 134 133 133 ASP ASP A . n A 1 135 LYS 135 134 134 LYS LYS A . n A 1 136 ARG 136 135 135 ARG ARG A . n A 1 137 ALA 137 136 136 ALA ALA A . n A 1 138 GLN 138 137 137 GLN GLN A . n A 1 139 LEU 139 138 138 LEU LEU A . n A 1 140 ALA 140 139 139 ALA ALA A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ALA 142 141 141 ALA ALA A . n A 1 143 LEU 143 142 142 LEU LEU A . n A 1 144 THR 144 143 143 THR THR A . n A 1 145 TYR 145 144 144 TYR TYR A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 PHE 148 147 147 PHE PHE A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 SER 150 149 149 SER SER A . n A 1 151 THR 151 150 150 THR THR A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 GLN 153 152 152 GLN GLN A . n A 1 154 ARG 154 153 153 ARG ARG A . n A 1 155 ASP 155 154 154 ASP ASP A . n A 1 156 ALA 156 155 155 ALA ALA A . n A 1 157 SER 157 156 156 SER SER A . n A 1 158 TYR 158 157 157 TYR TYR A . n A 1 159 PHE 159 158 158 PHE PHE A . n A 1 160 LEU 160 159 159 LEU LEU A . n A 1 161 ASP 161 160 160 ASP ASP A . n A 1 162 GLU 162 161 161 GLU GLU A . n A 1 163 PHE 163 162 162 PHE PHE A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 GLY 165 164 164 GLY GLY A . n A 1 166 ASP 166 165 165 ASP ASP A . n A 1 167 PRO 167 166 166 PRO PRO A . n A 1 168 ASP 168 167 167 ASP ASP A . n A 1 169 VAL 169 168 168 VAL VAL A . n A 1 170 THR 170 169 169 THR THR A . n A 1 171 SER 171 170 170 SER SER A . n A 1 172 ASP 172 171 171 ASP ASP A . n A 1 173 ILE 173 172 172 ILE ILE A . n A 1 174 VAL 174 173 173 VAL VAL A . n A 1 175 MSE 175 174 174 MSE MSE A . n A 1 176 ASP 176 175 175 ASP ASP A . n A 1 177 SER 177 176 176 SER SER A . n A 1 178 ALA 178 177 177 ALA ALA A . n A 1 179 GLN 179 178 178 GLN GLN A . n A 1 180 GLN 180 179 179 GLN GLN A . n A 1 181 PHE 181 180 180 PHE PHE A . n A 1 182 GLN 182 181 181 GLN GLN A . n A 1 183 ALA 183 182 182 ALA ALA A . n A 1 184 LEU 184 183 183 LEU LEU A . n A 1 185 PRO 185 184 184 PRO PRO A . n A 1 186 SER 186 185 185 SER SER A . n A 1 187 LEU 187 186 186 LEU LEU A . n A 1 188 ASP 188 187 187 ASP ASP A . n A 1 189 GLU 189 188 188 GLU GLU A . n A 1 190 VAL 190 189 189 VAL VAL A . n A 1 191 ILE 191 190 190 ILE ILE A . n A 1 192 ALA 192 191 191 ALA ALA A . n A 1 193 GLN 193 192 192 GLN GLN A . n A 1 194 TYR 194 193 193 TYR TYR A . n A 1 195 ASP 195 194 194 ASP ASP A . n A 1 196 SER 196 195 195 SER SER A . n A 1 197 ILE 197 196 196 ILE ILE A . n A 1 198 ASN 198 197 197 ASN ASN A . n A 1 199 ASN 199 198 198 ASN ASN A . n A 1 200 PRO 200 199 199 PRO PRO A . n A 1 201 GLY 201 200 200 GLY GLY A . n A 1 202 ARG 202 201 201 ARG ARG A . n A 1 203 GLN 203 202 202 GLN GLN A . n A 1 204 ARG 204 203 203 ARG ARG A . n A 1 205 LEU 205 204 204 LEU LEU A . n A 1 206 PHE 206 205 205 PHE PHE A . n A 1 207 ARG 207 206 206 ARG ARG A . n A 1 208 ASP 208 207 207 ASP ASP A . n A 1 209 LEU 209 208 208 LEU LEU A . n A 1 210 ALA 210 209 209 ALA ALA A . n A 1 211 ARG 211 210 210 ARG ARG A . n A 1 212 ARG 212 211 211 ARG ARG A . n A 1 213 GLN 213 212 212 GLN GLN A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 GLU 215 214 214 GLU GLU A . n A 1 216 ILE 216 215 215 ILE ILE A . n A 1 217 SER 217 216 216 SER SER A . n A 1 218 ARG 218 217 217 ARG ARG A . n A 1 219 ALA 219 218 218 ALA ALA A . n A 1 220 GLN 220 219 219 GLN GLN A . n A 1 221 ASP 221 220 220 ASP ASP A . n A 1 222 ILE 222 221 221 ILE ILE A . n A 1 223 GLU 223 222 222 GLU GLU A . n A 1 224 LEU 224 223 223 LEU LEU A . n A 1 225 TRP 225 224 224 TRP TRP A . n A 1 226 ALA 226 225 225 ALA ALA A . n A 1 227 ILE 227 226 226 ILE ILE A . n A 1 228 GLN 228 227 227 GLN GLN A . n A 1 229 LYS 229 228 228 LYS LYS A . n A 1 230 GLU 230 229 229 GLU GLU A . n A 1 231 ASP 231 230 ? ? ? A . n A 1 232 ARG 232 231 ? ? ? A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 GLN 3 2 2 GLN GLN B . n B 1 4 ALA 4 3 3 ALA ALA B . n B 1 5 PRO 5 4 4 PRO PRO B . n B 1 6 ARG 6 5 5 ARG ARG B . n B 1 7 LEU 7 6 6 LEU LEU B . n B 1 8 ARG 8 7 7 ARG ARG B . n B 1 9 VAL 9 8 8 VAL VAL B . n B 1 10 GLY 10 9 9 GLY GLY B . n B 1 11 ILE 11 10 10 ILE ILE B . n B 1 12 PHE 12 11 11 PHE PHE B . n B 1 13 ASP 13 12 12 ASP ASP B . n B 1 14 ASP 14 13 13 ASP ASP B . n B 1 15 GLY 15 14 14 GLY GLY B . n B 1 16 SER 16 15 15 SER SER B . n B 1 17 SER 17 16 16 SER SER B . n B 1 18 THR 18 17 17 THR THR B . n B 1 19 VAL 19 18 18 VAL VAL B . n B 1 20 ASN 20 19 19 ASN ASN B . n B 1 21 MSE 21 20 20 MSE MSE B . n B 1 22 ALA 22 21 21 ALA ALA B . n B 1 23 GLU 23 22 22 GLU GLU B . n B 1 24 LYS 24 23 23 LYS LYS B . n B 1 25 LEU 25 24 24 LEU LEU B . n B 1 26 ASP 26 25 25 ASP ASP B . n B 1 27 SER 27 26 26 SER SER B . n B 1 28 VAL 28 27 27 VAL VAL B . n B 1 29 GLY 29 28 28 GLY GLY B . n B 1 30 HIS 30 29 29 HIS HIS B . n B 1 31 TYR 31 30 30 TYR TYR B . n B 1 32 VAL 32 31 31 VAL VAL B . n B 1 33 THR 33 32 32 THR THR B . n B 1 34 VAL 34 33 33 VAL VAL B . n B 1 35 LEU 35 34 34 LEU LEU B . n B 1 36 HIS 36 35 35 HIS HIS B . n B 1 37 ALA 37 36 36 ALA ALA B . n B 1 38 PRO 38 37 37 PRO PRO B . n B 1 39 GLU 39 38 38 GLU GLU B . n B 1 40 ASP 40 39 39 ASP ASP B . n B 1 41 ILE 41 40 40 ILE ILE B . n B 1 42 ARG 42 41 41 ARG ARG B . n B 1 43 ASP 43 42 42 ASP ASP B . n B 1 44 PHE 44 43 43 PHE PHE B . n B 1 45 GLU 45 44 44 GLU GLU B . n B 1 46 LEU 46 45 45 LEU LEU B . n B 1 47 VAL 47 46 46 VAL VAL B . n B 1 48 VAL 48 47 47 VAL VAL B . n B 1 49 ILE 49 48 48 ILE ILE B . n B 1 50 ASP 50 49 49 ASP ASP B . n B 1 51 ALA 51 50 50 ALA ALA B . n B 1 52 HIS 52 51 51 HIS HIS B . n B 1 53 GLY 53 52 52 GLY GLY B . n B 1 54 VAL 54 53 53 VAL VAL B . n B 1 55 GLU 55 54 54 GLU GLU B . n B 1 56 GLY 56 55 55 GLY GLY B . n B 1 57 TYR 57 56 56 TYR TYR B . n B 1 58 VAL 58 57 57 VAL VAL B . n B 1 59 GLU 59 58 58 GLU GLU B . n B 1 60 LYS 60 59 59 LYS LYS B . n B 1 61 LEU 61 60 60 LEU LEU B . n B 1 62 SER 62 61 61 SER SER B . n B 1 63 ALA 63 62 62 ALA ALA B . n B 1 64 PHE 64 63 63 PHE PHE B . n B 1 65 ALA 65 64 64 ALA ALA B . n B 1 66 ARG 66 65 65 ARG ARG B . n B 1 67 ARG 67 66 66 ARG ARG B . n B 1 68 GLY 68 67 67 GLY GLY B . n B 1 69 GLN 69 68 68 GLN GLN B . n B 1 70 MSE 70 69 69 MSE MSE B . n B 1 71 PHE 71 70 70 PHE PHE B . n B 1 72 LEU 72 71 71 LEU LEU B . n B 1 73 HIS 73 72 72 HIS HIS B . n B 1 74 THR 74 73 73 THR THR B . n B 1 75 SER 75 74 74 SER SER B . n B 1 76 LEU 76 75 75 LEU LEU B . n B 1 77 THR 77 76 76 THR THR B . n B 1 78 HIS 78 77 77 HIS HIS B . n B 1 79 GLY 79 78 78 GLY GLY B . n B 1 80 ILE 80 79 79 ILE ILE B . n B 1 81 THR 81 80 80 THR THR B . n B 1 82 VAL 82 81 81 VAL VAL B . n B 1 83 MSE 83 82 82 MSE MSE B . n B 1 84 ASP 84 83 83 ASP ASP B . n B 1 85 PRO 85 84 84 PRO PRO B . n B 1 86 LEU 86 85 85 LEU LEU B . n B 1 87 GLU 87 86 86 GLU GLU B . n B 1 88 THR 88 87 87 THR THR B . n B 1 89 SER 89 88 88 SER SER B . n B 1 90 GLY 90 89 89 GLY GLY B . n B 1 91 GLY 91 90 90 GLY GLY B . n B 1 92 ILE 92 91 91 ILE ILE B . n B 1 93 VAL 93 92 92 VAL VAL B . n B 1 94 MSE 94 93 93 MSE MSE B . n B 1 95 SER 95 94 94 SER SER B . n B 1 96 ALA 96 95 95 ALA ALA B . n B 1 97 HIS 97 96 96 HIS HIS B . n B 1 98 PRO 98 97 97 PRO PRO B . n B 1 99 ILE 99 98 98 ILE ILE B . n B 1 100 GLY 100 99 99 GLY GLY B . n B 1 101 GLN 101 100 100 GLN GLN B . n B 1 102 ASP 102 101 101 ASP ASP B . n B 1 103 ARG 103 102 102 ARG ARG B . n B 1 104 TRP 104 103 103 TRP TRP B . n B 1 105 VAL 105 104 104 VAL VAL B . n B 1 106 ALA 106 105 105 ALA ALA B . n B 1 107 SER 107 106 106 SER SER B . n B 1 108 ALA 108 107 107 ALA ALA B . n B 1 109 LEU 109 108 108 LEU LEU B . n B 1 110 ASP 110 109 109 ASP ASP B . n B 1 111 GLU 111 110 110 GLU GLU B . n B 1 112 LEU 112 111 111 LEU LEU B . n B 1 113 GLY 113 112 112 GLY GLY B . n B 1 114 GLU 114 113 113 GLU GLU B . n B 1 115 THR 115 114 114 THR THR B . n B 1 116 ILE 116 115 115 ILE ILE B . n B 1 117 VAL 117 116 116 VAL VAL B . n B 1 118 GLY 118 117 117 GLY GLY B . n B 1 119 LEU 119 118 118 LEU LEU B . n B 1 120 LEU 120 119 119 LEU LEU B . n B 1 121 VAL 121 120 120 VAL VAL B . n B 1 122 GLY 122 121 121 GLY GLY B . n B 1 123 GLU 123 122 122 GLU GLU B . n B 1 124 LEU 124 123 123 LEU LEU B . n B 1 125 GLY 125 124 124 GLY GLY B . n B 1 126 GLY 126 125 125 GLY GLY B . n B 1 127 SER 127 126 126 SER SER B . n B 1 128 ILE 128 127 127 ILE ILE B . n B 1 129 VAL 129 128 128 VAL VAL B . n B 1 130 GLU 130 129 129 GLU GLU B . n B 1 131 ILE 131 130 130 ILE ILE B . n B 1 132 ALA 132 131 131 ALA ALA B . n B 1 133 ASP 133 132 132 ASP ASP B . n B 1 134 ASP 134 133 133 ASP ASP B . n B 1 135 LYS 135 134 134 LYS LYS B . n B 1 136 ARG 136 135 135 ARG ARG B . n B 1 137 ALA 137 136 136 ALA ALA B . n B 1 138 GLN 138 137 137 GLN GLN B . n B 1 139 LEU 139 138 138 LEU LEU B . n B 1 140 ALA 140 139 139 ALA ALA B . n B 1 141 ALA 141 140 140 ALA ALA B . n B 1 142 ALA 142 141 141 ALA ALA B . n B 1 143 LEU 143 142 142 LEU LEU B . n B 1 144 THR 144 143 143 THR THR B . n B 1 145 TYR 145 144 144 TYR TYR B . n B 1 146 ALA 146 145 145 ALA ALA B . n B 1 147 GLY 147 146 146 GLY GLY B . n B 1 148 PHE 148 147 147 PHE PHE B . n B 1 149 LEU 149 148 148 LEU LEU B . n B 1 150 SER 150 149 149 SER SER B . n B 1 151 THR 151 150 150 THR THR B . n B 1 152 LEU 152 151 151 LEU LEU B . n B 1 153 GLN 153 152 152 GLN GLN B . n B 1 154 ARG 154 153 153 ARG ARG B . n B 1 155 ASP 155 154 154 ASP ASP B . n B 1 156 ALA 156 155 155 ALA ALA B . n B 1 157 SER 157 156 156 SER SER B . n B 1 158 TYR 158 157 157 TYR TYR B . n B 1 159 PHE 159 158 158 PHE PHE B . n B 1 160 LEU 160 159 159 LEU LEU B . n B 1 161 ASP 161 160 160 ASP ASP B . n B 1 162 GLU 162 161 161 GLU GLU B . n B 1 163 PHE 163 162 162 PHE PHE B . n B 1 164 LEU 164 163 163 LEU LEU B . n B 1 165 GLY 165 164 164 GLY GLY B . n B 1 166 ASP 166 165 165 ASP ASP B . n B 1 167 PRO 167 166 166 PRO PRO B . n B 1 168 ASP 168 167 167 ASP ASP B . n B 1 169 VAL 169 168 168 VAL VAL B . n B 1 170 THR 170 169 169 THR THR B . n B 1 171 SER 171 170 170 SER SER B . n B 1 172 ASP 172 171 171 ASP ASP B . n B 1 173 ILE 173 172 172 ILE ILE B . n B 1 174 VAL 174 173 173 VAL VAL B . n B 1 175 MSE 175 174 174 MSE MSE B . n B 1 176 ASP 176 175 175 ASP ASP B . n B 1 177 SER 177 176 176 SER SER B . n B 1 178 ALA 178 177 177 ALA ALA B . n B 1 179 GLN 179 178 178 GLN GLN B . n B 1 180 GLN 180 179 179 GLN GLN B . n B 1 181 PHE 181 180 180 PHE PHE B . n B 1 182 GLN 182 181 181 GLN GLN B . n B 1 183 ALA 183 182 182 ALA ALA B . n B 1 184 LEU 184 183 183 LEU LEU B . n B 1 185 PRO 185 184 184 PRO PRO B . n B 1 186 SER 186 185 185 SER SER B . n B 1 187 LEU 187 186 186 LEU LEU B . n B 1 188 ASP 188 187 187 ASP ASP B . n B 1 189 GLU 189 188 188 GLU GLU B . n B 1 190 VAL 190 189 189 VAL VAL B . n B 1 191 ILE 191 190 190 ILE ILE B . n B 1 192 ALA 192 191 191 ALA ALA B . n B 1 193 GLN 193 192 192 GLN GLN B . n B 1 194 TYR 194 193 193 TYR TYR B . n B 1 195 ASP 195 194 194 ASP ASP B . n B 1 196 SER 196 195 195 SER SER B . n B 1 197 ILE 197 196 196 ILE ILE B . n B 1 198 ASN 198 197 197 ASN ASN B . n B 1 199 ASN 199 198 198 ASN ASN B . n B 1 200 PRO 200 199 199 PRO PRO B . n B 1 201 GLY 201 200 200 GLY GLY B . n B 1 202 ARG 202 201 201 ARG ARG B . n B 1 203 GLN 203 202 202 GLN GLN B . n B 1 204 ARG 204 203 203 ARG ARG B . n B 1 205 LEU 205 204 204 LEU LEU B . n B 1 206 PHE 206 205 205 PHE PHE B . n B 1 207 ARG 207 206 206 ARG ARG B . n B 1 208 ASP 208 207 207 ASP ASP B . n B 1 209 LEU 209 208 208 LEU LEU B . n B 1 210 ALA 210 209 209 ALA ALA B . n B 1 211 ARG 211 210 210 ARG ARG B . n B 1 212 ARG 212 211 211 ARG ARG B . n B 1 213 GLN 213 212 212 GLN GLN B . n B 1 214 ALA 214 213 213 ALA ALA B . n B 1 215 GLU 215 214 214 GLU GLU B . n B 1 216 ILE 216 215 215 ILE ILE B . n B 1 217 SER 217 216 216 SER SER B . n B 1 218 ARG 218 217 217 ARG ARG B . n B 1 219 ALA 219 218 218 ALA ALA B . n B 1 220 GLN 220 219 219 GLN GLN B . n B 1 221 ASP 221 220 220 ASP ASP B . n B 1 222 ILE 222 221 221 ILE ILE B . n B 1 223 GLU 223 222 222 GLU GLU B . n B 1 224 LEU 224 223 223 LEU LEU B . n B 1 225 TRP 225 224 224 TRP TRP B . n B 1 226 ALA 226 225 225 ALA ALA B . n B 1 227 ILE 227 226 226 ILE ILE B . n B 1 228 GLN 228 227 227 GLN GLN B . n B 1 229 LYS 229 228 228 LYS LYS B . n B 1 230 GLU 230 229 ? ? ? B . n B 1 231 ASP 231 230 ? ? ? B . n B 1 232 ARG 232 231 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 232 1 GOL GOL A . D 3 HOH 1 233 2 HOH HOH A . D 3 HOH 2 234 3 HOH HOH A . D 3 HOH 3 235 7 HOH HOH A . D 3 HOH 4 236 8 HOH HOH A . D 3 HOH 5 237 9 HOH HOH A . D 3 HOH 6 238 10 HOH HOH A . D 3 HOH 7 239 12 HOH HOH A . D 3 HOH 8 240 14 HOH HOH A . D 3 HOH 9 241 16 HOH HOH A . D 3 HOH 10 242 17 HOH HOH A . D 3 HOH 11 243 19 HOH HOH A . D 3 HOH 12 244 20 HOH HOH A . D 3 HOH 13 245 21 HOH HOH A . D 3 HOH 14 246 22 HOH HOH A . D 3 HOH 15 247 23 HOH HOH A . D 3 HOH 16 248 26 HOH HOH A . D 3 HOH 17 249 28 HOH HOH A . D 3 HOH 18 250 29 HOH HOH A . D 3 HOH 19 251 30 HOH HOH A . D 3 HOH 20 252 35 HOH HOH A . D 3 HOH 21 253 36 HOH HOH A . D 3 HOH 22 254 37 HOH HOH A . D 3 HOH 23 255 40 HOH HOH A . D 3 HOH 24 256 44 HOH HOH A . D 3 HOH 25 257 45 HOH HOH A . D 3 HOH 26 258 47 HOH HOH A . D 3 HOH 27 259 48 HOH HOH A . D 3 HOH 28 260 49 HOH HOH A . D 3 HOH 29 261 52 HOH HOH A . D 3 HOH 30 262 53 HOH HOH A . D 3 HOH 31 263 55 HOH HOH A . D 3 HOH 32 264 56 HOH HOH A . D 3 HOH 33 265 57 HOH HOH A . D 3 HOH 34 266 58 HOH HOH A . D 3 HOH 35 267 59 HOH HOH A . D 3 HOH 36 268 60 HOH HOH A . D 3 HOH 37 269 61 HOH HOH A . D 3 HOH 38 270 62 HOH HOH A . D 3 HOH 39 271 64 HOH HOH A . D 3 HOH 40 272 65 HOH HOH A . D 3 HOH 41 273 66 HOH HOH A . D 3 HOH 42 274 67 HOH HOH A . D 3 HOH 43 275 68 HOH HOH A . D 3 HOH 44 276 69 HOH HOH A . D 3 HOH 45 277 70 HOH HOH A . D 3 HOH 46 278 72 HOH HOH A . D 3 HOH 47 279 74 HOH HOH A . D 3 HOH 48 280 76 HOH HOH A . D 3 HOH 49 281 78 HOH HOH A . D 3 HOH 50 282 79 HOH HOH A . D 3 HOH 51 283 81 HOH HOH A . D 3 HOH 52 284 83 HOH HOH A . D 3 HOH 53 285 84 HOH HOH A . D 3 HOH 54 286 87 HOH HOH A . D 3 HOH 55 287 88 HOH HOH A . D 3 HOH 56 288 91 HOH HOH A . D 3 HOH 57 289 92 HOH HOH A . D 3 HOH 58 290 93 HOH HOH A . D 3 HOH 59 291 94 HOH HOH A . D 3 HOH 60 292 97 HOH HOH A . D 3 HOH 61 293 99 HOH HOH A . D 3 HOH 62 294 102 HOH HOH A . D 3 HOH 63 295 103 HOH HOH A . D 3 HOH 64 296 104 HOH HOH A . D 3 HOH 65 297 105 HOH HOH A . D 3 HOH 66 298 106 HOH HOH A . D 3 HOH 67 299 108 HOH HOH A . D 3 HOH 68 300 110 HOH HOH A . D 3 HOH 69 301 114 HOH HOH A . D 3 HOH 70 302 116 HOH HOH A . D 3 HOH 71 303 117 HOH HOH A . D 3 HOH 72 304 118 HOH HOH A . D 3 HOH 73 305 119 HOH HOH A . D 3 HOH 74 306 122 HOH HOH A . D 3 HOH 75 307 125 HOH HOH A . D 3 HOH 76 308 126 HOH HOH A . D 3 HOH 77 309 129 HOH HOH A . D 3 HOH 78 310 130 HOH HOH A . D 3 HOH 79 311 131 HOH HOH A . D 3 HOH 80 312 132 HOH HOH A . D 3 HOH 81 313 133 HOH HOH A . D 3 HOH 82 314 135 HOH HOH A . D 3 HOH 83 315 136 HOH HOH A . D 3 HOH 84 316 139 HOH HOH A . D 3 HOH 85 317 140 HOH HOH A . D 3 HOH 86 318 142 HOH HOH A . D 3 HOH 87 319 143 HOH HOH A . D 3 HOH 88 320 144 HOH HOH A . D 3 HOH 89 321 147 HOH HOH A . D 3 HOH 90 322 148 HOH HOH A . D 3 HOH 91 323 149 HOH HOH A . D 3 HOH 92 324 151 HOH HOH A . D 3 HOH 93 325 152 HOH HOH A . D 3 HOH 94 326 153 HOH HOH A . D 3 HOH 95 327 155 HOH HOH A . D 3 HOH 96 328 156 HOH HOH A . D 3 HOH 97 329 158 HOH HOH A . D 3 HOH 98 330 159 HOH HOH A . D 3 HOH 99 331 161 HOH HOH A . D 3 HOH 100 332 162 HOH HOH A . D 3 HOH 101 333 164 HOH HOH A . D 3 HOH 102 334 167 HOH HOH A . D 3 HOH 103 335 169 HOH HOH A . D 3 HOH 104 336 172 HOH HOH A . D 3 HOH 105 337 173 HOH HOH A . D 3 HOH 106 338 174 HOH HOH A . D 3 HOH 107 339 178 HOH HOH A . D 3 HOH 108 340 179 HOH HOH A . D 3 HOH 109 341 181 HOH HOH A . D 3 HOH 110 342 182 HOH HOH A . D 3 HOH 111 343 183 HOH HOH A . D 3 HOH 112 344 184 HOH HOH A . D 3 HOH 113 345 185 HOH HOH A . D 3 HOH 114 346 187 HOH HOH A . D 3 HOH 115 347 188 HOH HOH A . D 3 HOH 116 348 193 HOH HOH A . D 3 HOH 117 349 194 HOH HOH A . D 3 HOH 118 350 196 HOH HOH A . D 3 HOH 119 351 199 HOH HOH A . D 3 HOH 120 352 200 HOH HOH A . D 3 HOH 121 353 201 HOH HOH A . D 3 HOH 122 354 202 HOH HOH A . D 3 HOH 123 355 203 HOH HOH A . D 3 HOH 124 356 204 HOH HOH A . D 3 HOH 125 357 205 HOH HOH A . D 3 HOH 126 358 207 HOH HOH A . D 3 HOH 127 359 210 HOH HOH A . D 3 HOH 128 360 211 HOH HOH A . D 3 HOH 129 361 212 HOH HOH A . D 3 HOH 130 362 213 HOH HOH A . D 3 HOH 131 363 214 HOH HOH A . D 3 HOH 132 364 217 HOH HOH A . D 3 HOH 133 365 218 HOH HOH A . D 3 HOH 134 366 219 HOH HOH A . D 3 HOH 135 367 220 HOH HOH A . D 3 HOH 136 368 221 HOH HOH A . D 3 HOH 137 369 222 HOH HOH A . D 3 HOH 138 370 223 HOH HOH A . D 3 HOH 139 371 224 HOH HOH A . D 3 HOH 140 372 225 HOH HOH A . D 3 HOH 141 373 226 HOH HOH A . D 3 HOH 142 374 229 HOH HOH A . D 3 HOH 143 375 249 HOH HOH A . D 3 HOH 144 376 250 HOH HOH A . E 3 HOH 1 232 4 HOH HOH B . E 3 HOH 2 233 5 HOH HOH B . E 3 HOH 3 234 6 HOH HOH B . E 3 HOH 4 235 11 HOH HOH B . E 3 HOH 5 236 13 HOH HOH B . E 3 HOH 6 237 15 HOH HOH B . E 3 HOH 7 238 18 HOH HOH B . E 3 HOH 8 239 24 HOH HOH B . E 3 HOH 9 240 25 HOH HOH B . E 3 HOH 10 241 27 HOH HOH B . E 3 HOH 11 242 31 HOH HOH B . E 3 HOH 12 243 32 HOH HOH B . E 3 HOH 13 244 33 HOH HOH B . E 3 HOH 14 245 34 HOH HOH B . E 3 HOH 15 246 38 HOH HOH B . E 3 HOH 16 247 39 HOH HOH B . E 3 HOH 17 248 41 HOH HOH B . E 3 HOH 18 249 42 HOH HOH B . E 3 HOH 19 250 43 HOH HOH B . E 3 HOH 20 251 46 HOH HOH B . E 3 HOH 21 252 50 HOH HOH B . E 3 HOH 22 253 51 HOH HOH B . E 3 HOH 23 254 54 HOH HOH B . E 3 HOH 24 255 63 HOH HOH B . E 3 HOH 25 256 71 HOH HOH B . E 3 HOH 26 257 73 HOH HOH B . E 3 HOH 27 258 75 HOH HOH B . E 3 HOH 28 259 77 HOH HOH B . E 3 HOH 29 260 80 HOH HOH B . E 3 HOH 30 261 82 HOH HOH B . E 3 HOH 31 262 85 HOH HOH B . E 3 HOH 32 263 86 HOH HOH B . E 3 HOH 33 264 89 HOH HOH B . E 3 HOH 34 265 90 HOH HOH B . E 3 HOH 35 266 95 HOH HOH B . E 3 HOH 36 267 96 HOH HOH B . E 3 HOH 37 268 98 HOH HOH B . E 3 HOH 38 269 100 HOH HOH B . E 3 HOH 39 270 101 HOH HOH B . E 3 HOH 40 271 107 HOH HOH B . E 3 HOH 41 272 109 HOH HOH B . E 3 HOH 42 273 111 HOH HOH B . E 3 HOH 43 274 112 HOH HOH B . E 3 HOH 44 275 113 HOH HOH B . E 3 HOH 45 276 115 HOH HOH B . E 3 HOH 46 277 120 HOH HOH B . E 3 HOH 47 278 121 HOH HOH B . E 3 HOH 48 279 123 HOH HOH B . E 3 HOH 49 280 124 HOH HOH B . E 3 HOH 50 281 127 HOH HOH B . E 3 HOH 51 282 128 HOH HOH B . E 3 HOH 52 283 134 HOH HOH B . E 3 HOH 53 284 137 HOH HOH B . E 3 HOH 54 285 138 HOH HOH B . E 3 HOH 55 286 141 HOH HOH B . E 3 HOH 56 287 145 HOH HOH B . E 3 HOH 57 288 146 HOH HOH B . E 3 HOH 58 289 150 HOH HOH B . E 3 HOH 59 290 154 HOH HOH B . E 3 HOH 60 291 157 HOH HOH B . E 3 HOH 61 292 160 HOH HOH B . E 3 HOH 62 293 163 HOH HOH B . E 3 HOH 63 294 165 HOH HOH B . E 3 HOH 64 295 166 HOH HOH B . E 3 HOH 65 296 168 HOH HOH B . E 3 HOH 66 297 170 HOH HOH B . E 3 HOH 67 298 171 HOH HOH B . E 3 HOH 68 299 175 HOH HOH B . E 3 HOH 69 300 176 HOH HOH B . E 3 HOH 70 301 177 HOH HOH B . E 3 HOH 71 302 180 HOH HOH B . E 3 HOH 72 303 186 HOH HOH B . E 3 HOH 73 304 189 HOH HOH B . E 3 HOH 74 305 190 HOH HOH B . E 3 HOH 75 306 191 HOH HOH B . E 3 HOH 76 307 192 HOH HOH B . E 3 HOH 77 308 195 HOH HOH B . E 3 HOH 78 309 197 HOH HOH B . E 3 HOH 79 310 198 HOH HOH B . E 3 HOH 80 311 206 HOH HOH B . E 3 HOH 81 312 208 HOH HOH B . E 3 HOH 82 313 209 HOH HOH B . E 3 HOH 83 314 215 HOH HOH B . E 3 HOH 84 315 216 HOH HOH B . E 3 HOH 85 316 227 HOH HOH B . E 3 HOH 86 317 228 HOH HOH B . E 3 HOH 87 318 230 HOH HOH B . E 3 HOH 88 319 231 HOH HOH B . E 3 HOH 89 320 232 HOH HOH B . E 3 HOH 90 321 233 HOH HOH B . E 3 HOH 91 322 234 HOH HOH B . E 3 HOH 92 323 235 HOH HOH B . E 3 HOH 93 324 236 HOH HOH B . E 3 HOH 94 325 237 HOH HOH B . E 3 HOH 95 326 238 HOH HOH B . E 3 HOH 96 327 239 HOH HOH B . E 3 HOH 97 328 240 HOH HOH B . E 3 HOH 98 329 241 HOH HOH B . E 3 HOH 99 330 242 HOH HOH B . E 3 HOH 100 331 243 HOH HOH B . E 3 HOH 101 332 244 HOH HOH B . E 3 HOH 102 333 245 HOH HOH B . E 3 HOH 103 334 246 HOH HOH B . E 3 HOH 104 335 247 HOH HOH B . E 3 HOH 105 336 248 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 21 A MSE 20 ? MET SELENOMETHIONINE 2 A MSE 70 A MSE 69 ? MET SELENOMETHIONINE 3 A MSE 83 A MSE 82 ? MET SELENOMETHIONINE 4 A MSE 94 A MSE 93 ? MET SELENOMETHIONINE 5 A MSE 175 A MSE 174 ? MET SELENOMETHIONINE 6 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 7 B MSE 21 B MSE 20 ? MET SELENOMETHIONINE 8 B MSE 70 B MSE 69 ? MET SELENOMETHIONINE 9 B MSE 83 B MSE 82 ? MET SELENOMETHIONINE 10 B MSE 94 B MSE 93 ? MET SELENOMETHIONINE 11 B MSE 175 B MSE 174 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6030 ? 1 MORE -40 ? 1 'SSA (A^2)' 20350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-01 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 130.3820 10.7000 38.0690 -0.0800 -0.1154 -0.1098 0.0145 -0.0429 -0.0153 2.2522 0.4799 0.9268 0.7651 -1.2225 -0.4444 0.0322 -0.0221 -0.0101 -0.0158 -0.1157 -0.0490 0.0221 0.0303 0.0508 'X-RAY DIFFRACTION' 2 ? refined 103.4240 10.2300 55.7260 -0.0183 -0.0966 -0.0764 0.0104 0.0039 0.0488 4.4106 1.5523 1.3433 -1.9413 -1.5349 0.9427 -0.2810 0.0677 0.2133 -0.2021 -0.3841 0.2916 0.1841 0.0457 0.0101 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 3 A 230 ? A 2 A 229 'X-RAY DIFFRACTION' ? 2 2 B 2 B 229 ? B 1 B 228 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 3.004 'September 10, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 SHELXD . ? ? ? ? phasing ? ? ? 8 autoSHARP . ? ? ? ? phasing ? ? ? 9 # _pdbx_entry_details.entry_id 3DFU _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 93 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 93 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.389 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.561 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 LEU _pdbx_validate_rmsd_angle.auth_seq_id_1 183 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 LEU _pdbx_validate_rmsd_angle.auth_seq_id_2 183 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 LEU _pdbx_validate_rmsd_angle.auth_seq_id_3 183 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 133.39 _pdbx_validate_rmsd_angle.angle_target_value 115.30 _pdbx_validate_rmsd_angle.angle_deviation 18.09 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 165 ? ? -160.61 85.94 2 1 PRO A 184 ? ? -66.87 -179.68 3 1 ASP B 165 ? ? -156.20 84.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 7 ? CZ ? A ARG 8 CZ 2 1 Y 1 A ARG 7 ? NH1 ? A ARG 8 NH1 3 1 Y 1 A ARG 7 ? NH2 ? A ARG 8 NH2 4 1 Y 1 A ARG 41 ? CG ? A ARG 42 CG 5 1 Y 1 A ARG 41 ? CD ? A ARG 42 CD 6 1 Y 1 A ARG 41 ? NE ? A ARG 42 NE 7 1 Y 1 A ARG 41 ? CZ ? A ARG 42 CZ 8 1 Y 1 A ARG 41 ? NH1 ? A ARG 42 NH1 9 1 Y 1 A ARG 41 ? NH2 ? A ARG 42 NH2 10 1 Y 1 A ASP 42 ? CG ? A ASP 43 CG 11 1 Y 1 A ASP 42 ? OD1 ? A ASP 43 OD1 12 1 Y 1 A ASP 42 ? OD2 ? A ASP 43 OD2 13 1 Y 1 A GLU 58 ? CD ? A GLU 59 CD 14 1 Y 1 A GLU 58 ? OE1 ? A GLU 59 OE1 15 1 Y 1 A GLU 58 ? OE2 ? A GLU 59 OE2 16 1 Y 1 A LYS 59 ? CD ? A LYS 60 CD 17 1 Y 1 A LYS 59 ? CE ? A LYS 60 CE 18 1 Y 1 A LYS 59 ? NZ ? A LYS 60 NZ 19 1 Y 1 A GLU 129 ? CD ? A GLU 130 CD 20 1 Y 1 A GLU 129 ? OE1 ? A GLU 130 OE1 21 1 Y 1 A GLU 129 ? OE2 ? A GLU 130 OE2 22 1 Y 1 A GLN 181 ? CD ? A GLN 182 CD 23 1 Y 1 A GLN 181 ? OE1 ? A GLN 182 OE1 24 1 Y 1 A GLN 181 ? NE2 ? A GLN 182 NE2 25 1 Y 1 B GLN 2 ? CG ? B GLN 3 CG 26 1 Y 1 B GLN 2 ? CD ? B GLN 3 CD 27 1 Y 1 B GLN 2 ? OE1 ? B GLN 3 OE1 28 1 Y 1 B GLN 2 ? NE2 ? B GLN 3 NE2 29 1 Y 1 B ARG 7 ? CZ ? B ARG 8 CZ 30 1 Y 1 B ARG 7 ? NH1 ? B ARG 8 NH1 31 1 Y 1 B ARG 7 ? NH2 ? B ARG 8 NH2 32 1 Y 1 B GLU 38 ? CG ? B GLU 39 CG 33 1 Y 1 B GLU 38 ? CD ? B GLU 39 CD 34 1 Y 1 B GLU 38 ? OE1 ? B GLU 39 OE1 35 1 Y 1 B GLU 38 ? OE2 ? B GLU 39 OE2 36 1 Y 1 B ARG 41 ? CG ? B ARG 42 CG 37 1 Y 1 B ARG 41 ? CD ? B ARG 42 CD 38 1 Y 1 B ARG 41 ? NE ? B ARG 42 NE 39 1 Y 1 B ARG 41 ? CZ ? B ARG 42 CZ 40 1 Y 1 B ARG 41 ? NH1 ? B ARG 42 NH1 41 1 Y 1 B ARG 41 ? NH2 ? B ARG 42 NH2 42 1 Y 1 B ASP 42 ? CG ? B ASP 43 CG 43 1 Y 1 B ASP 42 ? OD1 ? B ASP 43 OD1 44 1 Y 1 B ASP 42 ? OD2 ? B ASP 43 OD2 45 1 Y 1 B GLU 58 ? CG ? B GLU 59 CG 46 1 Y 1 B GLU 58 ? CD ? B GLU 59 CD 47 1 Y 1 B GLU 58 ? OE1 ? B GLU 59 OE1 48 1 Y 1 B GLU 58 ? OE2 ? B GLU 59 OE2 49 1 Y 1 B LYS 59 ? CG ? B LYS 60 CG 50 1 Y 1 B LYS 59 ? CD ? B LYS 60 CD 51 1 Y 1 B LYS 59 ? CE ? B LYS 60 CE 52 1 Y 1 B LYS 59 ? NZ ? B LYS 60 NZ 53 1 Y 1 B ARG 65 ? CG ? B ARG 66 CG 54 1 Y 1 B ARG 65 ? CD ? B ARG 66 CD 55 1 Y 1 B ARG 65 ? NE ? B ARG 66 NE 56 1 Y 1 B ARG 65 ? CZ ? B ARG 66 CZ 57 1 Y 1 B ARG 65 ? NH1 ? B ARG 66 NH1 58 1 Y 1 B ARG 65 ? NH2 ? B ARG 66 NH2 59 1 Y 1 B ARG 66 ? CD ? B ARG 67 CD 60 1 Y 1 B ARG 66 ? NE ? B ARG 67 NE 61 1 Y 1 B ARG 66 ? CZ ? B ARG 67 CZ 62 1 Y 1 B ARG 66 ? NH1 ? B ARG 67 NH1 63 1 Y 1 B ARG 66 ? NH2 ? B ARG 67 NH2 64 1 Y 1 B GLU 129 ? CD ? B GLU 130 CD 65 1 Y 1 B GLU 129 ? OE1 ? B GLU 130 OE1 66 1 Y 1 B GLU 129 ? OE2 ? B GLU 130 OE2 67 1 Y 1 B ARG 153 ? CZ ? B ARG 154 CZ 68 1 Y 1 B ARG 153 ? NH1 ? B ARG 154 NH1 69 1 Y 1 B ARG 153 ? NH2 ? B ARG 154 NH2 70 1 Y 1 B ARG 217 ? NE ? B ARG 218 NE 71 1 Y 1 B ARG 217 ? CZ ? B ARG 218 CZ 72 1 Y 1 B ARG 217 ? NH1 ? B ARG 218 NH1 73 1 Y 1 B ARG 217 ? NH2 ? B ARG 218 NH2 74 1 Y 1 B GLN 227 ? CD ? B GLN 228 CD 75 1 Y 1 B GLN 227 ? OE1 ? B GLN 228 OE1 76 1 Y 1 B GLN 227 ? NE2 ? B GLN 228 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A ASP 230 ? A ASP 231 4 1 Y 1 A ARG 231 ? A ARG 232 5 1 Y 1 B GLY 0 ? B GLY 1 6 1 Y 1 B GLU 229 ? B GLU 230 7 1 Y 1 B ASP 230 ? B ASP 231 8 1 Y 1 B ARG 231 ? B ARG 232 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #