data_3DGY # _entry.id 3DGY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DGY pdb_00003dgy 10.2210/pdb3dgy/pdb RCSB RCSB048025 ? ? WWPDB D_1000048025 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1py3 'Structure of ribonuclease Sa2 without ligand' unspecified PDB 1pyl 'Structure of ribonuclease Sa2 without ligand' unspecified PDB 3d4a ;Structure of ribonuclease Sa2 with 3'-GMP ; unspecified PDB 3d5i ;Crystal structure of ribonuclease Sa2 with exo-2',3'-cyclophosphorotioate ; unspecified PDB 1gmp ;Structure of ribonuclease Sa with 2'-GMP ; unspecified PDB 2sar ;Structure of ribonuclease Sa with 3'-GMP ; unspecified PDB 3DH2 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DGY _pdbx_database_status.recvd_initial_deposition_date 2008-06-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sevcik, J.' 1 'Bauerova-Hlinkova, V.' 2 # _citation.id primary _citation.title 'Structure of RNase Sa2 complexes with mononucleotides - new aspects of catalytic reaction and substrate recognition' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 276 _citation.page_first 4156 _citation.page_last 4168 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19558492 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2009.07125.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bauerova-Hlinkova, V.' 1 ? primary 'Dvorsky, R.' 2 ? primary 'Perecko, D.' 3 ? primary 'Povazanec, F.' 4 ? primary 'Sevcik, J.' 5 ? # _cell.entry_id 3DGY _cell.length_a 101.489 _cell.length_b 67.313 _cell.length_c 57.234 _cell.angle_alpha 90.00 _cell.angle_beta 100.63 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DGY _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Ribonuclease 10909.012 3 3.1.4.8 ? ? ? 2 non-polymer man beta-D-glucopyranose 180.156 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 non-polymer syn "GUANOSINE-2'-MONOPHOSPHATE" 363.221 1 ? ? ? ? 5 water nat water 18.015 277 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ribonuclease Sa2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVTPGSNDRGTRRVVTGGYGEQ YWSPDHYATFQEIDPRC ; _entity_poly.pdbx_seq_one_letter_code_can ;ADPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVTPGSNDRGTRRVVTGGYGEQ YWSPDHYATFQEIDPRC ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 PRO n 1 4 ALA n 1 5 LEU n 1 6 ALA n 1 7 ASP n 1 8 VAL n 1 9 CYS n 1 10 ARG n 1 11 THR n 1 12 LYS n 1 13 LEU n 1 14 PRO n 1 15 SER n 1 16 GLN n 1 17 ALA n 1 18 GLN n 1 19 ASP n 1 20 THR n 1 21 LEU n 1 22 ALA n 1 23 LEU n 1 24 ILE n 1 25 ALA n 1 26 LYS n 1 27 ASN n 1 28 GLY n 1 29 PRO n 1 30 TYR n 1 31 PRO n 1 32 TYR n 1 33 ASN n 1 34 ARG n 1 35 ASP n 1 36 GLY n 1 37 VAL n 1 38 VAL n 1 39 PHE n 1 40 GLU n 1 41 ASN n 1 42 ARG n 1 43 GLU n 1 44 SER n 1 45 ARG n 1 46 LEU n 1 47 PRO n 1 48 LYS n 1 49 LYS n 1 50 GLY n 1 51 ASN n 1 52 GLY n 1 53 TYR n 1 54 TYR n 1 55 HIS n 1 56 GLU n 1 57 PHE n 1 58 THR n 1 59 VAL n 1 60 VAL n 1 61 THR n 1 62 PRO n 1 63 GLY n 1 64 SER n 1 65 ASN n 1 66 ASP n 1 67 ARG n 1 68 GLY n 1 69 THR n 1 70 ARG n 1 71 ARG n 1 72 VAL n 1 73 VAL n 1 74 THR n 1 75 GLY n 1 76 GLY n 1 77 TYR n 1 78 GLY n 1 79 GLU n 1 80 GLN n 1 81 TYR n 1 82 TRP n 1 83 SER n 1 84 PRO n 1 85 ASP n 1 86 HIS n 1 87 TYR n 1 88 ALA n 1 89 THR n 1 90 PHE n 1 91 GLN n 1 92 GLU n 1 93 ILE n 1 94 ASP n 1 95 PRO n 1 96 ARG n 1 97 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain R8/26 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptomyces aureofaciens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1894 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Nova Blue' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pEH200 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q53752_STRAU _struct_ref.pdbx_db_accession Q53752 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ADPALADVCRTKLPSQAQDTLALIAKNGPYPYNRDGVVFENRESRLPKKGNGYYHEFTVVTPGSNDRGTRRVVTGGYGEQ YWSPDHYATFQEIDPRC ; _struct_ref.pdbx_align_begin 67 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 3DGY A 1 ? 97 ? Q53752 67 ? 163 ? 1 97 2 1 3DGY B 1 ? 97 ? Q53752 67 ? 163 ? 1 97 3 1 3DGY C 1 ? 97 ? Q53752 67 ? 163 ? 1 97 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2GP non-polymer . "GUANOSINE-2'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose 'beta-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 3DGY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.94 _exptl_crystal.density_percent_sol 58.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_details 'ammonium sulfate, phosphate buffer pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-06-15 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X31' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X31 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 3DGY _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 20 _reflns.number_all 35195 _reflns.number_obs 34762 _reflns.percent_possible_obs 98.9 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.3 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.82 _reflns_shell.percent_possible_all 96.8 _reflns_shell.Rmerge_I_obs 0.317 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.7 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1104 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DGY _refine.ls_number_reflns_obs 33012 _refine.ls_number_reflns_all 34762 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 98.78 _refine.ls_R_factor_obs 0.21707 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21548 _refine.ls_R_factor_R_free 0.24635 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1750 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.947 _refine.correlation_coeff_Fo_to_Fc_free 0.927 _refine.B_iso_mean 23.922 _refine.aniso_B[1][1] -1.11 _refine.aniso_B[2][2] 2.28 _refine.aniso_B[3][3] -1.11 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.16 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 1py3 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.133 _refine.pdbx_overall_ESU_R_Free 0.126 _refine.overall_SU_ML 0.091 _refine.overall_SU_B 5.295 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2217 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 51 _refine_hist.number_atoms_solvent 277 _refine_hist.number_atoms_total 2545 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 2336 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1619 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.388 1.979 ? 3181 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.931 3.003 ? 3875 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.661 5.000 ? 271 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 28.785 22.705 ? 122 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.922 15.000 ? 346 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.416 15.000 ? 25 'X-RAY DIFFRACTION' ? r_chiral_restr 0.080 0.200 ? 323 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2599 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 511 'X-RAY DIFFRACTION' ? r_nbd_refined 0.210 0.200 ? 464 'X-RAY DIFFRACTION' ? r_nbd_other 0.210 0.200 ? 1695 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.179 0.200 ? 1108 'X-RAY DIFFRACTION' ? r_nbtor_other 0.079 0.200 ? 1181 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.181 0.200 ? 180 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.162 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.204 0.200 ? 39 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.178 0.200 ? 21 'X-RAY DIFFRACTION' ? r_mcbond_it 0.809 1.500 ? 1733 'X-RAY DIFFRACTION' ? r_mcbond_other 0.176 1.500 ? 555 'X-RAY DIFFRACTION' ? r_mcangle_it 0.986 2.000 ? 2223 'X-RAY DIFFRACTION' ? r_scbond_it 1.667 3.000 ? 1157 'X-RAY DIFFRACTION' ? r_scangle_it 2.389 4.500 ? 958 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 2434 _refine_ls_shell.R_factor_R_work 0.242 _refine_ls_shell.percent_reflns_obs 97.92 _refine_ls_shell.R_factor_R_free 0.279 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 110 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DGY _struct.title ;Crystal structure of ribonuclease Sa2 with guanosine-2'-cyclophosphate ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DGY _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text ;ribonuclease, hydrolase, protein-mononucleotide complex, guanosine-2'-monophosphate, mononucleotide ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 3 ? I N N 5 ? J N N 5 ? K N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 11 ? LEU A 13 ? THR A 11 LEU A 13 5 ? 3 HELX_P HELX_P2 2 PRO A 14 ? ASN A 27 ? PRO A 14 ASN A 27 1 ? 14 HELX_P HELX_P3 3 THR B 11 ? LEU B 13 ? THR B 11 LEU B 13 5 ? 3 HELX_P HELX_P4 4 PRO B 14 ? ASN B 27 ? PRO B 14 ASN B 27 1 ? 14 HELX_P HELX_P5 5 THR C 11 ? LEU C 13 ? THR C 11 LEU C 13 5 ? 3 HELX_P HELX_P6 6 PRO C 14 ? LYS C 26 ? PRO C 14 LYS C 26 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 9 SG ? ? ? 1_555 A CYS 97 SG ? ? A CYS 9 A CYS 97 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? B CYS 9 SG ? ? ? 1_555 B CYS 97 SG ? ? B CYS 9 B CYS 97 1_555 ? ? ? ? ? ? ? 2.055 ? ? disulf3 disulf ? ? C CYS 9 SG ? ? ? 1_555 C CYS 97 SG ? ? C CYS 9 C CYS 97 1_555 ? ? ? ? ? ? ? 2.049 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 28 A . ? GLY 28 A PRO 29 A ? PRO 29 A 1 -2.69 2 GLY 28 B . ? GLY 28 B PRO 29 B ? PRO 29 B 1 -12.67 3 GLY 28 C . ? GLY 28 C PRO 29 C ? PRO 29 C 1 4.26 4 PRO 62 C . ? PRO 62 C GLY 63 C ? GLY 63 C 1 -17.66 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 6 ? CYS A 9 ? ALA A 6 CYS A 9 A 2 GLN A 91 ? ASP A 94 ? GLN A 91 ASP A 94 A 3 GLN A 80 ? SER A 83 ? GLN A 80 SER A 83 A 4 ARG A 71 ? THR A 74 ? ARG A 71 THR A 74 A 5 TYR A 54 ? THR A 58 ? TYR A 54 THR A 58 A 6 VAL A 37 ? PHE A 39 ? VAL A 37 PHE A 39 B 1 ALA B 6 ? CYS B 9 ? ALA B 6 CYS B 9 B 2 GLN B 91 ? ASP B 94 ? GLN B 91 ASP B 94 B 3 GLN B 80 ? SER B 83 ? GLN B 80 SER B 83 B 4 ARG B 71 ? THR B 74 ? ARG B 71 THR B 74 B 5 HIS B 55 ? THR B 58 ? HIS B 55 THR B 58 C 1 ALA C 6 ? CYS C 9 ? ALA C 6 CYS C 9 C 2 GLN C 91 ? ASP C 94 ? GLN C 91 ASP C 94 C 3 GLN C 80 ? SER C 83 ? GLN C 80 SER C 83 C 4 ARG C 71 ? THR C 74 ? ARG C 71 THR C 74 C 5 TYR C 54 ? THR C 58 ? TYR C 54 THR C 58 C 6 VAL C 37 ? PHE C 39 ? VAL C 37 PHE C 39 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 8 ? N VAL A 8 O ASP A 94 ? O ASP A 94 A 2 3 O GLN A 91 ? O GLN A 91 N TRP A 82 ? N TRP A 82 A 3 4 O TYR A 81 ? O TYR A 81 N VAL A 73 ? N VAL A 73 A 4 5 O VAL A 72 ? O VAL A 72 N PHE A 57 ? N PHE A 57 A 5 6 O GLU A 56 ? O GLU A 56 N VAL A 37 ? N VAL A 37 B 1 2 N VAL B 8 ? N VAL B 8 O ASP B 94 ? O ASP B 94 B 2 3 O GLN B 91 ? O GLN B 91 N TRP B 82 ? N TRP B 82 B 3 4 O SER B 83 ? O SER B 83 N ARG B 71 ? N ARG B 71 B 4 5 O THR B 74 ? O THR B 74 N HIS B 55 ? N HIS B 55 C 1 2 N VAL C 8 ? N VAL C 8 O ASP C 94 ? O ASP C 94 C 2 3 O GLN C 91 ? O GLN C 91 N TRP C 82 ? N TRP C 82 C 3 4 O SER C 83 ? O SER C 83 N ARG C 71 ? N ARG C 71 C 4 5 O VAL C 72 ? O VAL C 72 N PHE C 57 ? N PHE C 57 C 5 6 O GLU C 56 ? O GLU C 56 N VAL C 37 ? N VAL C 37 # _database_PDB_matrix.entry_id 3DGY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DGY _atom_sites.fract_transf_matrix[1][1] 0.009853 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001849 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014856 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017777 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 ASP 2 2 ? ? ? A . n A 1 3 PRO 3 3 ? ? ? A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 CYS 9 9 9 CYS CYS A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ASN 33 33 33 ASN ASN A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 PHE 39 39 39 PHE PHE A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 HIS 55 55 55 HIS HIS A . n A 1 56 GLU 56 56 56 GLU GLU A . n A 1 57 PHE 57 57 57 PHE PHE A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 PRO 62 62 62 PRO PRO A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 SER 64 64 ? ? ? A . n A 1 65 ASN 65 65 ? ? ? A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 HIS 86 86 86 HIS HIS A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 PRO 95 95 95 PRO PRO A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 CYS 97 97 97 CYS CYS A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 ASP 2 2 2 ASP ASP B . n B 1 3 PRO 3 3 3 PRO PRO B . n B 1 4 ALA 4 4 4 ALA ALA B . n B 1 5 LEU 5 5 5 LEU LEU B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 ASP 7 7 7 ASP ASP B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 CYS 9 9 9 CYS CYS B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 LYS 12 12 12 LYS LYS B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 PRO 14 14 14 PRO PRO B . n B 1 15 SER 15 15 15 SER SER B . n B 1 16 GLN 16 16 16 GLN GLN B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 GLN 18 18 18 GLN GLN B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 THR 20 20 20 THR THR B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 ILE 24 24 24 ILE ILE B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 GLY 28 28 28 GLY GLY B . n B 1 29 PRO 29 29 29 PRO PRO B . n B 1 30 TYR 30 30 30 TYR TYR B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 TYR 32 32 32 TYR TYR B . n B 1 33 ASN 33 33 33 ASN ASN B . n B 1 34 ARG 34 34 34 ARG ARG B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 VAL 37 37 37 VAL VAL B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 PHE 39 39 39 PHE PHE B . n B 1 40 GLU 40 40 40 GLU GLU B . n B 1 41 ASN 41 41 41 ASN ASN B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 SER 44 44 44 SER SER B . n B 1 45 ARG 45 45 45 ARG ARG B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 LYS 49 49 49 LYS LYS B . n B 1 50 GLY 50 50 50 GLY GLY B . n B 1 51 ASN 51 51 51 ASN ASN B . n B 1 52 GLY 52 52 52 GLY GLY B . n B 1 53 TYR 53 53 53 TYR TYR B . n B 1 54 TYR 54 54 54 TYR TYR B . n B 1 55 HIS 55 55 55 HIS HIS B . n B 1 56 GLU 56 56 56 GLU GLU B . n B 1 57 PHE 57 57 57 PHE PHE B . n B 1 58 THR 58 58 58 THR THR B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 PRO 62 62 62 PRO PRO B . n B 1 63 GLY 63 63 ? ? ? B . n B 1 64 SER 64 64 ? ? ? B . n B 1 65 ASN 65 65 ? ? ? B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 ARG 67 67 67 ARG ARG B . n B 1 68 GLY 68 68 68 GLY GLY B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 ARG 70 70 70 ARG ARG B . n B 1 71 ARG 71 71 71 ARG ARG B . n B 1 72 VAL 72 72 72 VAL VAL B . n B 1 73 VAL 73 73 73 VAL VAL B . n B 1 74 THR 74 74 74 THR THR B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 GLY 76 76 76 GLY GLY B . n B 1 77 TYR 77 77 77 TYR TYR B . n B 1 78 GLY 78 78 78 GLY GLY B . n B 1 79 GLU 79 79 79 GLU GLU B . n B 1 80 GLN 80 80 80 GLN GLN B . n B 1 81 TYR 81 81 81 TYR TYR B . n B 1 82 TRP 82 82 82 TRP TRP B . n B 1 83 SER 83 83 83 SER SER B . n B 1 84 PRO 84 84 84 PRO PRO B . n B 1 85 ASP 85 85 85 ASP ASP B . n B 1 86 HIS 86 86 86 HIS HIS B . n B 1 87 TYR 87 87 87 TYR TYR B . n B 1 88 ALA 88 88 88 ALA ALA B . n B 1 89 THR 89 89 89 THR THR B . n B 1 90 PHE 90 90 90 PHE PHE B . n B 1 91 GLN 91 91 91 GLN GLN B . n B 1 92 GLU 92 92 92 GLU GLU B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 ASP 94 94 94 ASP ASP B . n B 1 95 PRO 95 95 95 PRO PRO B . n B 1 96 ARG 96 96 96 ARG ARG B . n B 1 97 CYS 97 97 97 CYS CYS B . n C 1 1 ALA 1 1 ? ? ? C . n C 1 2 ASP 2 2 ? ? ? C . n C 1 3 PRO 3 3 ? ? ? C . n C 1 4 ALA 4 4 ? ? ? C . n C 1 5 LEU 5 5 5 LEU LEU C . n C 1 6 ALA 6 6 6 ALA ALA C . n C 1 7 ASP 7 7 7 ASP ASP C . n C 1 8 VAL 8 8 8 VAL VAL C . n C 1 9 CYS 9 9 9 CYS CYS C . n C 1 10 ARG 10 10 10 ARG ARG C . n C 1 11 THR 11 11 11 THR THR C . n C 1 12 LYS 12 12 12 LYS LYS C . n C 1 13 LEU 13 13 13 LEU LEU C . n C 1 14 PRO 14 14 14 PRO PRO C . n C 1 15 SER 15 15 15 SER SER C . n C 1 16 GLN 16 16 16 GLN GLN C . n C 1 17 ALA 17 17 17 ALA ALA C . n C 1 18 GLN 18 18 18 GLN GLN C . n C 1 19 ASP 19 19 19 ASP ASP C . n C 1 20 THR 20 20 20 THR THR C . n C 1 21 LEU 21 21 21 LEU LEU C . n C 1 22 ALA 22 22 22 ALA ALA C . n C 1 23 LEU 23 23 23 LEU LEU C . n C 1 24 ILE 24 24 24 ILE ILE C . n C 1 25 ALA 25 25 25 ALA ALA C . n C 1 26 LYS 26 26 26 LYS LYS C . n C 1 27 ASN 27 27 27 ASN ASN C . n C 1 28 GLY 28 28 28 GLY GLY C . n C 1 29 PRO 29 29 29 PRO PRO C . n C 1 30 TYR 30 30 30 TYR TYR C . n C 1 31 PRO 31 31 31 PRO PRO C . n C 1 32 TYR 32 32 32 TYR TYR C . n C 1 33 ASN 33 33 33 ASN ASN C . n C 1 34 ARG 34 34 34 ARG ARG C . n C 1 35 ASP 35 35 35 ASP ASP C . n C 1 36 GLY 36 36 36 GLY GLY C . n C 1 37 VAL 37 37 37 VAL VAL C . n C 1 38 VAL 38 38 38 VAL VAL C . n C 1 39 PHE 39 39 39 PHE PHE C . n C 1 40 GLU 40 40 40 GLU GLU C . n C 1 41 ASN 41 41 41 ASN ASN C . n C 1 42 ARG 42 42 42 ARG ARG C . n C 1 43 GLU 43 43 43 GLU GLU C . n C 1 44 SER 44 44 44 SER SER C . n C 1 45 ARG 45 45 45 ARG ARG C . n C 1 46 LEU 46 46 46 LEU LEU C . n C 1 47 PRO 47 47 47 PRO PRO C . n C 1 48 LYS 48 48 48 LYS LYS C . n C 1 49 LYS 49 49 49 LYS LYS C . n C 1 50 GLY 50 50 50 GLY GLY C . n C 1 51 ASN 51 51 51 ASN ASN C . n C 1 52 GLY 52 52 52 GLY GLY C . n C 1 53 TYR 53 53 53 TYR TYR C . n C 1 54 TYR 54 54 54 TYR TYR C . n C 1 55 HIS 55 55 55 HIS HIS C . n C 1 56 GLU 56 56 56 GLU GLU C . n C 1 57 PHE 57 57 57 PHE PHE C . n C 1 58 THR 58 58 58 THR THR C . n C 1 59 VAL 59 59 59 VAL VAL C . n C 1 60 VAL 60 60 60 VAL VAL C . n C 1 61 THR 61 61 61 THR THR C . n C 1 62 PRO 62 62 62 PRO PRO C . n C 1 63 GLY 63 63 63 GLY GLY C . n C 1 64 SER 64 64 64 SER SER C . n C 1 65 ASN 65 65 ? ? ? C . n C 1 66 ASP 66 66 ? ? ? C . n C 1 67 ARG 67 67 67 ARG ARG C . n C 1 68 GLY 68 68 68 GLY GLY C . n C 1 69 THR 69 69 69 THR THR C . n C 1 70 ARG 70 70 70 ARG ARG C . n C 1 71 ARG 71 71 71 ARG ARG C . n C 1 72 VAL 72 72 72 VAL VAL C . n C 1 73 VAL 73 73 73 VAL VAL C . n C 1 74 THR 74 74 74 THR THR C . n C 1 75 GLY 75 75 75 GLY GLY C . n C 1 76 GLY 76 76 76 GLY GLY C . n C 1 77 TYR 77 77 77 TYR TYR C . n C 1 78 GLY 78 78 78 GLY GLY C . n C 1 79 GLU 79 79 79 GLU GLU C . n C 1 80 GLN 80 80 80 GLN GLN C . n C 1 81 TYR 81 81 81 TYR TYR C . n C 1 82 TRP 82 82 82 TRP TRP C . n C 1 83 SER 83 83 83 SER SER C . n C 1 84 PRO 84 84 84 PRO PRO C . n C 1 85 ASP 85 85 85 ASP ASP C . n C 1 86 HIS 86 86 86 HIS HIS C . n C 1 87 TYR 87 87 87 TYR TYR C . n C 1 88 ALA 88 88 88 ALA ALA C . n C 1 89 THR 89 89 89 THR THR C . n C 1 90 PHE 90 90 90 PHE PHE C . n C 1 91 GLN 91 91 91 GLN GLN C . n C 1 92 GLU 92 92 92 GLU GLU C . n C 1 93 ILE 93 93 93 ILE ILE C . n C 1 94 ASP 94 94 94 ASP ASP C . n C 1 95 PRO 95 95 95 PRO PRO C . n C 1 96 ARG 96 96 96 ARG ARG C . n C 1 97 CYS 97 97 97 CYS CYS C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 BGC 1 99 99 BGC GLC A . E 3 SO4 1 98 98 SO4 SO4 A . F 3 SO4 1 100 100 SO4 SO4 B . G 4 2GP 1 98 98 2GP 2GP B . H 3 SO4 1 198 98 SO4 SO4 C . I 5 HOH 1 100 1 HOH HOH A . I 5 HOH 2 101 3 HOH HOH A . I 5 HOH 3 102 4 HOH HOH A . I 5 HOH 4 103 6 HOH HOH A . I 5 HOH 5 104 10 HOH HOH A . I 5 HOH 6 105 11 HOH HOH A . I 5 HOH 7 106 12 HOH HOH A . I 5 HOH 8 107 15 HOH HOH A . I 5 HOH 9 108 16 HOH HOH A . I 5 HOH 10 109 18 HOH HOH A . I 5 HOH 11 110 20 HOH HOH A . I 5 HOH 12 111 21 HOH HOH A . I 5 HOH 13 112 22 HOH HOH A . I 5 HOH 14 113 23 HOH HOH A . I 5 HOH 15 114 24 HOH HOH A . I 5 HOH 16 115 27 HOH HOH A . I 5 HOH 17 116 28 HOH HOH A . I 5 HOH 18 117 31 HOH HOH A . I 5 HOH 19 118 32 HOH HOH A . I 5 HOH 20 119 33 HOH HOH A . I 5 HOH 21 120 35 HOH HOH A . I 5 HOH 22 121 39 HOH HOH A . I 5 HOH 23 122 41 HOH HOH A . I 5 HOH 24 123 42 HOH HOH A . I 5 HOH 25 124 43 HOH HOH A . I 5 HOH 26 125 46 HOH HOH A . I 5 HOH 27 126 47 HOH HOH A . I 5 HOH 28 127 49 HOH HOH A . I 5 HOH 29 128 52 HOH HOH A . I 5 HOH 30 129 53 HOH HOH A . I 5 HOH 31 130 54 HOH HOH A . I 5 HOH 32 131 58 HOH HOH A . I 5 HOH 33 132 59 HOH HOH A . I 5 HOH 34 133 60 HOH HOH A . I 5 HOH 35 134 61 HOH HOH A . I 5 HOH 36 135 62 HOH HOH A . I 5 HOH 37 136 63 HOH HOH A . I 5 HOH 38 138 72 HOH HOH A . I 5 HOH 39 139 77 HOH HOH A . I 5 HOH 40 140 80 HOH HOH A . I 5 HOH 41 141 82 HOH HOH A . I 5 HOH 42 142 85 HOH HOH A . I 5 HOH 43 143 88 HOH HOH A . I 5 HOH 44 144 90 HOH HOH A . I 5 HOH 45 145 91 HOH HOH A . I 5 HOH 46 146 92 HOH HOH A . I 5 HOH 47 147 93 HOH HOH A . I 5 HOH 48 148 95 HOH HOH A . I 5 HOH 49 149 96 HOH HOH A . I 5 HOH 50 150 97 HOH HOH A . I 5 HOH 51 151 98 HOH HOH A . I 5 HOH 52 152 102 HOH HOH A . I 5 HOH 53 153 105 HOH HOH A . I 5 HOH 54 154 112 HOH HOH A . I 5 HOH 55 155 113 HOH HOH A . I 5 HOH 56 156 114 HOH HOH A . I 5 HOH 57 157 116 HOH HOH A . I 5 HOH 58 158 121 HOH HOH A . I 5 HOH 59 159 122 HOH HOH A . I 5 HOH 60 160 123 HOH HOH A . I 5 HOH 61 161 129 HOH HOH A . I 5 HOH 62 162 130 HOH HOH A . I 5 HOH 63 163 132 HOH HOH A . I 5 HOH 64 164 135 HOH HOH A . I 5 HOH 65 165 137 HOH HOH A . I 5 HOH 66 166 140 HOH HOH A . I 5 HOH 67 167 141 HOH HOH A . I 5 HOH 68 168 142 HOH HOH A . I 5 HOH 69 169 144 HOH HOH A . I 5 HOH 70 170 148 HOH HOH A . I 5 HOH 71 171 152 HOH HOH A . I 5 HOH 72 172 159 HOH HOH A . I 5 HOH 73 173 161 HOH HOH A . I 5 HOH 74 174 162 HOH HOH A . I 5 HOH 75 175 163 HOH HOH A . I 5 HOH 76 176 164 HOH HOH A . I 5 HOH 77 177 165 HOH HOH A . I 5 HOH 78 178 166 HOH HOH A . I 5 HOH 79 179 170 HOH HOH A . I 5 HOH 80 180 172 HOH HOH A . I 5 HOH 81 181 174 HOH HOH A . I 5 HOH 82 182 175 HOH HOH A . I 5 HOH 83 184 179 HOH HOH A . I 5 HOH 84 185 180 HOH HOH A . I 5 HOH 85 186 181 HOH HOH A . I 5 HOH 86 189 187 HOH HOH A . I 5 HOH 87 191 193 HOH HOH A . I 5 HOH 88 192 195 HOH HOH A . I 5 HOH 89 193 198 HOH HOH A . I 5 HOH 90 194 199 HOH HOH A . I 5 HOH 91 195 205 HOH HOH A . I 5 HOH 92 196 206 HOH HOH A . I 5 HOH 93 197 209 HOH HOH A . I 5 HOH 94 198 217 HOH HOH A . I 5 HOH 95 199 218 HOH HOH A . I 5 HOH 96 200 219 HOH HOH A . I 5 HOH 97 201 222 HOH HOH A . I 5 HOH 98 202 223 HOH HOH A . I 5 HOH 99 203 231 HOH HOH A . I 5 HOH 100 204 233 HOH HOH A . I 5 HOH 101 205 234 HOH HOH A . I 5 HOH 102 206 236 HOH HOH A . I 5 HOH 103 207 243 HOH HOH A . I 5 HOH 104 208 249 HOH HOH A . I 5 HOH 105 209 254 HOH HOH A . I 5 HOH 106 210 256 HOH HOH A . I 5 HOH 107 211 258 HOH HOH A . I 5 HOH 108 212 260 HOH HOH A . I 5 HOH 109 213 261 HOH HOH A . I 5 HOH 110 214 262 HOH HOH A . I 5 HOH 111 215 264 HOH HOH A . I 5 HOH 112 216 270 HOH HOH A . I 5 HOH 113 217 272 HOH HOH A . I 5 HOH 114 218 273 HOH HOH A . I 5 HOH 115 219 275 HOH HOH A . I 5 HOH 116 220 277 HOH HOH A . I 5 HOH 117 238 167 HOH HOH A . I 5 HOH 118 241 183 HOH HOH A . J 5 HOH 1 183 176 HOH HOH B . J 5 HOH 2 184 182 HOH HOH B . J 5 HOH 3 185 185 HOH HOH B . J 5 HOH 4 186 192 HOH HOH B . J 5 HOH 5 187 2 HOH HOH B . J 5 HOH 6 188 5 HOH HOH B . J 5 HOH 7 189 7 HOH HOH B . J 5 HOH 8 190 13 HOH HOH B . J 5 HOH 9 191 19 HOH HOH B . J 5 HOH 10 192 25 HOH HOH B . J 5 HOH 11 193 26 HOH HOH B . J 5 HOH 12 194 29 HOH HOH B . J 5 HOH 13 195 30 HOH HOH B . J 5 HOH 14 196 36 HOH HOH B . J 5 HOH 15 197 37 HOH HOH B . J 5 HOH 16 198 38 HOH HOH B . J 5 HOH 17 199 40 HOH HOH B . J 5 HOH 18 200 44 HOH HOH B . J 5 HOH 19 201 45 HOH HOH B . J 5 HOH 20 202 48 HOH HOH B . J 5 HOH 21 203 50 HOH HOH B . J 5 HOH 22 204 51 HOH HOH B . J 5 HOH 23 205 55 HOH HOH B . J 5 HOH 24 206 65 HOH HOH B . J 5 HOH 25 207 66 HOH HOH B . J 5 HOH 26 208 68 HOH HOH B . J 5 HOH 27 209 70 HOH HOH B . J 5 HOH 28 210 73 HOH HOH B . J 5 HOH 29 211 75 HOH HOH B . J 5 HOH 30 212 76 HOH HOH B . J 5 HOH 31 213 83 HOH HOH B . J 5 HOH 32 214 87 HOH HOH B . J 5 HOH 33 215 94 HOH HOH B . J 5 HOH 34 216 100 HOH HOH B . J 5 HOH 35 217 101 HOH HOH B . J 5 HOH 36 218 108 HOH HOH B . J 5 HOH 37 219 109 HOH HOH B . J 5 HOH 38 220 111 HOH HOH B . J 5 HOH 39 221 118 HOH HOH B . J 5 HOH 40 222 120 HOH HOH B . J 5 HOH 41 223 125 HOH HOH B . J 5 HOH 42 224 126 HOH HOH B . J 5 HOH 43 225 128 HOH HOH B . J 5 HOH 44 226 134 HOH HOH B . J 5 HOH 45 227 143 HOH HOH B . J 5 HOH 46 228 145 HOH HOH B . J 5 HOH 47 229 150 HOH HOH B . J 5 HOH 48 230 154 HOH HOH B . J 5 HOH 49 231 155 HOH HOH B . J 5 HOH 50 232 157 HOH HOH B . J 5 HOH 51 233 158 HOH HOH B . J 5 HOH 52 234 160 HOH HOH B . J 5 HOH 53 235 169 HOH HOH B . J 5 HOH 54 236 171 HOH HOH B . J 5 HOH 55 237 177 HOH HOH B . J 5 HOH 56 238 178 HOH HOH B . J 5 HOH 57 239 188 HOH HOH B . J 5 HOH 58 240 189 HOH HOH B . J 5 HOH 59 241 191 HOH HOH B . J 5 HOH 60 242 194 HOH HOH B . J 5 HOH 61 243 196 HOH HOH B . J 5 HOH 62 244 200 HOH HOH B . J 5 HOH 63 245 201 HOH HOH B . J 5 HOH 64 246 202 HOH HOH B . J 5 HOH 65 247 204 HOH HOH B . J 5 HOH 66 248 208 HOH HOH B . J 5 HOH 67 249 211 HOH HOH B . J 5 HOH 68 250 213 HOH HOH B . J 5 HOH 69 251 214 HOH HOH B . J 5 HOH 70 252 216 HOH HOH B . J 5 HOH 71 253 224 HOH HOH B . J 5 HOH 72 254 225 HOH HOH B . J 5 HOH 73 255 228 HOH HOH B . J 5 HOH 74 256 229 HOH HOH B . J 5 HOH 75 257 230 HOH HOH B . J 5 HOH 76 258 232 HOH HOH B . J 5 HOH 77 259 238 HOH HOH B . J 5 HOH 78 260 239 HOH HOH B . J 5 HOH 79 261 240 HOH HOH B . J 5 HOH 80 262 247 HOH HOH B . J 5 HOH 81 263 252 HOH HOH B . J 5 HOH 82 264 255 HOH HOH B . J 5 HOH 83 265 259 HOH HOH B . J 5 HOH 84 266 265 HOH HOH B . J 5 HOH 85 267 268 HOH HOH B . J 5 HOH 86 268 269 HOH HOH B . K 5 HOH 1 137 64 HOH HOH C . K 5 HOH 2 177 248 HOH HOH C . K 5 HOH 3 199 8 HOH HOH C . K 5 HOH 4 200 9 HOH HOH C . K 5 HOH 5 201 14 HOH HOH C . K 5 HOH 6 202 17 HOH HOH C . K 5 HOH 7 203 34 HOH HOH C . K 5 HOH 8 204 56 HOH HOH C . K 5 HOH 9 205 57 HOH HOH C . K 5 HOH 10 206 67 HOH HOH C . K 5 HOH 11 207 69 HOH HOH C . K 5 HOH 12 208 71 HOH HOH C . K 5 HOH 13 209 74 HOH HOH C . K 5 HOH 14 210 78 HOH HOH C . K 5 HOH 15 211 79 HOH HOH C . K 5 HOH 16 212 81 HOH HOH C . K 5 HOH 17 213 84 HOH HOH C . K 5 HOH 18 214 86 HOH HOH C . K 5 HOH 19 215 89 HOH HOH C . K 5 HOH 20 216 99 HOH HOH C . K 5 HOH 21 217 103 HOH HOH C . K 5 HOH 22 218 104 HOH HOH C . K 5 HOH 23 219 106 HOH HOH C . K 5 HOH 24 220 107 HOH HOH C . K 5 HOH 25 221 110 HOH HOH C . K 5 HOH 26 222 115 HOH HOH C . K 5 HOH 27 223 117 HOH HOH C . K 5 HOH 28 224 119 HOH HOH C . K 5 HOH 29 225 124 HOH HOH C . K 5 HOH 30 226 127 HOH HOH C . K 5 HOH 31 227 131 HOH HOH C . K 5 HOH 32 228 133 HOH HOH C . K 5 HOH 33 229 136 HOH HOH C . K 5 HOH 34 230 138 HOH HOH C . K 5 HOH 35 231 139 HOH HOH C . K 5 HOH 36 232 146 HOH HOH C . K 5 HOH 37 233 147 HOH HOH C . K 5 HOH 38 234 149 HOH HOH C . K 5 HOH 39 235 151 HOH HOH C . K 5 HOH 40 236 153 HOH HOH C . K 5 HOH 41 237 156 HOH HOH C . K 5 HOH 42 239 168 HOH HOH C . K 5 HOH 43 240 173 HOH HOH C . K 5 HOH 44 242 184 HOH HOH C . K 5 HOH 45 243 186 HOH HOH C . K 5 HOH 46 244 190 HOH HOH C . K 5 HOH 47 245 197 HOH HOH C . K 5 HOH 48 246 203 HOH HOH C . K 5 HOH 49 247 207 HOH HOH C . K 5 HOH 50 248 210 HOH HOH C . K 5 HOH 51 249 212 HOH HOH C . K 5 HOH 52 250 215 HOH HOH C . K 5 HOH 53 251 220 HOH HOH C . K 5 HOH 54 252 221 HOH HOH C . K 5 HOH 55 253 226 HOH HOH C . K 5 HOH 56 254 227 HOH HOH C . K 5 HOH 57 255 235 HOH HOH C . K 5 HOH 58 256 237 HOH HOH C . K 5 HOH 59 257 241 HOH HOH C . K 5 HOH 60 258 242 HOH HOH C . K 5 HOH 61 259 244 HOH HOH C . K 5 HOH 62 260 245 HOH HOH C . K 5 HOH 63 261 246 HOH HOH C . K 5 HOH 64 262 250 HOH HOH C . K 5 HOH 65 263 251 HOH HOH C . K 5 HOH 66 264 253 HOH HOH C . K 5 HOH 67 265 257 HOH HOH C . K 5 HOH 68 266 263 HOH HOH C . K 5 HOH 69 267 266 HOH HOH C . K 5 HOH 70 268 267 HOH HOH C . K 5 HOH 71 269 271 HOH HOH C . K 5 HOH 72 270 274 HOH HOH C . K 5 HOH 73 271 276 HOH HOH C . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,E,I 2 1 B,F,G,J 3 1 C,H,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 215 ? I HOH . 2 1 A HOH 220 ? I HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-06-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-11-01 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' diffrn_source 3 3 'Structure model' entity 4 3 'Structure model' pdbx_chem_comp_identifier 5 3 'Structure model' pdbx_entity_nonpoly 6 3 'Structure model' struct_site 7 3 'Structure model' struct_site_gen 8 4 'Structure model' chem_comp 9 4 'Structure model' chem_comp_atom 10 4 'Structure model' chem_comp_bond 11 4 'Structure model' database_2 12 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.name' 2 3 'Structure model' '_chem_comp.type' 3 3 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 4 'Structure model' '_chem_comp.pdbx_synonyms' 7 4 'Structure model' '_database_2.pdbx_DOI' 8 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 67.0556 -3.7823 -26.7731 0.0757 -0.1392 -0.0354 -0.1368 0.0177 -0.0116 5.8264 6.1342 5.4718 -1.0157 -3.0054 0.8760 0.2377 0.0642 0.3906 0.0160 -0.0989 0.2261 -0.8594 0.5166 -0.1388 'X-RAY DIFFRACTION' 2 ? refined 62.2561 -15.7888 -18.8526 0.0235 -0.0731 0.0105 -0.0391 0.0073 -0.0008 2.3266 0.8905 2.5950 -0.5894 -0.5198 0.4263 0.0236 -0.1757 -0.0736 0.1128 -0.0384 0.0333 -0.0520 0.1936 0.0148 'X-RAY DIFFRACTION' 3 ? refined 66.5854 -11.1994 -18.6462 0.0266 -0.0441 0.0055 -0.0647 0.0021 -0.0139 5.2736 1.6037 2.8635 1.2995 0.9234 0.1245 0.2232 -0.0425 -0.3492 0.1072 -0.0533 -0.2138 -0.1454 0.3995 -0.1699 'X-RAY DIFFRACTION' 4 ? refined 60.2174 -2.4020 -28.6953 0.1552 -0.1166 -0.0293 -0.0303 0.0132 0.0214 5.9241 7.2201 31.3904 -5.5963 9.5492 -3.4590 0.4271 -0.1602 -0.0415 -0.3803 -0.2576 0.7134 -1.0108 -1.5079 -0.1695 'X-RAY DIFFRACTION' 5 ? refined 66.0059 -37.3564 13.1487 -0.0004 -0.0763 -0.0566 0.0510 0.0400 0.0093 9.1713 1.7448 2.6542 -1.7258 1.6654 -0.8893 0.0353 0.5452 -0.2078 -0.0714 -0.0523 0.0986 0.5775 -0.0898 0.0170 'X-RAY DIFFRACTION' 6 ? refined 51.4088 -33.5751 19.6782 -0.1391 -0.0045 0.1156 -0.0344 0.0865 -0.0200 9.4862 17.8156 17.7423 -0.9845 1.7102 -17.7507 -0.0553 0.4723 -0.2221 0.2746 0.3685 1.0705 0.3455 -1.0700 -0.3132 'X-RAY DIFFRACTION' 7 ? refined 65.6688 -31.2665 27.0567 -0.0226 -0.0217 -0.0531 0.0634 0.0215 0.0431 5.7715 3.4342 2.5666 -1.4256 -0.4074 0.9167 -0.2417 -0.6542 -0.2366 0.5056 0.1042 -0.0621 0.1662 0.2505 0.1374 'X-RAY DIFFRACTION' 8 ? refined 65.0414 -38.1581 18.7274 -0.0286 -0.0737 0.0402 0.0519 0.0576 0.0260 2.6445 2.2963 3.4872 0.1792 0.0562 -0.5635 -0.0917 -0.1070 -0.3520 -0.0086 -0.1159 0.1149 0.4357 0.0643 0.2076 'X-RAY DIFFRACTION' 9 ? refined 64.3258 -17.0737 11.6113 -0.0579 0.0018 -0.0674 0.0288 -0.0266 0.0528 7.0319 1.9461 2.9158 -1.3740 -0.8529 -0.2386 0.0375 0.2829 0.1172 0.0987 -0.2570 -0.2341 -0.3240 0.1321 0.2195 'X-RAY DIFFRACTION' 10 ? refined 59.1627 -24.5436 -3.9522 -0.1099 0.2045 -0.0603 0.0907 -0.0072 -0.0824 0.7353 6.5556 6.7851 1.5541 0.5263 -2.4535 0.0559 0.0945 -0.1982 -0.5652 -0.5030 0.3682 0.1725 -0.7000 0.4472 'X-RAY DIFFRACTION' 11 ? refined 62.9896 -17.9031 5.8660 -0.0559 0.0492 -0.0547 0.0766 -0.0054 0.0347 3.9819 4.7170 5.1465 0.4106 -0.6042 0.3863 0.2756 0.3653 0.2317 0.1046 -0.4288 -0.1538 -0.4532 -0.1838 0.1532 'X-RAY DIFFRACTION' 12 ? refined 69.9765 -19.9960 3.4564 -0.1266 0.0412 -0.0310 0.0433 0.0374 0.0753 11.1100 3.0566 11.8604 -5.3552 4.0861 -1.3759 0.3909 0.5776 -0.5801 -0.0112 -0.3129 0.0066 -0.4067 0.2572 -0.0780 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 4 A 4 A 16 A 16 ? 'X-RAY DIFFRACTION' ? 2 2 A 17 A 17 A 61 A 61 ? 'X-RAY DIFFRACTION' ? 3 3 A 62 A 62 A 91 A 91 ? 'X-RAY DIFFRACTION' ? 4 4 A 92 A 92 A 97 A 97 ? 'X-RAY DIFFRACTION' ? 5 5 B 1 B 1 B 25 B 25 ? 'X-RAY DIFFRACTION' ? 6 6 B 26 B 26 B 34 B 34 ? 'X-RAY DIFFRACTION' ? 7 7 B 35 B 35 B 58 B 58 ? 'X-RAY DIFFRACTION' ? 8 8 B 59 B 59 B 97 B 97 ? 'X-RAY DIFFRACTION' ? 9 9 C 5 C 5 C 37 C 37 ? 'X-RAY DIFFRACTION' ? 10 10 C 38 C 38 C 53 C 53 ? 'X-RAY DIFFRACTION' ? 11 11 C 54 C 54 C 82 C 82 ? 'X-RAY DIFFRACTION' ? 12 12 C 83 C 83 C 97 C 97 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 PRO _pdbx_validate_close_contact.auth_seq_id_1 62 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 209 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.15 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 70 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 70 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 70 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.21 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -4.09 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id HIS _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 86 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 72.42 _pdbx_validate_torsion.psi 42.26 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A ASP 2 ? A ASP 2 3 1 Y 1 A PRO 3 ? A PRO 3 4 1 Y 1 A SER 64 ? A SER 64 5 1 Y 1 A ASN 65 ? A ASN 65 6 1 Y 1 B GLY 63 ? B GLY 63 7 1 Y 1 B SER 64 ? B SER 64 8 1 Y 1 B ASN 65 ? B ASN 65 9 1 Y 1 C ALA 1 ? C ALA 1 10 1 Y 1 C ASP 2 ? C ASP 2 11 1 Y 1 C PRO 3 ? C PRO 3 12 1 Y 1 C ALA 4 ? C ALA 4 13 1 Y 1 C ASN 65 ? C ASN 65 14 1 Y 1 C ASP 66 ? C ASP 66 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2GP P P N N 1 2GP O1P O N N 2 2GP O2P O N N 3 2GP O3P O N N 4 2GP "O5'" O N N 5 2GP "C5'" C N N 6 2GP "C4'" C N R 7 2GP "O4'" O N N 8 2GP "C3'" C N R 9 2GP "O3'" O N N 10 2GP "C2'" C N R 11 2GP "O2'" O N N 12 2GP "C1'" C N R 13 2GP N9 N Y N 14 2GP C8 C Y N 15 2GP N7 N Y N 16 2GP C5 C Y N 17 2GP C6 C N N 18 2GP O6 O N N 19 2GP N1 N N N 20 2GP C2 C N N 21 2GP N2 N N N 22 2GP N3 N N N 23 2GP C4 C Y N 24 2GP HOP2 H N N 25 2GP HOP3 H N N 26 2GP "HO5'" H N N 27 2GP "H5'1" H N N 28 2GP "H5'2" H N N 29 2GP "H4'" H N N 30 2GP "H3'" H N N 31 2GP "HO3'" H N N 32 2GP "H2'" H N N 33 2GP "H1'" H N N 34 2GP H8 H N N 35 2GP HN1 H N N 36 2GP HN21 H N N 37 2GP HN22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 BGC C2 C N R 112 BGC C3 C N S 113 BGC C4 C N S 114 BGC C5 C N R 115 BGC C6 C N N 116 BGC C1 C N R 117 BGC O1 O N N 118 BGC O2 O N N 119 BGC O3 O N N 120 BGC O4 O N N 121 BGC O5 O N N 122 BGC O6 O N N 123 BGC H2 H N N 124 BGC H3 H N N 125 BGC H4 H N N 126 BGC H5 H N N 127 BGC H61 H N N 128 BGC H62 H N N 129 BGC H1 H N N 130 BGC HO1 H N N 131 BGC HO2 H N N 132 BGC HO3 H N N 133 BGC HO4 H N N 134 BGC HO6 H N N 135 CYS N N N N 136 CYS CA C N R 137 CYS C C N N 138 CYS O O N N 139 CYS CB C N N 140 CYS SG S N N 141 CYS OXT O N N 142 CYS H H N N 143 CYS H2 H N N 144 CYS HA H N N 145 CYS HB2 H N N 146 CYS HB3 H N N 147 CYS HG H N N 148 CYS HXT H N N 149 GLN N N N N 150 GLN CA C N S 151 GLN C C N N 152 GLN O O N N 153 GLN CB C N N 154 GLN CG C N N 155 GLN CD C N N 156 GLN OE1 O N N 157 GLN NE2 N N N 158 GLN OXT O N N 159 GLN H H N N 160 GLN H2 H N N 161 GLN HA H N N 162 GLN HB2 H N N 163 GLN HB3 H N N 164 GLN HG2 H N N 165 GLN HG3 H N N 166 GLN HE21 H N N 167 GLN HE22 H N N 168 GLN HXT H N N 169 GLU N N N N 170 GLU CA C N S 171 GLU C C N N 172 GLU O O N N 173 GLU CB C N N 174 GLU CG C N N 175 GLU CD C N N 176 GLU OE1 O N N 177 GLU OE2 O N N 178 GLU OXT O N N 179 GLU H H N N 180 GLU H2 H N N 181 GLU HA H N N 182 GLU HB2 H N N 183 GLU HB3 H N N 184 GLU HG2 H N N 185 GLU HG3 H N N 186 GLU HE2 H N N 187 GLU HXT H N N 188 GLY N N N N 189 GLY CA C N N 190 GLY C C N N 191 GLY O O N N 192 GLY OXT O N N 193 GLY H H N N 194 GLY H2 H N N 195 GLY HA2 H N N 196 GLY HA3 H N N 197 GLY HXT H N N 198 HIS N N N N 199 HIS CA C N S 200 HIS C C N N 201 HIS O O N N 202 HIS CB C N N 203 HIS CG C Y N 204 HIS ND1 N Y N 205 HIS CD2 C Y N 206 HIS CE1 C Y N 207 HIS NE2 N Y N 208 HIS OXT O N N 209 HIS H H N N 210 HIS H2 H N N 211 HIS HA H N N 212 HIS HB2 H N N 213 HIS HB3 H N N 214 HIS HD1 H N N 215 HIS HD2 H N N 216 HIS HE1 H N N 217 HIS HE2 H N N 218 HIS HXT H N N 219 HOH O O N N 220 HOH H1 H N N 221 HOH H2 H N N 222 ILE N N N N 223 ILE CA C N S 224 ILE C C N N 225 ILE O O N N 226 ILE CB C N S 227 ILE CG1 C N N 228 ILE CG2 C N N 229 ILE CD1 C N N 230 ILE OXT O N N 231 ILE H H N N 232 ILE H2 H N N 233 ILE HA H N N 234 ILE HB H N N 235 ILE HG12 H N N 236 ILE HG13 H N N 237 ILE HG21 H N N 238 ILE HG22 H N N 239 ILE HG23 H N N 240 ILE HD11 H N N 241 ILE HD12 H N N 242 ILE HD13 H N N 243 ILE HXT H N N 244 LEU N N N N 245 LEU CA C N S 246 LEU C C N N 247 LEU O O N N 248 LEU CB C N N 249 LEU CG C N N 250 LEU CD1 C N N 251 LEU CD2 C N N 252 LEU OXT O N N 253 LEU H H N N 254 LEU H2 H N N 255 LEU HA H N N 256 LEU HB2 H N N 257 LEU HB3 H N N 258 LEU HG H N N 259 LEU HD11 H N N 260 LEU HD12 H N N 261 LEU HD13 H N N 262 LEU HD21 H N N 263 LEU HD22 H N N 264 LEU HD23 H N N 265 LEU HXT H N N 266 LYS N N N N 267 LYS CA C N S 268 LYS C C N N 269 LYS O O N N 270 LYS CB C N N 271 LYS CG C N N 272 LYS CD C N N 273 LYS CE C N N 274 LYS NZ N N N 275 LYS OXT O N N 276 LYS H H N N 277 LYS H2 H N N 278 LYS HA H N N 279 LYS HB2 H N N 280 LYS HB3 H N N 281 LYS HG2 H N N 282 LYS HG3 H N N 283 LYS HD2 H N N 284 LYS HD3 H N N 285 LYS HE2 H N N 286 LYS HE3 H N N 287 LYS HZ1 H N N 288 LYS HZ2 H N N 289 LYS HZ3 H N N 290 LYS HXT H N N 291 PHE N N N N 292 PHE CA C N S 293 PHE C C N N 294 PHE O O N N 295 PHE CB C N N 296 PHE CG C Y N 297 PHE CD1 C Y N 298 PHE CD2 C Y N 299 PHE CE1 C Y N 300 PHE CE2 C Y N 301 PHE CZ C Y N 302 PHE OXT O N N 303 PHE H H N N 304 PHE H2 H N N 305 PHE HA H N N 306 PHE HB2 H N N 307 PHE HB3 H N N 308 PHE HD1 H N N 309 PHE HD2 H N N 310 PHE HE1 H N N 311 PHE HE2 H N N 312 PHE HZ H N N 313 PHE HXT H N N 314 PRO N N N N 315 PRO CA C N S 316 PRO C C N N 317 PRO O O N N 318 PRO CB C N N 319 PRO CG C N N 320 PRO CD C N N 321 PRO OXT O N N 322 PRO H H N N 323 PRO HA H N N 324 PRO HB2 H N N 325 PRO HB3 H N N 326 PRO HG2 H N N 327 PRO HG3 H N N 328 PRO HD2 H N N 329 PRO HD3 H N N 330 PRO HXT H N N 331 SER N N N N 332 SER CA C N S 333 SER C C N N 334 SER O O N N 335 SER CB C N N 336 SER OG O N N 337 SER OXT O N N 338 SER H H N N 339 SER H2 H N N 340 SER HA H N N 341 SER HB2 H N N 342 SER HB3 H N N 343 SER HG H N N 344 SER HXT H N N 345 SO4 S S N N 346 SO4 O1 O N N 347 SO4 O2 O N N 348 SO4 O3 O N N 349 SO4 O4 O N N 350 THR N N N N 351 THR CA C N S 352 THR C C N N 353 THR O O N N 354 THR CB C N R 355 THR OG1 O N N 356 THR CG2 C N N 357 THR OXT O N N 358 THR H H N N 359 THR H2 H N N 360 THR HA H N N 361 THR HB H N N 362 THR HG1 H N N 363 THR HG21 H N N 364 THR HG22 H N N 365 THR HG23 H N N 366 THR HXT H N N 367 TRP N N N N 368 TRP CA C N S 369 TRP C C N N 370 TRP O O N N 371 TRP CB C N N 372 TRP CG C Y N 373 TRP CD1 C Y N 374 TRP CD2 C Y N 375 TRP NE1 N Y N 376 TRP CE2 C Y N 377 TRP CE3 C Y N 378 TRP CZ2 C Y N 379 TRP CZ3 C Y N 380 TRP CH2 C Y N 381 TRP OXT O N N 382 TRP H H N N 383 TRP H2 H N N 384 TRP HA H N N 385 TRP HB2 H N N 386 TRP HB3 H N N 387 TRP HD1 H N N 388 TRP HE1 H N N 389 TRP HE3 H N N 390 TRP HZ2 H N N 391 TRP HZ3 H N N 392 TRP HH2 H N N 393 TRP HXT H N N 394 TYR N N N N 395 TYR CA C N S 396 TYR C C N N 397 TYR O O N N 398 TYR CB C N N 399 TYR CG C Y N 400 TYR CD1 C Y N 401 TYR CD2 C Y N 402 TYR CE1 C Y N 403 TYR CE2 C Y N 404 TYR CZ C Y N 405 TYR OH O N N 406 TYR OXT O N N 407 TYR H H N N 408 TYR H2 H N N 409 TYR HA H N N 410 TYR HB2 H N N 411 TYR HB3 H N N 412 TYR HD1 H N N 413 TYR HD2 H N N 414 TYR HE1 H N N 415 TYR HE2 H N N 416 TYR HH H N N 417 TYR HXT H N N 418 VAL N N N N 419 VAL CA C N S 420 VAL C C N N 421 VAL O O N N 422 VAL CB C N N 423 VAL CG1 C N N 424 VAL CG2 C N N 425 VAL OXT O N N 426 VAL H H N N 427 VAL H2 H N N 428 VAL HA H N N 429 VAL HB H N N 430 VAL HG11 H N N 431 VAL HG12 H N N 432 VAL HG13 H N N 433 VAL HG21 H N N 434 VAL HG22 H N N 435 VAL HG23 H N N 436 VAL HXT H N N 437 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2GP P O1P doub N N 1 2GP P O2P sing N N 2 2GP P O3P sing N N 3 2GP P "O2'" sing N N 4 2GP O2P HOP2 sing N N 5 2GP O3P HOP3 sing N N 6 2GP "O5'" "C5'" sing N N 7 2GP "O5'" "HO5'" sing N N 8 2GP "C5'" "C4'" sing N N 9 2GP "C5'" "H5'1" sing N N 10 2GP "C5'" "H5'2" sing N N 11 2GP "C4'" "O4'" sing N N 12 2GP "C4'" "C3'" sing N N 13 2GP "C4'" "H4'" sing N N 14 2GP "O4'" "C1'" sing N N 15 2GP "C3'" "O3'" sing N N 16 2GP "C3'" "C2'" sing N N 17 2GP "C3'" "H3'" sing N N 18 2GP "O3'" "HO3'" sing N N 19 2GP "C2'" "O2'" sing N N 20 2GP "C2'" "C1'" sing N N 21 2GP "C2'" "H2'" sing N N 22 2GP "C1'" N9 sing N N 23 2GP "C1'" "H1'" sing N N 24 2GP N9 C8 sing Y N 25 2GP N9 C4 sing Y N 26 2GP C8 N7 doub Y N 27 2GP C8 H8 sing N N 28 2GP N7 C5 sing Y N 29 2GP C5 C6 sing N N 30 2GP C5 C4 doub Y N 31 2GP C6 O6 doub N N 32 2GP C6 N1 sing N N 33 2GP N1 C2 sing N N 34 2GP N1 HN1 sing N N 35 2GP C2 N2 sing N N 36 2GP C2 N3 doub N N 37 2GP N2 HN21 sing N N 38 2GP N2 HN22 sing N N 39 2GP N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 BGC C2 C3 sing N N 110 BGC C2 C1 sing N N 111 BGC C2 O2 sing N N 112 BGC C2 H2 sing N N 113 BGC C3 C4 sing N N 114 BGC C3 O3 sing N N 115 BGC C3 H3 sing N N 116 BGC C4 C5 sing N N 117 BGC C4 O4 sing N N 118 BGC C4 H4 sing N N 119 BGC C5 C6 sing N N 120 BGC C5 O5 sing N N 121 BGC C5 H5 sing N N 122 BGC C6 O6 sing N N 123 BGC C6 H61 sing N N 124 BGC C6 H62 sing N N 125 BGC C1 O1 sing N N 126 BGC C1 O5 sing N N 127 BGC C1 H1 sing N N 128 BGC O1 HO1 sing N N 129 BGC O2 HO2 sing N N 130 BGC O3 HO3 sing N N 131 BGC O4 HO4 sing N N 132 BGC O6 HO6 sing N N 133 CYS N CA sing N N 134 CYS N H sing N N 135 CYS N H2 sing N N 136 CYS CA C sing N N 137 CYS CA CB sing N N 138 CYS CA HA sing N N 139 CYS C O doub N N 140 CYS C OXT sing N N 141 CYS CB SG sing N N 142 CYS CB HB2 sing N N 143 CYS CB HB3 sing N N 144 CYS SG HG sing N N 145 CYS OXT HXT sing N N 146 GLN N CA sing N N 147 GLN N H sing N N 148 GLN N H2 sing N N 149 GLN CA C sing N N 150 GLN CA CB sing N N 151 GLN CA HA sing N N 152 GLN C O doub N N 153 GLN C OXT sing N N 154 GLN CB CG sing N N 155 GLN CB HB2 sing N N 156 GLN CB HB3 sing N N 157 GLN CG CD sing N N 158 GLN CG HG2 sing N N 159 GLN CG HG3 sing N N 160 GLN CD OE1 doub N N 161 GLN CD NE2 sing N N 162 GLN NE2 HE21 sing N N 163 GLN NE2 HE22 sing N N 164 GLN OXT HXT sing N N 165 GLU N CA sing N N 166 GLU N H sing N N 167 GLU N H2 sing N N 168 GLU CA C sing N N 169 GLU CA CB sing N N 170 GLU CA HA sing N N 171 GLU C O doub N N 172 GLU C OXT sing N N 173 GLU CB CG sing N N 174 GLU CB HB2 sing N N 175 GLU CB HB3 sing N N 176 GLU CG CD sing N N 177 GLU CG HG2 sing N N 178 GLU CG HG3 sing N N 179 GLU CD OE1 doub N N 180 GLU CD OE2 sing N N 181 GLU OE2 HE2 sing N N 182 GLU OXT HXT sing N N 183 GLY N CA sing N N 184 GLY N H sing N N 185 GLY N H2 sing N N 186 GLY CA C sing N N 187 GLY CA HA2 sing N N 188 GLY CA HA3 sing N N 189 GLY C O doub N N 190 GLY C OXT sing N N 191 GLY OXT HXT sing N N 192 HIS N CA sing N N 193 HIS N H sing N N 194 HIS N H2 sing N N 195 HIS CA C sing N N 196 HIS CA CB sing N N 197 HIS CA HA sing N N 198 HIS C O doub N N 199 HIS C OXT sing N N 200 HIS CB CG sing N N 201 HIS CB HB2 sing N N 202 HIS CB HB3 sing N N 203 HIS CG ND1 sing Y N 204 HIS CG CD2 doub Y N 205 HIS ND1 CE1 doub Y N 206 HIS ND1 HD1 sing N N 207 HIS CD2 NE2 sing Y N 208 HIS CD2 HD2 sing N N 209 HIS CE1 NE2 sing Y N 210 HIS CE1 HE1 sing N N 211 HIS NE2 HE2 sing N N 212 HIS OXT HXT sing N N 213 HOH O H1 sing N N 214 HOH O H2 sing N N 215 ILE N CA sing N N 216 ILE N H sing N N 217 ILE N H2 sing N N 218 ILE CA C sing N N 219 ILE CA CB sing N N 220 ILE CA HA sing N N 221 ILE C O doub N N 222 ILE C OXT sing N N 223 ILE CB CG1 sing N N 224 ILE CB CG2 sing N N 225 ILE CB HB sing N N 226 ILE CG1 CD1 sing N N 227 ILE CG1 HG12 sing N N 228 ILE CG1 HG13 sing N N 229 ILE CG2 HG21 sing N N 230 ILE CG2 HG22 sing N N 231 ILE CG2 HG23 sing N N 232 ILE CD1 HD11 sing N N 233 ILE CD1 HD12 sing N N 234 ILE CD1 HD13 sing N N 235 ILE OXT HXT sing N N 236 LEU N CA sing N N 237 LEU N H sing N N 238 LEU N H2 sing N N 239 LEU CA C sing N N 240 LEU CA CB sing N N 241 LEU CA HA sing N N 242 LEU C O doub N N 243 LEU C OXT sing N N 244 LEU CB CG sing N N 245 LEU CB HB2 sing N N 246 LEU CB HB3 sing N N 247 LEU CG CD1 sing N N 248 LEU CG CD2 sing N N 249 LEU CG HG sing N N 250 LEU CD1 HD11 sing N N 251 LEU CD1 HD12 sing N N 252 LEU CD1 HD13 sing N N 253 LEU CD2 HD21 sing N N 254 LEU CD2 HD22 sing N N 255 LEU CD2 HD23 sing N N 256 LEU OXT HXT sing N N 257 LYS N CA sing N N 258 LYS N H sing N N 259 LYS N H2 sing N N 260 LYS CA C sing N N 261 LYS CA CB sing N N 262 LYS CA HA sing N N 263 LYS C O doub N N 264 LYS C OXT sing N N 265 LYS CB CG sing N N 266 LYS CB HB2 sing N N 267 LYS CB HB3 sing N N 268 LYS CG CD sing N N 269 LYS CG HG2 sing N N 270 LYS CG HG3 sing N N 271 LYS CD CE sing N N 272 LYS CD HD2 sing N N 273 LYS CD HD3 sing N N 274 LYS CE NZ sing N N 275 LYS CE HE2 sing N N 276 LYS CE HE3 sing N N 277 LYS NZ HZ1 sing N N 278 LYS NZ HZ2 sing N N 279 LYS NZ HZ3 sing N N 280 LYS OXT HXT sing N N 281 PHE N CA sing N N 282 PHE N H sing N N 283 PHE N H2 sing N N 284 PHE CA C sing N N 285 PHE CA CB sing N N 286 PHE CA HA sing N N 287 PHE C O doub N N 288 PHE C OXT sing N N 289 PHE CB CG sing N N 290 PHE CB HB2 sing N N 291 PHE CB HB3 sing N N 292 PHE CG CD1 doub Y N 293 PHE CG CD2 sing Y N 294 PHE CD1 CE1 sing Y N 295 PHE CD1 HD1 sing N N 296 PHE CD2 CE2 doub Y N 297 PHE CD2 HD2 sing N N 298 PHE CE1 CZ doub Y N 299 PHE CE1 HE1 sing N N 300 PHE CE2 CZ sing Y N 301 PHE CE2 HE2 sing N N 302 PHE CZ HZ sing N N 303 PHE OXT HXT sing N N 304 PRO N CA sing N N 305 PRO N CD sing N N 306 PRO N H sing N N 307 PRO CA C sing N N 308 PRO CA CB sing N N 309 PRO CA HA sing N N 310 PRO C O doub N N 311 PRO C OXT sing N N 312 PRO CB CG sing N N 313 PRO CB HB2 sing N N 314 PRO CB HB3 sing N N 315 PRO CG CD sing N N 316 PRO CG HG2 sing N N 317 PRO CG HG3 sing N N 318 PRO CD HD2 sing N N 319 PRO CD HD3 sing N N 320 PRO OXT HXT sing N N 321 SER N CA sing N N 322 SER N H sing N N 323 SER N H2 sing N N 324 SER CA C sing N N 325 SER CA CB sing N N 326 SER CA HA sing N N 327 SER C O doub N N 328 SER C OXT sing N N 329 SER CB OG sing N N 330 SER CB HB2 sing N N 331 SER CB HB3 sing N N 332 SER OG HG sing N N 333 SER OXT HXT sing N N 334 SO4 S O1 doub N N 335 SO4 S O2 doub N N 336 SO4 S O3 sing N N 337 SO4 S O4 sing N N 338 THR N CA sing N N 339 THR N H sing N N 340 THR N H2 sing N N 341 THR CA C sing N N 342 THR CA CB sing N N 343 THR CA HA sing N N 344 THR C O doub N N 345 THR C OXT sing N N 346 THR CB OG1 sing N N 347 THR CB CG2 sing N N 348 THR CB HB sing N N 349 THR OG1 HG1 sing N N 350 THR CG2 HG21 sing N N 351 THR CG2 HG22 sing N N 352 THR CG2 HG23 sing N N 353 THR OXT HXT sing N N 354 TRP N CA sing N N 355 TRP N H sing N N 356 TRP N H2 sing N N 357 TRP CA C sing N N 358 TRP CA CB sing N N 359 TRP CA HA sing N N 360 TRP C O doub N N 361 TRP C OXT sing N N 362 TRP CB CG sing N N 363 TRP CB HB2 sing N N 364 TRP CB HB3 sing N N 365 TRP CG CD1 doub Y N 366 TRP CG CD2 sing Y N 367 TRP CD1 NE1 sing Y N 368 TRP CD1 HD1 sing N N 369 TRP CD2 CE2 doub Y N 370 TRP CD2 CE3 sing Y N 371 TRP NE1 CE2 sing Y N 372 TRP NE1 HE1 sing N N 373 TRP CE2 CZ2 sing Y N 374 TRP CE3 CZ3 doub Y N 375 TRP CE3 HE3 sing N N 376 TRP CZ2 CH2 doub Y N 377 TRP CZ2 HZ2 sing N N 378 TRP CZ3 CH2 sing Y N 379 TRP CZ3 HZ3 sing N N 380 TRP CH2 HH2 sing N N 381 TRP OXT HXT sing N N 382 TYR N CA sing N N 383 TYR N H sing N N 384 TYR N H2 sing N N 385 TYR CA C sing N N 386 TYR CA CB sing N N 387 TYR CA HA sing N N 388 TYR C O doub N N 389 TYR C OXT sing N N 390 TYR CB CG sing N N 391 TYR CB HB2 sing N N 392 TYR CB HB3 sing N N 393 TYR CG CD1 doub Y N 394 TYR CG CD2 sing Y N 395 TYR CD1 CE1 sing Y N 396 TYR CD1 HD1 sing N N 397 TYR CD2 CE2 doub Y N 398 TYR CD2 HD2 sing N N 399 TYR CE1 CZ doub Y N 400 TYR CE1 HE1 sing N N 401 TYR CE2 CZ sing Y N 402 TYR CE2 HE2 sing N N 403 TYR CZ OH sing N N 404 TYR OH HH sing N N 405 TYR OXT HXT sing N N 406 VAL N CA sing N N 407 VAL N H sing N N 408 VAL N H2 sing N N 409 VAL CA C sing N N 410 VAL CA CB sing N N 411 VAL CA HA sing N N 412 VAL C O doub N N 413 VAL C OXT sing N N 414 VAL CB CG1 sing N N 415 VAL CB CG2 sing N N 416 VAL CB HB sing N N 417 VAL CG1 HG11 sing N N 418 VAL CG1 HG12 sing N N 419 VAL CG1 HG13 sing N N 420 VAL CG2 HG21 sing N N 421 VAL CG2 HG22 sing N N 422 VAL CG2 HG23 sing N N 423 VAL OXT HXT sing N N 424 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 beta-D-glucopyranose BGC 3 'SULFATE ION' SO4 4 "GUANOSINE-2'-MONOPHOSPHATE" 2GP 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PY3 _pdbx_initial_refinement_model.details ? #