data_3DIR # _entry.id 3DIR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DIR pdb_00003dir 10.2210/pdb3dir/pdb NDB UR0153 ? ? RCSB RCSB048088 ? ? WWPDB D_1000048088 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3DIG . unspecified PDB 3DIL . unspecified PDB 3DIM . unspecified PDB 3DIO . unspecified PDB 3DIQ . unspecified PDB 3DIS . unspecified PDB 3DIX . unspecified PDB 3DIY . unspecified PDB 3DIZ . unspecified PDB 3DJ0 . unspecified PDB 3DJ2 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DIR _pdbx_database_status.recvd_initial_deposition_date 2008-06-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Serganov, A.A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural insights into amino acid binding and gene control by a lysine riboswitch.' _citation.journal_abbrev Nature _citation.journal_volume 455 _citation.page_first 1263 _citation.page_last 1267 _citation.year 2008 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18784651 _citation.pdbx_database_id_DOI 10.1038/nature07326 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serganov, A.' 1 ? primary 'Huang, L.' 2 ? primary 'Patel, D.J.' 3 ? # _cell.entry_id 3DIR _cell.length_a 54.805 _cell.length_b 78.839 _cell.length_c 143.318 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DIR _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (174-MER)' 56795.555 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 11 ? ? ? ? 4 non-polymer syn 'N~6~-[(1Z)-ethanimidoyl]-L-lysine' 187.239 1 ? ? ? ? 5 water nat water 18.015 11 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(GTP)GCCGACGGAGGCGCGCCCGAGAUGAGUAGGCUGUCCCAUCAGGGGAGGAAUCGGGGACGGCUGAAAGGCGAGGGC GCCGAAGGGUGCAGAGUUCCUCCCGCUCUGCAUGCCUGGGGGUAUGGGGAAUACCCAUACCACUGUCACGGAGGUCUCUC CGUGGAGAGCCGUCGGU(CCC) ; _entity_poly.pdbx_seq_one_letter_code_can ;GGCCGACGGAGGCGCGCCCGAGAUGAGUAGGCUGUCCCAUCAGGGGAGGAAUCGGGGACGGCUGAAAGGCGAGGGCGCCG AAGGGUGCAGAGUUCCUCCCGCUCUGCAUGCCUGGGGGUAUGGGGAAUACCCAUACCACUGUCACGGAGGUCUCUCCGUG GAGAGCCGUCGGUC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 C n 1 4 C n 1 5 G n 1 6 A n 1 7 C n 1 8 G n 1 9 G n 1 10 A n 1 11 G n 1 12 G n 1 13 C n 1 14 G n 1 15 C n 1 16 G n 1 17 C n 1 18 C n 1 19 C n 1 20 G n 1 21 A n 1 22 G n 1 23 A n 1 24 U n 1 25 G n 1 26 A n 1 27 G n 1 28 U n 1 29 A n 1 30 G n 1 31 G n 1 32 C n 1 33 U n 1 34 G n 1 35 U n 1 36 C n 1 37 C n 1 38 C n 1 39 A n 1 40 U n 1 41 C n 1 42 A n 1 43 G n 1 44 G n 1 45 G n 1 46 G n 1 47 A n 1 48 G n 1 49 G n 1 50 A n 1 51 A n 1 52 U n 1 53 C n 1 54 G n 1 55 G n 1 56 G n 1 57 G n 1 58 A n 1 59 C n 1 60 G n 1 61 G n 1 62 C n 1 63 U n 1 64 G n 1 65 A n 1 66 A n 1 67 A n 1 68 G n 1 69 G n 1 70 C n 1 71 G n 1 72 A n 1 73 G n 1 74 G n 1 75 G n 1 76 C n 1 77 G n 1 78 C n 1 79 C n 1 80 G n 1 81 A n 1 82 A n 1 83 G n 1 84 G n 1 85 G n 1 86 U n 1 87 G n 1 88 C n 1 89 A n 1 90 G n 1 91 A n 1 92 G n 1 93 U n 1 94 U n 1 95 C n 1 96 C n 1 97 U n 1 98 C n 1 99 C n 1 100 C n 1 101 G n 1 102 C n 1 103 U n 1 104 C n 1 105 U n 1 106 G n 1 107 C n 1 108 A n 1 109 U n 1 110 G n 1 111 C n 1 112 C n 1 113 U n 1 114 G n 1 115 G n 1 116 G n 1 117 G n 1 118 G n 1 119 U n 1 120 A n 1 121 U n 1 122 G n 1 123 G n 1 124 G n 1 125 G n 1 126 A n 1 127 A n 1 128 U n 1 129 A n 1 130 C n 1 131 C n 1 132 C n 1 133 A n 1 134 U n 1 135 A n 1 136 C n 1 137 C n 1 138 A n 1 139 C n 1 140 U n 1 141 G n 1 142 U n 1 143 C n 1 144 A n 1 145 C n 1 146 G n 1 147 G n 1 148 A n 1 149 G n 1 150 G n 1 151 U n 1 152 C n 1 153 U n 1 154 C n 1 155 U n 1 156 C n 1 157 C n 1 158 G n 1 159 U n 1 160 G n 1 161 G n 1 162 A n 1 163 G n 1 164 A n 1 165 G n 1 166 C n 1 167 C n 1 168 G n 1 169 U n 1 170 C n 1 171 G n 1 172 G n 1 173 U n 1 174 CCC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'In vitro transcribed RNA from the Thermotoga maritima MSB8 asd gene' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3DIR _struct_ref.pdbx_db_accession 3DIR _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DIR _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3DIR _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 174 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 IEL 'L-peptide linking' n 'N~6~-[(1Z)-ethanimidoyl]-L-lysine' ? 'C8 H17 N3 O2' 187.239 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 3DIR _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.73 _exptl_crystal.density_percent_sol 54.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.7 _exptl_crystal_grow.pdbx_details '18% PEG 4000, 0.1M Sodium Citrate, 20% isopropanol, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'Sodium Citrate' ? ? ? 1 3 1 isopropanol ? ? ? 1 4 2 'PEG 4000' ? ? ? 1 5 2 'Sodium Citrate' ? ? ? 1 6 2 isopropanol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 3DIR _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.90 _reflns.d_resolution_low 20.0 _reflns.number_all ? _reflns.number_obs 13631 _reflns.percent_possible_obs 94.3 _reflns.pdbx_Rmerge_I_obs 0.12 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 44.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.d_res_high 2.9 _reflns_shell.d_res_low 3.0 _reflns_shell.percent_possible_all 82.5 _reflns_shell.Rmerge_I_obs 0.361 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 44.5 _reflns_shell.pdbx_redundancy 4.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1405 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs 1159 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.entry_id 3DIR _refine.ls_number_reflns_obs 12823 _refine.ls_number_reflns_all 13578 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.90 _refine.ls_percent_reflns_obs 94.44 _refine.ls_R_factor_obs 0.17966 _refine.ls_R_factor_all 0.17966 _refine.ls_R_factor_R_work 0.17797 _refine.ls_R_factor_R_free 0.21132 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 688 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.948 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'pdb entry 3DIL' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model tls _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free 0.346 _refine.overall_SU_ML 0.264 _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3DIR _refine_analyze.Luzzati_coordinate_error_obs 0.264 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3760 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 11 _refine_hist.number_atoms_total 3796 _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.021 ? 4220 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.345 3.000 ? 6583 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1843 'X-RAY DIFFRACTION' ? r_nbd_refined 0.158 0.200 ? 1481 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.269 0.200 ? 2571 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.140 0.200 ? 131 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.152 0.200 ? 1 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.166 0.200 ? 24 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.249 0.200 ? 8 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.900 _refine_ls_shell.d_res_low 2.974 _refine_ls_shell.number_reflns_R_work 793 _refine_ls_shell.R_factor_R_work 0.37 _refine_ls_shell.percent_reflns_obs 82.16 _refine_ls_shell.R_factor_R_free 0.452 _refine_ls_shell.R_factor_R_free_error 0.346 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1009 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_obs ? # _struct.entry_id 3DIR _struct.title 'Crystallization of the Thermotoga maritima lysine riboswitch bound to N6-1-iminoethyl-L-Lysine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DIR _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'riboswitch, Lysine, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 4 ? O N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GTP 1 A G 2 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale2 covale both ? A U 173 "O3'" ? ? ? 1_555 A CCC 174 P ? ? A U 173 A CCC 174 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? A G 9 O6 ? ? ? 1_555 C NA . NA ? ? A G 9 A NA 201 1_555 ? ? ? ? ? ? ? 2.981 ? ? metalc2 metalc ? ? A G 11 OP1 ? ? ? 1_555 G NA . NA ? ? A G 11 A NA 205 1_555 ? ? ? ? ? ? ? 2.830 ? ? metalc3 metalc ? ? A G 11 OP2 ? ? ? 1_555 G NA . NA ? ? A G 11 A NA 205 1_555 ? ? ? ? ? ? ? 2.510 ? ? metalc4 metalc ? ? A G 12 O6 ? ? ? 1_555 G NA . NA ? ? A G 12 A NA 205 1_555 ? ? ? ? ? ? ? 2.735 ? ? metalc5 metalc ? ? A G 20 O6 ? ? ? 1_555 E NA . NA ? ? A G 20 A NA 203 1_555 ? ? ? ? ? ? ? 2.500 ? ? metalc6 metalc ? ? A G 69 O6 ? ? ? 1_555 F NA . NA ? ? A G 69 A NA 204 1_555 ? ? ? ? ? ? ? 2.740 ? ? metalc7 metalc ? ? A G 71 O6 ? ? ? 1_555 E NA . NA ? ? A G 71 A NA 203 1_555 ? ? ? ? ? ? ? 2.958 ? ? metalc8 metalc ? ? A G 172 O6 ? ? ? 1_555 I NA . NA ? ? A G 172 A NA 207 1_555 ? ? ? ? ? ? ? 2.588 ? ? metalc9 metalc ? ? N IEL . OXT ? ? ? 1_555 B K . K ? ? A IEL 175 A K 200 1_555 ? ? ? ? ? ? ? 2.886 ? ? metalc10 metalc ? ? E NA . NA ? ? ? 1_555 O HOH . O ? ? A NA 203 A HOH 308 1_555 ? ? ? ? ? ? ? 2.259 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A CCC 174 N3 ? ? A GTP 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A CCC 174 O2 ? ? A GTP 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A CCC 174 N4 ? ? A GTP 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 173 O2 ? ? A G 2 A U 173 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 173 N3 ? ? A G 2 A U 173 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 172 N1 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 172 O6 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 172 N2 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 171 N1 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 171 O6 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 171 N2 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 170 N3 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 170 O2 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 170 N4 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 169 N3 ? ? A A 6 A U 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 169 O4 ? ? A A 6 A U 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 168 N1 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 168 O6 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 168 N2 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 167 N3 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 167 O2 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 167 N4 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 166 N3 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 166 O2 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 166 N4 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N1 ? ? ? 1_555 A G 165 N1 ? ? A A 10 A G 165 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog27 hydrog ? ? A A 10 N6 ? ? ? 1_555 A G 165 O6 ? ? A A 10 A G 165 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog28 hydrog ? ? A G 11 N7 ? ? ? 1_555 A G 163 N1 ? ? A G 11 A G 163 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 A G 163 N2 ? ? A G 11 A G 163 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog30 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 79 N3 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 79 O2 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 79 N4 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 78 N3 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 78 O2 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 78 N4 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 14 N2 ? ? ? 1_555 A A 81 N3 ? ? A G 14 A A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog37 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 77 N1 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 77 O6 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 77 N2 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 76 N3 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 76 O2 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 76 N4 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 17 N3 ? ? ? 1_555 A G 75 N1 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 17 N4 ? ? ? 1_555 A G 75 O6 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 17 O2 ? ? ? 1_555 A G 75 N2 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 74 N1 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 74 O6 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 74 N2 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 19 N3 ? ? ? 1_555 A G 73 N1 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 19 N4 ? ? ? 1_555 A G 73 O6 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 19 O2 ? ? ? 1_555 A G 73 N2 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 20 N2 ? ? ? 1_555 A A 72 N7 ? ? A G 20 A A 72 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog53 hydrog ? ? A G 20 N3 ? ? ? 1_555 A A 72 N6 ? ? A G 20 A A 72 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog54 hydrog ? ? A A 21 N6 ? ? ? 1_555 A G 71 N3 ? ? A A 21 A G 71 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog55 hydrog ? ? A A 21 N7 ? ? ? 1_555 A G 71 N2 ? ? A A 21 A G 71 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog56 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 70 N3 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 22 N2 ? ? ? 1_555 A C 70 O2 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 22 O6 ? ? ? 1_555 A C 70 N4 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A A 23 N1 ? ? ? 1_555 A G 69 N1 ? ? A A 23 A G 69 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog60 hydrog ? ? A A 23 N6 ? ? ? 1_555 A G 69 O6 ? ? A A 23 A G 69 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog61 hydrog ? ? A U 24 O2 ? ? ? 1_555 A G 69 N1 ? ? A U 24 A G 69 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog62 hydrog ? ? A G 25 N2 ? ? ? 1_555 A A 67 N7 ? ? A G 25 A A 67 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog63 hydrog ? ? A G 25 N3 ? ? ? 1_555 A A 67 N6 ? ? A G 25 A A 67 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog64 hydrog ? ? A A 26 N6 ? ? ? 1_555 A A 66 N7 ? ? A A 26 A A 66 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog65 hydrog ? ? A A 26 N7 ? ? ? 1_555 A A 66 N6 ? ? A A 26 A A 66 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog66 hydrog ? ? A G 27 N2 ? ? ? 1_555 A U 28 O4 ? ? A G 27 A U 28 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog67 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 65 N7 ? ? A U 28 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog68 hydrog ? ? A U 28 O2 ? ? ? 1_555 A A 65 N6 ? ? A U 28 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog69 hydrog ? ? A A 29 N6 ? ? ? 1_555 A G 64 N3 ? ? A A 29 A G 64 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog70 hydrog ? ? A A 29 N7 ? ? ? 1_555 A G 64 N2 ? ? A A 29 A G 64 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog71 hydrog ? ? A G 30 N1 ? ? ? 1_555 A U 63 O2 ? ? A G 30 A U 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? A G 30 O6 ? ? ? 1_555 A U 63 N3 ? ? A G 30 A U 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog73 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 62 N3 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 62 O2 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 62 N4 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 61 N1 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 61 O6 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A U 33 N3 ? ? ? 1_555 A G 60 O6 ? ? A U 33 A G 60 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog80 hydrog ? ? A U 33 O2 ? ? ? 1_555 A G 60 N1 ? ? A U 33 A G 60 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog81 hydrog ? ? A G 34 N1 ? ? ? 1_555 A C 59 N3 ? ? A G 34 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 34 N2 ? ? ? 1_555 A C 59 O2 ? ? A G 34 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 34 O6 ? ? ? 1_555 A C 59 N4 ? ? A G 34 A C 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 58 N1 ? ? A U 35 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A U 35 O4 ? ? ? 1_555 A A 58 N6 ? ? A U 35 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 36 O2 ? ? ? 1_555 A G 57 N2 ? ? A C 36 A G 57 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog87 hydrog ? ? A C 37 N3 ? ? ? 1_555 A G 56 N1 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A C 37 N4 ? ? ? 1_555 A G 56 O6 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 37 O2 ? ? ? 1_555 A G 56 N2 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 38 N3 ? ? ? 1_555 A G 55 N1 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 55 O6 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 38 O2 ? ? ? 1_555 A G 55 N2 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A A 39 N3 ? ? ? 1_555 A C 41 N4 ? ? A A 39 A C 41 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog94 hydrog ? ? A U 40 N3 ? ? ? 1_555 A U 52 O2 ? ? A U 40 A U 52 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog95 hydrog ? ? A U 40 O2 ? ? ? 1_555 A U 52 N3 ? ? A U 40 A U 52 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog96 hydrog ? ? A U 40 O2 ? ? ? 1_555 A G 54 N2 ? ? A U 40 A G 54 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog97 hydrog ? ? A C 41 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 41 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 41 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A A 42 N6 ? ? ? 1_555 A A 50 N1 ? ? A A 42 A A 50 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog101 hydrog ? ? A A 42 N7 ? ? ? 1_555 A A 50 N6 ? ? A A 42 A A 50 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog102 hydrog ? ? A G 44 N1 ? ? ? 1_555 A C 100 N3 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A G 44 N2 ? ? ? 1_555 A C 100 O2 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A G 44 O6 ? ? ? 1_555 A C 100 N4 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A G 45 N1 ? ? ? 1_555 A C 99 N3 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A G 45 N2 ? ? ? 1_555 A C 99 O2 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A G 45 O6 ? ? ? 1_555 A C 99 N4 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 46 N1 ? ? ? 1_555 A C 98 N3 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A G 46 N2 ? ? ? 1_555 A C 98 O2 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A G 46 O6 ? ? ? 1_555 A C 98 N4 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A A 47 N1 ? ? ? 1_555 A U 97 N3 ? ? A A 47 A U 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A A 47 N6 ? ? ? 1_555 A U 97 O4 ? ? A A 47 A U 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 96 N3 ? ? A G 48 A C 96 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog114 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 95 N3 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 95 O2 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 95 N4 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 68 N1 ? ? ? 1_555 A A 126 N7 ? ? A G 68 A A 126 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog118 hydrog ? ? A G 69 N2 ? ? ? 1_555 A A 127 N1 ? ? A G 69 A A 127 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog119 hydrog ? ? A G 69 N3 ? ? ? 1_555 A A 127 N6 ? ? A G 69 A A 127 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog120 hydrog ? ? A G 80 N2 ? ? ? 1_555 A A 81 N7 ? ? A G 80 A A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog121 hydrog ? ? A A 82 N1 ? ? ? 1_555 A U 113 N3 ? ? A A 82 A U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A A 82 N6 ? ? ? 1_555 A U 113 O4 ? ? A A 82 A U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A G 83 N1 ? ? ? 1_555 A C 112 N3 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A G 83 N2 ? ? ? 1_555 A C 112 O2 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A G 83 O6 ? ? ? 1_555 A C 112 N4 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A G 84 N1 ? ? ? 1_555 A C 111 N3 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A G 84 N2 ? ? ? 1_555 A C 111 O2 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A G 84 O6 ? ? ? 1_555 A C 111 N4 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A G 85 N1 ? ? ? 1_555 A U 109 O2 ? ? A G 85 A U 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog130 hydrog ? ? A G 85 O6 ? ? ? 1_555 A U 109 N3 ? ? A G 85 A U 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog131 hydrog ? ? A U 86 N3 ? ? ? 1_555 A A 108 N1 ? ? A U 86 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A U 86 O4 ? ? ? 1_555 A A 108 N6 ? ? A U 86 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A G 87 N1 ? ? ? 1_555 A C 107 N3 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A G 87 N2 ? ? ? 1_555 A C 107 O2 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A G 87 O6 ? ? ? 1_555 A C 107 N4 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A C 88 N3 ? ? ? 1_555 A G 106 N1 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A C 88 N4 ? ? ? 1_555 A G 106 O6 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A C 88 O2 ? ? ? 1_555 A G 106 N2 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A A 89 N1 ? ? ? 1_555 A U 105 N3 ? ? A A 89 A U 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A A 89 N6 ? ? ? 1_555 A U 105 O4 ? ? A A 89 A U 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A G 90 N1 ? ? ? 1_555 A C 104 N3 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A G 90 N2 ? ? ? 1_555 A C 104 O2 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A G 90 O6 ? ? ? 1_555 A C 104 N4 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A A 91 N1 ? ? ? 1_555 A U 103 N3 ? ? A A 91 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A A 91 N6 ? ? ? 1_555 A U 103 O4 ? ? A A 91 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A G 92 N1 ? ? ? 1_555 A C 102 N3 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 92 N2 ? ? ? 1_555 A C 102 O2 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A G 92 O6 ? ? ? 1_555 A C 102 N4 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A U 93 N3 ? ? ? 1_555 A G 101 O6 ? ? A U 93 A G 101 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog150 hydrog ? ? A U 93 O2 ? ? ? 1_555 A G 101 N1 ? ? A U 93 A G 101 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog151 hydrog ? ? A G 114 N1 ? ? ? 1_555 A U 140 O2 ? ? A G 114 A U 140 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog152 hydrog ? ? A G 114 O6 ? ? ? 1_555 A U 140 N3 ? ? A G 114 A U 140 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog153 hydrog ? ? A G 115 N1 ? ? ? 1_555 A C 139 N3 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? A G 115 N2 ? ? ? 1_555 A C 139 O2 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? A G 115 O6 ? ? ? 1_555 A C 139 N4 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog156 hydrog ? ? A G 116 N1 ? ? ? 1_555 A A 138 N1 ? ? A G 116 A A 138 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog157 hydrog ? ? A G 116 O6 ? ? ? 1_555 A A 138 N6 ? ? A G 116 A A 138 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog158 hydrog ? ? A G 117 N1 ? ? ? 1_555 A C 137 N3 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? A G 117 N2 ? ? ? 1_555 A C 137 O2 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? A G 117 O6 ? ? ? 1_555 A C 137 N4 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? A G 118 N1 ? ? ? 1_555 A C 136 N3 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? A G 118 N2 ? ? ? 1_555 A C 136 O2 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? A G 118 O6 ? ? ? 1_555 A C 136 N4 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A U 119 N3 ? ? ? 1_555 A A 135 N1 ? ? A U 119 A A 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? A U 119 O4 ? ? ? 1_555 A A 135 N6 ? ? A U 119 A A 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? A A 120 N1 ? ? ? 1_555 A U 134 N3 ? ? A A 120 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? A A 120 N6 ? ? ? 1_555 A U 134 O4 ? ? A A 120 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? A U 121 N3 ? ? ? 1_555 A A 133 N1 ? ? A U 121 A A 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? A U 121 O4 ? ? ? 1_555 A A 133 N6 ? ? A U 121 A A 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? A G 122 N1 ? ? ? 1_555 A C 132 N3 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? A G 122 N2 ? ? ? 1_555 A C 132 O2 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? A G 122 O6 ? ? ? 1_555 A C 132 N4 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? A G 123 N1 ? ? ? 1_555 A C 131 N3 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? A G 123 N2 ? ? ? 1_555 A C 131 O2 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? A G 123 O6 ? ? ? 1_555 A C 131 N4 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? A G 124 N1 ? ? ? 1_555 A C 130 N3 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? A G 124 N2 ? ? ? 1_555 A C 130 O2 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog178 hydrog ? ? A G 124 O6 ? ? ? 1_555 A C 130 N4 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog179 hydrog ? ? A G 125 N2 ? ? ? 1_555 A A 129 N7 ? ? A G 125 A A 129 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog180 hydrog ? ? A G 141 N1 ? ? ? 1_555 A A 162 N1 ? ? A G 141 A A 162 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog181 hydrog ? ? A G 141 O6 ? ? ? 1_555 A A 162 N6 ? ? A G 141 A A 162 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog182 hydrog ? ? A G 141 N2 ? ? ? 1_555 A G 163 O6 ? ? A G 141 A G 163 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog183 hydrog ? ? A U 142 N3 ? ? ? 1_555 A G 161 O6 ? ? A U 142 A G 161 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog184 hydrog ? ? A U 142 O2 ? ? ? 1_555 A G 161 N1 ? ? A U 142 A G 161 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog185 hydrog ? ? A C 143 N3 ? ? ? 1_555 A G 160 N1 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog186 hydrog ? ? A C 143 N4 ? ? ? 1_555 A G 160 O6 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? A C 143 O2 ? ? ? 1_555 A G 160 N2 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog188 hydrog ? ? A A 144 N1 ? ? ? 1_555 A U 159 N3 ? ? A A 144 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? A A 144 N6 ? ? ? 1_555 A U 159 O4 ? ? A A 144 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? A C 145 N3 ? ? ? 1_555 A G 158 N1 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog191 hydrog ? ? A C 145 N4 ? ? ? 1_555 A G 158 O6 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? A C 145 O2 ? ? ? 1_555 A G 158 N2 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog193 hydrog ? ? A G 146 N1 ? ? ? 1_555 A C 157 N3 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog194 hydrog ? ? A G 146 N2 ? ? ? 1_555 A C 157 O2 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog195 hydrog ? ? A G 146 O6 ? ? ? 1_555 A C 157 N4 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog196 hydrog ? ? A G 147 N1 ? ? ? 1_555 A C 156 N3 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog197 hydrog ? ? A G 147 N2 ? ? ? 1_555 A C 156 O2 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog198 hydrog ? ? A G 147 O6 ? ? ? 1_555 A C 156 N4 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog199 hydrog ? ? A A 148 N1 ? ? ? 1_555 A U 155 N3 ? ? A A 148 A U 155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog200 hydrog ? ? A A 148 N6 ? ? ? 1_555 A U 155 O4 ? ? A A 148 A U 155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog201 hydrog ? ? A G 149 N1 ? ? ? 1_555 A C 154 N3 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog202 hydrog ? ? A G 149 N2 ? ? ? 1_555 A C 154 O2 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog203 hydrog ? ? A G 149 O6 ? ? ? 1_555 A C 154 N4 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_site.id AC2 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NA _struct_site.pdbx_auth_seq_id 203 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 1 _struct_site.details 'BINDING SITE FOR RESIDUE NA A 203' # _struct_site_gen.id 1 _struct_site_gen.site_id AC2 _struct_site_gen.pdbx_num_res 1 _struct_site_gen.label_comp_id HOH _struct_site_gen.label_asym_id O _struct_site_gen.label_seq_id . _struct_site_gen.pdbx_auth_ins_code ? _struct_site_gen.auth_comp_id HOH _struct_site_gen.auth_asym_id A _struct_site_gen.auth_seq_id 308 _struct_site_gen.label_atom_id . _struct_site_gen.label_alt_id ? _struct_site_gen.symmetry 1_555 _struct_site_gen.details ? # _database_PDB_matrix.entry_id 3DIR _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DIR _atom_sites.fract_transf_matrix[1][1] 0.018247 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012684 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006977 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N NA O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 1 1 GTP GTP A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 C 4 4 4 C C A . n A 1 5 G 5 5 5 G G A . n A 1 6 A 6 6 6 A A A . n A 1 7 C 7 7 7 C C A . n A 1 8 G 8 8 8 G G A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n A 1 16 G 16 16 16 G G A . n A 1 17 C 17 17 17 C C A . n A 1 18 C 18 18 18 C C A . n A 1 19 C 19 19 19 C C A . n A 1 20 G 20 20 20 G G A . n A 1 21 A 21 21 21 A A A . n A 1 22 G 22 22 22 G G A . n A 1 23 A 23 23 23 A A A . n A 1 24 U 24 24 24 U U A . n A 1 25 G 25 25 25 G G A . n A 1 26 A 26 26 26 A A A . n A 1 27 G 27 27 27 G G A . n A 1 28 U 28 28 28 U U A . n A 1 29 A 29 29 29 A A A . n A 1 30 G 30 30 30 G G A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 U 33 33 33 U U A . n A 1 34 G 34 34 34 G G A . n A 1 35 U 35 35 35 U U A . n A 1 36 C 36 36 36 C C A . n A 1 37 C 37 37 37 C C A . n A 1 38 C 38 38 38 C C A . n A 1 39 A 39 39 39 A A A . n A 1 40 U 40 40 40 U U A . n A 1 41 C 41 41 41 C C A . n A 1 42 A 42 42 42 A A A . n A 1 43 G 43 43 43 G G A . n A 1 44 G 44 44 44 G G A . n A 1 45 G 45 45 45 G G A . n A 1 46 G 46 46 46 G G A . n A 1 47 A 47 47 47 A A A . n A 1 48 G 48 48 48 G G A . n A 1 49 G 49 49 49 G G A . n A 1 50 A 50 50 50 A A A . n A 1 51 A 51 51 51 A A A . n A 1 52 U 52 52 52 U U A . n A 1 53 C 53 53 53 C C A . n A 1 54 G 54 54 54 G G A . n A 1 55 G 55 55 55 G G A . n A 1 56 G 56 56 56 G G A . n A 1 57 G 57 57 57 G G A . n A 1 58 A 58 58 58 A A A . n A 1 59 C 59 59 59 C C A . n A 1 60 G 60 60 60 G G A . n A 1 61 G 61 61 61 G G A . n A 1 62 C 62 62 62 C C A . n A 1 63 U 63 63 63 U U A . n A 1 64 G 64 64 64 G G A . n A 1 65 A 65 65 65 A A A . n A 1 66 A 66 66 66 A A A . n A 1 67 A 67 67 67 A A A . n A 1 68 G 68 68 68 G G A . n A 1 69 G 69 69 69 G G A . n A 1 70 C 70 70 70 C C A . n A 1 71 G 71 71 71 G G A . n A 1 72 A 72 72 72 A A A . n A 1 73 G 73 73 73 G G A . n A 1 74 G 74 74 74 G G A . n A 1 75 G 75 75 75 G G A . n A 1 76 C 76 76 76 C C A . n A 1 77 G 77 77 77 G G A . n A 1 78 C 78 78 78 C C A . n A 1 79 C 79 79 79 C C A . n A 1 80 G 80 80 80 G G A . n A 1 81 A 81 81 81 A A A . n A 1 82 A 82 82 82 A A A . n A 1 83 G 83 83 83 G G A . n A 1 84 G 84 84 84 G G A . n A 1 85 G 85 85 85 G G A . n A 1 86 U 86 86 86 U U A . n A 1 87 G 87 87 87 G G A . n A 1 88 C 88 88 88 C C A . n A 1 89 A 89 89 89 A A A . n A 1 90 G 90 90 90 G G A . n A 1 91 A 91 91 91 A A A . n A 1 92 G 92 92 92 G G A . n A 1 93 U 93 93 93 U U A . n A 1 94 U 94 94 94 U U A . n A 1 95 C 95 95 95 C C A . n A 1 96 C 96 96 96 C C A . n A 1 97 U 97 97 97 U U A . n A 1 98 C 98 98 98 C C A . n A 1 99 C 99 99 99 C C A . n A 1 100 C 100 100 100 C C A . n A 1 101 G 101 101 101 G G A . n A 1 102 C 102 102 102 C C A . n A 1 103 U 103 103 103 U U A . n A 1 104 C 104 104 104 C C A . n A 1 105 U 105 105 105 U U A . n A 1 106 G 106 106 106 G G A . n A 1 107 C 107 107 107 C C A . n A 1 108 A 108 108 108 A A A . n A 1 109 U 109 109 109 U U A . n A 1 110 G 110 110 110 G G A . n A 1 111 C 111 111 111 C C A . n A 1 112 C 112 112 112 C C A . n A 1 113 U 113 113 113 U U A . n A 1 114 G 114 114 114 G G A . n A 1 115 G 115 115 115 G G A . n A 1 116 G 116 116 116 G G A . n A 1 117 G 117 117 117 G G A . n A 1 118 G 118 118 118 G G A . n A 1 119 U 119 119 119 U U A . n A 1 120 A 120 120 120 A A A . n A 1 121 U 121 121 121 U U A . n A 1 122 G 122 122 122 G G A . n A 1 123 G 123 123 123 G G A . n A 1 124 G 124 124 124 G G A . n A 1 125 G 125 125 125 G G A . n A 1 126 A 126 126 126 A A A . n A 1 127 A 127 127 127 A A A . n A 1 128 U 128 128 128 U U A . n A 1 129 A 129 129 129 A A A . n A 1 130 C 130 130 130 C C A . n A 1 131 C 131 131 131 C C A . n A 1 132 C 132 132 132 C C A . n A 1 133 A 133 133 133 A A A . n A 1 134 U 134 134 134 U U A . n A 1 135 A 135 135 135 A A A . n A 1 136 C 136 136 136 C C A . n A 1 137 C 137 137 137 C C A . n A 1 138 A 138 138 138 A A A . n A 1 139 C 139 139 139 C C A . n A 1 140 U 140 140 140 U U A . n A 1 141 G 141 141 141 G G A . n A 1 142 U 142 142 142 U U A . n A 1 143 C 143 143 143 C C A . n A 1 144 A 144 144 144 A A A . n A 1 145 C 145 145 145 C C A . n A 1 146 G 146 146 146 G G A . n A 1 147 G 147 147 147 G G A . n A 1 148 A 148 148 148 A A A . n A 1 149 G 149 149 149 G G A . n A 1 150 G 150 150 150 G G A . n A 1 151 U 151 151 151 U U A . n A 1 152 C 152 152 152 C C A . n A 1 153 U 153 153 153 U U A . n A 1 154 C 154 154 154 C C A . n A 1 155 U 155 155 155 U U A . n A 1 156 C 156 156 156 C C A . n A 1 157 C 157 157 157 C C A . n A 1 158 G 158 158 158 G G A . n A 1 159 U 159 159 159 U U A . n A 1 160 G 160 160 160 G G A . n A 1 161 G 161 161 161 G G A . n A 1 162 A 162 162 162 A A A . n A 1 163 G 163 163 163 G G A . n A 1 164 A 164 164 164 A A A . n A 1 165 G 165 165 165 G G A . n A 1 166 C 166 166 166 C C A . n A 1 167 C 167 167 167 C C A . n A 1 168 G 168 168 168 G G A . n A 1 169 U 169 169 169 U U A . n A 1 170 C 170 170 170 C C A . n A 1 171 G 171 171 171 G G A . n A 1 172 G 172 172 172 G G A . n A 1 173 U 173 173 173 U U A . n A 1 174 CCC 174 174 174 CCC CCC A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 200 200 K K A . C 3 NA 1 201 201 NA NA A . D 3 NA 1 202 202 NA NA A . E 3 NA 1 203 203 NA NA A . F 3 NA 1 204 204 NA NA A . G 3 NA 1 205 205 NA NA A . H 3 NA 1 206 206 NA NA A . I 3 NA 1 207 207 NA NA A . J 3 NA 1 208 208 NA NA A . K 3 NA 1 209 209 NA NA A . L 3 NA 1 210 210 NA NA A . M 3 NA 1 211 211 NA NA A . N 4 IEL 1 175 175 IEL IEL A . O 5 HOH 1 300 300 HOH HOH A . O 5 HOH 2 301 301 HOH HOH A . O 5 HOH 3 302 302 HOH HOH A . O 5 HOH 4 303 303 HOH HOH A . O 5 HOH 5 304 304 HOH HOH A . O 5 HOH 6 305 305 HOH HOH A . O 5 HOH 7 306 306 HOH HOH A . O 5 HOH 8 307 307 HOH HOH A . O 5 HOH 9 308 308 HOH HOH A . O 5 HOH 10 309 309 HOH HOH A . O 5 HOH 11 310 310 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GTP 1 A GTP 1 ? G "GUANOSINE-5'-TRIPHOSPHATE" 2 A CCC 174 A CCC 174 ? C ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A G 11 ? A G 11 ? 1_555 NA ? G NA . ? A NA 205 ? 1_555 OP2 ? A G 11 ? A G 11 ? 1_555 57.2 ? 2 OP1 ? A G 11 ? A G 11 ? 1_555 NA ? G NA . ? A NA 205 ? 1_555 O6 ? A G 12 ? A G 12 ? 1_555 113.5 ? 3 OP2 ? A G 11 ? A G 11 ? 1_555 NA ? G NA . ? A NA 205 ? 1_555 O6 ? A G 12 ? A G 12 ? 1_555 86.8 ? 4 O6 ? A G 20 ? A G 20 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O6 ? A G 71 ? A G 71 ? 1_555 66.6 ? 5 O6 ? A G 20 ? A G 20 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O ? O HOH . ? A HOH 308 ? 1_555 71.0 ? 6 O6 ? A G 71 ? A G 71 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O ? O HOH . ? A HOH 308 ? 1_555 57.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2020-10-21 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' reflns_shell 2 3 'Structure model' struct_conn 3 3 'Structure model' struct_site 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_reflns_shell.Rmerge_I_obs' 2 3 'Structure model' '_reflns_shell.number_unique_obs' 3 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 5 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 6 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 7 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 8 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 14 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 17 4 'Structure model' '_database_2.pdbx_DOI' 18 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 29.9710 -1.9400 19.0920 -0.0985 -0.1111 -0.1635 0.0630 -0.0852 0.0569 4.0228 7.4858 3.9367 2.6166 0.3586 -0.2921 0.1809 0.3891 -0.0901 -0.6788 0.1452 -0.0017 0.6675 -0.1759 -0.3261 'X-RAY DIFFRACTION' 2 ? refined 7.4670 47.2070 21.3810 0.0533 0.0852 0.2408 0.1751 -0.0424 0.1176 1.5086 0.6686 1.5506 -0.0398 0.6617 0.5106 -0.2008 0.2212 0.7337 -0.1866 -0.0914 -0.0394 -0.6041 -0.4139 0.2922 'X-RAY DIFFRACTION' 3 ? refined 9.0710 27.1510 11.3390 -0.0197 -0.0499 0.0976 0.1810 -0.1764 -0.0108 4.4128 0.4720 2.6018 -1.1184 1.9801 -1.0703 0.0673 0.4360 -0.0513 -0.0836 -0.1890 0.3312 -0.3501 -0.0670 0.1217 'X-RAY DIFFRACTION' 4 ? refined 30.2040 33.6440 15.5190 -0.0230 -0.0514 0.0508 0.0757 -0.0563 0.0942 6.9520 5.5347 1.0581 -5.1300 0.7134 -0.0561 0.3926 0.3998 0.8504 -0.5336 -0.2969 -0.6082 -0.4967 0.0328 -0.0958 'X-RAY DIFFRACTION' 5 ? refined 51.0780 8.5500 16.0520 -0.0709 0.0362 0.1834 0.1724 -0.0828 0.0718 12.3002 2.4438 1.3254 3.1476 -2.2739 0.6358 -0.2640 -0.3562 -0.8673 0.3639 -0.0779 -0.5720 0.4520 0.2165 0.3419 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 1 A 11 A 11 ? 'X-RAY DIFFRACTION' ? 2 1 A 163 A 163 A 174 A 174 ? 'X-RAY DIFFRACTION' ? 3 2 A 12 A 12 A 79 A 79 ? 'X-RAY DIFFRACTION' ? 4 3 A 80 A 80 A 113 A 113 ? 'X-RAY DIFFRACTION' ? 5 4 A 114 A 114 A 140 A 140 ? 'X-RAY DIFFRACTION' ? 6 5 A 141 A 141 A 162 A 162 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 CBASS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 REFMAC phasing . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N1 A C 95 ? ? C2 A C 95 ? ? 1.508 1.397 0.111 0.010 N 2 1 N1 A C 95 ? ? C6 A C 95 ? ? 1.438 1.367 0.071 0.006 N 3 1 C4 A C 95 ? ? C5 A C 95 ? ? 1.564 1.425 0.139 0.008 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 113.75 108.50 5.25 0.70 N 2 1 "O4'" A G 27 ? ? "C1'" A G 27 ? ? N9 A G 27 ? ? 113.84 108.50 5.34 0.70 N 3 1 "C3'" A U 52 ? ? "O3'" A U 52 ? ? P A C 53 ? ? 128.57 119.70 8.87 1.20 Y 4 1 C6 A C 95 ? ? N1 A C 95 ? ? C2 A C 95 ? ? 123.47 120.30 3.17 0.40 N 5 1 N3 A C 95 ? ? C4 A C 95 ? ? C5 A C 95 ? ? 125.10 121.90 3.20 0.40 N 6 1 "O4'" A U 97 ? ? "C1'" A U 97 ? ? N1 A U 97 ? ? 112.85 108.50 4.35 0.70 N 7 1 "C1'" A U 153 ? ? "O4'" A U 153 ? ? "C4'" A U 153 ? ? 104.24 109.70 -5.46 0.70 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CCC PC P N S 73 CCC O1C O N N 74 CCC O2C O N N 75 CCC P P N N 76 CCC OP1 O N N 77 CCC OP2 O N N 78 CCC OP3 O N N 79 CCC "O5'" O N N 80 CCC "C5'" C N N 81 CCC "C4'" C N R 82 CCC "O4'" O N N 83 CCC "C3'" C N R 84 CCC "O3'" O N N 85 CCC "C2'" C N R 86 CCC "O2'" O N N 87 CCC "C1'" C N R 88 CCC N1 N N N 89 CCC C2 C N N 90 CCC O2 O N N 91 CCC N3 N N N 92 CCC C4 C N N 93 CCC N4 N N N 94 CCC C5 C N N 95 CCC C6 C N N 96 CCC HOC2 H N N 97 CCC HOP2 H N N 98 CCC HOP3 H N N 99 CCC "H5'" H N N 100 CCC "H5''" H N N 101 CCC "H4'" H N N 102 CCC "H3'" H N N 103 CCC "H2'" H N N 104 CCC "H1'" H N N 105 CCC H41 H N N 106 CCC H42 H N N 107 CCC H5 H N N 108 CCC H6 H N N 109 G OP3 O N N 110 G P P N N 111 G OP1 O N N 112 G OP2 O N N 113 G "O5'" O N N 114 G "C5'" C N N 115 G "C4'" C N R 116 G "O4'" O N N 117 G "C3'" C N S 118 G "O3'" O N N 119 G "C2'" C N R 120 G "O2'" O N N 121 G "C1'" C N R 122 G N9 N Y N 123 G C8 C Y N 124 G N7 N Y N 125 G C5 C Y N 126 G C6 C N N 127 G O6 O N N 128 G N1 N N N 129 G C2 C N N 130 G N2 N N N 131 G N3 N N N 132 G C4 C Y N 133 G HOP3 H N N 134 G HOP2 H N N 135 G "H5'" H N N 136 G "H5''" H N N 137 G "H4'" H N N 138 G "H3'" H N N 139 G "HO3'" H N N 140 G "H2'" H N N 141 G "HO2'" H N N 142 G "H1'" H N N 143 G H8 H N N 144 G H1 H N N 145 G H21 H N N 146 G H22 H N N 147 GTP PG P N N 148 GTP O1G O N N 149 GTP O2G O N N 150 GTP O3G O N N 151 GTP O3B O N N 152 GTP PB P N N 153 GTP O1B O N N 154 GTP O2B O N N 155 GTP O3A O N N 156 GTP PA P N N 157 GTP O1A O N N 158 GTP O2A O N N 159 GTP "O5'" O N N 160 GTP "C5'" C N N 161 GTP "C4'" C N R 162 GTP "O4'" O N N 163 GTP "C3'" C N S 164 GTP "O3'" O N N 165 GTP "C2'" C N R 166 GTP "O2'" O N N 167 GTP "C1'" C N R 168 GTP N9 N Y N 169 GTP C8 C Y N 170 GTP N7 N Y N 171 GTP C5 C Y N 172 GTP C6 C N N 173 GTP O6 O N N 174 GTP N1 N N N 175 GTP C2 C N N 176 GTP N2 N N N 177 GTP N3 N N N 178 GTP C4 C Y N 179 GTP HOG2 H N N 180 GTP HOG3 H N N 181 GTP HOB2 H N N 182 GTP HOA2 H N N 183 GTP "H5'" H N N 184 GTP "H5''" H N N 185 GTP "H4'" H N N 186 GTP "H3'" H N N 187 GTP "HO3'" H N N 188 GTP "H2'" H N N 189 GTP "HO2'" H N N 190 GTP "H1'" H N N 191 GTP H8 H N N 192 GTP HN1 H N N 193 GTP HN21 H N N 194 GTP HN22 H N N 195 HOH O O N N 196 HOH H1 H N N 197 HOH H2 H N N 198 IEL O O N N 199 IEL C C N N 200 IEL OXT O N N 201 IEL CA C N S 202 IEL N N N N 203 IEL CB C N N 204 IEL "CG'" C N N 205 IEL CG C N N 206 IEL CD C N N 207 IEL NE N N N 208 IEL CZ C N N 209 IEL NH1 N N N 210 IEL CH2 C N N 211 IEL HOXT H N N 212 IEL HA H N N 213 IEL HN H N N 214 IEL HNA H N N 215 IEL HB H N N 216 IEL HBA H N N 217 IEL "HG'" H N N 218 IEL "HG'A" H N N 219 IEL HG H N N 220 IEL HGA H N N 221 IEL HD H N N 222 IEL HDA H N N 223 IEL HNE H N N 224 IEL HNH1 H N N 225 IEL HH2 H N N 226 IEL HH2A H N N 227 IEL HH2B H N N 228 K K K N N 229 NA NA NA N N 230 U OP3 O N N 231 U P P N N 232 U OP1 O N N 233 U OP2 O N N 234 U "O5'" O N N 235 U "C5'" C N N 236 U "C4'" C N R 237 U "O4'" O N N 238 U "C3'" C N S 239 U "O3'" O N N 240 U "C2'" C N R 241 U "O2'" O N N 242 U "C1'" C N R 243 U N1 N N N 244 U C2 C N N 245 U O2 O N N 246 U N3 N N N 247 U C4 C N N 248 U O4 O N N 249 U C5 C N N 250 U C6 C N N 251 U HOP3 H N N 252 U HOP2 H N N 253 U "H5'" H N N 254 U "H5''" H N N 255 U "H4'" H N N 256 U "H3'" H N N 257 U "HO3'" H N N 258 U "H2'" H N N 259 U "HO2'" H N N 260 U "H1'" H N N 261 U H3 H N N 262 U H5 H N N 263 U H6 H N N 264 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CCC PC O1C doub N N 76 CCC PC O2C sing N N 77 CCC PC "O3'" sing N N 78 CCC PC "O2'" sing N N 79 CCC O2C HOC2 sing N N 80 CCC P OP1 doub N N 81 CCC P OP2 sing N N 82 CCC P OP3 sing N N 83 CCC P "O5'" sing N N 84 CCC OP2 HOP2 sing N N 85 CCC OP3 HOP3 sing N N 86 CCC "O5'" "C5'" sing N N 87 CCC "C5'" "C4'" sing N N 88 CCC "C5'" "H5'" sing N N 89 CCC "C5'" "H5''" sing N N 90 CCC "C4'" "O4'" sing N N 91 CCC "C4'" "C3'" sing N N 92 CCC "C4'" "H4'" sing N N 93 CCC "O4'" "C1'" sing N N 94 CCC "C3'" "O3'" sing N N 95 CCC "C3'" "C2'" sing N N 96 CCC "C3'" "H3'" sing N N 97 CCC "C2'" "O2'" sing N N 98 CCC "C2'" "C1'" sing N N 99 CCC "C2'" "H2'" sing N N 100 CCC "C1'" N1 sing N N 101 CCC "C1'" "H1'" sing N N 102 CCC N1 C2 sing N N 103 CCC N1 C6 sing N N 104 CCC C2 O2 doub N N 105 CCC C2 N3 sing N N 106 CCC N3 C4 doub N N 107 CCC C4 N4 sing N N 108 CCC C4 C5 sing N N 109 CCC N4 H41 sing N N 110 CCC N4 H42 sing N N 111 CCC C5 C6 doub N N 112 CCC C5 H5 sing N N 113 CCC C6 H6 sing N N 114 G OP3 P sing N N 115 G OP3 HOP3 sing N N 116 G P OP1 doub N N 117 G P OP2 sing N N 118 G P "O5'" sing N N 119 G OP2 HOP2 sing N N 120 G "O5'" "C5'" sing N N 121 G "C5'" "C4'" sing N N 122 G "C5'" "H5'" sing N N 123 G "C5'" "H5''" sing N N 124 G "C4'" "O4'" sing N N 125 G "C4'" "C3'" sing N N 126 G "C4'" "H4'" sing N N 127 G "O4'" "C1'" sing N N 128 G "C3'" "O3'" sing N N 129 G "C3'" "C2'" sing N N 130 G "C3'" "H3'" sing N N 131 G "O3'" "HO3'" sing N N 132 G "C2'" "O2'" sing N N 133 G "C2'" "C1'" sing N N 134 G "C2'" "H2'" sing N N 135 G "O2'" "HO2'" sing N N 136 G "C1'" N9 sing N N 137 G "C1'" "H1'" sing N N 138 G N9 C8 sing Y N 139 G N9 C4 sing Y N 140 G C8 N7 doub Y N 141 G C8 H8 sing N N 142 G N7 C5 sing Y N 143 G C5 C6 sing N N 144 G C5 C4 doub Y N 145 G C6 O6 doub N N 146 G C6 N1 sing N N 147 G N1 C2 sing N N 148 G N1 H1 sing N N 149 G C2 N2 sing N N 150 G C2 N3 doub N N 151 G N2 H21 sing N N 152 G N2 H22 sing N N 153 G N3 C4 sing N N 154 GTP PG O1G doub N N 155 GTP PG O2G sing N N 156 GTP PG O3G sing N N 157 GTP PG O3B sing N N 158 GTP O2G HOG2 sing N N 159 GTP O3G HOG3 sing N N 160 GTP O3B PB sing N N 161 GTP PB O1B doub N N 162 GTP PB O2B sing N N 163 GTP PB O3A sing N N 164 GTP O2B HOB2 sing N N 165 GTP O3A PA sing N N 166 GTP PA O1A doub N N 167 GTP PA O2A sing N N 168 GTP PA "O5'" sing N N 169 GTP O2A HOA2 sing N N 170 GTP "O5'" "C5'" sing N N 171 GTP "C5'" "C4'" sing N N 172 GTP "C5'" "H5'" sing N N 173 GTP "C5'" "H5''" sing N N 174 GTP "C4'" "O4'" sing N N 175 GTP "C4'" "C3'" sing N N 176 GTP "C4'" "H4'" sing N N 177 GTP "O4'" "C1'" sing N N 178 GTP "C3'" "O3'" sing N N 179 GTP "C3'" "C2'" sing N N 180 GTP "C3'" "H3'" sing N N 181 GTP "O3'" "HO3'" sing N N 182 GTP "C2'" "O2'" sing N N 183 GTP "C2'" "C1'" sing N N 184 GTP "C2'" "H2'" sing N N 185 GTP "O2'" "HO2'" sing N N 186 GTP "C1'" N9 sing N N 187 GTP "C1'" "H1'" sing N N 188 GTP N9 C8 sing Y N 189 GTP N9 C4 sing Y N 190 GTP C8 N7 doub Y N 191 GTP C8 H8 sing N N 192 GTP N7 C5 sing Y N 193 GTP C5 C6 sing N N 194 GTP C5 C4 doub Y N 195 GTP C6 O6 doub N N 196 GTP C6 N1 sing N N 197 GTP N1 C2 sing N N 198 GTP N1 HN1 sing N N 199 GTP C2 N2 sing N N 200 GTP C2 N3 doub N N 201 GTP N2 HN21 sing N N 202 GTP N2 HN22 sing N N 203 GTP N3 C4 sing N N 204 HOH O H1 sing N N 205 HOH O H2 sing N N 206 IEL O C doub N N 207 IEL CA C sing N N 208 IEL C OXT sing N N 209 IEL OXT HOXT sing N N 210 IEL N CA sing N N 211 IEL CA CB sing N N 212 IEL CA HA sing N N 213 IEL N HN sing N N 214 IEL N HNA sing N N 215 IEL "CG'" CB sing N N 216 IEL CB HB sing N N 217 IEL CB HBA sing N N 218 IEL "CG'" CG sing N N 219 IEL "CG'" "HG'" sing N N 220 IEL "CG'" "HG'A" sing N N 221 IEL CD CG sing N N 222 IEL CG HG sing N N 223 IEL CG HGA sing N N 224 IEL NE CD sing N N 225 IEL CD HD sing N N 226 IEL CD HDA sing N N 227 IEL CZ NE sing N N 228 IEL NE HNE sing N N 229 IEL CH2 CZ sing N N 230 IEL NH1 CZ doub N N 231 IEL NH1 HNH1 sing N N 232 IEL CH2 HH2 sing N N 233 IEL CH2 HH2A sing N N 234 IEL CH2 HH2B sing N N 235 U OP3 P sing N N 236 U OP3 HOP3 sing N N 237 U P OP1 doub N N 238 U P OP2 sing N N 239 U P "O5'" sing N N 240 U OP2 HOP2 sing N N 241 U "O5'" "C5'" sing N N 242 U "C5'" "C4'" sing N N 243 U "C5'" "H5'" sing N N 244 U "C5'" "H5''" sing N N 245 U "C4'" "O4'" sing N N 246 U "C4'" "C3'" sing N N 247 U "C4'" "H4'" sing N N 248 U "O4'" "C1'" sing N N 249 U "C3'" "O3'" sing N N 250 U "C3'" "C2'" sing N N 251 U "C3'" "H3'" sing N N 252 U "O3'" "HO3'" sing N N 253 U "C2'" "O2'" sing N N 254 U "C2'" "C1'" sing N N 255 U "C2'" "H2'" sing N N 256 U "O2'" "HO2'" sing N N 257 U "C1'" N1 sing N N 258 U "C1'" "H1'" sing N N 259 U N1 C2 sing N N 260 U N1 C6 sing N N 261 U C2 O2 doub N N 262 U C2 N3 sing N N 263 U N3 C4 sing N N 264 U N3 H3 sing N N 265 U C4 O4 doub N N 266 U C4 C5 sing N N 267 U C5 C6 doub N N 268 U C5 H5 sing N N 269 U C6 H6 sing N N 270 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3DIR 'double helix' 3DIR 'a-form double helix' 3DIR 'hairpin loop' 3DIR 'bulge loop' 3DIR 'mismatched base pair' 3DIR 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A CCC 174 1_555 -0.408 -0.338 -0.135 4.663 -6.232 -7.885 1 A_GTP1:CCC174_A A 1 ? A 174 ? 19 1 1 A G 2 1_555 A U 173 1_555 -2.495 -0.623 0.343 7.865 -16.232 -3.246 2 A_G2:U173_A A 2 ? A 173 ? 28 ? 1 A C 3 1_555 A G 172 1_555 -0.559 -0.153 0.128 9.869 -17.246 -1.875 3 A_C3:G172_A A 3 ? A 172 ? 19 1 1 A C 4 1_555 A G 171 1_555 0.298 -0.247 0.270 0.473 -9.729 -3.868 4 A_C4:G171_A A 4 ? A 171 ? 19 1 1 A G 5 1_555 A C 170 1_555 -0.021 -0.323 0.409 4.397 -7.856 -0.866 5 A_G5:C170_A A 5 ? A 170 ? 19 1 1 A A 6 1_555 A U 169 1_555 -0.233 -0.157 -0.103 4.726 -15.695 -2.554 6 A_A6:U169_A A 6 ? A 169 ? 20 1 1 A C 7 1_555 A G 168 1_555 0.046 -0.291 -0.131 7.639 -19.814 3.001 7 A_C7:G168_A A 7 ? A 168 ? 19 1 1 A G 8 1_555 A C 167 1_555 0.099 -0.257 0.091 -7.670 -12.434 -1.836 8 A_G8:C167_A A 8 ? A 167 ? 19 1 1 A G 9 1_555 A C 166 1_555 0.128 -0.180 0.128 -16.559 -20.091 0.116 9 A_G9:C166_A A 9 ? A 166 ? 19 1 1 A A 10 1_555 A G 165 1_555 -0.329 1.304 0.134 -16.612 -9.712 -21.605 10 A_A10:G165_A A 10 ? A 165 ? 8 1 1 A G 11 1_555 A G 163 1_555 -5.222 -0.031 -0.210 -8.437 0.887 -111.807 11 A_G11:G163_A A 11 ? A 163 ? 7 ? 1 A G 12 1_555 A C 79 1_555 -0.150 -0.265 -0.184 10.169 23.660 -9.059 12 A_G12:C79_A A 12 ? A 79 ? 19 1 1 A G 14 1_555 A C 78 1_555 -0.232 -0.133 0.146 -1.540 -4.394 6.298 13 A_G14:C78_A A 14 ? A 78 ? 19 1 1 A C 15 1_555 A G 77 1_555 0.457 -0.339 0.059 2.599 -8.350 0.173 14 A_C15:G77_A A 15 ? A 77 ? 19 1 1 A G 16 1_555 A C 76 1_555 0.052 -0.170 0.247 3.691 -10.846 -2.446 15 A_G16:C76_A A 16 ? A 76 ? 19 1 1 A C 17 1_555 A G 75 1_555 0.030 -0.342 0.147 3.743 -13.926 -3.142 16 A_C17:G75_A A 17 ? A 75 ? 19 1 1 A C 18 1_555 A G 74 1_555 0.238 -0.318 0.235 -4.499 -8.313 -2.783 17 A_C18:G74_A A 18 ? A 74 ? 19 1 1 A C 19 1_555 A G 73 1_555 -0.273 -0.234 -0.061 -1.268 -2.555 -5.582 18 A_C19:G73_A A 19 ? A 73 ? 19 1 1 A G 20 1_555 A A 72 1_555 6.640 -4.490 -0.241 -18.434 -19.517 -1.885 19 A_G20:A72_A A 20 ? A 72 ? 11 10 1 A A 21 1_555 A G 71 1_555 -6.760 -4.845 -0.070 -2.116 -9.729 -9.724 20 A_A21:G71_A A 21 ? A 71 ? 11 10 1 A G 22 1_555 A C 70 1_555 0.161 -0.091 -0.238 -3.673 -3.802 -1.612 21 A_G22:C70_A A 22 ? A 70 ? 19 1 1 A A 23 1_555 A G 69 1_555 -0.030 1.525 -0.751 -3.789 -6.615 -10.684 22 A_A23:G69_A A 23 ? A 69 ? 8 ? 1 A A 126 1_555 A G 68 1_555 -0.739 -4.590 0.944 -22.780 -38.148 77.027 23 A_A126:G68_A A 126 ? A 68 ? ? 3 1 A G 25 1_555 A A 67 1_555 6.812 -4.585 -0.070 -8.893 -17.857 -13.528 24 A_G25:A67_A A 25 ? A 67 ? 11 10 1 A A 26 1_555 A A 66 1_555 -6.008 5.337 -0.096 -15.675 1.330 -172.584 25 A_A26:A66_A A 26 ? A 66 ? 2 8 1 A U 28 1_555 A A 65 1_555 4.082 -2.133 -0.069 6.916 -12.972 -98.939 26 A_U28:A65_A A 28 ? A 65 ? 24 4 1 A A 29 1_555 A G 64 1_555 -7.166 -4.294 -0.453 2.139 -6.651 2.418 27 A_A29:G64_A A 29 ? A 64 ? 11 10 1 A G 30 1_555 A U 63 1_555 -2.194 -0.497 -0.397 3.934 -13.463 -8.019 28 A_G30:U63_A A 30 ? A 63 ? 28 ? 1 A G 31 1_555 A C 62 1_555 -1.001 -0.372 -0.605 2.002 -20.072 0.330 29 A_G31:C62_A A 31 ? A 62 ? 19 1 1 A C 32 1_555 A G 61 1_555 0.015 -0.038 -0.426 9.904 -21.940 1.758 30 A_C32:G61_A A 32 ? A 61 ? 19 1 1 A U 33 1_555 A G 60 1_555 2.768 -0.164 -0.269 6.482 -20.219 5.155 31 A_U33:G60_A A 33 ? A 60 ? 28 ? 1 A G 34 1_555 A C 59 1_555 0.309 0.332 -0.156 -3.884 -2.051 6.302 32 A_G34:C59_A A 34 ? A 59 ? 19 1 1 A U 35 1_555 A A 58 1_555 0.040 -0.051 -0.848 7.332 -9.974 -9.235 33 A_U35:A58_A A 35 ? A 58 ? 20 1 1 A C 36 1_555 A G 57 1_555 -1.005 0.224 0.137 7.352 -6.802 8.215 34 A_C36:G57_A A 36 ? A 57 ? ? 1 1 A C 37 1_555 A G 56 1_555 -0.344 0.073 -0.227 2.432 -6.543 4.046 35 A_C37:G56_A A 37 ? A 56 ? 19 1 1 A C 38 1_555 A G 55 1_555 -0.634 -0.216 -0.570 4.236 5.527 -2.734 36 A_C38:G55_A A 38 ? A 55 ? 19 1 1 A C 41 1_555 A G 54 1_555 -0.475 -0.075 0.069 -11.470 5.757 -2.662 37 A_C41:G54_A A 41 ? A 54 ? 19 1 1 A U 52 1_555 A U 40 1_555 2.160 2.824 0.967 29.139 33.332 177.267 38 A_U52:U40_A A 52 ? A 40 ? 13 2 1 A A 42 1_555 A A 50 1_555 -4.164 1.048 -0.085 29.165 2.932 -106.518 39 A_A42:A50_A A 42 ? A 50 ? 5 4 1 A C 95 1_555 A G 49 1_555 -0.052 -0.011 -0.306 17.400 -22.201 -5.462 40 A_C95:G49_A A 95 ? A 49 ? 19 1 1 A C 96 1_555 A G 48 1_555 -0.697 0.351 -0.113 7.498 -7.247 8.426 41 A_C96:G48_A A 96 ? A 48 ? ? 1 1 A U 97 1_555 A A 47 1_555 0.046 0.133 -0.073 13.174 -1.664 5.655 42 A_U97:A47_A A 97 ? A 47 ? 20 1 1 A C 98 1_555 A G 46 1_555 0.418 -0.397 -0.333 4.045 2.509 -3.689 43 A_C98:G46_A A 98 ? A 46 ? 19 1 1 A C 99 1_555 A G 45 1_555 0.354 -0.412 -0.457 9.673 -3.906 -4.762 44 A_C99:G45_A A 99 ? A 45 ? 19 1 1 A C 100 1_555 A G 44 1_555 1.282 -0.098 -0.048 -2.958 -6.334 6.666 45 A_C100:G44_A A 100 ? A 44 ? 19 1 1 A G 101 1_555 A U 93 1_555 -2.851 -0.329 -0.221 0.330 -9.886 4.079 46 A_G101:U93_A A 101 ? A 93 ? 28 ? 1 A C 102 1_555 A G 92 1_555 -0.253 -0.040 -0.486 12.629 -19.906 -0.361 47 A_C102:G92_A A 102 ? A 92 ? 19 1 1 A U 103 1_555 A A 91 1_555 -0.014 -0.036 0.117 -5.772 -8.287 0.212 48 A_U103:A91_A A 103 ? A 91 ? 20 1 1 A C 104 1_555 A G 90 1_555 0.318 -0.097 -0.133 2.266 -11.656 0.989 49 A_C104:G90_A A 104 ? A 90 ? 19 1 1 A U 105 1_555 A A 89 1_555 -0.381 -0.114 -0.048 3.128 -9.468 4.297 50 A_U105:A89_A A 105 ? A 89 ? 20 1 1 A G 106 1_555 A C 88 1_555 0.076 -0.186 0.126 -2.635 -8.627 -3.870 51 A_G106:C88_A A 106 ? A 88 ? 19 1 1 A C 107 1_555 A G 87 1_555 -0.056 -0.321 -0.067 4.334 -13.626 -0.760 52 A_C107:G87_A A 107 ? A 87 ? 19 1 1 A A 108 1_555 A U 86 1_555 -0.132 -0.240 0.221 -1.725 -18.342 0.925 53 A_A108:U86_A A 108 ? A 86 ? 20 1 1 A U 109 1_555 A G 85 1_555 2.376 -0.490 -0.035 7.686 -13.259 2.226 54 A_U109:G85_A A 109 ? A 85 ? 28 1 1 A C 111 1_555 A G 84 1_555 0.070 -0.102 -0.270 -0.556 -9.790 0.917 55 A_C111:G84_A A 111 ? A 84 ? 19 1 1 A C 112 1_555 A G 83 1_555 0.363 -0.251 0.170 -4.324 -5.214 0.907 56 A_C112:G83_A A 112 ? A 83 ? 19 1 1 A U 113 1_555 A A 82 1_555 -0.139 -0.059 -0.264 13.291 2.412 2.523 57 A_U113:A82_A A 113 ? A 82 ? 20 1 1 A G 80 1_555 A A 81 1_555 6.463 3.090 -0.735 -23.931 45.979 12.179 58 A_G80:A81_A A 80 ? A 81 ? ? ? 1 A A 129 1_555 A G 125 1_555 -7.183 -4.689 0.814 -8.700 8.537 -12.086 59 A_A129:G125_A A 129 ? A 125 ? ? ? 1 A C 130 1_555 A G 124 1_555 -0.043 -0.106 -0.061 11.239 0.148 0.469 60 A_C130:G124_A A 130 ? A 124 ? 19 1 1 A C 131 1_555 A G 123 1_555 0.246 -0.041 -0.509 12.962 -3.510 7.558 61 A_C131:G123_A A 131 ? A 123 ? 19 1 1 A C 132 1_555 A G 122 1_555 0.108 -0.110 -0.069 1.817 -12.696 1.741 62 A_C132:G122_A A 132 ? A 122 ? 19 1 1 A A 133 1_555 A U 121 1_555 0.333 0.135 0.023 -6.167 -14.514 2.177 63 A_A133:U121_A A 133 ? A 121 ? 20 1 1 A U 134 1_555 A A 120 1_555 -0.150 -0.011 0.280 -3.200 -13.883 2.846 64 A_U134:A120_A A 134 ? A 120 ? 20 1 1 A A 135 1_555 A U 119 1_555 0.017 -0.060 0.081 -1.840 -10.817 -4.323 65 A_A135:U119_A A 135 ? A 119 ? 20 1 1 A C 136 1_555 A G 118 1_555 0.576 -0.293 0.140 -0.027 -19.521 -1.823 66 A_C136:G118_A A 136 ? A 118 ? 19 1 1 A C 137 1_555 A G 117 1_555 0.137 -0.081 0.448 -3.195 -12.768 -1.722 67 A_C137:G117_A A 137 ? A 117 ? 19 1 1 A A 138 1_555 A G 116 1_555 0.382 1.307 -0.408 1.153 -9.958 -24.413 68 A_A138:G116_A A 138 ? A 116 ? 8 ? 1 A C 139 1_555 A G 115 1_555 0.712 -0.445 -0.243 4.216 -14.653 -6.858 69 A_C139:G115_A A 139 ? A 115 ? 19 1 1 A U 140 1_555 A G 114 1_555 2.321 -0.744 -0.115 -0.479 -9.644 -0.963 70 A_U140:G114_A A 140 ? A 114 ? 28 1 1 A G 141 1_555 A A 162 1_555 0.034 1.590 -0.270 -3.643 -26.196 -5.896 71 A_G141:A162_A A 141 ? A 162 ? 8 1 1 A U 142 1_555 A G 161 1_555 1.537 -0.357 0.299 4.880 -17.334 0.780 72 A_U142:G161_A A 142 ? A 161 ? 28 1 1 A C 143 1_555 A G 160 1_555 0.035 -0.209 0.260 11.878 -18.964 -6.283 73 A_C143:G160_A A 143 ? A 160 ? 19 1 1 A A 144 1_555 A U 159 1_555 -0.024 -0.255 1.007 14.515 -9.481 2.494 74 A_A144:U159_A A 144 ? A 159 ? 20 1 1 A C 145 1_555 A G 158 1_555 -0.085 0.098 0.046 6.656 -17.294 2.204 75 A_C145:G158_A A 145 ? A 158 ? 19 1 1 A G 146 1_555 A C 157 1_555 -0.272 -0.081 0.259 6.552 -4.417 0.223 76 A_G146:C157_A A 146 ? A 157 ? 19 1 1 A G 147 1_555 A C 156 1_555 0.342 -0.035 -0.387 -11.436 -14.541 2.705 77 A_G147:C156_A A 147 ? A 156 ? 19 1 1 A A 148 1_555 A U 155 1_555 0.301 0.229 -0.419 -13.132 -7.667 -1.718 78 A_A148:U155_A A 148 ? A 155 ? 20 1 1 A G 149 1_555 A C 154 1_555 0.026 -0.280 -0.373 -5.633 -8.964 -3.992 79 A_G149:C154_A A 149 ? A 154 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A CCC 174 1_555 A G 2 1_555 A U 173 1_555 0.300 -2.168 2.859 -8.268 7.176 27.671 -5.404 -1.942 2.071 14.315 16.493 29.719 1 AA_GTP1G2:U173CCC174_AA A 1 ? A 174 ? A 2 ? A 173 ? 1 A G 2 1_555 A U 173 1_555 A C 3 1_555 A G 172 1_555 0.021 -1.337 3.069 0.073 4.273 40.400 -2.361 -0.023 2.919 6.166 -0.105 40.616 2 AA_G2C3:G172U173_AA A 2 ? A 173 ? A 3 ? A 172 ? 1 A C 3 1_555 A G 172 1_555 A C 4 1_555 A G 171 1_555 -0.249 -1.707 3.385 -2.903 7.630 38.355 -3.449 0.028 3.014 11.455 4.358 39.182 3 AA_C3C4:G171G172_AA A 3 ? A 172 ? A 4 ? A 171 ? 1 A C 4 1_555 A G 171 1_555 A G 5 1_555 A C 170 1_555 0.486 -2.038 2.960 1.110 4.547 30.019 -4.678 -0.735 2.646 8.712 -2.127 30.374 4 AA_C4G5:C170G171_AA A 4 ? A 171 ? A 5 ? A 170 ? 1 A G 5 1_555 A C 170 1_555 A A 6 1_555 A U 169 1_555 -0.836 -1.987 3.338 1.426 6.460 23.821 -6.482 2.360 2.660 15.276 -3.372 24.709 5 AA_G5A6:U169C170_AA A 5 ? A 170 ? A 6 ? A 169 ? 1 A A 6 1_555 A U 169 1_555 A C 7 1_555 A G 168 1_555 0.615 -1.341 3.075 0.038 3.433 36.653 -2.554 -0.969 2.942 5.444 -0.061 36.808 6 AA_A6C7:G168U169_AA A 6 ? A 169 ? A 7 ? A 168 ? 1 A C 7 1_555 A G 168 1_555 A G 8 1_555 A C 167 1_555 -0.739 -2.237 3.460 -3.938 15.489 30.936 -5.927 0.684 2.201 26.904 6.841 34.730 7 AA_C7G8:C167G168_AA A 7 ? A 168 ? A 8 ? A 167 ? 1 A G 8 1_555 A C 167 1_555 A G 9 1_555 A C 166 1_555 0.597 -2.128 3.478 4.588 4.789 31.496 -4.721 -0.233 3.182 8.703 -8.336 32.169 8 AA_G8G9:C166C167_AA A 8 ? A 167 ? A 9 ? A 166 ? 1 A G 9 1_555 A C 166 1_555 A A 10 1_555 A G 165 1_555 -1.306 -1.785 3.138 4.353 1.960 31.925 -3.531 3.059 2.828 3.539 -7.859 32.271 9 AA_G9A10:G165C166_AA A 9 ? A 166 ? A 10 ? A 165 ? 1 A A 10 1_555 A G 165 1_555 A G 11 1_555 A G 163 1_555 1.775 3.258 0.343 73.880 -153.952 -61.059 -1.019 1.185 2.042 79.022 37.922 -172.045 10 AA_A10G11:G163G165_AA A 10 ? A 165 ? A 11 ? A 163 ? 1 A G 11 1_555 A G 163 1_555 A G 12 1_555 A C 79 1_555 -2.719 6.148 0.523 -17.027 -164.530 104.859 2.645 1.409 -3.124 -83.759 8.668 171.118 11 AA_G11G12:C79G163_AA A 11 ? A 163 ? A 12 ? A 79 ? 1 A G 12 1_555 A C 79 1_555 A G 14 1_555 A C 78 1_555 1.570 -2.412 3.603 -2.822 6.714 30.354 -5.766 -3.458 2.863 12.596 5.294 31.195 12 AA_G12G14:C78C79_AA A 12 ? A 79 ? A 14 ? A 78 ? 1 A G 14 1_555 A C 78 1_555 A C 15 1_555 A G 77 1_555 -1.510 -2.461 3.119 -1.697 2.592 26.423 -5.983 2.866 2.958 5.647 3.696 26.601 13 AA_G14C15:G77C78_AA A 14 ? A 78 ? A 15 ? A 77 ? 1 A C 15 1_555 A G 77 1_555 A G 16 1_555 A C 76 1_555 -0.434 -1.718 3.183 -2.089 7.086 30.251 -4.448 0.442 2.743 13.330 3.930 31.119 14 AA_C15G16:C76G77_AA A 15 ? A 77 ? A 16 ? A 76 ? 1 A G 16 1_555 A C 76 1_555 A C 17 1_555 A G 75 1_555 -0.491 -1.715 3.201 -1.867 2.930 32.678 -3.514 0.561 3.063 5.189 3.306 32.857 15 AA_G16C17:G75C76_AA A 16 ? A 76 ? A 17 ? A 75 ? 1 A C 17 1_555 A G 75 1_555 A C 18 1_555 A G 74 1_555 0.314 -1.753 3.463 -0.356 5.858 34.026 -3.876 -0.586 3.123 9.919 0.603 34.514 16 AA_C17C18:G74G75_AA A 17 ? A 75 ? A 18 ? A 74 ? 1 A C 18 1_555 A G 74 1_555 A C 19 1_555 A G 73 1_555 -0.400 -1.832 3.320 1.670 3.389 27.279 -4.661 1.240 3.044 7.142 -3.519 27.534 17 AA_C18C19:G73G74_AA A 18 ? A 74 ? A 19 ? A 73 ? 1 A C 19 1_555 A G 73 1_555 A G 20 1_555 A A 72 1_555 -1.361 0.872 4.548 13.768 24.806 51.810 -0.950 2.411 4.106 26.277 -14.584 58.595 18 AA_C19G20:A72G73_AA A 19 ? A 73 ? A 20 ? A 72 ? 1 A G 20 1_555 A A 72 1_555 A A 21 1_555 A G 71 1_555 -0.233 0.765 3.378 -11.610 7.229 -21.945 -3.698 -3.712 2.564 -17.027 -27.345 -25.814 19 AA_G20A21:G71A72_AA A 20 ? A 72 ? A 21 ? A 71 ? 1 A A 21 1_555 A G 71 1_555 A G 22 1_555 A C 70 1_555 1.299 -0.773 3.606 -0.773 5.552 63.270 -1.000 -1.272 3.520 5.282 0.735 63.492 20 AA_A21G22:C70G71_AA A 21 ? A 71 ? A 22 ? A 70 ? 1 A G 22 1_555 A C 70 1_555 A A 23 1_555 A G 69 1_555 -0.818 -2.133 3.326 3.639 5.509 29.990 -5.053 2.222 2.783 10.487 -6.928 30.692 21 AA_G22A23:G69C70_AA A 22 ? A 70 ? A 23 ? A 69 ? 1 A A 23 1_555 A G 69 1_555 A A 126 1_555 A G 68 1_555 -0.973 2.531 4.950 131.563 39.320 -138.724 -1.514 0.306 4.740 -20.020 66.986 -165.259 22 AA_A23A126:G68G69_AA A 23 ? A 69 ? A 126 ? A 68 ? 1 A A 126 1_555 A G 68 1_555 A G 25 1_555 A A 67 1_555 -5.137 -2.367 -2.791 128.631 -78.692 -159.122 1.069 -2.760 -2.196 39.467 64.513 -174.763 23 AA_A126G25:A67G68_AA A 126 ? A 68 ? A 25 ? A 67 ? 1 A G 25 1_555 A A 67 1_555 A A 26 1_555 A A 66 1_555 -3.133 0.812 1.554 87.432 154.272 111.685 0.089 1.746 0.815 77.337 -43.830 178.498 24 AA_G25A26:A66A67_AA A 25 ? A 67 ? A 26 ? A 66 ? 1 A A 26 1_555 A A 66 1_555 A U 28 1_555 A A 65 1_555 1.501 -3.205 0.407 124.823 124.639 57.684 -1.509 -0.845 -0.856 62.978 -63.071 176.844 25 AA_A26U28:A65A66_AA A 26 ? A 66 ? A 28 ? A 65 ? 1 A U 28 1_555 A A 65 1_555 A A 29 1_555 A G 64 1_555 4.943 -0.592 3.596 1.739 -0.022 -15.850 2.151 19.120 3.038 0.078 6.282 -15.945 26 AA_U28A29:G64A65_AA A 28 ? A 65 ? A 29 ? A 64 ? 1 A A 29 1_555 A G 64 1_555 A G 30 1_555 A U 63 1_555 -0.405 -0.863 3.400 -8.004 4.491 58.472 -1.113 -0.014 3.356 4.566 8.139 59.125 27 AA_A29G30:U63G64_AA A 29 ? A 64 ? A 30 ? A 63 ? 1 A G 30 1_555 A U 63 1_555 A G 31 1_555 A C 62 1_555 -0.890 -1.476 3.451 -6.920 13.073 32.236 -4.359 0.443 2.791 22.147 11.724 35.386 28 AA_G30G31:C62U63_AA A 30 ? A 63 ? A 31 ? A 62 ? 1 A G 31 1_555 A C 62 1_555 A C 32 1_555 A G 61 1_555 0.127 -1.367 3.183 -1.674 4.261 35.151 -2.838 -0.442 2.993 7.019 2.757 35.438 29 AA_G31C32:G61C62_AA A 31 ? A 62 ? A 32 ? A 61 ? 1 A C 32 1_555 A G 61 1_555 A U 33 1_555 A G 60 1_555 1.288 -1.510 3.564 4.932 4.336 40.935 -2.639 -1.247 3.519 6.151 -6.998 41.436 30 AA_C32U33:G60G61_AA A 32 ? A 61 ? A 33 ? A 60 ? 1 A U 33 1_555 A G 60 1_555 A G 34 1_555 A C 59 1_555 -1.133 -1.952 3.273 0.140 18.755 22.892 -7.009 2.247 1.320 39.767 -0.296 29.514 31 AA_U33G34:C59G60_AA A 33 ? A 60 ? A 34 ? A 59 ? 1 A G 34 1_555 A C 59 1_555 A U 35 1_555 A A 58 1_555 -0.961 -1.308 3.073 4.616 9.644 25.950 -4.628 2.907 2.251 20.407 -9.769 28.031 32 AA_G34U35:A58C59_AA A 34 ? A 59 ? A 35 ? A 58 ? 1 A U 35 1_555 A A 58 1_555 A C 36 1_555 A G 57 1_555 1.410 -1.516 3.216 -6.627 9.878 30.350 -4.207 -3.522 2.274 18.021 12.091 32.547 33 AA_U35C36:G57A58_AA A 35 ? A 58 ? A 36 ? A 57 ? 1 A C 36 1_555 A G 57 1_555 A C 37 1_555 A G 56 1_555 0.217 -2.003 3.442 3.014 -4.613 30.923 -2.749 0.221 3.698 -8.566 -5.597 31.399 34 AA_C36C37:G56G57_AA A 36 ? A 57 ? A 37 ? A 56 ? 1 A C 37 1_555 A G 56 1_555 A C 38 1_555 A G 55 1_555 0.070 -1.920 3.221 4.370 5.058 29.950 -4.565 0.675 2.848 9.636 -8.325 30.670 35 AA_C37C38:G55G56_AA A 37 ? A 56 ? A 38 ? A 55 ? 1 A C 38 1_555 A G 55 1_555 A C 41 1_555 A G 54 1_555 -1.015 -2.451 3.751 -3.569 3.509 39.785 -4.028 1.021 3.604 5.132 5.219 40.086 36 AA_C38C41:G54G55_AA A 38 ? A 55 ? A 41 ? A 54 ? 1 A C 41 1_555 A G 54 1_555 A U 52 1_555 A U 40 1_555 -0.397 0.811 2.607 8.575 -9.054 81.596 0.791 0.468 2.479 -6.892 -6.527 82.379 37 AA_C41U52:U40G54_AA A 41 ? A 54 ? A 52 ? A 40 ? 1 A A 42 1_555 A A 50 1_555 A C 95 1_555 A G 49 1_555 3.264 -2.349 3.231 -4.172 0.287 76.489 -1.903 -2.751 3.069 0.232 3.367 76.586 38 AA_A42C95:G49A50_AA A 42 ? A 50 ? A 95 ? A 49 ? 1 A C 95 1_555 A G 49 1_555 A C 96 1_555 A G 48 1_555 -0.123 -2.110 3.384 -6.399 13.470 26.929 -6.352 -0.892 2.092 26.502 12.590 30.715 39 AA_C95C96:G48G49_AA A 95 ? A 49 ? A 96 ? A 48 ? 1 A C 96 1_555 A G 48 1_555 A U 97 1_555 A A 47 1_555 -0.243 -1.618 3.215 -4.917 4.068 32.059 -3.551 -0.384 2.996 7.276 8.795 32.672 40 AA_C96U97:A47G48_AA A 96 ? A 48 ? A 97 ? A 47 ? 1 A U 97 1_555 A A 47 1_555 A C 98 1_555 A G 46 1_555 -0.247 -2.153 3.465 2.562 9.599 37.864 -4.348 0.670 2.835 14.489 -3.867 39.100 41 AA_U97C98:G46A47_AA A 97 ? A 47 ? A 98 ? A 46 ? 1 A C 98 1_555 A G 46 1_555 A C 99 1_555 A G 45 1_555 -0.106 -1.971 3.140 2.584 6.157 27.069 -5.408 0.771 2.615 12.906 -5.417 27.866 42 AA_C98C99:G45G46_AA A 98 ? A 46 ? A 99 ? A 45 ? 1 A C 99 1_555 A G 45 1_555 A C 100 1_555 A G 44 1_555 1.145 -1.969 3.421 3.049 14.174 39.655 -4.148 -1.290 2.673 20.097 -4.323 42.122 43 AA_C99C100:G44G45_AA A 99 ? A 45 ? A 100 ? A 44 ? 1 A C 100 1_555 A G 44 1_555 A G 101 1_555 A U 93 1_555 2.616 -0.827 3.136 -3.422 7.427 38.450 -2.028 -4.260 2.703 11.124 5.125 39.278 44 AA_C100G101:U93G44_AA A 100 ? A 44 ? A 101 ? A 93 ? 1 A G 101 1_555 A U 93 1_555 A C 102 1_555 A G 92 1_555 -0.728 -1.228 2.908 -3.756 10.320 39.216 -2.745 0.691 2.574 15.021 5.467 40.667 45 AA_G101C102:G92U93_AA A 101 ? A 93 ? A 102 ? A 92 ? 1 A C 102 1_555 A G 92 1_555 A U 103 1_555 A A 91 1_555 -0.188 -1.931 3.836 -9.209 11.116 35.300 -4.513 -0.996 3.065 17.457 14.462 38.051 46 AA_C102U103:A91G92_AA A 102 ? A 92 ? A 103 ? A 91 ? 1 A U 103 1_555 A A 91 1_555 A C 104 1_555 A G 90 1_555 -0.197 -1.514 3.002 1.230 3.586 32.657 -3.222 0.536 2.815 6.351 -2.178 32.871 47 AA_U103C104:G90A91_AA A 103 ? A 91 ? A 104 ? A 90 ? 1 A C 104 1_555 A G 90 1_555 A U 105 1_555 A A 89 1_555 0.435 -1.903 3.195 -0.672 6.782 26.125 -5.640 -1.086 2.614 14.686 1.456 26.984 48 AA_C104U105:A89G90_AA A 104 ? A 90 ? A 105 ? A 89 ? 1 A U 105 1_555 A A 89 1_555 A G 106 1_555 A C 88 1_555 -0.801 -1.760 3.402 -2.347 11.248 33.415 -4.512 0.986 2.734 18.882 3.939 35.282 49 AA_U105G106:C88A89_AA A 105 ? A 89 ? A 106 ? A 88 ? 1 A G 106 1_555 A C 88 1_555 A C 107 1_555 A G 87 1_555 0.456 -1.817 3.082 3.734 4.795 30.330 -4.252 -0.198 2.803 9.051 -7.047 30.919 50 AA_G106C107:G87C88_AA A 106 ? A 88 ? A 107 ? A 87 ? 1 A C 107 1_555 A G 87 1_555 A A 108 1_555 A U 86 1_555 0.474 -1.599 3.227 2.712 14.012 32.778 -4.436 -0.421 2.397 23.492 -4.547 35.672 51 AA_C107A108:U86G87_AA A 107 ? A 87 ? A 108 ? A 86 ? 1 A A 108 1_555 A U 86 1_555 A U 109 1_555 A G 85 1_555 0.141 -1.032 3.041 4.370 6.121 41.420 -2.015 0.215 2.867 8.569 -6.118 42.068 52 AA_A108U109:G85U86_AA A 108 ? A 86 ? A 109 ? A 85 ? 1 A U 109 1_555 A G 85 1_555 A C 111 1_555 A G 84 1_555 -1.973 -1.007 3.141 3.709 12.687 43.147 -2.339 2.876 2.591 16.788 -4.907 45.033 53 AA_U109C111:G84G85_AA A 109 ? A 85 ? A 111 ? A 84 ? 1 A C 111 1_555 A G 84 1_555 A C 112 1_555 A G 83 1_555 -0.764 -1.939 3.357 -3.747 8.825 31.156 -4.937 0.734 2.789 15.963 6.778 32.563 54 AA_C111C112:G83G84_AA A 111 ? A 84 ? A 112 ? A 83 ? 1 A C 112 1_555 A G 83 1_555 A U 113 1_555 A A 82 1_555 -0.106 -1.903 2.915 0.691 2.368 23.583 -5.308 0.456 2.709 5.773 -1.684 23.710 55 AA_C112U113:A82G83_AA A 112 ? A 83 ? A 113 ? A 82 ? 1 A U 113 1_555 A A 82 1_555 A G 80 1_555 A A 81 1_555 -4.718 1.249 3.648 121.161 95.271 -144.291 -1.006 -1.881 4.360 -48.008 61.055 -172.130 56 AA_U113G80:A81A82_AA A 113 ? A 82 ? A 80 ? A 81 ? 1 A A 129 1_555 A G 125 1_555 A C 130 1_555 A G 124 1_555 0.542 -0.947 2.834 -0.596 9.476 67.978 -1.140 -0.500 2.694 8.433 0.531 68.558 57 AA_A129C130:G124G125_AA A 129 ? A 125 ? A 130 ? A 124 ? 1 A C 130 1_555 A G 124 1_555 A C 131 1_555 A G 123 1_555 0.390 -1.967 3.184 2.732 5.115 30.138 -4.653 -0.237 2.843 9.724 -5.194 30.678 58 AA_C130C131:G123G124_AA A 130 ? A 124 ? A 131 ? A 123 ? 1 A C 131 1_555 A G 123 1_555 A C 132 1_555 A G 122 1_555 -0.007 -2.184 3.501 0.488 9.135 30.765 -5.560 0.099 2.756 16.759 -0.896 32.065 59 AA_C131C132:G122G123_AA A 131 ? A 123 ? A 132 ? A 122 ? 1 A C 132 1_555 A G 122 1_555 A A 133 1_555 A U 121 1_555 -0.344 -1.698 3.458 0.755 10.423 29.648 -5.039 0.774 2.711 19.618 -1.420 31.397 60 AA_C132A133:U121G122_AA A 132 ? A 122 ? A 133 ? A 121 ? 1 A A 133 1_555 A U 121 1_555 A U 134 1_555 A A 120 1_555 -0.025 -1.234 3.169 -0.763 9.228 27.920 -4.237 -0.100 2.635 18.493 1.528 29.387 61 AA_A133U134:A120U121_AA A 133 ? A 121 ? A 134 ? A 120 ? 1 A U 134 1_555 A A 120 1_555 A A 135 1_555 A U 119 1_555 -0.509 -1.323 3.094 -2.151 14.521 35.394 -3.624 0.539 2.413 22.717 3.365 38.227 62 AA_U134A135:U119A120_AA A 134 ? A 120 ? A 135 ? A 119 ? 1 A A 135 1_555 A U 119 1_555 A C 136 1_555 A G 118 1_555 -0.115 -1.480 3.189 -0.326 7.287 34.920 -3.401 0.144 2.833 11.981 0.537 35.651 63 AA_A135C136:G118U119_AA A 135 ? A 119 ? A 136 ? A 118 ? 1 A C 136 1_555 A G 118 1_555 A C 137 1_555 A G 117 1_555 0.220 -1.672 3.358 -0.398 3.886 32.441 -3.643 -0.461 3.139 6.925 0.709 32.670 64 AA_C136C137:G117G118_AA A 136 ? A 118 ? A 137 ? A 117 ? 1 A C 137 1_555 A G 117 1_555 A A 138 1_555 A G 116 1_555 -0.819 -1.662 3.112 6.693 10.204 25.533 -5.371 2.966 2.037 21.585 -14.158 28.256 65 AA_C137A138:G116G117_AA A 137 ? A 117 ? A 138 ? A 116 ? 1 A A 138 1_555 A G 116 1_555 A C 139 1_555 A G 115 1_555 0.923 -1.396 3.230 -1.485 0.133 34.193 -2.392 -1.797 3.183 0.226 2.524 34.224 66 AA_A138C139:G115G116_AA A 138 ? A 116 ? A 139 ? A 115 ? 1 A C 139 1_555 A G 115 1_555 A U 140 1_555 A G 114 1_555 0.498 -1.545 3.479 0.741 4.518 40.494 -2.738 -0.630 3.303 6.502 -1.066 40.741 67 AA_C139U140:G114G115_AA A 139 ? A 115 ? A 140 ? A 114 ? 1 A U 140 1_555 A G 114 1_555 A G 141 1_555 A A 162 1_555 -0.190 -3.105 3.223 2.832 20.736 22.645 -8.401 0.705 0.303 42.853 -5.854 30.742 68 AA_U140G141:A162G114_AA A 140 ? A 114 ? A 141 ? A 162 ? 1 A G 141 1_555 A A 162 1_555 A U 142 1_555 A G 161 1_555 0.642 -0.834 3.088 -4.034 11.637 34.864 -2.726 -1.503 2.600 18.715 6.487 36.912 69 AA_G141U142:G161A162_AA A 141 ? A 162 ? A 142 ? A 161 ? 1 A U 142 1_555 A G 161 1_555 A C 143 1_555 A G 160 1_555 0.097 -0.945 2.938 3.361 7.629 30.078 -3.014 0.373 2.620 14.357 -6.325 31.187 70 AA_U142C143:G160G161_AA A 142 ? A 161 ? A 143 ? A 160 ? 1 A C 143 1_555 A G 160 1_555 A A 144 1_555 A U 159 1_555 -0.109 -1.971 2.855 -9.338 6.241 32.013 -4.211 -1.052 2.378 10.906 16.317 33.877 71 AA_C143A144:U159G160_AA A 143 ? A 160 ? A 144 ? A 159 ? 1 A A 144 1_555 A U 159 1_555 A C 145 1_555 A G 158 1_555 -0.089 -1.760 3.429 6.002 5.305 33.939 -3.751 1.067 3.068 8.933 -10.108 34.844 72 AA_A144C145:G158U159_AA A 144 ? A 159 ? A 145 ? A 158 ? 1 A C 145 1_555 A G 158 1_555 A G 146 1_555 A C 157 1_555 -0.165 -2.057 3.021 -2.293 12.924 29.562 -5.535 -0.029 1.978 23.901 4.240 32.285 73 AA_C145G146:C157G158_AA A 145 ? A 158 ? A 146 ? A 157 ? 1 A G 146 1_555 A C 157 1_555 A G 147 1_555 A C 156 1_555 0.686 -1.923 3.682 6.420 15.478 33.224 -5.144 -0.198 2.645 25.176 -10.442 37.104 74 AA_G146G147:C156C157_AA A 146 ? A 157 ? A 147 ? A 156 ? 1 A G 147 1_555 A C 156 1_555 A A 148 1_555 A U 155 1_555 -1.322 -1.596 3.298 -5.730 9.901 30.773 -4.484 1.383 2.856 17.900 10.360 32.783 75 AA_G147A148:U155C156_AA A 147 ? A 156 ? A 148 ? A 155 ? 1 A A 148 1_555 A U 155 1_555 A G 149 1_555 A C 154 1_555 -0.121 -1.759 3.155 -2.636 4.939 26.975 -4.806 -0.338 2.794 10.446 5.574 27.540 76 AA_A148G149:C154U155_AA A 148 ? A 155 ? A 149 ? A 154 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'SODIUM ION' NA 4 'N~6~-[(1Z)-ethanimidoyl]-L-lysine' IEL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DIL _pdbx_initial_refinement_model.details 'pdb entry 3DIL' #