data_3DIY # _entry.id 3DIY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3DIY pdb_00003diy 10.2210/pdb3diy/pdb NDB UR0156 ? ? RCSB RCSB048095 ? ? WWPDB D_1000048095 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3DIG . unspecified PDB 3DIL . unspecified PDB 3DIM . unspecified PDB 3DIO . unspecified PDB 3DIQ . unspecified PDB 3DIR . unspecified PDB 3DIS . unspecified PDB 3DIX . unspecified PDB 3DIZ . unspecified PDB 3DJ0 . unspecified PDB 3DJ2 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 3DIY _pdbx_database_status.recvd_initial_deposition_date 2008-06-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Serganov, A.A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural insights into amino acid binding and gene control by a lysine riboswitch.' _citation.journal_abbrev Nature _citation.journal_volume 455 _citation.page_first 1263 _citation.page_last 1267 _citation.year 2008 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18784651 _citation.pdbx_database_id_DOI 10.1038/nature07326 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serganov, A.' 1 ? primary 'Huang, L.' 2 ? primary 'Patel, D.J.' 3 ? # _cell.entry_id 3DIY _cell.length_a 54.193 _cell.length_b 78.662 _cell.length_c 140.522 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 3DIY _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (174-MER)' 56715.578 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 8 ? ? ? ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 5 non-polymer syn LYSINE 147.195 1 ? ? ? ? 6 water nat water 18.015 37 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(GDP)GCCGACGGAGGCGCGCCCGAGAUGAGUAGGCUGUCCCAUCAGGGGAGGAAUCGGGGACGGCUGAAAGGCGAGGGC GCCGAAGGGUGCAGAGUUCCUCCCGCUCUGCAUGCCUGGGGGUAUGGGGAAUACCCAUACCACUGUCACGGAGGUCUCUC CGUGGAGAGCCGUCGGU(CCC) ; _entity_poly.pdbx_seq_one_letter_code_can ;GGCCGACGGAGGCGCGCCCGAGAUGAGUAGGCUGUCCCAUCAGGGGAGGAAUCGGGGACGGCUGAAAGGCGAGGGCGCCG AAGGGUGCAGAGUUCCUCCCGCUCUGCAUGCCUGGGGGUAUGGGGAAUACCCAUACCACUGUCACGGAGGUCUCUCCGUG GAGAGCCGUCGGUC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GDP n 1 2 G n 1 3 C n 1 4 C n 1 5 G n 1 6 A n 1 7 C n 1 8 G n 1 9 G n 1 10 A n 1 11 G n 1 12 G n 1 13 C n 1 14 G n 1 15 C n 1 16 G n 1 17 C n 1 18 C n 1 19 C n 1 20 G n 1 21 A n 1 22 G n 1 23 A n 1 24 U n 1 25 G n 1 26 A n 1 27 G n 1 28 U n 1 29 A n 1 30 G n 1 31 G n 1 32 C n 1 33 U n 1 34 G n 1 35 U n 1 36 C n 1 37 C n 1 38 C n 1 39 A n 1 40 U n 1 41 C n 1 42 A n 1 43 G n 1 44 G n 1 45 G n 1 46 G n 1 47 A n 1 48 G n 1 49 G n 1 50 A n 1 51 A n 1 52 U n 1 53 C n 1 54 G n 1 55 G n 1 56 G n 1 57 G n 1 58 A n 1 59 C n 1 60 G n 1 61 G n 1 62 C n 1 63 U n 1 64 G n 1 65 A n 1 66 A n 1 67 A n 1 68 G n 1 69 G n 1 70 C n 1 71 G n 1 72 A n 1 73 G n 1 74 G n 1 75 G n 1 76 C n 1 77 G n 1 78 C n 1 79 C n 1 80 G n 1 81 A n 1 82 A n 1 83 G n 1 84 G n 1 85 G n 1 86 U n 1 87 G n 1 88 C n 1 89 A n 1 90 G n 1 91 A n 1 92 G n 1 93 U n 1 94 U n 1 95 C n 1 96 C n 1 97 U n 1 98 C n 1 99 C n 1 100 C n 1 101 G n 1 102 C n 1 103 U n 1 104 C n 1 105 U n 1 106 G n 1 107 C n 1 108 A n 1 109 U n 1 110 G n 1 111 C n 1 112 C n 1 113 U n 1 114 G n 1 115 G n 1 116 G n 1 117 G n 1 118 G n 1 119 U n 1 120 A n 1 121 U n 1 122 G n 1 123 G n 1 124 G n 1 125 G n 1 126 A n 1 127 A n 1 128 U n 1 129 A n 1 130 C n 1 131 C n 1 132 C n 1 133 A n 1 134 U n 1 135 A n 1 136 C n 1 137 C n 1 138 A n 1 139 C n 1 140 U n 1 141 G n 1 142 U n 1 143 C n 1 144 A n 1 145 C n 1 146 G n 1 147 G n 1 148 A n 1 149 G n 1 150 G n 1 151 U n 1 152 C n 1 153 U n 1 154 C n 1 155 U n 1 156 C n 1 157 C n 1 158 G n 1 159 U n 1 160 G n 1 161 G n 1 162 A n 1 163 G n 1 164 A n 1 165 G n 1 166 C n 1 167 C n 1 168 G n 1 169 U n 1 170 C n 1 171 G n 1 172 G n 1 173 U n 1 174 CCC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'In vitro transcribed RNA from the Thermotoga maritima MSB8 asd gene' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 3DIY _struct_ref.pdbx_db_accession 3DIY _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3DIY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 3DIY _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 174 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.entry_id 3DIY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.7 _exptl_crystal_grow.pdbx_details '18% PEG 4000, 0.1M Sodium Citrate, 20% isopropanol, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 'Sodium Citrate' ? ? ? 1 3 1 isopropanol ? ? ? 1 4 2 'PEG 4000' ? ? ? 1 5 2 'Sodium Citrate' ? ? ? 1 6 2 isopropanol ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2008-03-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.24 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.24 # _reflns.entry_id 3DIY _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 20.0 _reflns.number_all 16969 _reflns.number_obs 16392 _reflns.percent_possible_obs 96.6 _reflns.pdbx_Rmerge_I_obs 0.095 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 21.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 95.9 _reflns_shell.Rmerge_I_obs 0.588 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy 5.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1658 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 3DIY _refine.ls_number_reflns_obs 15510 _refine.ls_number_reflns_all 16107 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.71 _refine.ls_percent_reflns_obs 96.29 _refine.ls_R_factor_obs 0.19099 _refine.ls_R_factor_all 0.19099 _refine.ls_R_factor_R_work 0.18872 _refine.ls_R_factor_R_free 0.23671 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 822 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.916 _refine.B_iso_mean 35.039 _refine.aniso_B[1][1] 0.20 _refine.aniso_B[2][2] -1.91 _refine.aniso_B[3][3] 1.71 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'pdb entry 3DIL' _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model tls _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 2.039 _refine.pdbx_overall_ESU_R_Free 0.327 _refine.overall_SU_ML 0.233 _refine.overall_SU_B 24.836 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 3DIY _refine_analyze.Luzzati_coordinate_error_obs 0.233 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3756 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 37 _refine_hist.number_atoms_total 3814 _refine_hist.d_res_high 2.71 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.021 ? 4213 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.239 2.999 ? 6572 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 8.221 15.000 ? 4 'X-RAY DIFFRACTION' ? r_chiral_restr 0.051 0.200 ? 870 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1838 'X-RAY DIFFRACTION' ? r_nbd_refined 0.155 0.200 ? 1455 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.265 0.200 ? 2586 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.134 0.200 ? 137 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.147 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.126 0.200 ? 33 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.171 0.200 ? 8 'X-RAY DIFFRACTION' ? r_mcbond_it 0.123 1.500 ? 5 'X-RAY DIFFRACTION' ? r_mcangle_it 0.312 2.000 ? 7 'X-RAY DIFFRACTION' ? r_scbond_it 0.666 3.000 ? 4450 'X-RAY DIFFRACTION' ? r_scangle_it 1.045 4.500 ? 6565 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.71 _refine_ls_shell.d_res_low 2.776 _refine_ls_shell.number_reflns_R_work 1057 _refine_ls_shell.R_factor_R_work 0.414 _refine_ls_shell.percent_reflns_obs 93.44 _refine_ls_shell.R_factor_R_free 0.545 _refine_ls_shell.R_factor_R_free_error 0.327 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1126 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3DIY _struct.title 'Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine, Mn2+ soak' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3DIY _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'riboswitch, lysine, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 4 ? L N N 4 ? M N N 5 ? N N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GDP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? A GDP 1 A G 2 1_555 ? ? ? ? ? ? ? 1.598 ? ? covale2 covale both ? A U 173 "O3'" ? ? ? 1_555 A CCC 174 P ? ? A U 173 A CCC 174 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? A G 9 O6 ? ? ? 1_555 J NA . NA ? ? A G 9 A NA 208 1_555 ? ? ? ? ? ? ? 2.736 ? ? metalc2 metalc ? ? A G 11 "O2'" ? ? ? 1_555 B K . K ? ? A G 11 A K 200 1_555 ? ? ? ? ? ? ? 2.962 ? ? metalc3 metalc ? ? A G 11 OP2 ? ? ? 1_555 G NA . NA ? ? A G 11 A NA 205 1_555 ? ? ? ? ? ? ? 2.841 ? ? metalc4 metalc ? ? A G 12 O6 ? ? ? 1_555 G NA . NA ? ? A G 12 A NA 205 1_555 ? ? ? ? ? ? ? 2.766 ? ? metalc5 metalc ? ? A G 20 O6 ? ? ? 1_555 C NA . NA ? ? A G 20 A NA 201 1_555 ? ? ? ? ? ? ? 2.524 ? ? metalc6 metalc ? ? A G 68 N7 ? ? ? 1_555 D NA . NA ? ? A G 68 A NA 202 1_555 ? ? ? ? ? ? ? 2.840 ? ? metalc7 metalc ? ? A G 69 O6 ? ? ? 1_555 D NA . NA ? ? A G 69 A NA 202 1_555 ? ? ? ? ? ? ? 2.932 ? ? metalc8 metalc ? ? A G 71 O6 ? ? ? 1_555 C NA . NA ? ? A G 71 A NA 201 1_555 ? ? ? ? ? ? ? 2.509 ? ? metalc9 metalc ? ? A A 72 OP2 ? ? ? 1_555 E NA . NA ? ? A A 72 A NA 203 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc10 metalc ? ? A G 73 N7 ? ? ? 1_555 E NA . NA ? ? A G 73 A NA 203 1_555 ? ? ? ? ? ? ? 2.862 ? ? metalc11 metalc ? ? A G 80 N7 ? ? ? 1_555 I NA . NA ? ? A G 80 A NA 207 1_555 ? ? ? ? ? ? ? 2.725 ? ? metalc12 metalc ? ? A A 164 OP1 ? ? ? 1_555 I NA . NA ? ? A A 164 A NA 207 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc13 metalc ? ? M LYS . OXT ? ? ? 1_555 B K . K ? ? A LYS 175 A K 200 1_555 ? ? ? ? ? ? ? 2.781 ? ? metalc14 metalc ? ? C NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 201 A HOH 326 1_555 ? ? ? ? ? ? ? 2.492 ? ? metalc15 metalc ? ? D NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 202 A HOH 312 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc16 metalc ? ? E NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 203 A HOH 315 1_555 ? ? ? ? ? ? ? 2.949 ? ? metalc17 metalc ? ? E NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 203 A HOH 322 1_555 ? ? ? ? ? ? ? 2.805 ? ? metalc18 metalc ? ? H NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 206 A HOH 311 1_555 ? ? ? ? ? ? ? 2.940 ? ? metalc19 metalc ? ? I NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 207 A HOH 329 1_555 ? ? ? ? ? ? ? 2.376 ? ? metalc20 metalc ? ? J NA . NA ? ? ? 1_555 N HOH . O ? ? A NA 208 A HOH 300 1_555 ? ? ? ? ? ? ? 2.590 ? ? hydrog1 hydrog ? ? A GDP 1 N1 ? ? ? 1_555 A CCC 174 N3 ? ? A GDP 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GDP 1 N2 ? ? ? 1_555 A CCC 174 O2 ? ? A GDP 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GDP 1 O6 ? ? ? 1_555 A CCC 174 N4 ? ? A GDP 1 A CCC 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 173 O2 ? ? A G 2 A U 173 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 173 N3 ? ? A G 2 A U 173 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 172 N1 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 172 O6 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 172 N2 ? ? A C 3 A G 172 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 171 N1 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 171 O6 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 171 N2 ? ? A C 4 A G 171 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 170 N3 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 170 O2 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 170 N4 ? ? A G 5 A C 170 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 169 N3 ? ? A A 6 A U 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 169 O4 ? ? A A 6 A U 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 168 N1 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 168 O6 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 168 N2 ? ? A C 7 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 167 N3 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 167 O2 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 167 N4 ? ? A G 8 A C 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 166 N3 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 166 O2 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 166 N4 ? ? A G 9 A C 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N1 ? ? ? 1_555 A G 165 N1 ? ? A A 10 A G 165 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog27 hydrog ? ? A A 10 N6 ? ? ? 1_555 A G 165 O6 ? ? A A 10 A G 165 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog28 hydrog ? ? A G 11 N7 ? ? ? 1_555 A G 163 N1 ? ? A G 11 A G 163 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 A G 163 N2 ? ? A G 11 A G 163 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog30 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 79 N3 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 79 O2 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 79 N4 ? ? A G 12 A C 79 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 78 N3 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 78 O2 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 78 N4 ? ? A G 14 A C 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 14 N2 ? ? ? 1_555 A A 81 N3 ? ? A G 14 A A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog37 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 77 N1 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 77 O6 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 77 N2 ? ? A C 15 A G 77 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 76 N3 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 76 O2 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 76 N4 ? ? A G 16 A C 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 17 N3 ? ? ? 1_555 A G 75 N1 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 17 N4 ? ? ? 1_555 A G 75 O6 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 17 O2 ? ? ? 1_555 A G 75 N2 ? ? A C 17 A G 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 74 N1 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 74 O6 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 74 N2 ? ? A C 18 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 19 N3 ? ? ? 1_555 A G 73 N1 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 19 N4 ? ? ? 1_555 A G 73 O6 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 19 O2 ? ? ? 1_555 A G 73 N2 ? ? A C 19 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 20 N2 ? ? ? 1_555 A A 72 N7 ? ? A G 20 A A 72 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog53 hydrog ? ? A G 20 N3 ? ? ? 1_555 A A 72 N6 ? ? A G 20 A A 72 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog54 hydrog ? ? A A 21 N6 ? ? ? 1_555 A G 71 N3 ? ? A A 21 A G 71 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog55 hydrog ? ? A A 21 N7 ? ? ? 1_555 A G 71 N2 ? ? A A 21 A G 71 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog56 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 70 N3 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 22 N2 ? ? ? 1_555 A C 70 O2 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 22 O6 ? ? ? 1_555 A C 70 N4 ? ? A G 22 A C 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A A 23 N1 ? ? ? 1_555 A G 69 N1 ? ? A A 23 A G 69 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog60 hydrog ? ? A A 23 N6 ? ? ? 1_555 A G 69 O6 ? ? A A 23 A G 69 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog61 hydrog ? ? A U 24 O2 ? ? ? 1_555 A G 69 N1 ? ? A U 24 A G 69 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog62 hydrog ? ? A G 25 N2 ? ? ? 1_555 A A 67 N7 ? ? A G 25 A A 67 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog63 hydrog ? ? A A 26 N6 ? ? ? 1_555 A A 66 N7 ? ? A A 26 A A 66 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog64 hydrog ? ? A A 26 N7 ? ? ? 1_555 A A 66 N6 ? ? A A 26 A A 66 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog65 hydrog ? ? A G 27 N2 ? ? ? 1_555 A U 28 O4 ? ? A G 27 A U 28 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog66 hydrog ? ? A U 28 N3 ? ? ? 1_555 A A 65 N7 ? ? A U 28 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog67 hydrog ? ? A U 28 O2 ? ? ? 1_555 A A 65 N6 ? ? A U 28 A A 65 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog68 hydrog ? ? A A 29 N6 ? ? ? 1_555 A G 64 N3 ? ? A A 29 A G 64 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog69 hydrog ? ? A A 29 N7 ? ? ? 1_555 A G 64 N2 ? ? A A 29 A G 64 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog70 hydrog ? ? A G 30 N1 ? ? ? 1_555 A U 63 O2 ? ? A G 30 A U 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog71 hydrog ? ? A G 30 O6 ? ? ? 1_555 A U 63 N3 ? ? A G 30 A U 63 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? A G 31 N1 ? ? ? 1_555 A C 62 N3 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 31 N2 ? ? ? 1_555 A C 62 O2 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 31 O6 ? ? ? 1_555 A C 62 N4 ? ? A G 31 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 61 N1 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 61 O6 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 61 N2 ? ? A C 32 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A U 33 N3 ? ? ? 1_555 A G 60 O6 ? ? A U 33 A G 60 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog79 hydrog ? ? A U 33 O2 ? ? ? 1_555 A G 60 N1 ? ? A U 33 A G 60 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog80 hydrog ? ? A G 34 O6 ? ? ? 1_555 A C 59 N4 ? ? A G 34 A C 59 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog81 hydrog ? ? A U 35 N3 ? ? ? 1_555 A A 58 N1 ? ? A U 35 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A U 35 O4 ? ? ? 1_555 A A 58 N6 ? ? A U 35 A A 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 36 N3 ? ? ? 1_555 A G 57 N1 ? ? A C 36 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 36 N4 ? ? ? 1_555 A G 57 O6 ? ? A C 36 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 36 O2 ? ? ? 1_555 A G 57 N2 ? ? A C 36 A G 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 37 N3 ? ? ? 1_555 A G 56 N1 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A C 37 N4 ? ? ? 1_555 A G 56 O6 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A C 37 O2 ? ? ? 1_555 A G 56 N2 ? ? A C 37 A G 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 38 N3 ? ? ? 1_555 A G 55 N1 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 55 O6 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 38 O2 ? ? ? 1_555 A G 55 N2 ? ? A C 38 A G 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A A 39 N3 ? ? ? 1_555 A C 41 N4 ? ? A A 39 A C 41 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog93 hydrog ? ? A U 40 N3 ? ? ? 1_555 A U 52 O2 ? ? A U 40 A U 52 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog94 hydrog ? ? A U 40 O2 ? ? ? 1_555 A U 52 N3 ? ? A U 40 A U 52 1_555 ? ? ? ? ? ? TYPE_13_PAIR ? ? ? hydrog95 hydrog ? ? A C 41 N3 ? ? ? 1_555 A G 54 N1 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A C 41 N4 ? ? ? 1_555 A G 54 O6 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 41 O2 ? ? ? 1_555 A G 54 N2 ? ? A C 41 A G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A A 42 N6 ? ? ? 1_555 A A 50 N1 ? ? A A 42 A A 50 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog99 hydrog ? ? A A 42 N7 ? ? ? 1_555 A A 50 N6 ? ? A A 42 A A 50 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog100 hydrog ? ? A G 44 N1 ? ? ? 1_555 A C 100 N3 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A G 44 N2 ? ? ? 1_555 A C 100 O2 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A G 44 O6 ? ? ? 1_555 A C 100 N4 ? ? A G 44 A C 100 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A G 45 N1 ? ? ? 1_555 A C 99 N3 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A G 45 N2 ? ? ? 1_555 A C 99 O2 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A G 45 O6 ? ? ? 1_555 A C 99 N4 ? ? A G 45 A C 99 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A G 46 N1 ? ? ? 1_555 A C 98 N3 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A G 46 N2 ? ? ? 1_555 A C 98 O2 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 46 O6 ? ? ? 1_555 A C 98 N4 ? ? A G 46 A C 98 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A A 47 N1 ? ? ? 1_555 A U 97 N3 ? ? A A 47 A U 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A A 47 N6 ? ? ? 1_555 A U 97 O4 ? ? A A 47 A U 97 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A G 48 N1 ? ? ? 1_555 A C 96 N3 ? ? A G 48 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A G 48 N2 ? ? ? 1_555 A C 96 O2 ? ? A G 48 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 48 O6 ? ? ? 1_555 A C 96 N4 ? ? A G 48 A C 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A G 49 N1 ? ? ? 1_555 A C 95 N3 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A G 49 N2 ? ? ? 1_555 A C 95 O2 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? A G 49 O6 ? ? ? 1_555 A C 95 N4 ? ? A G 49 A C 95 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 68 N1 ? ? ? 1_555 A A 126 N7 ? ? A G 68 A A 126 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog118 hydrog ? ? A G 68 O6 ? ? ? 1_555 A A 126 N6 ? ? A G 68 A A 126 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog119 hydrog ? ? A G 69 N2 ? ? ? 1_555 A A 127 N1 ? ? A G 69 A A 127 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog120 hydrog ? ? A G 69 N3 ? ? ? 1_555 A A 127 N6 ? ? A G 69 A A 127 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog121 hydrog ? ? A G 80 N2 ? ? ? 1_555 A A 81 N7 ? ? A G 80 A A 81 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog122 hydrog ? ? A A 82 N1 ? ? ? 1_555 A U 113 N3 ? ? A A 82 A U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A A 82 N6 ? ? ? 1_555 A U 113 O4 ? ? A A 82 A U 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A G 83 N1 ? ? ? 1_555 A C 112 N3 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A G 83 N2 ? ? ? 1_555 A C 112 O2 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A G 83 O6 ? ? ? 1_555 A C 112 N4 ? ? A G 83 A C 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A G 84 N1 ? ? ? 1_555 A C 111 N3 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A G 84 N2 ? ? ? 1_555 A C 111 O2 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A G 84 O6 ? ? ? 1_555 A C 111 N4 ? ? A G 84 A C 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A G 85 N1 ? ? ? 1_555 A U 109 O2 ? ? A G 85 A U 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog131 hydrog ? ? A G 85 O6 ? ? ? 1_555 A U 109 N3 ? ? A G 85 A U 109 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog132 hydrog ? ? A U 86 N3 ? ? ? 1_555 A A 108 N1 ? ? A U 86 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A U 86 O4 ? ? ? 1_555 A A 108 N6 ? ? A U 86 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A G 87 N1 ? ? ? 1_555 A C 107 N3 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A G 87 N2 ? ? ? 1_555 A C 107 O2 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A G 87 O6 ? ? ? 1_555 A C 107 N4 ? ? A G 87 A C 107 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A C 88 N3 ? ? ? 1_555 A G 106 N1 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A C 88 N4 ? ? ? 1_555 A G 106 O6 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A C 88 O2 ? ? ? 1_555 A G 106 N2 ? ? A C 88 A G 106 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A A 89 N1 ? ? ? 1_555 A U 105 N3 ? ? A A 89 A U 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A A 89 N6 ? ? ? 1_555 A U 105 O4 ? ? A A 89 A U 105 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A G 90 N1 ? ? ? 1_555 A C 104 N3 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A G 90 N2 ? ? ? 1_555 A C 104 O2 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A G 90 O6 ? ? ? 1_555 A C 104 N4 ? ? A G 90 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A A 91 N1 ? ? ? 1_555 A U 103 N3 ? ? A A 91 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A A 91 N6 ? ? ? 1_555 A U 103 O4 ? ? A A 91 A U 103 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 92 N1 ? ? ? 1_555 A C 102 N3 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A G 92 N2 ? ? ? 1_555 A C 102 O2 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A G 92 O6 ? ? ? 1_555 A C 102 N4 ? ? A G 92 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A U 93 N3 ? ? ? 1_555 A G 101 O6 ? ? A U 93 A G 101 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog151 hydrog ? ? A U 93 O2 ? ? ? 1_555 A G 101 N1 ? ? A U 93 A G 101 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog152 hydrog ? ? A G 114 N1 ? ? ? 1_555 A U 140 O2 ? ? A G 114 A U 140 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog153 hydrog ? ? A G 114 O6 ? ? ? 1_555 A U 140 N3 ? ? A G 114 A U 140 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog154 hydrog ? ? A G 115 N1 ? ? ? 1_555 A C 139 N3 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? A G 115 N2 ? ? ? 1_555 A C 139 O2 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog156 hydrog ? ? A G 115 O6 ? ? ? 1_555 A C 139 N4 ? ? A G 115 A C 139 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? A G 116 N1 ? ? ? 1_555 A A 138 N1 ? ? A G 116 A A 138 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog158 hydrog ? ? A G 116 O6 ? ? ? 1_555 A A 138 N6 ? ? A G 116 A A 138 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog159 hydrog ? ? A G 117 N1 ? ? ? 1_555 A C 137 N3 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? A G 117 N2 ? ? ? 1_555 A C 137 O2 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? A G 117 O6 ? ? ? 1_555 A C 137 N4 ? ? A G 117 A C 137 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? A G 118 N1 ? ? ? 1_555 A C 136 N3 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? A G 118 N2 ? ? ? 1_555 A C 136 O2 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A G 118 O6 ? ? ? 1_555 A C 136 N4 ? ? A G 118 A C 136 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? A U 119 N3 ? ? ? 1_555 A A 135 N1 ? ? A U 119 A A 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? A U 119 O4 ? ? ? 1_555 A A 135 N6 ? ? A U 119 A A 135 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? A A 120 N1 ? ? ? 1_555 A U 134 N3 ? ? A A 120 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? A A 120 N6 ? ? ? 1_555 A U 134 O4 ? ? A A 120 A U 134 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? A U 121 N3 ? ? ? 1_555 A A 133 N1 ? ? A U 121 A A 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? A U 121 O4 ? ? ? 1_555 A A 133 N6 ? ? A U 121 A A 133 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? A G 122 N1 ? ? ? 1_555 A C 132 N3 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? A G 122 N2 ? ? ? 1_555 A C 132 O2 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? A G 122 O6 ? ? ? 1_555 A C 132 N4 ? ? A G 122 A C 132 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? A G 123 N1 ? ? ? 1_555 A C 131 N3 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? A G 123 N2 ? ? ? 1_555 A C 131 O2 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? A G 123 O6 ? ? ? 1_555 A C 131 N4 ? ? A G 123 A C 131 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? A G 124 N1 ? ? ? 1_555 A C 130 N3 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog178 hydrog ? ? A G 124 N2 ? ? ? 1_555 A C 130 O2 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog179 hydrog ? ? A G 124 O6 ? ? ? 1_555 A C 130 N4 ? ? A G 124 A C 130 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? A G 125 N2 ? ? ? 1_555 A A 129 N7 ? ? A G 125 A A 129 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog181 hydrog ? ? A G 141 N1 ? ? ? 1_555 A A 162 N1 ? ? A G 141 A A 162 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog182 hydrog ? ? A G 141 O6 ? ? ? 1_555 A A 162 N6 ? ? A G 141 A A 162 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog183 hydrog ? ? A G 141 N2 ? ? ? 1_555 A G 163 O6 ? ? A G 141 A G 163 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog184 hydrog ? ? A U 142 N3 ? ? ? 1_555 A G 161 O6 ? ? A U 142 A G 161 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog185 hydrog ? ? A U 142 O2 ? ? ? 1_555 A G 161 N1 ? ? A U 142 A G 161 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog186 hydrog ? ? A C 143 N3 ? ? ? 1_555 A G 160 N1 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? A C 143 N4 ? ? ? 1_555 A G 160 O6 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog188 hydrog ? ? A C 143 O2 ? ? ? 1_555 A G 160 N2 ? ? A C 143 A G 160 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? A A 144 N1 ? ? ? 1_555 A U 159 N3 ? ? A A 144 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? A A 144 N6 ? ? ? 1_555 A U 159 O4 ? ? A A 144 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog191 hydrog ? ? A C 145 N3 ? ? ? 1_555 A G 158 N1 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? A C 145 N4 ? ? ? 1_555 A G 158 O6 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog193 hydrog ? ? A C 145 O2 ? ? ? 1_555 A G 158 N2 ? ? A C 145 A G 158 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog194 hydrog ? ? A G 146 N1 ? ? ? 1_555 A C 157 N3 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog195 hydrog ? ? A G 146 N2 ? ? ? 1_555 A C 157 O2 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog196 hydrog ? ? A G 146 O6 ? ? ? 1_555 A C 157 N4 ? ? A G 146 A C 157 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog197 hydrog ? ? A G 147 N1 ? ? ? 1_555 A C 156 N3 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog198 hydrog ? ? A G 147 N2 ? ? ? 1_555 A C 156 O2 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog199 hydrog ? ? A G 147 O6 ? ? ? 1_555 A C 156 N4 ? ? A G 147 A C 156 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog200 hydrog ? ? A A 148 N1 ? ? ? 1_555 A U 155 N3 ? ? A A 148 A U 155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog201 hydrog ? ? A A 148 N6 ? ? ? 1_555 A U 155 O4 ? ? A A 148 A U 155 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog202 hydrog ? ? A G 149 N1 ? ? ? 1_555 A C 154 N3 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog203 hydrog ? ? A G 149 N2 ? ? ? 1_555 A C 154 O2 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog204 hydrog ? ? A G 149 O6 ? ? ? 1_555 A C 154 N4 ? ? A G 149 A C 154 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A K 200 ? 1 'BINDING SITE FOR RESIDUE K A 200' AC2 Software A NA 201 ? 2 'BINDING SITE FOR RESIDUE NA A 201' AC3 Software A NA 202 ? 1 'BINDING SITE FOR RESIDUE NA A 202' AC4 Software A NA 203 ? 3 'BINDING SITE FOR RESIDUE NA A 203' AC5 Software A NA 205 ? 1 'BINDING SITE FOR RESIDUE NA A 205' AC6 Software A NA 207 ? 1 'BINDING SITE FOR RESIDUE NA A 207' AC7 Software A NA 208 ? 1 'BINDING SITE FOR RESIDUE NA A 208' AC8 Software A LYS 175 ? 1 'BINDING SITE FOR RESIDUE LYS A 175' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 LYS M . ? LYS A 175 . ? 1_555 ? 2 AC2 2 HOH N . ? HOH A 325 . ? 1_555 ? 3 AC2 2 HOH N . ? HOH A 326 . ? 1_555 ? 4 AC3 1 HOH N . ? HOH A 312 . ? 1_555 ? 5 AC4 3 HOH N . ? HOH A 315 . ? 1_555 ? 6 AC4 3 HOH N . ? HOH A 322 . ? 1_555 ? 7 AC4 3 HOH N . ? HOH A 323 . ? 1_555 ? 8 AC5 1 HOH N . ? HOH A 336 . ? 1_555 ? 9 AC6 1 HOH N . ? HOH A 329 . ? 1_555 ? 10 AC7 1 HOH N . ? HOH A 300 . ? 1_555 ? 11 AC8 1 HOH N . ? HOH A 331 . ? 1_555 ? # _database_PDB_matrix.entry_id 3DIY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 3DIY _atom_sites.fract_transf_matrix[1][1] 0.018453 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012713 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007116 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K MN N NA O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GDP 1 1 1 GDP GDP A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 C 4 4 4 C C A . n A 1 5 G 5 5 5 G G A . n A 1 6 A 6 6 6 A A A . n A 1 7 C 7 7 7 C C A . n A 1 8 G 8 8 8 G G A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 G 12 12 12 G G A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n A 1 16 G 16 16 16 G G A . n A 1 17 C 17 17 17 C C A . n A 1 18 C 18 18 18 C C A . n A 1 19 C 19 19 19 C C A . n A 1 20 G 20 20 20 G G A . n A 1 21 A 21 21 21 A A A . n A 1 22 G 22 22 22 G G A . n A 1 23 A 23 23 23 A A A . n A 1 24 U 24 24 24 U U A . n A 1 25 G 25 25 25 G G A . n A 1 26 A 26 26 26 A A A . n A 1 27 G 27 27 27 G G A . n A 1 28 U 28 28 28 U U A . n A 1 29 A 29 29 29 A A A . n A 1 30 G 30 30 30 G G A . n A 1 31 G 31 31 31 G G A . n A 1 32 C 32 32 32 C C A . n A 1 33 U 33 33 33 U U A . n A 1 34 G 34 34 34 G G A . n A 1 35 U 35 35 35 U U A . n A 1 36 C 36 36 36 C C A . n A 1 37 C 37 37 37 C C A . n A 1 38 C 38 38 38 C C A . n A 1 39 A 39 39 39 A A A . n A 1 40 U 40 40 40 U U A . n A 1 41 C 41 41 41 C C A . n A 1 42 A 42 42 42 A A A . n A 1 43 G 43 43 43 G G A . n A 1 44 G 44 44 44 G G A . n A 1 45 G 45 45 45 G G A . n A 1 46 G 46 46 46 G G A . n A 1 47 A 47 47 47 A A A . n A 1 48 G 48 48 48 G G A . n A 1 49 G 49 49 49 G G A . n A 1 50 A 50 50 50 A A A . n A 1 51 A 51 51 51 A A A . n A 1 52 U 52 52 52 U U A . n A 1 53 C 53 53 53 C C A . n A 1 54 G 54 54 54 G G A . n A 1 55 G 55 55 55 G G A . n A 1 56 G 56 56 56 G G A . n A 1 57 G 57 57 57 G G A . n A 1 58 A 58 58 58 A A A . n A 1 59 C 59 59 59 C C A . n A 1 60 G 60 60 60 G G A . n A 1 61 G 61 61 61 G G A . n A 1 62 C 62 62 62 C C A . n A 1 63 U 63 63 63 U U A . n A 1 64 G 64 64 64 G G A . n A 1 65 A 65 65 65 A A A . n A 1 66 A 66 66 66 A A A . n A 1 67 A 67 67 67 A A A . n A 1 68 G 68 68 68 G G A . n A 1 69 G 69 69 69 G G A . n A 1 70 C 70 70 70 C C A . n A 1 71 G 71 71 71 G G A . n A 1 72 A 72 72 72 A A A . n A 1 73 G 73 73 73 G G A . n A 1 74 G 74 74 74 G G A . n A 1 75 G 75 75 75 G G A . n A 1 76 C 76 76 76 C C A . n A 1 77 G 77 77 77 G G A . n A 1 78 C 78 78 78 C C A . n A 1 79 C 79 79 79 C C A . n A 1 80 G 80 80 80 G G A . n A 1 81 A 81 81 81 A A A . n A 1 82 A 82 82 82 A A A . n A 1 83 G 83 83 83 G G A . n A 1 84 G 84 84 84 G G A . n A 1 85 G 85 85 85 G G A . n A 1 86 U 86 86 86 U U A . n A 1 87 G 87 87 87 G G A . n A 1 88 C 88 88 88 C C A . n A 1 89 A 89 89 89 A A A . n A 1 90 G 90 90 90 G G A . n A 1 91 A 91 91 91 A A A . n A 1 92 G 92 92 92 G G A . n A 1 93 U 93 93 93 U U A . n A 1 94 U 94 94 94 U U A . n A 1 95 C 95 95 95 C C A . n A 1 96 C 96 96 96 C C A . n A 1 97 U 97 97 97 U U A . n A 1 98 C 98 98 98 C C A . n A 1 99 C 99 99 99 C C A . n A 1 100 C 100 100 100 C C A . n A 1 101 G 101 101 101 G G A . n A 1 102 C 102 102 102 C C A . n A 1 103 U 103 103 103 U U A . n A 1 104 C 104 104 104 C C A . n A 1 105 U 105 105 105 U U A . n A 1 106 G 106 106 106 G G A . n A 1 107 C 107 107 107 C C A . n A 1 108 A 108 108 108 A A A . n A 1 109 U 109 109 109 U U A . n A 1 110 G 110 110 110 G G A . n A 1 111 C 111 111 111 C C A . n A 1 112 C 112 112 112 C C A . n A 1 113 U 113 113 113 U U A . n A 1 114 G 114 114 114 G G A . n A 1 115 G 115 115 115 G G A . n A 1 116 G 116 116 116 G G A . n A 1 117 G 117 117 117 G G A . n A 1 118 G 118 118 118 G G A . n A 1 119 U 119 119 119 U U A . n A 1 120 A 120 120 120 A A A . n A 1 121 U 121 121 121 U U A . n A 1 122 G 122 122 122 G G A . n A 1 123 G 123 123 123 G G A . n A 1 124 G 124 124 124 G G A . n A 1 125 G 125 125 125 G G A . n A 1 126 A 126 126 126 A A A . n A 1 127 A 127 127 127 A A A . n A 1 128 U 128 128 128 U U A . n A 1 129 A 129 129 129 A A A . n A 1 130 C 130 130 130 C C A . n A 1 131 C 131 131 131 C C A . n A 1 132 C 132 132 132 C C A . n A 1 133 A 133 133 133 A A A . n A 1 134 U 134 134 134 U U A . n A 1 135 A 135 135 135 A A A . n A 1 136 C 136 136 136 C C A . n A 1 137 C 137 137 137 C C A . n A 1 138 A 138 138 138 A A A . n A 1 139 C 139 139 139 C C A . n A 1 140 U 140 140 140 U U A . n A 1 141 G 141 141 141 G G A . n A 1 142 U 142 142 142 U U A . n A 1 143 C 143 143 143 C C A . n A 1 144 A 144 144 144 A A A . n A 1 145 C 145 145 145 C C A . n A 1 146 G 146 146 146 G G A . n A 1 147 G 147 147 147 G G A . n A 1 148 A 148 148 148 A A A . n A 1 149 G 149 149 149 G G A . n A 1 150 G 150 150 150 G G A . n A 1 151 U 151 151 151 U U A . n A 1 152 C 152 152 152 C C A . n A 1 153 U 153 153 153 U U A . n A 1 154 C 154 154 154 C C A . n A 1 155 U 155 155 155 U U A . n A 1 156 C 156 156 156 C C A . n A 1 157 C 157 157 157 C C A . n A 1 158 G 158 158 158 G G A . n A 1 159 U 159 159 159 U U A . n A 1 160 G 160 160 160 G G A . n A 1 161 G 161 161 161 G G A . n A 1 162 A 162 162 162 A A A . n A 1 163 G 163 163 163 G G A . n A 1 164 A 164 164 164 A A A . n A 1 165 G 165 165 165 G G A . n A 1 166 C 166 166 166 C C A . n A 1 167 C 167 167 167 C C A . n A 1 168 G 168 168 168 G G A . n A 1 169 U 169 169 169 U U A . n A 1 170 C 170 170 170 C C A . n A 1 171 G 171 171 171 G G A . n A 1 172 G 172 172 172 G G A . n A 1 173 U 173 173 173 U U A . n A 1 174 CCC 174 174 174 CCC CCC A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 200 200 K K A . C 3 NA 1 201 201 NA NA A . D 3 NA 1 202 202 NA NA A . E 3 NA 1 203 203 NA NA A . F 3 NA 1 204 204 NA NA A . G 3 NA 1 205 205 NA NA A . H 3 NA 1 206 206 NA NA A . I 3 NA 1 207 207 NA NA A . J 3 NA 1 208 208 NA NA A . K 4 MN 1 250 250 MN MN A . L 4 MN 1 251 251 MN MN A . M 5 LYS 1 175 175 LYS LYS A . N 6 HOH 1 300 300 HOH HOH A . N 6 HOH 2 301 301 HOH HOH A . N 6 HOH 3 302 302 HOH HOH A . N 6 HOH 4 303 303 HOH HOH A . N 6 HOH 5 304 304 HOH HOH A . N 6 HOH 6 305 305 HOH HOH A . N 6 HOH 7 306 306 HOH HOH A . N 6 HOH 8 307 307 HOH HOH A . N 6 HOH 9 308 308 HOH HOH A . N 6 HOH 10 309 309 HOH HOH A . N 6 HOH 11 310 310 HOH HOH A . N 6 HOH 12 311 311 HOH HOH A . N 6 HOH 13 312 312 HOH HOH A . N 6 HOH 14 313 313 HOH HOH A . N 6 HOH 15 314 314 HOH HOH A . N 6 HOH 16 315 315 HOH HOH A . N 6 HOH 17 316 316 HOH HOH A . N 6 HOH 18 317 317 HOH HOH A . N 6 HOH 19 318 318 HOH HOH A . N 6 HOH 20 319 319 HOH HOH A . N 6 HOH 21 320 320 HOH HOH A . N 6 HOH 22 321 321 HOH HOH A . N 6 HOH 23 322 322 HOH HOH A . N 6 HOH 24 323 323 HOH HOH A . N 6 HOH 25 324 324 HOH HOH A . N 6 HOH 26 325 325 HOH HOH A . N 6 HOH 27 326 326 HOH HOH A . N 6 HOH 28 327 327 HOH HOH A . N 6 HOH 29 328 328 HOH HOH A . N 6 HOH 30 329 329 HOH HOH A . N 6 HOH 31 330 330 HOH HOH A . N 6 HOH 32 331 331 HOH HOH A . N 6 HOH 33 332 332 HOH HOH A . N 6 HOH 34 333 333 HOH HOH A . N 6 HOH 35 334 334 HOH HOH A . N 6 HOH 36 335 335 HOH HOH A . N 6 HOH 37 336 336 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GDP 1 A GDP 1 ? G "GUANOSINE-5'-DIPHOSPHATE" 2 A CCC 174 A CCC 174 ? C ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 9 ? A G 9 ? 1_555 NA ? J NA . ? A NA 208 ? 1_555 O ? N HOH . ? A HOH 300 ? 1_555 138.6 ? 2 "O2'" ? A G 11 ? A G 11 ? 1_555 K ? B K . ? A K 200 ? 1_555 OXT ? M LYS . ? A LYS 175 ? 1_555 68.7 ? 3 OP2 ? A G 11 ? A G 11 ? 1_555 NA ? G NA . ? A NA 205 ? 1_555 O6 ? A G 12 ? A G 12 ? 1_555 67.0 ? 4 O6 ? A G 20 ? A G 20 ? 1_555 NA ? C NA . ? A NA 201 ? 1_555 O6 ? A G 71 ? A G 71 ? 1_555 76.4 ? 5 O6 ? A G 20 ? A G 20 ? 1_555 NA ? C NA . ? A NA 201 ? 1_555 O ? N HOH . ? A HOH 326 ? 1_555 73.0 ? 6 O6 ? A G 71 ? A G 71 ? 1_555 NA ? C NA . ? A NA 201 ? 1_555 O ? N HOH . ? A HOH 326 ? 1_555 68.8 ? 7 N7 ? A G 68 ? A G 68 ? 1_555 NA ? D NA . ? A NA 202 ? 1_555 O6 ? A G 69 ? A G 69 ? 1_555 88.3 ? 8 N7 ? A G 68 ? A G 68 ? 1_555 NA ? D NA . ? A NA 202 ? 1_555 O ? N HOH . ? A HOH 312 ? 1_555 76.2 ? 9 O6 ? A G 69 ? A G 69 ? 1_555 NA ? D NA . ? A NA 202 ? 1_555 O ? N HOH . ? A HOH 312 ? 1_555 67.7 ? 10 OP2 ? A A 72 ? A A 72 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 N7 ? A G 73 ? A G 73 ? 1_555 84.7 ? 11 OP2 ? A A 72 ? A A 72 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O ? N HOH . ? A HOH 315 ? 1_555 136.6 ? 12 N7 ? A G 73 ? A G 73 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O ? N HOH . ? A HOH 315 ? 1_555 134.2 ? 13 OP2 ? A A 72 ? A A 72 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O ? N HOH . ? A HOH 322 ? 1_555 79.7 ? 14 N7 ? A G 73 ? A G 73 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O ? N HOH . ? A HOH 322 ? 1_555 153.5 ? 15 O ? N HOH . ? A HOH 315 ? 1_555 NA ? E NA . ? A NA 203 ? 1_555 O ? N HOH . ? A HOH 322 ? 1_555 56.9 ? 16 N7 ? A G 80 ? A G 80 ? 1_555 NA ? I NA . ? A NA 207 ? 1_555 OP1 ? A A 164 ? A A 164 ? 1_555 93.8 ? 17 N7 ? A G 80 ? A G 80 ? 1_555 NA ? I NA . ? A NA 207 ? 1_555 O ? N HOH . ? A HOH 329 ? 1_555 65.5 ? 18 OP1 ? A A 164 ? A A 164 ? 1_555 NA ? I NA . ? A NA 207 ? 1_555 O ? N HOH . ? A HOH 329 ? 1_555 92.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-16 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.value' 16 3 'Structure model' '_struct_conn.pdbx_dist_value' 17 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 29 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 30 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 29.2760 -1.9220 18.5270 0.0977 -0.0557 0.0023 0.0634 0.0204 -0.0029 1.8067 4.9210 5.0485 1.4330 1.4091 -0.6811 0.1233 0.2358 -0.1968 -0.4825 -0.0571 -0.2060 0.7162 -0.0995 -0.0662 'X-RAY DIFFRACTION' 2 ? refined 6.7770 47.1370 21.3370 0.2406 0.0160 0.2227 0.1548 -0.0324 -0.0087 1.3625 0.3026 1.7578 0.3523 0.7993 0.6135 -0.4022 -0.0440 0.6841 -0.0269 -0.0175 0.0235 -0.6996 -0.4138 0.4197 'X-RAY DIFFRACTION' 3 ? refined 8.4070 27.1710 10.8310 -0.0148 -0.0015 0.0223 0.0590 -0.0008 -0.0108 3.0855 1.3328 0.6995 -1.7065 1.1435 -0.8346 0.0802 0.1332 -0.1514 0.0269 -0.0289 0.2007 -0.0810 0.0726 -0.0513 'X-RAY DIFFRACTION' 4 ? refined 29.6560 33.7620 14.8460 -0.0249 -0.0611 -0.0212 0.0450 0.0172 0.0570 4.7922 2.7999 1.6373 -2.2392 0.8916 -0.0686 0.1151 0.4844 0.3956 -0.0912 -0.2431 -0.3034 -0.2298 0.0102 0.1279 'X-RAY DIFFRACTION' 5 ? refined 50.2110 8.6210 15.0630 0.0464 0.0202 0.2196 0.0892 0.0091 0.1362 8.6659 2.1708 2.5875 1.9908 -2.4290 1.0429 -0.3029 -0.1971 -1.0854 0.2895 -0.1811 -0.5431 0.4803 0.3467 0.4840 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 1 A 11 A 11 ? 'X-RAY DIFFRACTION' ? 2 1 A 163 A 163 A 174 A 174 ? 'X-RAY DIFFRACTION' ? 3 2 A 12 A 12 A 79 A 79 ? 'X-RAY DIFFRACTION' ? 4 3 A 80 A 80 A 113 A 113 ? 'X-RAY DIFFRACTION' ? 5 4 A 114 A 114 A 140 A 140 ? 'X-RAY DIFFRACTION' ? 6 5 A 141 A 141 A 162 A 162 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 CBASS 'data collection' . ? 2 HKL-2000 'data reduction' . ? 3 HKL-2000 'data scaling' . ? 4 REFMAC phasing . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A G 12 ? ? "C1'" A G 12 ? ? N9 A G 12 ? ? 112.89 108.50 4.39 0.70 N 2 1 "C3'" A U 52 ? ? "O3'" A U 52 ? ? P A C 53 ? ? 127.74 119.70 8.04 1.20 Y 3 1 "C1'" A U 153 ? ? "O4'" A U 153 ? ? "C4'" A U 153 ? ? 105.15 109.70 -4.55 0.70 N 4 1 "O4'" A U 153 ? ? "C1'" A U 153 ? ? N1 A U 153 ? ? 112.98 108.50 4.48 0.70 N # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id "C3'" _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id CCC _pdbx_validate_chiral.auth_seq_id 174 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details PLANAR _pdbx_validate_chiral.omega . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CCC PC P N S 73 CCC O1C O N N 74 CCC O2C O N N 75 CCC P P N N 76 CCC OP1 O N N 77 CCC OP2 O N N 78 CCC OP3 O N N 79 CCC "O5'" O N N 80 CCC "C5'" C N N 81 CCC "C4'" C N R 82 CCC "O4'" O N N 83 CCC "C3'" C N R 84 CCC "O3'" O N N 85 CCC "C2'" C N R 86 CCC "O2'" O N N 87 CCC "C1'" C N R 88 CCC N1 N N N 89 CCC C2 C N N 90 CCC O2 O N N 91 CCC N3 N N N 92 CCC C4 C N N 93 CCC N4 N N N 94 CCC C5 C N N 95 CCC C6 C N N 96 CCC HOC2 H N N 97 CCC HOP2 H N N 98 CCC HOP3 H N N 99 CCC "H5'" H N N 100 CCC "H5''" H N N 101 CCC "H4'" H N N 102 CCC "H3'" H N N 103 CCC "H2'" H N N 104 CCC "H1'" H N N 105 CCC H41 H N N 106 CCC H42 H N N 107 CCC H5 H N N 108 CCC H6 H N N 109 G OP3 O N N 110 G P P N N 111 G OP1 O N N 112 G OP2 O N N 113 G "O5'" O N N 114 G "C5'" C N N 115 G "C4'" C N R 116 G "O4'" O N N 117 G "C3'" C N S 118 G "O3'" O N N 119 G "C2'" C N R 120 G "O2'" O N N 121 G "C1'" C N R 122 G N9 N Y N 123 G C8 C Y N 124 G N7 N Y N 125 G C5 C Y N 126 G C6 C N N 127 G O6 O N N 128 G N1 N N N 129 G C2 C N N 130 G N2 N N N 131 G N3 N N N 132 G C4 C Y N 133 G HOP3 H N N 134 G HOP2 H N N 135 G "H5'" H N N 136 G "H5''" H N N 137 G "H4'" H N N 138 G "H3'" H N N 139 G "HO3'" H N N 140 G "H2'" H N N 141 G "HO2'" H N N 142 G "H1'" H N N 143 G H8 H N N 144 G H1 H N N 145 G H21 H N N 146 G H22 H N N 147 GDP PB P N N 148 GDP O1B O N N 149 GDP O2B O N N 150 GDP O3B O N N 151 GDP O3A O N N 152 GDP PA P N N 153 GDP O1A O N N 154 GDP O2A O N N 155 GDP "O5'" O N N 156 GDP "C5'" C N N 157 GDP "C4'" C N R 158 GDP "O4'" O N N 159 GDP "C3'" C N S 160 GDP "O3'" O N N 161 GDP "C2'" C N R 162 GDP "O2'" O N N 163 GDP "C1'" C N R 164 GDP N9 N Y N 165 GDP C8 C Y N 166 GDP N7 N Y N 167 GDP C5 C Y N 168 GDP C6 C N N 169 GDP O6 O N N 170 GDP N1 N N N 171 GDP C2 C N N 172 GDP N2 N N N 173 GDP N3 N N N 174 GDP C4 C Y N 175 GDP HOB2 H N N 176 GDP HOB3 H N N 177 GDP HOA2 H N N 178 GDP "H5'" H N N 179 GDP "H5''" H N N 180 GDP "H4'" H N N 181 GDP "H3'" H N N 182 GDP "HO3'" H N N 183 GDP "H2'" H N N 184 GDP "HO2'" H N N 185 GDP "H1'" H N N 186 GDP H8 H N N 187 GDP HN1 H N N 188 GDP HN21 H N N 189 GDP HN22 H N N 190 HOH O O N N 191 HOH H1 H N N 192 HOH H2 H N N 193 K K K N N 194 LYS N N N N 195 LYS CA C N S 196 LYS C C N N 197 LYS O O N N 198 LYS CB C N N 199 LYS CG C N N 200 LYS CD C N N 201 LYS CE C N N 202 LYS NZ N N N 203 LYS OXT O N N 204 LYS H H N N 205 LYS H2 H N N 206 LYS HA H N N 207 LYS HB2 H N N 208 LYS HB3 H N N 209 LYS HG2 H N N 210 LYS HG3 H N N 211 LYS HD2 H N N 212 LYS HD3 H N N 213 LYS HE2 H N N 214 LYS HE3 H N N 215 LYS HZ1 H N N 216 LYS HZ2 H N N 217 LYS HZ3 H N N 218 LYS HXT H N N 219 MN MN MN N N 220 NA NA NA N N 221 U OP3 O N N 222 U P P N N 223 U OP1 O N N 224 U OP2 O N N 225 U "O5'" O N N 226 U "C5'" C N N 227 U "C4'" C N R 228 U "O4'" O N N 229 U "C3'" C N S 230 U "O3'" O N N 231 U "C2'" C N R 232 U "O2'" O N N 233 U "C1'" C N R 234 U N1 N N N 235 U C2 C N N 236 U O2 O N N 237 U N3 N N N 238 U C4 C N N 239 U O4 O N N 240 U C5 C N N 241 U C6 C N N 242 U HOP3 H N N 243 U HOP2 H N N 244 U "H5'" H N N 245 U "H5''" H N N 246 U "H4'" H N N 247 U "H3'" H N N 248 U "HO3'" H N N 249 U "H2'" H N N 250 U "HO2'" H N N 251 U "H1'" H N N 252 U H3 H N N 253 U H5 H N N 254 U H6 H N N 255 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CCC PC O1C doub N N 76 CCC PC O2C sing N N 77 CCC PC "O3'" sing N N 78 CCC PC "O2'" sing N N 79 CCC O2C HOC2 sing N N 80 CCC P OP1 doub N N 81 CCC P OP2 sing N N 82 CCC P OP3 sing N N 83 CCC P "O5'" sing N N 84 CCC OP2 HOP2 sing N N 85 CCC OP3 HOP3 sing N N 86 CCC "O5'" "C5'" sing N N 87 CCC "C5'" "C4'" sing N N 88 CCC "C5'" "H5'" sing N N 89 CCC "C5'" "H5''" sing N N 90 CCC "C4'" "O4'" sing N N 91 CCC "C4'" "C3'" sing N N 92 CCC "C4'" "H4'" sing N N 93 CCC "O4'" "C1'" sing N N 94 CCC "C3'" "O3'" sing N N 95 CCC "C3'" "C2'" sing N N 96 CCC "C3'" "H3'" sing N N 97 CCC "C2'" "O2'" sing N N 98 CCC "C2'" "C1'" sing N N 99 CCC "C2'" "H2'" sing N N 100 CCC "C1'" N1 sing N N 101 CCC "C1'" "H1'" sing N N 102 CCC N1 C2 sing N N 103 CCC N1 C6 sing N N 104 CCC C2 O2 doub N N 105 CCC C2 N3 sing N N 106 CCC N3 C4 doub N N 107 CCC C4 N4 sing N N 108 CCC C4 C5 sing N N 109 CCC N4 H41 sing N N 110 CCC N4 H42 sing N N 111 CCC C5 C6 doub N N 112 CCC C5 H5 sing N N 113 CCC C6 H6 sing N N 114 G OP3 P sing N N 115 G OP3 HOP3 sing N N 116 G P OP1 doub N N 117 G P OP2 sing N N 118 G P "O5'" sing N N 119 G OP2 HOP2 sing N N 120 G "O5'" "C5'" sing N N 121 G "C5'" "C4'" sing N N 122 G "C5'" "H5'" sing N N 123 G "C5'" "H5''" sing N N 124 G "C4'" "O4'" sing N N 125 G "C4'" "C3'" sing N N 126 G "C4'" "H4'" sing N N 127 G "O4'" "C1'" sing N N 128 G "C3'" "O3'" sing N N 129 G "C3'" "C2'" sing N N 130 G "C3'" "H3'" sing N N 131 G "O3'" "HO3'" sing N N 132 G "C2'" "O2'" sing N N 133 G "C2'" "C1'" sing N N 134 G "C2'" "H2'" sing N N 135 G "O2'" "HO2'" sing N N 136 G "C1'" N9 sing N N 137 G "C1'" "H1'" sing N N 138 G N9 C8 sing Y N 139 G N9 C4 sing Y N 140 G C8 N7 doub Y N 141 G C8 H8 sing N N 142 G N7 C5 sing Y N 143 G C5 C6 sing N N 144 G C5 C4 doub Y N 145 G C6 O6 doub N N 146 G C6 N1 sing N N 147 G N1 C2 sing N N 148 G N1 H1 sing N N 149 G C2 N2 sing N N 150 G C2 N3 doub N N 151 G N2 H21 sing N N 152 G N2 H22 sing N N 153 G N3 C4 sing N N 154 GDP PB O1B doub N N 155 GDP PB O2B sing N N 156 GDP PB O3B sing N N 157 GDP PB O3A sing N N 158 GDP O2B HOB2 sing N N 159 GDP O3B HOB3 sing N N 160 GDP O3A PA sing N N 161 GDP PA O1A doub N N 162 GDP PA O2A sing N N 163 GDP PA "O5'" sing N N 164 GDP O2A HOA2 sing N N 165 GDP "O5'" "C5'" sing N N 166 GDP "C5'" "C4'" sing N N 167 GDP "C5'" "H5'" sing N N 168 GDP "C5'" "H5''" sing N N 169 GDP "C4'" "O4'" sing N N 170 GDP "C4'" "C3'" sing N N 171 GDP "C4'" "H4'" sing N N 172 GDP "O4'" "C1'" sing N N 173 GDP "C3'" "O3'" sing N N 174 GDP "C3'" "C2'" sing N N 175 GDP "C3'" "H3'" sing N N 176 GDP "O3'" "HO3'" sing N N 177 GDP "C2'" "O2'" sing N N 178 GDP "C2'" "C1'" sing N N 179 GDP "C2'" "H2'" sing N N 180 GDP "O2'" "HO2'" sing N N 181 GDP "C1'" N9 sing N N 182 GDP "C1'" "H1'" sing N N 183 GDP N9 C8 sing Y N 184 GDP N9 C4 sing Y N 185 GDP C8 N7 doub Y N 186 GDP C8 H8 sing N N 187 GDP N7 C5 sing Y N 188 GDP C5 C6 sing N N 189 GDP C5 C4 doub Y N 190 GDP C6 O6 doub N N 191 GDP C6 N1 sing N N 192 GDP N1 C2 sing N N 193 GDP N1 HN1 sing N N 194 GDP C2 N2 sing N N 195 GDP C2 N3 doub N N 196 GDP N2 HN21 sing N N 197 GDP N2 HN22 sing N N 198 GDP N3 C4 sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 LYS N CA sing N N 202 LYS N H sing N N 203 LYS N H2 sing N N 204 LYS CA C sing N N 205 LYS CA CB sing N N 206 LYS CA HA sing N N 207 LYS C O doub N N 208 LYS C OXT sing N N 209 LYS CB CG sing N N 210 LYS CB HB2 sing N N 211 LYS CB HB3 sing N N 212 LYS CG CD sing N N 213 LYS CG HG2 sing N N 214 LYS CG HG3 sing N N 215 LYS CD CE sing N N 216 LYS CD HD2 sing N N 217 LYS CD HD3 sing N N 218 LYS CE NZ sing N N 219 LYS CE HE2 sing N N 220 LYS CE HE3 sing N N 221 LYS NZ HZ1 sing N N 222 LYS NZ HZ2 sing N N 223 LYS NZ HZ3 sing N N 224 LYS OXT HXT sing N N 225 U OP3 P sing N N 226 U OP3 HOP3 sing N N 227 U P OP1 doub N N 228 U P OP2 sing N N 229 U P "O5'" sing N N 230 U OP2 HOP2 sing N N 231 U "O5'" "C5'" sing N N 232 U "C5'" "C4'" sing N N 233 U "C5'" "H5'" sing N N 234 U "C5'" "H5''" sing N N 235 U "C4'" "O4'" sing N N 236 U "C4'" "C3'" sing N N 237 U "C4'" "H4'" sing N N 238 U "O4'" "C1'" sing N N 239 U "C3'" "O3'" sing N N 240 U "C3'" "C2'" sing N N 241 U "C3'" "H3'" sing N N 242 U "O3'" "HO3'" sing N N 243 U "C2'" "O2'" sing N N 244 U "C2'" "C1'" sing N N 245 U "C2'" "H2'" sing N N 246 U "O2'" "HO2'" sing N N 247 U "C1'" N1 sing N N 248 U "C1'" "H1'" sing N N 249 U N1 C2 sing N N 250 U N1 C6 sing N N 251 U C2 O2 doub N N 252 U C2 N3 sing N N 253 U N3 C4 sing N N 254 U N3 H3 sing N N 255 U C4 O4 doub N N 256 U C4 C5 sing N N 257 U C5 C6 doub N N 258 U C5 H5 sing N N 259 U C6 H6 sing N N 260 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 3DIY 'double helix' 3DIY 'a-form double helix' 3DIY 'hairpin loop' 3DIY 'bulge loop' 3DIY 'mismatched base pair' 3DIY 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GDP 1 1_555 A CCC 174 1_555 -0.254 -0.214 0.375 3.040 -3.840 -5.779 1 A_GDP1:CCC174_A A 1 ? A 174 ? 19 1 1 A G 2 1_555 A U 173 1_555 -2.304 -0.259 0.411 7.001 -18.967 6.823 2 A_G2:U173_A A 2 ? A 173 ? 28 1 1 A C 3 1_555 A G 172 1_555 0.185 -0.101 0.323 4.434 -19.450 3.697 3 A_C3:G172_A A 3 ? A 172 ? 19 1 1 A C 4 1_555 A G 171 1_555 0.332 -0.119 0.173 0.449 -11.718 0.256 4 A_C4:G171_A A 4 ? A 171 ? 19 1 1 A G 5 1_555 A C 170 1_555 -0.075 -0.259 0.228 0.151 -11.752 -2.063 5 A_G5:C170_A A 5 ? A 170 ? 19 1 1 A A 6 1_555 A U 169 1_555 0.231 0.036 0.181 7.229 -13.957 -2.065 6 A_A6:U169_A A 6 ? A 169 ? 20 1 1 A C 7 1_555 A G 168 1_555 0.079 -0.144 0.147 7.352 -21.159 2.839 7 A_C7:G168_A A 7 ? A 168 ? 19 1 1 A G 8 1_555 A C 167 1_555 -0.341 -0.294 -0.019 -8.286 -17.907 1.030 8 A_G8:C167_A A 8 ? A 167 ? 19 1 1 A G 9 1_555 A C 166 1_555 0.039 -0.041 -0.061 -19.023 -18.169 0.512 9 A_G9:C166_A A 9 ? A 166 ? 19 1 1 A A 10 1_555 A G 165 1_555 -0.097 1.480 0.174 -15.114 -6.725 -15.457 10 A_A10:G165_A A 10 ? A 165 ? 8 1 1 A G 11 1_555 A G 163 1_555 -5.501 -0.164 -0.170 -6.888 1.390 -114.187 11 A_G11:G163_A A 11 ? A 163 ? 7 ? 1 A G 12 1_555 A C 79 1_555 -0.414 -0.205 -0.809 7.335 22.661 -6.378 12 A_G12:C79_A A 12 ? A 79 ? 19 1 1 A G 14 1_555 A C 78 1_555 -0.278 -0.233 -0.079 -4.159 -11.732 1.976 13 A_G14:C78_A A 14 ? A 78 ? 19 1 1 A C 15 1_555 A G 77 1_555 0.184 -0.063 -0.006 4.729 -12.898 4.019 14 A_C15:G77_A A 15 ? A 77 ? 19 1 1 A G 16 1_555 A C 76 1_555 -0.188 -0.165 -0.133 0.161 -12.902 0.563 15 A_G16:C76_A A 16 ? A 76 ? 19 1 1 A C 17 1_555 A G 75 1_555 0.197 -0.391 -0.116 3.359 -13.142 -3.959 16 A_C17:G75_A A 17 ? A 75 ? 19 1 1 A C 18 1_555 A G 74 1_555 0.222 -0.327 0.098 -4.532 -9.651 -2.959 17 A_C18:G74_A A 18 ? A 74 ? 19 1 1 A C 19 1_555 A G 73 1_555 0.299 -0.018 -0.232 1.736 -0.579 0.476 18 A_C19:G73_A A 19 ? A 73 ? 19 1 1 A G 20 1_555 A A 72 1_555 6.578 -4.295 -0.314 -18.716 -17.877 2.529 19 A_G20:A72_A A 20 ? A 72 ? 11 9 1 A A 21 1_555 A G 71 1_555 -6.810 -4.563 -0.079 -2.542 -8.256 -7.214 20 A_A21:G71_A A 21 ? A 71 ? 11 10 1 A G 22 1_555 A C 70 1_555 -0.390 -0.256 -0.331 -1.289 -5.193 -2.656 21 A_G22:C70_A A 22 ? A 70 ? 19 1 1 A A 23 1_555 A G 69 1_555 0.109 1.536 -0.738 -8.677 -6.074 -12.442 22 A_A23:G69_A A 23 ? A 69 ? 8 ? 1 A A 126 1_555 A G 68 1_555 -0.323 -4.696 0.953 -17.619 -35.147 83.321 23 A_A126:G68_A A 126 ? A 68 ? 9 3 1 A G 25 1_555 A A 67 1_555 6.983 -4.762 -0.138 -5.155 -15.707 -11.303 24 A_G25:A67_A A 25 ? A 67 ? ? 10 1 A A 26 1_555 A A 66 1_555 -5.896 5.236 -0.084 -14.963 2.095 -171.308 25 A_A26:A66_A A 26 ? A 66 ? 2 8 1 A U 28 1_555 A A 65 1_555 4.123 -2.107 -0.233 2.989 -13.392 -102.206 26 A_U28:A65_A A 28 ? A 65 ? 24 4 1 A A 29 1_555 A G 64 1_555 -6.794 -4.358 -0.278 2.200 -6.871 -5.211 27 A_A29:G64_A A 29 ? A 64 ? 11 10 1 A G 30 1_555 A U 63 1_555 -2.186 -0.597 -0.135 2.680 -15.302 -4.571 28 A_G30:U63_A A 30 ? A 63 ? 28 ? 1 A G 31 1_555 A C 62 1_555 -0.096 -0.002 -0.630 -3.890 -15.406 -4.209 29 A_G31:C62_A A 31 ? A 62 ? 19 1 1 A C 32 1_555 A G 61 1_555 -0.451 -0.155 -0.044 -1.528 -11.082 -1.035 30 A_C32:G61_A A 32 ? A 61 ? 19 1 1 A U 33 1_555 A G 60 1_555 2.971 -0.325 -0.355 -1.305 -15.070 -5.683 31 A_U33:G60_A A 33 ? A 60 ? 28 ? 1 A G 34 1_555 A C 59 1_555 -1.158 0.278 -0.073 -10.640 -14.109 -4.787 32 A_G34:C59_A A 34 ? A 59 ? ? ? 1 A U 35 1_555 A A 58 1_555 0.372 -0.031 0.273 -2.273 -3.617 -3.611 33 A_U35:A58_A A 35 ? A 58 ? 20 1 1 A C 36 1_555 A G 57 1_555 0.071 0.000 -0.452 11.936 -13.035 -2.948 34 A_C36:G57_A A 36 ? A 57 ? 19 1 1 A C 37 1_555 A G 56 1_555 -0.150 0.187 0.325 -5.210 -5.289 6.465 35 A_C37:G56_A A 37 ? A 56 ? 19 1 1 A C 38 1_555 A G 55 1_555 -0.045 0.010 -0.122 0.435 3.585 -0.445 36 A_C38:G55_A A 38 ? A 55 ? 19 1 1 A C 41 1_555 A G 54 1_555 -0.785 0.118 0.300 -14.994 9.063 -0.047 37 A_C41:G54_A A 41 ? A 54 ? 19 1 1 A U 52 1_555 A U 40 1_555 2.226 3.335 0.126 15.894 20.880 177.080 38 A_U52:U40_A A 52 ? A 40 ? 13 2 1 A A 42 1_555 A A 50 1_555 -4.836 0.482 0.114 24.133 11.056 -102.796 39 A_A42:A50_A A 42 ? A 50 ? 5 4 1 A C 95 1_555 A G 49 1_555 0.307 -0.027 -0.146 13.515 -18.899 3.124 40 A_C95:G49_A A 95 ? A 49 ? 19 1 1 A C 96 1_555 A G 48 1_555 -0.142 -0.150 0.020 5.302 -13.243 -1.098 41 A_C96:G48_A A 96 ? A 48 ? 19 1 1 A U 97 1_555 A A 47 1_555 -0.133 -0.063 -0.522 14.511 -8.509 2.210 42 A_U97:A47_A A 97 ? A 47 ? 20 1 1 A C 98 1_555 A G 46 1_555 0.212 -0.225 -0.043 3.523 -0.203 -1.935 43 A_C98:G46_A A 98 ? A 46 ? 19 1 1 A C 99 1_555 A G 45 1_555 0.546 -0.146 -0.298 7.834 -2.763 -0.729 44 A_C99:G45_A A 99 ? A 45 ? 19 1 1 A C 100 1_555 A G 44 1_555 0.679 -0.182 0.053 3.851 -12.015 4.311 45 A_C100:G44_A A 100 ? A 44 ? 19 1 1 A G 101 1_555 A U 93 1_555 -2.266 -0.554 -0.086 4.533 -6.649 -5.634 46 A_G101:U93_A A 101 ? A 93 ? 28 ? 1 A C 102 1_555 A G 92 1_555 -0.385 -0.249 -0.312 12.857 -23.590 -3.065 47 A_C102:G92_A A 102 ? A 92 ? 19 1 1 A U 103 1_555 A A 91 1_555 -0.215 -0.094 -0.015 2.554 -12.071 4.886 48 A_U103:A91_A A 103 ? A 91 ? 20 1 1 A C 104 1_555 A G 90 1_555 0.458 -0.193 -0.011 2.526 -11.015 0.114 49 A_C104:G90_A A 104 ? A 90 ? 19 1 1 A U 105 1_555 A A 89 1_555 -0.208 -0.092 -0.009 0.629 -11.613 2.679 50 A_U105:A89_A A 105 ? A 89 ? 20 1 1 A G 106 1_555 A C 88 1_555 0.153 -0.186 -0.153 -4.255 -13.888 -3.510 51 A_G106:C88_A A 106 ? A 88 ? 19 1 1 A C 107 1_555 A G 87 1_555 0.397 -0.327 0.043 -0.123 -15.584 1.590 52 A_C107:G87_A A 107 ? A 87 ? 19 1 1 A A 108 1_555 A U 86 1_555 0.124 -0.269 0.282 -5.639 -15.648 0.480 53 A_A108:U86_A A 108 ? A 86 ? 20 1 1 A U 109 1_555 A G 85 1_555 2.189 -0.478 0.423 0.616 -7.385 0.859 54 A_U109:G85_A A 109 ? A 85 ? 28 1 1 A C 111 1_555 A G 84 1_555 0.024 -0.172 -0.195 1.003 -5.932 -0.448 55 A_C111:G84_A A 111 ? A 84 ? 19 1 1 A C 112 1_555 A G 83 1_555 0.314 -0.149 -0.095 -5.687 -7.752 2.125 56 A_C112:G83_A A 112 ? A 83 ? 19 1 1 A U 113 1_555 A A 82 1_555 0.046 -0.223 -0.452 10.979 1.662 1.690 57 A_U113:A82_A A 113 ? A 82 ? 20 1 1 A G 80 1_555 A A 81 1_555 6.457 3.057 -0.891 -25.003 43.540 15.195 58 A_G80:A81_A A 80 ? A 81 ? ? ? 1 A A 129 1_555 A G 125 1_555 -7.141 -4.277 0.490 -8.600 4.485 -10.381 59 A_A129:G125_A A 129 ? A 125 ? ? ? 1 A C 130 1_555 A G 124 1_555 0.005 -0.093 0.008 11.673 -2.739 3.579 60 A_C130:G124_A A 130 ? A 124 ? 19 1 1 A C 131 1_555 A G 123 1_555 0.288 -0.236 -0.295 11.214 -7.225 0.003 61 A_C131:G123_A A 131 ? A 123 ? 19 1 1 A C 132 1_555 A G 122 1_555 0.508 -0.201 -0.067 -0.993 -8.720 3.910 62 A_C132:G122_A A 132 ? A 122 ? 19 1 1 A A 133 1_555 A U 121 1_555 -0.019 -0.134 0.134 -2.690 -12.892 4.726 63 A_A133:U121_A A 133 ? A 121 ? 20 1 1 A U 134 1_555 A A 120 1_555 -0.018 -0.205 0.149 4.362 -14.469 2.001 64 A_U134:A120_A A 134 ? A 120 ? 20 1 1 A A 135 1_555 A U 119 1_555 0.099 -0.053 0.177 3.344 -14.665 0.757 65 A_A135:U119_A A 135 ? A 119 ? 20 1 1 A C 136 1_555 A G 118 1_555 0.495 -0.118 0.180 4.812 -19.229 2.664 66 A_C136:G118_A A 136 ? A 118 ? 19 1 1 A C 137 1_555 A G 117 1_555 -0.490 -0.273 0.561 -4.742 -14.156 -4.364 67 A_C137:G117_A A 137 ? A 117 ? 19 1 1 A A 138 1_555 A G 116 1_555 -0.272 1.407 -0.242 0.637 -8.331 -19.376 68 A_A138:G116_A A 138 ? A 116 ? 8 1 1 A C 139 1_555 A G 115 1_555 0.344 -0.083 0.004 9.072 -12.766 -1.102 69 A_C139:G115_A A 139 ? A 115 ? 19 1 1 A U 140 1_555 A G 114 1_555 2.354 -0.615 0.340 -0.911 -8.594 0.394 70 A_U140:G114_A A 140 ? A 114 ? 28 1 1 A G 141 1_555 A A 162 1_555 0.254 1.378 -0.444 -7.766 -28.688 -9.031 71 A_G141:A162_A A 141 ? A 162 ? 8 1 1 A U 142 1_555 A G 161 1_555 2.216 -0.445 0.407 -3.093 -17.425 -4.228 72 A_U142:G161_A A 142 ? A 161 ? 28 ? 1 A C 143 1_555 A G 160 1_555 -0.148 -0.178 0.209 11.654 -17.847 -4.617 73 A_C143:G160_A A 143 ? A 160 ? 19 1 1 A A 144 1_555 A U 159 1_555 -0.061 -0.251 0.866 16.964 -8.544 0.369 74 A_A144:U159_A A 144 ? A 159 ? 20 1 1 A C 145 1_555 A G 158 1_555 0.272 -0.148 -0.023 5.376 -17.111 2.662 75 A_C145:G158_A A 145 ? A 158 ? 19 1 1 A G 146 1_555 A C 157 1_555 -0.234 -0.104 0.039 3.167 -5.403 3.428 76 A_G146:C157_A A 146 ? A 157 ? 19 1 1 A G 147 1_555 A C 156 1_555 -0.278 0.119 -0.010 -6.968 -13.222 8.743 77 A_G147:C156_A A 147 ? A 156 ? 19 1 1 A A 148 1_555 A U 155 1_555 -0.285 0.049 0.044 -4.425 -2.543 -3.598 78 A_A148:U155_A A 148 ? A 155 ? 20 1 1 A G 149 1_555 A C 154 1_555 0.303 -0.042 0.175 -4.551 -13.507 -0.046 79 A_G149:C154_A A 149 ? A 154 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GDP 1 1_555 A CCC 174 1_555 A G 2 1_555 A U 173 1_555 0.370 -1.916 2.927 -2.742 4.995 28.423 -4.756 -1.248 2.515 10.046 5.514 28.977 1 AA_GDP1G2:U173CCC174_AA A 1 ? A 174 ? A 2 ? A 173 ? 1 A G 2 1_555 A U 173 1_555 A C 3 1_555 A G 172 1_555 -0.099 -1.435 3.271 -1.213 5.010 41.359 -2.533 0.014 3.086 7.061 1.710 41.665 2 AA_G2C3:G172U173_AA A 2 ? A 173 ? A 3 ? A 172 ? 1 A C 3 1_555 A G 172 1_555 A C 4 1_555 A G 171 1_555 -0.329 -1.470 3.184 0.685 8.505 33.302 -3.712 0.656 2.729 14.545 -1.171 34.348 3 AA_C3C4:G171G172_AA A 3 ? A 172 ? A 4 ? A 171 ? 1 A C 4 1_555 A G 171 1_555 A G 5 1_555 A C 170 1_555 0.594 -1.804 3.044 1.875 9.124 31.068 -4.615 -0.780 2.460 16.572 -3.406 32.402 4 AA_C4G5:C170G171_AA A 4 ? A 171 ? A 5 ? A 170 ? 1 A G 5 1_555 A C 170 1_555 A A 6 1_555 A U 169 1_555 -0.973 -2.052 3.042 -2.301 4.284 25.825 -5.544 1.589 2.746 9.479 5.091 26.271 5 AA_G5A6:U169C170_AA A 5 ? A 170 ? A 6 ? A 169 ? 1 A A 6 1_555 A U 169 1_555 A C 7 1_555 A G 168 1_555 0.665 -1.589 3.150 1.262 3.278 32.805 -3.323 -0.968 3.005 5.784 -2.227 32.988 6 AA_A6C7:G168U169_AA A 6 ? A 169 ? A 7 ? A 168 ? 1 A C 7 1_555 A G 168 1_555 A G 8 1_555 A C 167 1_555 -0.602 -2.250 3.544 -1.118 13.434 28.212 -6.579 0.919 2.283 25.781 2.146 31.208 7 AA_C7G8:C167G168_AA A 7 ? A 168 ? A 8 ? A 167 ? 1 A G 8 1_555 A C 167 1_555 A G 9 1_555 A C 166 1_555 0.522 -2.078 3.435 3.180 9.476 34.253 -4.738 -0.402 2.814 15.679 -5.262 35.640 8 AA_G8G9:C166C167_AA A 8 ? A 167 ? A 9 ? A 166 ? 1 A G 9 1_555 A C 166 1_555 A A 10 1_555 A G 165 1_555 -1.247 -1.446 3.103 2.670 -0.174 33.974 -2.441 2.524 3.006 -0.298 -4.560 34.076 9 AA_G9A10:G165C166_AA A 9 ? A 166 ? A 10 ? A 165 ? 1 A A 10 1_555 A G 165 1_555 A G 11 1_555 A G 163 1_555 1.745 3.230 0.604 74.224 -152.316 -68.553 -0.975 1.189 2.107 78.226 38.120 -171.276 10 AA_A10G11:G163G165_AA A 10 ? A 165 ? A 11 ? A 163 ? 1 A G 11 1_555 A G 163 1_555 A G 12 1_555 A C 79 1_555 -2.873 6.016 0.188 -11.284 -162.088 111.145 2.572 1.473 -3.098 -82.557 5.747 170.121 11 AA_G11G12:C79G163_AA A 11 ? A 163 ? A 12 ? A 79 ? 1 A G 12 1_555 A C 79 1_555 A G 14 1_555 A C 78 1_555 1.151 -2.205 3.834 -5.243 6.141 30.407 -5.311 -3.184 3.103 11.457 9.781 31.436 12 AA_G12G14:C78C79_AA A 12 ? A 79 ? A 14 ? A 78 ? 1 A G 14 1_555 A C 78 1_555 A C 15 1_555 A G 77 1_555 -1.161 -2.365 3.011 -2.823 1.831 25.619 -5.756 1.878 2.946 4.106 6.331 25.836 13 AA_G14C15:G77C78_AA A 14 ? A 78 ? A 15 ? A 77 ? 1 A C 15 1_555 A G 77 1_555 A G 16 1_555 A C 76 1_555 -0.392 -1.624 3.376 -0.658 9.697 27.255 -5.301 0.647 2.661 19.797 1.343 28.905 14 AA_C15G16:C76G77_AA A 15 ? A 77 ? A 16 ? A 76 ? 1 A G 16 1_555 A C 76 1_555 A C 17 1_555 A G 75 1_555 -0.564 -1.642 3.151 -2.625 3.587 36.960 -3.024 0.554 3.016 5.633 4.123 37.217 15 AA_G16C17:G75C76_AA A 16 ? A 76 ? A 17 ? A 75 ? 1 A C 17 1_555 A G 75 1_555 A C 18 1_555 A G 74 1_555 0.426 -1.709 3.443 0.306 6.155 32.648 -4.028 -0.695 3.082 10.829 -0.538 33.208 16 AA_C17C18:G74G75_AA A 17 ? A 75 ? A 18 ? A 74 ? 1 A C 18 1_555 A G 74 1_555 A C 19 1_555 A G 73 1_555 -0.031 -1.596 3.344 1.422 1.860 30.709 -3.371 0.338 3.239 3.506 -2.681 30.796 17 AA_C18C19:G73G74_AA A 18 ? A 74 ? A 19 ? A 73 ? 1 A C 19 1_555 A G 73 1_555 A G 20 1_555 A A 72 1_555 -1.385 0.885 4.536 15.293 26.856 47.644 -1.232 2.704 3.927 29.883 -17.016 56.295 18 AA_C19G20:A72G73_AA A 19 ? A 73 ? A 20 ? A 72 ? 1 A G 20 1_555 A A 72 1_555 A A 21 1_555 A G 71 1_555 -0.179 0.837 3.286 -11.314 7.326 -18.727 -4.537 -4.218 2.326 -19.562 -30.213 -23.038 19 AA_G20A21:G71A72_AA A 20 ? A 72 ? A 21 ? A 71 ? 1 A A 21 1_555 A G 71 1_555 A G 22 1_555 A C 70 1_555 1.037 -0.785 3.574 -1.475 8.102 58.171 -1.252 -1.141 3.422 8.288 1.509 58.700 20 AA_A21G22:C70G71_AA A 21 ? A 71 ? A 22 ? A 70 ? 1 A G 22 1_555 A C 70 1_555 A A 23 1_555 A G 69 1_555 -0.784 -2.210 3.488 1.990 6.736 33.076 -4.885 1.669 2.943 11.668 -3.446 33.793 21 AA_G22A23:G69C70_AA A 22 ? A 70 ? A 23 ? A 69 ? 1 A A 23 1_555 A G 69 1_555 A A 126 1_555 A G 68 1_555 -0.628 2.486 5.080 131.647 36.876 -144.894 -1.445 0.377 4.855 -18.686 66.710 -167.227 22 AA_A23A126:G68G69_AA A 23 ? A 69 ? A 126 ? A 68 ? 1 A A 126 1_555 A G 68 1_555 A G 25 1_555 A A 67 1_555 -4.804 -2.480 -3.031 127.254 -82.754 -148.674 1.051 -2.702 -2.222 41.652 64.049 -172.457 23 AA_A126G25:A67G68_AA A 126 ? A 68 ? A 25 ? A 67 ? 1 A G 25 1_555 A A 67 1_555 A A 26 1_555 A A 66 1_555 -2.674 1.862 1.606 94.894 151.874 43.437 0.255 1.759 0.745 76.182 -47.600 179.147 24 AA_G25A26:A66A67_AA A 25 ? A 67 ? A 26 ? A 66 ? 1 A A 26 1_555 A A 66 1_555 A U 28 1_555 A A 65 1_555 1.801 -2.991 0.848 125.232 120.735 3.305 -1.529 -0.869 -0.755 62.405 -64.730 173.956 25 AA_A26U28:A65A66_AA A 26 ? A 66 ? A 28 ? A 65 ? 1 A U 28 1_555 A A 65 1_555 A A 29 1_555 A G 64 1_555 4.916 -0.675 3.424 1.319 0.135 -14.507 2.544 20.524 2.973 -0.534 5.209 -14.568 26 AA_U28A29:G64A65_AA A 28 ? A 65 ? A 29 ? A 64 ? 1 A A 29 1_555 A G 64 1_555 A G 30 1_555 A U 63 1_555 0.323 -0.964 3.474 -5.356 3.036 55.372 -1.217 -0.672 3.379 3.256 5.744 55.687 27 AA_A29G30:U63G64_AA A 29 ? A 64 ? A 30 ? A 63 ? 1 A G 30 1_555 A U 63 1_555 A G 31 1_555 A C 62 1_555 -0.736 -1.911 3.555 -1.677 10.658 35.989 -4.382 0.923 2.922 16.791 2.642 37.520 28 AA_G30G31:C62U63_AA A 30 ? A 63 ? A 31 ? A 62 ? 1 A G 31 1_555 A C 62 1_555 A C 32 1_555 A G 61 1_555 0.446 -1.690 3.259 -3.832 3.064 30.651 -3.727 -1.544 3.004 5.750 7.190 31.032 29 AA_G31C32:G61C62_AA A 31 ? A 62 ? A 32 ? A 61 ? 1 A C 32 1_555 A G 61 1_555 A U 33 1_555 A G 60 1_555 0.971 -1.544 3.206 8.219 5.470 47.791 -2.281 -0.561 3.138 6.669 -10.021 48.741 30 AA_C32U33:G60G61_AA A 32 ? A 61 ? A 33 ? A 60 ? 1 A U 33 1_555 A G 60 1_555 A G 34 1_555 A C 59 1_555 0.388 -2.536 3.193 5.669 18.350 9.129 -10.942 0.202 -0.703 61.921 -19.130 21.247 31 AA_U33G34:C59G60_AA A 33 ? A 60 ? A 34 ? A 59 ? 1 A G 34 1_555 A C 59 1_555 A U 35 1_555 A A 58 1_555 -0.098 -1.588 3.178 -1.324 8.526 37.973 -3.338 -0.001 2.773 12.900 2.004 38.906 32 AA_G34U35:A58C59_AA A 34 ? A 59 ? A 35 ? A 58 ? 1 A U 35 1_555 A A 58 1_555 A C 36 1_555 A G 57 1_555 1.072 -1.498 2.797 8.020 4.614 28.489 -3.727 -0.640 2.721 9.078 -15.780 29.924 33 AA_U35C36:G57A58_AA A 35 ? A 58 ? A 36 ? A 57 ? 1 A C 36 1_555 A G 57 1_555 A C 37 1_555 A G 56 1_555 0.143 -2.184 3.672 -6.714 5.878 33.060 -4.699 -1.370 3.160 10.103 11.539 34.211 34 AA_C36C37:G56G57_AA A 36 ? A 57 ? A 37 ? A 56 ? 1 A C 37 1_555 A G 56 1_555 A C 38 1_555 A G 55 1_555 -0.305 -1.854 3.082 4.089 1.311 31.226 -3.640 1.266 2.941 2.421 -7.551 31.512 35 AA_C37C38:G55G56_AA A 37 ? A 56 ? A 38 ? A 55 ? 1 A C 38 1_555 A G 55 1_555 A C 41 1_555 A G 54 1_555 -1.575 -2.370 3.536 -4.394 4.003 39.843 -3.929 1.754 3.439 5.835 6.404 40.266 36 AA_C38C41:G54G55_AA A 38 ? A 55 ? A 41 ? A 54 ? 1 A C 41 1_555 A G 54 1_555 A U 52 1_555 A U 40 1_555 -1.058 0.612 2.680 6.368 -1.162 85.642 0.471 0.893 2.605 -0.854 -4.678 85.839 37 AA_C41U52:U40G54_AA A 41 ? A 54 ? A 52 ? A 40 ? 1 A A 42 1_555 A A 50 1_555 A C 95 1_555 A G 49 1_555 3.000 -2.331 3.243 -4.801 2.855 82.744 -1.828 -2.378 3.030 2.157 3.628 82.898 38 AA_A42C95:G49A50_AA A 42 ? A 50 ? A 95 ? A 49 ? 1 A C 95 1_555 A G 49 1_555 A C 96 1_555 A G 48 1_555 -0.808 -2.307 3.330 -5.911 12.806 27.855 -6.485 0.493 2.205 24.698 11.399 31.159 39 AA_C95C96:G48G49_AA A 95 ? A 49 ? A 96 ? A 48 ? 1 A C 96 1_555 A G 48 1_555 A U 97 1_555 A A 47 1_555 -0.134 -1.526 3.093 0.726 6.399 30.193 -3.985 0.378 2.716 12.111 -1.373 30.857 40 AA_C96U97:A47G48_AA A 96 ? A 48 ? A 97 ? A 47 ? 1 A U 97 1_555 A A 47 1_555 A C 98 1_555 A G 46 1_555 0.062 -1.909 3.489 -3.984 12.873 36.038 -4.464 -0.577 2.657 19.968 6.180 38.396 41 AA_U97C98:G46A47_AA A 97 ? A 47 ? A 98 ? A 46 ? 1 A C 98 1_555 A G 46 1_555 A C 99 1_555 A G 45 1_555 -0.559 -1.869 3.115 2.421 7.334 30.357 -4.683 1.439 2.554 13.728 -4.532 31.302 42 AA_C98C99:G45G46_AA A 98 ? A 46 ? A 99 ? A 45 ? 1 A C 99 1_555 A G 45 1_555 A C 100 1_555 A G 44 1_555 1.034 -1.996 3.166 1.259 9.746 33.761 -4.607 -1.546 2.545 16.355 -2.113 35.122 43 AA_C99C100:G44G45_AA A 99 ? A 45 ? A 100 ? A 44 ? 1 A C 100 1_555 A G 44 1_555 A G 101 1_555 A U 93 1_555 2.045 -1.096 3.212 -3.983 6.051 44.330 -1.948 -3.016 2.861 7.956 5.236 44.888 44 AA_C100G101:U93G44_AA A 100 ? A 44 ? A 101 ? A 93 ? 1 A G 101 1_555 A U 93 1_555 A C 102 1_555 A G 92 1_555 -0.185 -1.194 3.094 -1.540 7.496 37.599 -2.674 0.105 2.819 11.485 2.359 38.342 45 AA_G101C102:G92U93_AA A 101 ? A 93 ? A 102 ? A 92 ? 1 A C 102 1_555 A G 92 1_555 A U 103 1_555 A A 91 1_555 0.083 -1.532 3.507 -4.227 13.264 34.203 -4.205 -0.699 2.719 21.483 6.847 36.849 46 AA_C102U103:A91G92_AA A 102 ? A 92 ? A 103 ? A 91 ? 1 A U 103 1_555 A A 91 1_555 A C 104 1_555 A G 90 1_555 -0.184 -1.430 3.166 -1.470 6.862 33.660 -3.414 0.098 2.834 11.693 2.505 34.363 47 AA_U103C104:G90A91_AA A 103 ? A 91 ? A 104 ? A 90 ? 1 A C 104 1_555 A G 90 1_555 A U 105 1_555 A A 89 1_555 0.044 -1.874 3.245 -0.942 8.419 29.406 -5.079 -0.254 2.618 16.167 1.810 30.576 48 AA_C104U105:A89G90_AA A 104 ? A 90 ? A 105 ? A 89 ? 1 A U 105 1_555 A A 89 1_555 A G 106 1_555 A C 88 1_555 -0.892 -1.675 3.363 0.176 11.488 32.037 -4.598 1.552 2.620 20.027 -0.306 33.984 49 AA_U105G106:C88A89_AA A 105 ? A 89 ? A 106 ? A 88 ? 1 A G 106 1_555 A C 88 1_555 A C 107 1_555 A G 87 1_555 0.364 -1.673 3.153 0.046 6.744 32.058 -4.030 -0.638 2.754 12.045 -0.082 32.742 50 AA_G106C107:G87C88_AA A 106 ? A 88 ? A 107 ? A 87 ? 1 A C 107 1_555 A G 87 1_555 A A 108 1_555 A U 86 1_555 0.097 -1.599 3.207 0.150 12.381 31.939 -4.468 -0.143 2.438 21.516 -0.261 34.197 51 AA_C107A108:U86G87_AA A 107 ? A 87 ? A 108 ? A 86 ? 1 A A 108 1_555 A U 86 1_555 A U 109 1_555 A G 85 1_555 0.071 -1.066 3.118 1.621 4.773 40.239 -2.037 0.067 2.978 6.905 -2.345 40.541 52 AA_A108U109:G85U86_AA A 108 ? A 86 ? A 109 ? A 85 ? 1 A U 109 1_555 A G 85 1_555 A C 111 1_555 A G 84 1_555 -1.860 -1.466 2.925 4.622 5.978 41.456 -2.555 2.987 2.487 8.361 -6.465 42.109 53 AA_U109C111:G84G85_AA A 109 ? A 85 ? A 111 ? A 84 ? 1 A C 111 1_555 A G 84 1_555 A C 112 1_555 A G 83 1_555 -0.284 -2.007 3.441 1.287 9.510 30.979 -5.210 0.727 2.709 17.291 -2.340 32.397 54 AA_C111C112:G83G84_AA A 111 ? A 84 ? A 112 ? A 83 ? 1 A C 112 1_555 A G 83 1_555 A U 113 1_555 A A 82 1_555 0.077 -1.690 2.938 2.182 7.239 25.158 -5.338 0.317 2.366 16.160 -4.870 26.252 55 AA_C112U113:A82G83_AA A 112 ? A 83 ? A 113 ? A 82 ? 1 A U 113 1_555 A A 82 1_555 A G 80 1_555 A A 81 1_555 -4.920 0.914 3.623 119.047 91.857 -134.434 -0.953 -1.832 4.613 -46.607 60.403 -168.633 56 AA_U113G80:A81A82_AA A 113 ? A 82 ? A 80 ? A 81 ? 1 A A 129 1_555 A G 125 1_555 A C 130 1_555 A G 124 1_555 0.517 -0.836 2.766 -3.104 8.777 64.034 -1.089 -0.592 2.619 8.232 2.911 64.636 57 AA_A129C130:G124G125_AA A 129 ? A 125 ? A 130 ? A 124 ? 1 A C 130 1_555 A G 124 1_555 A C 131 1_555 A G 123 1_555 -0.233 -1.999 3.199 0.257 7.241 31.935 -4.688 0.454 2.691 12.954 -0.460 32.726 58 AA_C130C131:G123G124_AA A 130 ? A 124 ? A 131 ? A 123 ? 1 A C 131 1_555 A G 123 1_555 A C 132 1_555 A G 122 1_555 0.118 -2.108 3.540 -0.805 8.338 32.066 -5.108 -0.344 2.911 14.781 1.427 33.115 59 AA_C131C132:G122G123_AA A 131 ? A 123 ? A 132 ? A 122 ? 1 A C 132 1_555 A G 122 1_555 A A 133 1_555 A U 121 1_555 -0.561 -1.549 3.186 -1.162 10.377 28.132 -4.916 0.869 2.491 20.477 2.293 29.970 60 AA_C132A133:U121G122_AA A 132 ? A 122 ? A 133 ? A 121 ? 1 A A 133 1_555 A U 121 1_555 A U 134 1_555 A A 120 1_555 -0.392 -1.069 3.136 -0.899 6.134 29.961 -3.156 0.578 2.876 11.707 1.715 30.581 61 AA_A133U134:A120U121_AA A 133 ? A 121 ? A 134 ? A 120 ? 1 A U 134 1_555 A A 120 1_555 A A 135 1_555 A U 119 1_555 -0.145 -1.273 3.197 -1.304 11.153 33.712 -3.592 0.062 2.659 18.600 2.175 35.482 62 AA_U134A135:U119A120_AA A 134 ? A 120 ? A 135 ? A 119 ? 1 A A 135 1_555 A U 119 1_555 A C 136 1_555 A G 118 1_555 -0.102 -1.128 3.200 0.558 8.361 33.375 -3.133 0.254 2.841 14.280 -0.954 34.381 63 AA_A135C136:G118U119_AA A 135 ? A 119 ? A 136 ? A 118 ? 1 A C 136 1_555 A G 118 1_555 A C 137 1_555 A G 117 1_555 0.134 -1.613 3.344 -1.790 7.832 30.726 -4.334 -0.561 2.845 14.473 3.307 31.735 64 AA_C136C137:G117G118_AA A 136 ? A 118 ? A 137 ? A 117 ? 1 A C 137 1_555 A G 117 1_555 A A 138 1_555 A G 116 1_555 -0.569 -1.564 3.096 6.329 9.711 26.240 -5.018 2.362 2.197 20.184 -13.155 28.645 65 AA_C137A138:G116G117_AA A 137 ? A 117 ? A 138 ? A 116 ? 1 A A 138 1_555 A G 116 1_555 A C 139 1_555 A G 115 1_555 1.017 -1.455 3.062 -2.038 -2.250 34.964 -2.097 -1.974 3.084 -3.736 3.384 35.092 66 AA_A138C139:G115G116_AA A 138 ? A 116 ? A 139 ? A 115 ? 1 A C 139 1_555 A G 115 1_555 A U 140 1_555 A G 114 1_555 0.337 -1.627 3.563 -1.698 6.030 41.454 -2.937 -0.658 3.289 8.460 2.383 41.904 67 AA_C139U140:G114G115_AA A 139 ? A 115 ? A 140 ? A 114 ? 1 A U 140 1_555 A G 114 1_555 A G 141 1_555 A A 162 1_555 -0.697 -2.785 3.089 7.821 20.527 24.635 -7.111 2.067 0.453 39.522 -15.059 32.893 68 AA_U140G141:A162G114_AA A 140 ? A 114 ? A 141 ? A 162 ? 1 A G 141 1_555 A A 162 1_555 A U 142 1_555 A G 161 1_555 0.242 -0.713 3.315 -6.470 11.115 37.124 -2.364 -1.119 2.911 16.850 9.809 39.214 69 AA_G141U142:G161A162_AA A 141 ? A 162 ? A 142 ? A 161 ? 1 A U 142 1_555 A G 161 1_555 A C 143 1_555 A G 160 1_555 0.227 -1.133 2.688 3.824 7.443 24.213 -4.198 0.330 2.254 17.102 -8.786 25.598 70 AA_U142C143:G160G161_AA A 142 ? A 161 ? A 143 ? A 160 ? 1 A C 143 1_555 A G 160 1_555 A A 144 1_555 A U 159 1_555 -0.084 -1.671 2.899 -8.148 4.379 33.778 -3.347 -0.915 2.618 7.367 13.707 34.986 71 AA_C143A144:U159G160_AA A 143 ? A 160 ? A 144 ? A 159 ? 1 A A 144 1_555 A U 159 1_555 A C 145 1_555 A G 158 1_555 0.048 -1.723 3.555 6.561 7.409 34.970 -3.840 0.874 3.096 12.034 -10.657 36.302 72 AA_A144C145:G158U159_AA A 144 ? A 159 ? A 145 ? A 158 ? 1 A C 145 1_555 A G 158 1_555 A G 146 1_555 A C 157 1_555 -0.135 -1.903 3.106 -1.680 13.391 27.763 -5.733 -0.016 2.002 26.048 3.267 30.811 73 AA_C145G146:C157G158_AA A 145 ? A 158 ? A 146 ? A 157 ? 1 A G 146 1_555 A C 157 1_555 A G 147 1_555 A C 156 1_555 0.941 -1.801 3.432 3.557 10.253 32.323 -4.682 -1.050 2.831 17.802 -6.175 34.050 74 AA_G146G147:C156C157_AA A 146 ? A 157 ? A 147 ? A 156 ? 1 A G 147 1_555 A C 156 1_555 A A 148 1_555 A U 155 1_555 -1.239 -1.871 3.054 -3.780 8.105 29.927 -4.840 1.669 2.604 15.272 7.121 31.206 75 AA_G147A148:U155C156_AA A 147 ? A 156 ? A 148 ? A 155 ? 1 A A 148 1_555 A U 155 1_555 A G 149 1_555 A C 154 1_555 0.478 -1.852 3.336 1.169 4.012 31.905 -4.051 -0.656 3.101 7.260 -2.115 32.170 76 AA_A148G149:C154U155_AA A 148 ? A 155 ? A 149 ? A 154 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'SODIUM ION' NA 4 'MANGANESE (II) ION' MN 5 LYSINE LYS 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3DIL _pdbx_initial_refinement_model.details 'pdb entry 3DIL' #